| Clone Name | bags39j11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475114.1| Triticum aestivum 60s ribosomal protein L21 mRNA, partial cds Length = 519 Score = 842 bits (425), Expect = 0.0 Identities = 486/507 (95%) Strand = Plus / Plus Query: 74 aggaaggggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcg 133 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 13 aggaaggggaagatgccggcggggcacgggctgcggtcgcggacgcgcgacctgttcgcg 72 Query: 134 cggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtc 193 ||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 73 cggcccttccgtaagaaggggtacatcccgctcaccacctacctgcgcacctacaaggtc 132 Query: 194 ggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttc 253 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ggggagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttc 192 Query: 254 taccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatc 313 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 taccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatc 252 Query: 314 aacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtg 373 |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 253 aacaagcaggtcggcaacaggatcatcaagaagaggatccatgtgcgtgtggagcacgtg 312 Query: 374 cagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaag 433 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 cagccatccaggtgcaacgaggagttcctccagaggaaactcaacaatgacaagctgaan 372 Query: 434 gcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaag 493 |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 373 gcggaggccaaggcgcgtggcgaggtcatcagcacgaagaggcagccagcagggcccaag 432 Query: 494 cccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtc 553 || |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 433 cctgggttcatggtggagggcaccaccatcgagacggtcacccccatcccgtacgacgtc 492 Query: 554 gtcaacgatctcaagggtggttactag 580 |||||||||||||| |||||||||||| Sbjct: 493 gtcaacgatctcaanggtggttactag 519
>ref|NM_196917.1| Oryza sativa (japonica cultivar-group) 60S ribosomal protein L21 (OSJNBa0006L06.3), mRNA Length = 783 Score = 597 bits (301), Expect = e-167 Identities = 450/497 (90%), Gaps = 2/497 (0%) Strand = Plus / Plus Query: 85 gatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgttccg 144 |||||||||||| |||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 77 gatgccggcgggccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 136 Query: 145 gaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagcacgt 204 |||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 137 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 196 Query: 205 cgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacggccg 264 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 197 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 256 Query: 265 cacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 324 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 316 Query: 325 cggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccag 384 || ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 317 tgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccag 376 Query: 385 gtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaa 444 ||||| ||||||||||| || |||||| |||| || ||| |||| ||||| || ||||| Sbjct: 377 gtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaa 436 Query: 445 ggcccgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttca 503 ||| |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||| Sbjct: 437 ggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttca 495 Query: 504 tggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatc 563 |||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 496 tggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatc 555 Query: 564 tcaagggtggttactag 580 ||||||||||||||||| Sbjct: 556 tcaagggtggttactag 572
>gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (RPL21) mRNA, complete cds Length = 753 Score = 581 bits (293), Expect = e-162 Identities = 448/497 (90%), Gaps = 2/497 (0%) Strand = Plus / Plus Query: 85 gatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgttccg 144 ||||||||||| |||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 16 gatgccggcggaccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 75 Query: 145 gaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagcacgt 204 |||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 76 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 135 Query: 205 cgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacggccg 264 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 136 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 195 Query: 265 cacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 324 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 255 Query: 325 cggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccag 384 || ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 256 tgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccag 315 Query: 385 gtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaa 444 ||||| ||||||||||| || |||||| |||| || ||| |||| ||||| || ||||| Sbjct: 316 gtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaa 375 Query: 445 ggcccgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttca 503 ||| |||||||||||||||||||| ||||||||||| |||||| || ||||| || |||| Sbjct: 376 ggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcctggcttca 434 Query: 504 tggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatc 563 |||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 435 tggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatc 494 Query: 564 tcaagggtggttactag 580 ||||||||||||||||| Sbjct: 495 tcaagggtggttactag 511
>gb|AY105020.1| Zea mays PCO098402 mRNA sequence Length = 784 Score = 496 bits (250), Expect = e-137 Identities = 439/502 (87%) Strand = Plus / Plus Query: 81 ggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgt 140 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct: 95 ggaagatgccggcggggcacgggctgcggtcgcggacccgcgacctgttcgcgcggccct 154 Query: 141 tccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagc 200 |||| ||||||||||||||| |||||||||| |||||||||||||||||| ||||||| Sbjct: 155 tccgcaagaaggggtacatcccactcaccacgtacctgcgcacctacaagatcggcgact 214 Query: 201 acgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacg 260 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 215 acgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 274 Query: 261 gccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 320 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 gccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 334 Query: 321 aggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccat 380 |||| ||| ||||||| |||| ||||||||||||| || ||||| |||||||| | Sbjct: 335 aggttaatggccgcatcatcaggaagcggatccatgtccgcgtggagcatgtgcagccct 394 Query: 381 ccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggagg 440 || | |||| |||||||||| || ||||||| ||| |||||| |||| |||||||| | Sbjct: 395 cccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagctcaaggcggatg 454 Query: 441 ccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggt 500 |||||||||| |||||||| |||||||| ||||||||||| | || ||||| || || | Sbjct: 455 ccaaggcccgcggtgaggtgatcagcaccaagaggcagcctgtgggacccaaacctggct 514 Query: 501 tcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacg 560 ||||||| ||||| | || | ||||||||||| || || || || ||||| ||||||| Sbjct: 515 tcatggttgagggtgctacactcgagacagtcactcctattccttatgatgtggtcaacg 574 Query: 561 atctcaagggtggttactagag 582 |||||||||| ||||||||||| Sbjct: 575 atctcaagggcggttactagag 596
>gb|BT016206.1| Zea mays clone Contig39 mRNA sequence Length = 748 Score = 480 bits (242), Expect = e-132 Identities = 437/502 (87%) Strand = Plus / Plus Query: 81 ggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgt 140 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct: 59 ggaagatgccggcggggcacgggctgcggtcgcggacccgcgacctgttcgcgcggccct 118 Query: 141 tccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagc 200 |||| ||||||||||||||| | |||||||| |||||||||||||||||| ||||||| Sbjct: 119 tccgcaagaaggggtacatcccgctcaccacgtacctgcgcacctacaagatcggcgact 178 Query: 201 acgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacg 260 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 acgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 238 Query: 261 gccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 320 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 gccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 298 Query: 321 aggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccat 380 |||| ||| ||||||| |||| |||||||||||||||| ||||| |||||||| | Sbjct: 299 aggttaatggccgcatcatcaggaagcggatccatgtccgtgtggagcatgtgcagccct 358 Query: 381 ccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggagg 440 || | |||| |||||||||| || ||||||| ||| |||||| |||| |||||||| | Sbjct: 359 cccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagctcaaggcggatg 418 Query: 441 ccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggt 500 ||||| ||| |||||||| |||||||| ||||||||||| | || ||||| || || | Sbjct: 419 ccaagctccgcggtgaggtgatcagcaccaagaggcagcccgtgggacccaaacctggct 478 Query: 501 tcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacg 560 ||||||| ||||| | || | ||||||||||| || || || || ||||| ||||||| Sbjct: 479 tcatggttgagggtgctacactcgagacagtcactcctattccttatgatgtggtcaacg 538 Query: 561 atctcaagggtggttactagag 582 |||||||||| ||||||||||| Sbjct: 539 atctcaagggcggttactagag 560
