ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39j10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009342.1| Triticum aestivum clone wlm4.pk0018.d5:fis, full insert mRNA sequence Length = 1719 Score = 825 bits (416), Expect = 0.0 Identities = 496/522 (95%), Gaps = 3/522 (0%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| Sbjct: 997 gaaaagatcgagcagttctgcgccacaggtccaaatgacaatgtatcctgggaaatgcat 1056 Query: 61 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 1116 Query: 121 gtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 180 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 gtttcaattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 1176 Query: 181 tggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaattgcactgattat 240 |||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||| Sbjct: 1177 tggttccctgcatcaaaaaccttccgagaattagtgtcctgttcaaattgcacagattat 1236 Query: 241 caggcaaggagacttggaataggctatggccagaaaaagaatgatgagcaatccaagcag 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1237 caggcaaggagacttggaataggctatggccagaaaaagaatgatgagcaatcgaagcag 1296 Query: 301 tttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgtattctg 360 || ||||||||| |||| || ||||||||||||||||||||||| || |||||||||||| Sbjct: 1297 ttcgttcatatgttgaattccacgctgactgcaactgagaggacactttgctgtattctg 1356 Query: 361 gagaactaccagcgggagggtggtgttgaggtgccagtggtgttgcggccattcatgctt 420 ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1357 gagaactaccagcgggaaggtggtgttgaagtgccagaggtgttgcggccattcatgctt 1416 Query: 421 ggaatagatttccttcctttcaagcggcctc---ttgatagcaaacaagctgctgctgac 477 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1417 ggaatagatttccttcctttcaagcggcctcttgttgatagcaaacaagctgctgctgac 1476 Query: 478 tccaagcccaacaagtctaaaccaaagggaaatgcggcttga 519 ||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 1477 tccaaacccaataagtctaaaccaaagggaaatgcagcttga 1518 Score = 161 bits (81), Expect = 4e-36 Identities = 120/129 (93%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 533 tgaactgaaaattgtttccaggcagataatgatgcatccttcctttttattaatttc-tg 591 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | Sbjct: 1516 tgaactgaaaattgtttccaggcagataatgatgcacccttcc-ttttattaatttcaag 1574 Query: 592 agtcgtctgtagcatgatgatgatttggtgtcccattttggat-gttttggttacaaagt 650 | | ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1575 aatggtctgtagcatgatgatgatttggtctcccattttggatggttttggttacgaagt 1634 Query: 651 attgcaatc 659 ||||||||| Sbjct: 1635 attgcaatc 1643
>dbj|AK103101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N18, full insert sequence Length = 1846 Score = 398 bits (201), Expect = e-108 Identities = 384/445 (86%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 ||||||||||| || ||||||| ||||| |||||||||||| | ||| ||||| |||||| Sbjct: 941 gaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttgggagatgcat 1000 Query: 61 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 120 || || |||||||||||| |||||||||| || ||| |||||| ||||| |||||||| Sbjct: 1001 gaagaaatgattaaaaattcagaagatttctacaaggagattggcctaccgtatcaactt 1060 Query: 121 gtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 180 || || || || ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1061 gtctccatcgtgtctggtgctcttaatgatgctgcagctaagaagtatgatttagaagca 1120 Query: 181 tggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaattgcactgattat 240 |||||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| | Sbjct: 1121 tggttccctgcatcaaaaacctacagggaattagtgtcctgctcaaattgcacagatttt 1180 Query: 241 caggcaaggagacttggaataggctatggccagaaaaagaatgatgagcaatccaagcag 300 || |||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 1181 caagcaaggagacttggtataggttatggccagaaaaagaatgacgaacaatccaagcaa 1240 Query: 301 tttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgtattctg 360 |||||||||||| ||||||| || ||||||| |||||||||||||| ||||||||| || Sbjct: 1241 tttgttcatatgttgaactcaacattgactgccactgagaggaccctttgctgtattttg 1300 Query: 361 gagaactaccagcgggagggtggtgttgaggtgccagtggtgttgcggccattcatgctt 420 ||||||| |||| ||||| ||||||||| || ||| | |||| || | |||| | Sbjct: 1301 gagaacttccagagggagaatggtgttgaagttccaaaagcattgcaaccttacatgggt 1360 Query: 421 ggaatagatttccttcctttcaagc 445 ||||| ||||||||||||||||||| Sbjct: 1361 ggaatcgatttccttcctttcaagc 1385