>gb|AY107603.1| Zea mays PCO098394 mRNA sequence Length = 965 Score = 424 bits (214), Expect = e-115 Identities = 430/502 (85%) Strand = Plus / Plus Query: 81 ggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgt 140 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 113 ggaagatgccggcggggcacgggcttcggtcgcggacccgcgacctgttcgcgcggccgt 172 Query: 141 tccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagc 200 |||| |||||||| |||||| | |||||||| |||||||||||||||||| ||||||| Sbjct: 173 tccgcaagaagggttacatcccgctcaccacgtacctgcgcacctacaagatcggcgact 232 Query: 201 acgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacg 260 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 233 acgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 292 Query: 261 gccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 320 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 293 gccgcaccggtcgcgtctggaacgtcaccaagcgcgccatcggcgttgagatcaacaagc 352 Query: 321 aggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccat 380 |||| ||| ||||||| |||| | |||||||||||||| ||||| |||||||| | Sbjct: 353 aggttaatggccgcatcatcaggaagcgtatccatgtccgtgtggagcatgtgcagccct 412 Query: 381 ccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggagg 440 || | |||| |||||||||| | ||||||| ||| || || |||| |||| || | Sbjct: 413 cccgttgcacagaggagttccgcttgaggaaagccaagaacgatcagctcaaggttgatg 472 Query: 441 ccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggt 500 |||||| |||||| ||||| |||||||| ||||||||||| | || ||||| || || | Sbjct: 473 ccaaggaccgtggcgaggtgatcagcaccaagaggcagcctgtgggacccaaacctggct 532 Query: 501 tcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacg 560 ||||||| ||||| | || ||||||| || || || || || || ||||| || || | Sbjct: 533 tcatggttgagggtgctacacttgagaccgttactcctattccctatgatgtggtaaatg 592 Query: 561 atctcaagggtggttactagag 582 |||||||||| ||||||||||| Sbjct: 593 atctcaaggggggttactagag 614
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 381 bits (192), Expect = e-102 Identities = 228/240 (95%) Strand = Plus / Minus Query: 85 gatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgttccg 144 |||||||||||| |||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 15312 gatgccggcgggccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 15253 Query: 145 gaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagcacgt 204 |||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 15252 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 15193 Query: 205 cgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacggccg 264 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 15192 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 15133 Query: 265 cacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 324 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15132 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 15073 Score = 224 bits (113), Expect = 3e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 329 aaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccaggtgc 388 ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 14333 aaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccaggtgc 14274 Query: 389 aatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaaggcc 448 | ||||||||||| || |||||| |||| || ||| |||| ||||| || |||||||| Sbjct: 14273 actgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaaggct 14214 Query: 449 cgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttcatggt 507 |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||| Sbjct: 14213 cgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttcatggt 14155 Query: 508 ggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 14154 tgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatctcaa 14095 Query: 568 gggtggttactag 580 ||||||||||||| Sbjct: 14094 gggtggttactag 14082
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 381 bits (192), Expect = e-102 Identities = 228/240 (95%) Strand = Plus / Minus Query: 85 gatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgttccg 144 |||||||||||| |||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 16670795 gatgccggcgggccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 16670736 Query: 145 gaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagcacgt 204 |||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 16670735 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 16670676 Query: 205 cgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacggccg 264 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 16670675 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 16670616 Query: 265 cacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 324 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16670615 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 16670556 Score = 224 bits (113), Expect = 3e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 329 aaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccaggtgc 388 ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 16669816 aaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccaggtgc 16669757 Query: 389 aatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaaggcc 448 | ||||||||||| || |||||| |||| || ||| |||| ||||| || |||||||| Sbjct: 16669756 actgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaaggct 16669697 Query: 449 cgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttcatggt 507 |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||| Sbjct: 16669696 cgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttcatggt 16669638 Query: 508 ggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 16669637 tgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatctcaa 16669578 Query: 568 gggtggttactag 580 ||||||||||||| Sbjct: 16669577 gggtggttactag 16669565
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 381 bits (192), Expect = e-102 Identities = 228/240 (95%) Strand = Plus / Minus Query: 85 gatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgttccg 144 |||||||||||| |||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 16679835 gatgccggcgggccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 16679776 Query: 145 gaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagcacgt 204 |||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 16679775 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 16679716 Query: 205 cgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacggccg 264 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 16679715 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 16679656 Query: 265 cacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 324 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16679655 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 16679596 Score = 224 bits (113), Expect = 3e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 329 aaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccaggtgc 388 ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 16678856 aaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccaggtgc 16678797 Query: 389 aatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaaggcc 448 | ||||||||||| || |||||| |||| || ||| |||| ||||| || |||||||| Sbjct: 16678796 actgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaaggct 16678737 Query: 449 cgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttcatggt 507 |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||| Sbjct: 16678736 cgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttcatggt 16678678 Query: 508 ggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 16678677 tgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatctcaa 16678618 Query: 568 gggtggttactag 580 ||||||||||||| Sbjct: 16678617 gggtggttactag 16678605
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 367 bits (185), Expect = 3e-98 Identities = 230/245 (93%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccg 139 |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 2246773 gggaagatgccggcggggcacgggctgcgggcgcggacgcgcgacctcttcgcgcggccg 2246832 Query: 140 ttccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgag 199 ||||| |||||||| |||||| | ||||||||||||||| | || |||||| ||||||| Sbjct: 2246833 ttccgcaagaagggttacatcccgctcaccacctacctgaggacgtacaagatcggcgat 2246892 Query: 200 cacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccac 259 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2246893 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 2246952 Query: 260 ggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 319 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246953 ggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 2247012 Query: 320 caggt 324 ||||| Sbjct: 2247013 caggt 2247017 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 320 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 379 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 2248074 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 2248133 Query: 380 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 439 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 2248134 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 2248193 Query: 440 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 499 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 2248194 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 2248253 Query: 500 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 559 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 2248254 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 2248313 Query: 560 gatctcaagggtggttactagagcgcttgtttc 592 |||||||||||||||||||||| ||||||||| Sbjct: 2248314 gatctcaagggtggttactagaatgcttgtttc 2248346
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 367 bits (185), Expect = 3e-98 Identities = 230/245 (93%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccg 139 |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 137067 gggaagatgccggcggggcacgggctgcgggcgcggacgcgcgacctcttcgcgcggccg 137126 Query: 140 ttccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgag 199 ||||| |||||||| |||||| | ||||||||||||||| | || |||||| ||||||| Sbjct: 137127 ttccgcaagaagggttacatcccgctcaccacctacctgaggacgtacaagatcggcgat 137186 Query: 200 cacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccac 259 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 137187 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 137246 Query: 260 ggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 319 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137247 ggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 137306 Query: 320 caggt 324 ||||| Sbjct: 137307 caggt 137311 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 320 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 379 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 138368 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 138427 Query: 380 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 439 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 138428 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 138487 Query: 440 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 499 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 138488 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 138547 Query: 500 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 559 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 138548 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 138607 Query: 560 gatctcaagggtggttactagagcgcttgtttc 592 |||||||||||||||||||||| ||||||||| Sbjct: 138608 gatctcaagggtggttactagaatgcttgtttc 138640
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 367 bits (185), Expect = 3e-98 Identities = 230/245 (93%) Strand = Plus / Minus Query: 80 gggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccg 139 |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 79283 gggaagatgccggcggggcacgggctgcgggcgcggacgcgcgacctcttcgcgcggccg 79224 Query: 140 ttccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgag 199 ||||| |||||||| |||||| | ||||||||||||||| | || |||||| ||||||| Sbjct: 79223 ttccgcaagaagggttacatcccgctcaccacctacctgaggacgtacaagatcggcgat 79164 Query: 200 cacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccac 259 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 79163 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 79104 Query: 260 ggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 319 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79103 ggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 79044 Query: 320 caggt 324 ||||| Sbjct: 79043 caggt 79039 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 320 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 379 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 77982 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 77923 Query: 380 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 439 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 77922 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 77863 Query: 440 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 499 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 77862 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 77803 Query: 500 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 559 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 77802 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 77743 Query: 560 gatctcaagggtggttactagagcgcttgtttc 592 |||||||||||||||||||||| ||||||||| Sbjct: 77742 gatctcaagggtggttactagaatgcttgtttc 77710
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 367 bits (185), Expect = 3e-98 Identities = 230/245 (93%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccg 139 |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 2246785 gggaagatgccggcggggcacgggctgcgggcgcggacgcgcgacctcttcgcgcggccg 2246844 Query: 140 ttccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgag 199 ||||| |||||||| |||||| | ||||||||||||||| | || |||||| ||||||| Sbjct: 2246845 ttccgcaagaagggttacatcccgctcaccacctacctgaggacgtacaagatcggcgat 2246904 Query: 200 cacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccac 259 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2246905 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 2246964 Query: 260 ggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 319 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246965 ggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 2247024 Query: 320 caggt 324 ||||| Sbjct: 2247025 caggt 2247029 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 320 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 379 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 2248086 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 2248145 Query: 380 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 439 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 2248146 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 2248205 Query: 440 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 499 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 2248206 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 2248265 Query: 500 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 559 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 2248266 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 2248325 Query: 560 gatctcaagggtggttactagagcgcttgtttc 592 |||||||||||||||||||||| ||||||||| Sbjct: 2248326 gatctcaagggtggttactagaatgcttgtttc 2248358
>dbj|AK120267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I10, full insert sequence Length = 2007 Score = 367 bits (185), Expect = 3e-98 Identities = 230/245 (93%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccg 139 |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct: 75 gggaagatgccggcggggcacgggctgcgggcgcggacgcgcgacctcttcgcgcggccg 134 Query: 140 ttccggaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgag 199 ||||| |||||||| |||||| | ||||||||||||||| | || |||||| ||||||| Sbjct: 135 ttccgcaagaagggttacatcccgctcaccacctacctgaggacgtacaagatcggcgat 194 Query: 200 cacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccac 259 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 195 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 254 Query: 260 ggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 319 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 ggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 314 Query: 320 caggt 324 ||||| Sbjct: 315 caggt 319 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 320 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 379 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 1376 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 1435 Query: 380 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 439 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 1436 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 1495 Query: 440 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 499 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 1496 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 1555 Query: 500 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 559 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 1556 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 1615 Query: 560 gatctcaagggtggttactagagcgcttgtttc 592 |||||||||||||||||||||| ||||||||| Sbjct: 1616 gatctcaagggtggttactagaatgcttgtttc 1648