>dbj|AK059522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C08, full insert sequence Length = 1842 Score = 398 bits (201), Expect = e-108 Identities = 384/445 (86%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 ||||||||||| || ||||||| ||||| |||||||||||| | ||| ||||| |||||| Sbjct: 937 gaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttgggagatgcat 996 Query: 61 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 120 || || |||||||||||| |||||||||| || ||| |||||| ||||| |||||||| Sbjct: 997 gaagaaatgattaaaaattcagaagatttctacaaggagattggcctaccgtatcaactt 1056 Query: 121 gtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 180 || || || || ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1057 gtctccatcgtgtctggtgctcttaatgatgctgcagctaagaagtatgatttagaagca 1116 Query: 181 tggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaattgcactgattat 240 |||||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| | Sbjct: 1117 tggttccctgcatcaaaaacctacagggaattagtgtcctgctcaaattgcacagatttt 1176 Query: 241 caggcaaggagacttggaataggctatggccagaaaaagaatgatgagcaatccaagcag 300 || |||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 1177 caagcaaggagacttggtataggttatggccagaaaaagaatgacgaacaatccaagcaa 1236 Query: 301 tttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgtattctg 360 |||||||||||| ||||||| || ||||||| |||||||||||||| ||||||||| || Sbjct: 1237 tttgttcatatgttgaactcaacattgactgccactgagaggaccctttgctgtattttg 1296 Query: 361 gagaactaccagcgggagggtggtgttgaggtgccagtggtgttgcggccattcatgctt 420 ||||||| |||| ||||| ||||||||| || ||| | |||| || | |||| | Sbjct: 1297 gagaacttccagagggagaatggtgttgaagttccaaaagcattgcaaccttacatgggt 1356 Query: 421 ggaatagatttccttcctttcaagc 445 ||||| ||||||||||||||||||| Sbjct: 1357 ggaatcgatttccttcctttcaagc 1381
>ref|NM_193493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 383 bits (193), Expect = e-103 Identities = 382/445 (85%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||| ||||| ||||||| |||| |||||||||||| | ||||||||| |||||| Sbjct: 853 gaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctgggagatgcat 912 Query: 61 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 120 || || ||||| |||||| |||||||||| || ||| |||||| ||||| || ||||| Sbjct: 913 gaagaaatgataaaaaattcagaagatttctacaaggagattggcctaccgtaccaactt 972 Query: 121 gtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 180 || || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 973 gtctccattgtgtctggtgctcttaatgatgctgcagctaagaagtatgatttagaagca 1032 Query: 181 tggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaattgcactgattat 240 |||||||||||||||||||||| || ||| |||| ||||| ||||||||||| |||| | Sbjct: 1033 tggttccctgcatcaaaaacctatagggaattagtgtcctgctcaaattgcacagatttt 1092 Query: 241 caggcaaggagacttggaataggctatggccagaaaaagaatgatgagcaatccaagcag 300 || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1093 caagcaaggagacttggtataggttatggccagaaaaagaatgatgagcaatccaagcaa 1152 Query: 301 tttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgtattctg 360 || ||||||||| ||||||| || ||||||| |||||||||||||| ||||||||| || Sbjct: 1153 ttcgttcatatgttgaactcaacattgactgccactgagaggaccctttgctgtattttg 1212 Query: 361 gagaactaccagcgggagggtggtgttgaggtgccagtggtgttgcggccattcatgctt 420 ||||||| |||| |||| |||||| || || ||| | |||| ||| | |||| | Sbjct: 1213 gagaacttccagaaggagaatggtgtcgaagttccaaaagcattgcagccttacatgggt 1272 Query: 421 ggaatagatttccttcctttcaagc 445 ||||| ||||||||||||||||||| Sbjct: 1273 ggaatcgatttccttcctttcaagc 1297