>gb|AF457939.1| Zea mays clone cho1c.pk003.g2, mRNA sequence Length = 526 Score = 301 bits (152), Expect = 2e-78 Identities = 258/292 (88%), Gaps = 1/292 (0%) Strand = Plus / Plus Query: 85 gatgccggcggggcacgggctccggtcgcggacgcgcgacctgttcgcgcggccgttccg 144 ||||||||| || ||||| || || ||||||||||||||||| |||||||| || ||||| Sbjct: 37 gatgccggctggccacggcctgcgctcgcggacgcgcgacctcttcgcgcgccccttccg 96 Query: 145 gaagaaggggtacatcgcactcaccacctacctgcgcacctacaaggtcggcgagcacgt 204 |||||||| |||||| | |||||||||||||| |||||||||||| ||||||| |||| Sbjct: 97 caagaagggctacatcccgctcaccacctacctccgcacctacaagatcggcgattacgt 156 Query: 205 cgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacggccg 264 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 157 cgatgtcaaggtgaacggcgccgtccacaaggggatgccgcacaagttctaccacggccg 216 Query: 265 cacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaac-aagcagg 323 ||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 217 caccggtcgcgtctggaacgtcaccaagcgcgccatcggcgtcgaggtcaacaaagcagg 276 Query: 324 tcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgca 375 || || ||||||| |||| | |||||||||||||| ||||| ||||| Sbjct: 277 tcaatgggcgcatcatcaggaagcgtatccatgtccgtgtggagcatgtgca 328 Score = 48.1 bits (24), Expect = 0.037 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 488 cccaagcccgggttcatggtggagggcaccacca-ttgagacagtcacacccatcccgta 546 ||||||||||| |||||||| ||||||| || || ||||||| || || ||||||| || Sbjct: 443 cccaagcccggcttcatggtcgagggcaacaacatttgagaccgtaac-tccatcccata 501 Query: 547 cgatgtcgtcaacgatctcaaggg 570 ||||| ||||| ||||||||||| Sbjct: 502 tgatgtggtcaatgatctcaaggg 525
>ref|NM_100841.2| Arabidopsis thaliana structural constituent of ribosome AT1G09690 mRNA, complete cds Length = 755 Score = 170 bits (86), Expect = 4e-39 Identities = 356/446 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| ||||| | || |||||| | ||| Sbjct: 81 ctgttcgcgaggccattcaggaagaagggttacattccactctcgacttacctgagaacc 140 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 141 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 200 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 ||||||||||||||||| || || || || ||||||||||||| || |||||| |||| Sbjct: 201 cacaagttctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggt 260 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| Sbjct: 261 gttgaagtcaacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtg 320 Query: 365 gagcacgtgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgac 424 ||||| ||||||| ||| || || |||||||||| | |||||| || ||||| Sbjct: 321 gagcatgtgcagcaatcaagatgtgctgaggagttcaagctgaggaagaagaagaatgat 380 Query: 425 aagctgaaggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagca 484 |||| ||||| | ||||| ||| ||||||| ||||||||| ||||| ||||| | Sbjct: 381 gagctcaaggctgcagccaaagccaatggtgagaccatcagcaccaagagacagcctaaa 440 Query: 485 gggcccaagcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccg 544 || ||||| || || |||||||| || || | ||| | ||||| ||||| || |||||| Sbjct: 441 ggacccaaaccaggattcatggtcgaaggaatgaccttggagactgtcactccaatcccg 500 Query: 545 tacgatgtcgtcaacgatctcaaggg 570 |||||||||||||||||||||||||| Sbjct: 501 tacgatgtcgtcaacgatctcaaggg 526
>gb|AY081656.1| Arabidopsis thaliana similar to ribosomal protein L21 (At1g09690) mRNA, complete cds Length = 538 Score = 170 bits (86), Expect = 4e-39 Identities = 356/446 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| ||||| | || |||||| | ||| Sbjct: 40 ctgttcgcgaggccattcaggaagaagggttacattccactctcgacttacctgagaacc 99 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 100 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 159 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 ||||||||||||||||| || || || || ||||||||||||| || |||||| |||| Sbjct: 160 cacaagttctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggt 219 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| Sbjct: 220 gttgaagtcaacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtg 279 Query: 365 gagcacgtgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgac 424 ||||| ||||||| ||| || || |||||||||| | |||||| || ||||| Sbjct: 280 gagcatgtgcagcaatcaagatgtgctgaggagttcaagctgaggaagaagaagaatgat 339 Query: 425 aagctgaaggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagca 484 |||| ||||| | ||||| ||| ||||||| ||||||||| ||||| ||||| | Sbjct: 340 gagctcaaggctgcagccaaagccaatggtgagaccatcagcaccaagagacagcctaaa 399 Query: 485 gggcccaagcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccg 544 || ||||| || || |||||||| || || | ||| | ||||| ||||| || |||||| Sbjct: 400 ggacccaaaccaggattcatggtcgaaggaatgaccttggagactgtcactccaatcccg 459 Query: 545 tacgatgtcgtcaacgatctcaaggg 570 |||||||||||||||||||||||||| Sbjct: 460 tacgatgtcgtcaacgatctcaaggg 485
>gb|AY059923.1| Arabidopsis thaliana Similar to ribosomal protein L21 (At1g09690; F21M12.8) mRNA, complete cds Length = 665 Score = 170 bits (86), Expect = 4e-39 Identities = 356/446 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| ||||| | || |||||| | ||| Sbjct: 81 ctgttcgcgaggccattcaggaagaagggttacattccactctcgacttacctgagaacc 140 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 141 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 200 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 ||||||||||||||||| || || || || ||||||||||||| || |||||| |||| Sbjct: 201 cacaagttctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggt 260 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| Sbjct: 261 gttgaagtcaacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtg 320 Query: 365 gagcacgtgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgac 424 ||||| ||||||| ||| || || |||||||||| | |||||| || ||||| Sbjct: 321 gagcatgtgcagcaatcaagatgtgctgaggagttcaagctgaggaagaagaagaatgat 380 Query: 425 aagctgaaggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagca 484 |||| ||||| | ||||| ||| ||||||| ||||||||| ||||| ||||| | Sbjct: 381 gagctcaaggctgcagccaaagccaatggtgagaccatcagcaccaagagacagcctaaa 440 Query: 485 gggcccaagcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccg 544 || ||||| || || |||||||| || || | ||| | ||||| ||||| || |||||| Sbjct: 441 ggacccaaaccaggattcatggtcgaaggaatgaccttggagactgtcactccaatcccg 500 Query: 545 tacgatgtcgtcaacgatctcaaggg 570 |||||||||||||||||||||||||| Sbjct: 501 tacgatgtcgtcaacgatctcaaggg 526
>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a, complete sequence Length = 53909 Score = 161 bits (81), Expect = 4e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 164 ctcaccacctacctgcgcacctacaaggtcggcgagcacgtcgacgtcaaggtgaacggc 223 |||||||||||||| || || ||| ||||||| |||||||||||| || |||||| Sbjct: 14799 ctcaccacctacctccgtacgtaccgcatcggcgactacgtcgacgtcagagttaacggc 14858 Query: 224 gccgtccacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaac 283 |||||||||||||| ||||| |||||||||||||| |||||||| || || |||||||| Sbjct: 14859 gccgtccacaagggtatgcctcacaagttctaccatggccgcaccggtcgtgtctggaat 14918 Query: 284 gtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 324 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 14919 gtcaccaagcgcgccatcggcgtcgaggtcaacaagcaggt 14959 Score = 87.7 bits (44), Expect = 4e-14 Identities = 152/188 (80%) Strand = Plus / Plus Query: 320 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 379 ||||| || |||||||| |||| |||||| || ||||| ||||| ||||| ||| |||| Sbjct: 15611 caggtgggaaaccggattatcaggaagagaattcatgtgcgtgtggagcatgtgatgcca 15670 Query: 380 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 439 ||| | |||| ||||||||||| | ||||| | || ||||| |||||||||| ||| Sbjct: 15671 tcccgttgcactgaggagttccgtctcaggaaggttaagaatgatcagctgaaggccgag 15730 Query: 440 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 499 || |||||| |||||||| |||||||| ||||||||||| || |||||||| || || Sbjct: 15731 gctaaggccaagggtgaggtgatcagcaccaagaggcagcctgctgggcccaaaccaggt 15790 Query: 500 ttcatggt 507 |||||||| Sbjct: 15791 ttcatggt 15798
>emb|BX814291.1|CNS0ADUZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 137 bits (69), Expect = 5e-29 Identities = 207/253 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| ||||| | || |||||| | ||| Sbjct: 68 ctgttcgcgaggccattcaggaagaagggttacattccactctcgacttacctgagaacc 127 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 128 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 187 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 ||||||||||||||||| || || || || ||||||||||||| || |||||| |||| Sbjct: 188 cacaagttctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggt 247 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || || |||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| Sbjct: 248 gttgaagtcgacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtg 307 Query: 365 gagcacgtgcagc 377 ||||| ||||||| Sbjct: 308 gagcatgtgcagc 320 Score = 71.9 bits (36), Expect = 3e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 394 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 453 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 570 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 454 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 513
>ref|NM_100831.2| Arabidopsis thaliana structural constituent of ribosome AT1G09590 mRNA, complete cds Length = 675 Score = 129 bits (65), Expect = 1e-26 Identities = 206/253 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| | || | || |||||| | ||| Sbjct: 54 ctgttcgcgaggcctttcaggaagaagggttacattcctctatcgacttacctgaggacc 113 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 114 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 173 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 |||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct: 174 cacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggt 233 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| Sbjct: 234 gttgaagtcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtg 293 Query: 365 gagcacgtgcagc 377 ||||| ||||||| Sbjct: 294 gagcatgtgcagc 306 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>gb|BT000775.1| Arabidopsis thaliana clone RAFL04-10-C15 (R11681) putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 672 Score = 129 bits (65), Expect = 1e-26 Identities = 206/253 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| | || | || |||||| | ||| Sbjct: 54 ctgttcgcgaggcctttcaggaagaagggttacattcctctatcgacttacctgaggacc 113 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 114 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 173 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 |||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct: 174 cacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggt 233 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| Sbjct: 234 gttgaagtcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtg 293 Query: 365 gagcacgtgcagc 377 ||||| ||||||| Sbjct: 294 gagcatgtgcagc 306 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>gb|AY059119.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 526 Score = 129 bits (65), Expect = 1e-26 Identities = 206/253 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| | || | || |||||| | ||| Sbjct: 40 ctgttcgcgaggcctttcaggaagaagggttacattcctctatcgacttacctgaggacc 99 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 100 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 159 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 |||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct: 160 cacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggt 219 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| Sbjct: 220 gttgaagtcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtg 279 Query: 365 gagcacgtgcagc 377 ||||| ||||||| Sbjct: 280 gagcatgtgcagc 292 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 366 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 425 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 426 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 482
>gb|AF370227.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 674 Score = 129 bits (65), Expect = 1e-26 Identities = 206/253 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| | || | || |||||| | ||| Sbjct: 54 ctgttcgcgaggcctttcaggaagaagggttacattcctctatcgacttacctgaggacc 113 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 114 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 173 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 |||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct: 174 cacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggt 233 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| Sbjct: 234 gttgaagtcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtg 293 Query: 365 gagcacgtgcagc 377 ||||| ||||||| Sbjct: 294 gagcatgtgcagc 306 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>emb|BX816463.1|CNS0AANS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 129 bits (65), Expect = 1e-26 Identities = 206/253 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| | || | || |||||| | ||| Sbjct: 22 ctgttcgcgaggcctttcaggaagaagggttacattcctctatcgacttacctgaggacc 81 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 82 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 141 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 |||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct: 142 cacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggt 201 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| Sbjct: 202 gttgaagtcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtg 261 Query: 365 gagcacgtgcagc 377 ||||| ||||||| Sbjct: 262 gagcatgtgcagc 274 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 348 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 407 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 408 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 464
>gb|AF092950.1|AF092950 Cyanophora paradoxa ribosomal protein L21E (rpl21) mRNA, complete cds Length = 486 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 230 cacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaacgtcacc 289 |||||||||||||| ||||| ||||||||||||||| ||| |||||||||||| ||| Sbjct: 145 cacaagggcatgcccttcaagtactaccacggccgcactggcatcgtctggaacgtgacc 204 Query: 290 aagcgcgccatcggcgtcgagatcaacaagcaggtcggcaaccggatcatcaagaagagg 349 |||||||||||||| || ||||||||||||| |||| || |||| |||||||||||| | Sbjct: 205 aagcgcgccatcggtgtggagatcaacaagcgggtccgccaccgcatcatcaagaagcgc 264 Query: 350 atccatgtccg 360 ||||| ||||| Sbjct: 265 atccacgtccg 275
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 113 bits (57), Expect = 8e-22 Identities = 165/201 (82%) Strand = Plus / Minus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| ||||| | || |||||| | ||| Sbjct: 24277 ctgttcgcgaggccattcaggaagaagggttacattccactctcgacttacctgagaacc 24218 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 24217 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 24158 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 ||||||||||||||||| || || || || ||||||||||||| || |||||| |||| Sbjct: 24157 cacaagttctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggt 24098 Query: 305 gtcgagatcaacaagcaggtc 325 || || ||||||| |||||| Sbjct: 24097 gttgaagtcaacaaacaggtc 24077 Score = 73.8 bits (37), Expect = 7e-10 Identities = 193/245 (78%) Strand = Plus / Minus Query: 326 ggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccagg 385 |||||| ||||||| | ||||||||| ||||| ||||| ||||| ||||||| ||| || Sbjct: 23547 ggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatgtgcagcaatcaaga 23488 Query: 386 tgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaag 445 || |||||||||| | |||||| || ||||| |||| ||||| | ||||| Sbjct: 23487 tgtgctgaggagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaa 23428 Query: 446 gcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatg 505 ||| ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||| Sbjct: 23427 gccaatggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatg 23368 Query: 506 gtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctc 565 || || || | ||| | ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 23367 gtcgaaggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctc 23308 Query: 566 aaggg 570 ||||| Sbjct: 23307 aaggg 23303
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 105 bits (53), Expect = 2e-19 Identities = 164/201 (81%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| |||| ||| |||||||||| ||||| | || | || |||||| | ||| Sbjct: 88191 ctgttcgcgaggcctttcaggaagaagggttacattcctctatcgacttacctgaggacc 88250 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| || |||||||| || || |||||||||| ||||| Sbjct: 88251 ttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcct 88310 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 |||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct: 88311 cacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggt 88370 Query: 305 gtcgagatcaacaagcaggtc 325 || || ||||||| |||||| Sbjct: 88371 gttgaagtcaacaaacaggtc 88391 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 451 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 510 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 89080 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 89139 Query: 511 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 567 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 89140 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 89196 Score = 44.1 bits (22), Expect = 0.58 Identities = 106/134 (79%) Strand = Plus / Minus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| ||| Sbjct: 44860 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcataacc 44801 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || | |||||||| || || Sbjct: 44800 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctattcacaagggtattcct 44741 Query: 245 cacaagttctacca 258 || ||||||||||| Sbjct: 44740 cataagttctacca 44727
>ref|NM_104563.3| Arabidopsis thaliana structural constituent of ribosome AT1G57660 mRNA, complete cds Length = 715 Score = 85.7 bits (43), Expect = 2e-13 Identities = 199/251 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 87 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 146 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 147 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 206 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| ||||| ||| | || Sbjct: 207 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggt 266 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 267 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 326 Query: 365 gagcacgtgca 375 ||||| ||||| Sbjct: 327 gagcatgtgca 337 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 486 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 538
>gb|AY091167.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 526 Score = 85.7 bits (43), Expect = 2e-13 Identities = 199/251 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 40 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 99 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 100 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 159 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| ||||| ||| | || Sbjct: 160 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggt 219 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 220 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 279 Query: 365 gagcacgtgca 375 ||||| ||||| Sbjct: 280 gagcatgtgca 290 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 439 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 491
>gb|AY050840.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 681 Score = 85.7 bits (43), Expect = 2e-13 Identities = 199/251 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 87 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 146 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 147 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 206 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| ||||| ||| | || Sbjct: 207 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggt 266 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 267 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 326 Query: 365 gagcacgtgca 375 ||||| ||||| Sbjct: 327 gagcatgtgca 337 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 486 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 538
>gb|AY086851.1| Arabidopsis thaliana clone 28545 mRNA, complete sequence Length = 627 Score = 85.7 bits (43), Expect = 2e-13 Identities = 199/251 (79%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 84 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 143 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 144 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 203 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| ||||| ||| | || Sbjct: 204 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggt 263 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 264 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 323 Query: 365 gagcacgtgca 375 ||||| ||||| Sbjct: 324 gagcatgtgca 334 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 483 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 535
>ref|NM_104579.3| Arabidopsis thaliana structural constituent of ribosome AT1G57860 mRNA, complete cds Length = 669 Score = 77.8 bits (39), Expect = 4e-11 Identities = 198/251 (78%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 78 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 137 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 138 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 197 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| || || ||| | || Sbjct: 198 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaaacgtgccgttggt 257 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 258 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 317 Query: 365 gagcacgtgca 375 ||||| ||||| Sbjct: 318 gagcatgtgca 328 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 477 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 529
>gb|BT004794.1| Arabidopsis thaliana At1g57860 gene, complete cds Length = 495 Score = 77.8 bits (39), Expect = 4e-11 Identities = 198/251 (78%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 40 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 99 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 100 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 159 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| || || ||| | || Sbjct: 160 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaaacgtgccgttggt 219 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 220 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 279 Query: 365 gagcacgtgca 375 ||||| ||||| Sbjct: 280 gagcatgtgca 290 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 439 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 491
>emb|AJ131099.1|PAB131099 Picea abies microsatellite RNA, clone PAAG5, 5' end Length = 1129 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 230 cacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaacgtcacc 289 |||||||| ||||| |||||||||||||| || ||||| || |||||||| |||||| Sbjct: 187 cacaagggtatgcctcacaagttctaccatggtcgcaccggtgttgtctggaatgtcacc 246 Query: 290 aagcgcgccatcggcgtcgagatcaacaagcaggtcggcaaccggatcatcaagaagagg 349 ||||| || ||||||||||| || ||||| ||||| | ||| ||| ||||||||||| Sbjct: 247 aagcgagcaatcggcgtcgaaatgaacaaacaggttcgtaacaagattatcaagaagaga 306 Query: 350 atccatgtccgtgttgagcacgtgca 375 || ||||| || ||||||| ||||| Sbjct: 307 attcatgtacgaattgagcatgtgca 332
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 75.8 bits (38), Expect = 2e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 46249 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 46308 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 46309 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 46368 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcg 294 || ||||||||||| || || || || ||| ||||||| ||||| ||||| Sbjct: 46369 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaagcg 46418 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 46951 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 47003
>emb|BX814226.1|CNS0AC0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 674 Score = 75.8 bits (38), Expect = 2e-10 Identities = 197/250 (78%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || || || |||| ||||| | ||| Sbjct: 46 ctgttcgcgagaccattcaggaagaagggttatattccaatctccacttacctcagaacc 105 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 106 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 165 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggc 304 || ||||||||||| || || || || ||| ||||||| ||||| ||||| ||| | || Sbjct: 166 cataagttctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggt 225 Query: 305 gtcgagatcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgtt 364 || || ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| Sbjct: 226 gttgaagtcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtg 285 Query: 365 gagcacgtgc 374 ||||| |||| Sbjct: 286 gagcatgtgc 295 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 445 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 497
>gb|AC079732.4|AC079732 Arabidopsis thaliana chromosome 1 BAC F12K22 genomic sequence, complete sequence Length = 43985 Score = 71.9 bits (36), Expect = 3e-09 Identities = 132/164 (80%) Strand = Plus / Plus Query: 125 ctgttcgcgcggccgttccggaagaaggggtacatcgcactcaccacctacctgcgcacc 184 ||||||||| | || ||| |||||||||| || || ||||| |||| ||||| | ||| Sbjct: 5573 ctgttcgcgagaccattcaggaagaagggttatattccactctccacttacctcagaacc 5632 Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 | |||||||||||| ||||||| |||||||| || || || |||||||||| ||||| Sbjct: 5633 ttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcct 5692 Query: 245 cacaagttctaccacggccgcacgggccgcgtctggaacgtcac 288 || ||||||||||| || || || || ||| ||||||| ||||| Sbjct: 5693 cataagttctaccatggtcgtactggtcgcatctggaatgtcac 5736 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 6271 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 6323
>emb|BX841874.1|CNS09Y44 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 524 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 576 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 481 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 533 Score = 52.0 bits (26), Expect = 0.002 Identities = 66/78 (84%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 182 acctacaaggtcggcgagcacgtcgacgtcaaggtgaacgg-cgccgtccacaagggcat 240 |||| |||||||||||| ||||||| |||||||| || || ||| |||||||||| || Sbjct: 132 accttcaaggtcggcgattacgtcgatgtcaaggttaatggacgctatccacaagggtat 191 Query: 241 gccgcacaagttctacca 258 ||| || ||||||||||| Sbjct: 192 gcctcataagttctacca 209
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 274 cgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 320 ||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 4996 cgtctggaacgtcactaagcgcgccatcggtgtggagataaacaagc 5042
>gb|AY310808.1| Nicotiana benthamiana clone 12-130 unknown mRNA Length = 388 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 452 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 507 |||||||||||||||||||||||||| || ||| ||||| || ||||||||||| Sbjct: 140 ggtgaggtcatcagcacaaagaggcaacctcaaggacccaaaccagggttcatggt 195
>emb|AJ718457.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-11-430, cultivar Bright Yellow 2 Length = 384 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 452 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 507 |||||||||||||||||||||||||| || ||| ||||| || ||||||||||| Sbjct: 91 ggtgaggtcatcagcacaaagaggcaacctcaaggacccaaaccagggttcatggt 146
>ref|XM_959139.1| Neurospora crassa OR74A hypothetical protein (NCU01948.1) partial mRNA Length = 483 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 |||||||| ||||| ||||||| ||||||| ||||| || ||||| ||||| ||| | Sbjct: 100 tacaaggttggcgacatcgtcgacatcaaggtcaacggtgctgtccagaagggtatggcc 159 Query: 245 cacaagttctaccacggc 262 |||||| ||||||||||| Sbjct: 160 cacaaggtctaccacggc 177
>ref|XM_329137.1| Neurospora crassa OR74A hypothetical protein (NCU01948.1) partial mRNA Length = 483 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 185 tacaaggtcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccg 244 |||||||| ||||| ||||||| ||||||| ||||| || ||||| ||||| ||| | Sbjct: 100 tacaaggttggcgacatcgtcgacatcaaggtcaacggtgctgtccagaagggtatggcc 159 Query: 245 cacaagttctaccacggc 262 |||||| ||||||||||| Sbjct: 160 cacaaggtctaccacggc 177
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 531 tcacacccatcccgtacgatgtcgtcaacgatctcaagggtg 572 |||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 13307 tcactcccatcccatacgatgtcgtcaacgacttcaagggtg 13266 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 334 gatcatcaagaagaggatccatgtccgtgttgagcacgtgcagc 377 |||||| | ||||||||||||||| | ||| ||||| ||||||| Sbjct: 13504 gatcataaggaagaggatccatgttcttgtggagcatgtgcagc 13461
>gb|DQ066307.1| Ixodes scapularis isolate IS-6-12L-52 ribosomal protein L21 mRNA, complete cds Length = 486 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 201 acgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacg 260 |||| ||||| |||| ||||| ||| |||| ||||| ||||||||||| |||||||||| Sbjct: 116 acgttgacgttaagggcaacggagccttccaaaagggtatgccgcacaaattctaccacg 175 Query: 261 gc 262 || Sbjct: 176 gc 177
>ref|XM_505036.1| Yarrowia lipolytica CLIB122, YALI0F05522g predicted mRNA Length = 486 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 228 tccacaagggcatgccgcacaagttctaccacggccg 264 |||| ||||| ||||| |||||||||||||||||||| Sbjct: 143 tccagaagggtatgccccacaagttctaccacggccg 179
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 228 tccacaagggcatgccgcacaagttctaccacggccg 264 |||| ||||| ||||| |||||||||||||||||||| Sbjct: 825816 tccagaagggtatgccccacaagttctaccacggccg 825780
>ref|XM_799307.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053507251.20) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 239 atgccgcacaagttctaccacggccgcacggg 270 ||||| ||||||| |||||||||||||||||| Sbjct: 154 atgccacacaagtactaccacggccgcacggg 185
>ref|XM_807657.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053506405.149) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 239 atgccgcacaagttctaccacggccgcacggg 270 ||||| ||||||| |||||||||||||||||| Sbjct: 154 atgccacacaagtactaccacggccgcacggg 185
>ref|XM_455019.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23727g predicted mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 228 tccacaagggcatgccgcacaagttctacca 258 |||||||||| ||||| |||||||||||||| Sbjct: 143 tccacaagggtatgccacacaagttctacca 173
>gb|DQ191668.1| Solanum tuberosum 60S ribosomal protein L21-like protein mRNA, complete cds Length = 751 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Plus Query: 230 cacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaacgtcacc 289 |||||||| ||||| |||||||||||||| || || || || || || ||||| || ||| Sbjct: 204 cacaagggaatgcctcacaagttctaccatggacgtactggtcgtgtttggaatgttacc 263 Query: 290 aagcgcgccatcggcgtcgagatcaacaagcaggt 324 || |||||| | || || || ||||||||||||| Sbjct: 264 aaacgcgccgttggtgttgaagtcaacaagcaggt 298
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 228 tccacaagggcatgccgcacaagttctacca 258 |||||||||| ||||| |||||||||||||| Sbjct: 2101982 tccacaagggtatgccacacaagttctacca 2101952
>ref|NM_190560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 303 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 gcacaagttctaccacggccgcacgg 269 ||||||||||| |||||||||||||| Sbjct: 46 gcacaagttctgccacggccgcacgg 71
>gb|AY292616.1| Oikopleura dioica 60S ribosomal protein L21 (RL21) gene, complete cds Length = 578 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 228 tccacaagggcatgccgcacaagttctaccacgg 261 |||| ||||| |||||||||||| |||||||||| Sbjct: 196 tccagaagggtatgccgcacaaggtctaccacgg 229
>ref|XM_570887.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l21-a (CNE02170) partial mRNA Length = 559 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 233 aagggcatgccgcacaagttctaccacggc 262 ||||| ||||| |||||||||||||||||| Sbjct: 162 aagggtatgccccacaagttctaccacggc 191
>ref|XM_525315.1| PREDICTED: Pan troglodytes similar to disks large-associated protein 4 isoform a; disks large associated protein 4; SAP90/PSD-95-associated protein 4; PSD-95/SAP90 binding protein 4 (LOC469930), mRNA Length = 4473 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gaggccaaggcccgtggtgag 457 ||||||||||||||||||||| Sbjct: 1645 gaggccaaggcccgtggtgag 1665
>gb|DQ207854.1| Solanum tuberosum clone 076C12 unknown mRNA Length = 725 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 cacaagggcatgccgcacaagttctacca 258 |||||||| ||||| |||||||||||||| Sbjct: 171 cacaagggaatgcctcacaagttctacca 199
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gcgcgacctgttcgcgcggcc 138 ||||||||||||||||||||| Sbjct: 893473 gcgcgacctgttcgcgcggcc 893453
>ref|NM_014902.2| Homo sapiens discs, large (Drosophila) homolog-associated protein 4 (DLGAP4), transcript variant 1, mRNA Length = 5007 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gaggccaaggcccgtggtgag 457 ||||||||||||||||||||| Sbjct: 817 gaggccaaggcccgtggtgag 837
>ref|XM_534410.2| PREDICTED: Canis familiaris similar to disks large-associated protein 4 isoform b, transcript variant 1 (LOC477219), mRNA Length = 3855 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gaggccaaggcccgtggtgag 457 ||||||||||||||||||||| Sbjct: 382 gaggccaaggcccgtggtgag 402
>ref|XM_860394.1| PREDICTED: Canis familiaris similar to disks large-associated protein 4 isoform b, transcript variant 4 (LOC477219), mRNA Length = 3846 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gaggccaaggcccgtggtgag 457 ||||||||||||||||||||| Sbjct: 382 gaggccaaggcccgtggtgag 402
>emb|AL390374.16| Human DNA sequence from clone CTD-2182L9 on chromosome 20 Contains part of a novel gene (KIAA0964) and two CpG islands, complete sequence Length = 65831 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gaggccaaggcccgtggtgag 457 ||||||||||||||||||||| Sbjct: 8548 gaggccaaggcccgtggtgag 8568
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gcgcgacctgttcgcgcggcc 138 ||||||||||||||||||||| Sbjct: 2212130 gcgcgacctgttcgcgcggcc 2212110
>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence Length = 224931 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 agagaaggcaaggaggaaggggaag 85 |||||||| |||||||||||||||| Sbjct: 191739 agagaagggaaggaggaaggggaag 191763
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 cacaagggcatgccgcacaagttctacca 258 |||||||| ||||| |||||||||||||| Sbjct: 163874 cacaagggtatgccacacaagttctacca 163902
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gcgcgacctgttcgcgcggcc 138 ||||||||||||||||||||| Sbjct: 1785554 gcgcgacctgttcgcgcggcc 1785534
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aggaggaaggggaagatgccggcgg 95 ||||||||||||||| ||||||||| Sbjct: 16111308 aggaggaaggggaagctgccggcgg 16111284
>gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 of the complete genome Length = 11398 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gacaagctgaaggcggaggcc 442 ||||||||||||||||||||| Sbjct: 6109 gacaagctgaaggcggaggcc 6089
>gb|AC114732.5| Homo sapiens BAC clone RP13-1012F16 from 2, complete sequence Length = 91526 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 agagagaaggcaaggaggaagggga 83 |||| |||||||||||||||||||| Sbjct: 69801 agagggaaggcaaggaggaagggga 69825
>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0618D11 Length = 150103 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aggaggaaggggaagatgccggcgg 95 ||||||||||||||| ||||||||| Sbjct: 140037 aggaggaaggggaagctgccggcgg 140013
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aggaggaaggggaagatgccggcgg 95 ||||||||||||||| ||||||||| Sbjct: 16101 aggaggaaggggaagctgccggcgg 16077
>dbj|AB023181.1| Homo sapiens mRNA for KIAA0964 protein, partial cds Length = 5007 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gaggccaaggcccgtggtgag 457 ||||||||||||||||||||| Sbjct: 817 gaggccaaggcccgtggtgag 837
>gb|U95739.1|HSU95739 Human chromosome 16p11.2-p12 BAC clone CIT987SK-224D6 complete sequence Length = 69015 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 agagaaggcaaggaggaaggggaag 85 |||||||| |||||||||||||||| Sbjct: 6983 agagaagggaaggaggaaggggaag 7007
>ref|NM_209960.1| Eremothecium gossypii AEL254Wp (AEL254W), mRNA Length = 483 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 cacaagggcatgccgcacaagttctacca 258 |||||||| ||||| |||||||||||||| Sbjct: 145 cacaagggtatgccacacaagttctacca 173
>emb|AL845474.6| Mouse DNA sequence from clone RP23-380N15 on chromosome 2, complete sequence Length = 41316 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gagagaaggcaaggaggaagg 80 ||||||||||||||||||||| Sbjct: 8792 gagagaaggcaaggaggaagg 8772
>emb|AL606756.17| Mouse DNA sequence from clone RP23-265O19 on chromosome 3, complete sequence Length = 193976 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 agagagaaggcaaggaggaagggga 83 |||||||||| |||||||||||||| Sbjct: 48416 agagagaagggaaggaggaagggga 48440
>ref|NM_189018.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1159 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacggg 103 |||| ||||||||||||||||||| Sbjct: 258 gggatgatgccggcggggcacggg 281
>gb|AC129554.13| Mus musculus chromosome 17, clone RP24-358N7, complete sequence Length = 182184 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gagaaggcaaggaggaaggggaag 85 ||||||| |||||||||||||||| Sbjct: 59742 gagaagggaaggaggaaggggaag 59765
>gb|AC139043.6| Mus musculus chromosome 3, clone RP23-321I11, complete sequence Length = 194537 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 gagaaggcaaggaggaaggg 81 |||||||||||||||||||| Sbjct: 116845 gagaaggcaaggaggaaggg 116826
>ref|XM_364335.1| Magnaporthe grisea 70-15 hypothetical protein (MG09180.4) partial mRNA Length = 1332 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gtcggcgagcacgtcgacgt 210 |||||||||||||||||||| Sbjct: 456 gtcggcgagcacgtcgacgt 437
>ref|XM_877380.1| PREDICTED: Bos taurus similar to tumor necrosis factor (ligand) superfamily, member 15, transcript variant 2 (LOC514239), mRNA Length = 1199 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgcactcaccacctacctgc 179 |||||||||||||||||||| Sbjct: 162 cgcactcaccacctacctgc 181
>ref|XM_592054.2| PREDICTED: Bos taurus similar to tumor necrosis factor (ligand) superfamily, member 15, transcript variant 1 (LOC514239), mRNA Length = 1208 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgcactcaccacctacctgc 179 |||||||||||||||||||| Sbjct: 162 cgcactcaccacctacctgc 181
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 agagagaaggcaaggaggaagggg 82 ||||||| |||||||||||||||| Sbjct: 490291 agagagagggcaaggaggaagggg 490268
>gb|AY555278.1| Mus musculus strain 129/SvJ chromosome 17 clone 522h13, complete sequence Length = 148334 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gagaaggcaaggaggaaggggaag 85 ||||||| |||||||||||||||| Sbjct: 131982 gagaagggaaggaggaaggggaag 132005
>ref|XM_753406.1| Ustilago maydis 521 hypothetical protein (UM02352.1) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 233 aagggcatgccgcacaagttctaccacggccg 264 ||||| ||||| ||||||| |||||||||||| Sbjct: 181 aagggtatgccccacaagtactaccacggccg 212
>ref|XM_750518.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12800) partial mRNA Length = 579 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 acgatgtcgtcaacgatctc 565 |||||||||||||||||||| Sbjct: 491 acgatgtcgtcaacgatctc 510
>gb|AC117594.8| Mus musculus chromosome 3, clone RP23-335D16, complete sequence Length = 230457 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 gagaaggcaaggaggaaggg 81 |||||||||||||||||||| Sbjct: 6726 gagaaggcaaggaggaaggg 6707
>emb|Z83851.17|HS989H11 Human DNA sequence from clone CTA-989H11 on chromosome 22q13.1-13.2, complete sequence Length = 118831 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 aggcagccagcagggcccaa 492 |||||||||||||||||||| Sbjct: 65341 aggcagccagcagggcccaa 65360
>emb|AL591521.8| Human DNA sequence from clone RP5-965F6 on chromosome 1 Contains the 5' end of a novel gene and a thioredoxin (TXN) pseudogene, complete sequence Length = 97110 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ggaaactcaacaatgacaag 427 |||||||||||||||||||| Sbjct: 35982 ggaaactcaacaatgacaag 35963
>emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chromosome 1 Contains a novel gene, complete sequence Length = 86332 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aggcaaggaggaaggggaag 85 |||||||||||||||||||| Sbjct: 19621 aggcaaggaggaaggggaag 19602
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 ggccgcacgggccgcgtctggaac 283 |||||||||||||||| ||||||| Sbjct: 1119351 ggccgcacgggccgcgactggaac 1119374
>emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on chromosome 6 Contains the 3' end of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 182982 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 aacaatgacaagctgaaggc 435 |||||||||||||||||||| Sbjct: 13208 aacaatgacaagctgaaggc 13227
>emb|AL162726.16| Human DNA sequence from clone RP11-15B24 on chromosome 9 Contains a cytochrome c oxidase III (COIII) (MTCO3) pseudogene, a novel pseudogene and three novel genes, complete sequence Length = 195824 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 agggcaccaccattgagaca 529 |||||||||||||||||||| Sbjct: 66392 agggcaccaccattgagaca 66411
>emb|AL353616.14| Human DNA sequence from clone RP11-274B18 on chromosome 9 Contains the 3' end of the PGM5 gene for phosphoglucomutase 5 (PGMRP), a novel gene (MGC34760), a squamous cell carcinoma antigen recognized by T cell (SART2) pseudogene and 2 novel genes, complete sequence Length = 169993 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ctcaacaatgacaagctgaa 432 |||||||||||||||||||| Sbjct: 126842 ctcaacaatgacaagctgaa 126861
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 acgtcaccaagcgcgccatcggcg 305 |||||||||||||||||| ||||| Sbjct: 249864 acgtcaccaagcgcgccaacggcg 249841
>ref|NM_135006.2| Drosophila melanogaster CG15634-RA (CG15634), mRNA Length = 1444 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gcaaggaggaaggggaagatgccggcgg 95 |||||||||| |||||||||||||||| Sbjct: 456 gcaaggaggagagggaagatgccggcgg 483
>gb|AC104021.5| Homo sapiens chromosome 8, clone RP11-378A12, complete sequence Length = 135998 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 actcaacaatgacaagctga 431 |||||||||||||||||||| Sbjct: 126485 actcaacaatgacaagctga 126504
>gb|AC008099.5| Drosophila melanogaster, chromosome 2L, region 25A-25A, BAC clone BACR37J18, complete sequence Length = 199916 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 gcaaggaggaaggggaagatgccggcgg 95 |||||||||| |||||||||||||||| Sbjct: 77179 gcaaggaggagagggaagatgccggcgg 77152
>gb|AY051954.1| Drosophila melanogaster LD42284 full length cDNA Length = 1449 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gcaaggaggaaggggaagatgccggcgg 95 |||||||||| |||||||||||||||| Sbjct: 442 gcaaggaggagagggaagatgccggcgg 469
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacggg 103 |||| ||||||||||||||||||| Sbjct: 25636628 gggatgatgccggcggggcacggg 25636651
>gb|AF532116.1| Mus musculus strain 129/SvJ BAC clone citb585c7 from the MHC region, complete sequence Length = 192871 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gagaaggcaaggaggaaggggaag 85 ||||||| |||||||||||||||| Sbjct: 48387 gagaagggaaggaggaaggggaag 48410
>gb|AC133633.5| Homo sapiens chromosome 8, clone CTD-2517C5, complete sequence Length = 94195 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 actcaacaatgacaagctga 431 |||||||||||||||||||| Sbjct: 84610 actcaacaatgacaagctga 84591
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacggg 103 |||| ||||||||||||||||||| Sbjct: 123319 gggatgatgccggcggggcacggg 123342
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacggg 103 |||| ||||||||||||||||||| Sbjct: 14376 gggatgatgccggcggggcacggg 14399
>dbj|AK072516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131A13, full insert sequence Length = 1158 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gggaagatgccggcggggcacggg 103 |||| ||||||||||||||||||| Sbjct: 258 gggatgatgccggcggggcacggg 281
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cgtctggaacgtcaccaagc 293 |||||||||||||||||||| Sbjct: 1213948 cgtctggaacgtcaccaagc 1213929
>gb|AE003575.5| Drosophila melanogaster chromosome 2L, section 16 of 83 of the complete sequence Length = 330399 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gcaaggaggaaggggaagatgccggcgg 95 |||||||||| |||||||||||||||| Sbjct: 76883 gcaaggaggagagggaagatgccggcgg 76910
>gb|AC007436.1| Homo sapiens 12 BAC RP11-436I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163881 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 aggcaaggaggaaggggaagatgc 89 ||||| |||||||||||||||||| Sbjct: 56838 aggcatggaggaaggggaagatgc 56861
>gb|AC005807.1|AC005807 Mus musculus chromosome 17 BAC clone citb585c7 from MHC region, complete sequence Length = 65870 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 gagaaggcaaggaggaaggggaag 85 ||||||| |||||||||||||||| Sbjct: 17621 gagaagggaaggaggaaggggaag 17598
>emb|CT030728.6| Mouse DNA sequence from clone RP23-108F2 on chromosome 17, complete sequence Length = 219013 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 gagaaggcaaggaggaaggggaag 85 ||||||| |||||||||||||||| Sbjct: 40836 gagaagggaaggaggaaggggaag 40813
>dbj|AP003072.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-573M3, complete sequence Length = 106000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 agagaaggcaaggaggaagg 80 |||||||||||||||||||| Sbjct: 67010 agagaaggcaaggaggaagg 67029 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,522,884 Number of Sequences: 3902068 Number of extensions: 4522884 Number of successful extensions: 95161 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94306 Number of HSP's gapped (non-prelim): 838 length of query: 666 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 643 effective length of database: 17,143,297,704 effective search space: 11023140423672 effective search space used: 11023140423672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)