>dbj|AK105730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H03, full insert sequence Length = 1771 Score = 383 bits (193), Expect = e-103 Identities = 382/445 (85%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||| ||||| ||||||| |||| |||||||||||| | ||||||||| |||||| Sbjct: 980 gaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctgggagatgcat 1039 Query: 61 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 120 || || ||||| |||||| |||||||||| || ||| |||||| ||||| || ||||| Sbjct: 1040 gaagaaatgataaaaaattcagaagatttctacaaggagattggcctaccgtaccaactt 1099 Query: 121 gtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 180 || || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1100 gtctccattgtgtctggtgctcttaatgatgctgcagctaagaagtatgatttagaagca 1159 Query: 181 tggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaattgcactgattat 240 |||||||||||||||||||||| || ||| |||| ||||| ||||||||||| |||| | Sbjct: 1160 tggttccctgcatcaaaaacctatagggaattagtgtcctgctcaaattgcacagatttt 1219 Query: 241 caggcaaggagacttggaataggctatggccagaaaaagaatgatgagcaatccaagcag 300 || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1220 caagcaaggagacttggtataggttatggccagaaaaagaatgatgagcaatccaagcaa 1279 Query: 301 tttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgtattctg 360 || ||||||||| ||||||| || ||||||| |||||||||||||| ||||||||| || Sbjct: 1280 ttcgttcatatgttgaactcaacattgactgccactgagaggaccctttgctgtattttg 1339 Query: 361 gagaactaccagcgggagggtggtgttgaggtgccagtggtgttgcggccattcatgctt 420 ||||||| |||| |||| |||||| || || ||| | |||| ||| | |||| | Sbjct: 1340 gagaacttccagaaggagaatggtgtcgaagttccaaaagcattgcagccttacatgggt 1399 Query: 421 ggaatagatttccttcctttcaagc 445 ||||| ||||||||||||||||||| Sbjct: 1400 ggaatcgatttccttcctttcaagc 1424
>gb|BT017097.1| Zea mays clone EL01N0361G05.c mRNA sequence Length = 1308 Score = 371 bits (187), Expect = 2e-99 Identities = 298/335 (88%) Strand = Plus / Plus Query: 31 ccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagatttt 90 ||||||||||| | || ||||| |||||||| |||||| | ||||| ||||||||| Sbjct: 626 ccaaatgacaatgattcttgggagatgcatgaagagatgctaaaaaactcagaagattac 685 Query: 91 tatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgat 150 ||| ||| ||||||||||||||| ||| | || || |||||||||||||||||||||||| Sbjct: 686 tataaggagattgggctaccataccaagttgtttccattgtctctggtgctcttaatgat 745 Query: 151 gctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaa 210 ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 746 gctgctgctaagaaatatgatttggaagcatggttccctgcatcaaagaccttccgagag 805 Query: 211 ctagtatcctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggc 270 |||||||||||||||| |||||||| | |||| |||||||||||||||| || |||||| Sbjct: 806 ttagtatcctgttcaaactgcactgactttcagtcaaggagacttggaattgggtatggc 865 Query: 271 cagaaaaagaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgact 330 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 866 cagaaaaagaatgatgagcagtccaagcagtttgttcatatgctgaactctaccttgact 925 Query: 331 gcaactgagaggaccctatgctgtattctggagaa 365 || |||||||||||||| || |||||||||||||| Sbjct: 926 gccactgagaggaccctctgttgtattctggagaa 960 Score = 60.0 bits (30), Expect = 1e-05 Identities = 86/104 (82%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 420 tggaatagatttccttcctttcaagcggcctcttgatagcaaacaagctgctgctgactc 479 ||||||||| || ||||||||||||| ||| | ||| |||||||||| ||| |||| Sbjct: 1015 tggaatagagtttcttcctttcaagcaacctttggatgtcaaacaagcttctg---actc 1071 Query: 480 caagcccaacaagtctaaaccaaagggaaatgcggcttgagctg 523 ||| | |||||||| ||| ||||||||||||| |||||||||| Sbjct: 1072 caaatcaaacaagtccaaatcaaagggaaatgctgcttgagctg 1115
>gb|AY103609.1| Zea mays PCO093348 mRNA sequence Length = 1932 Score = 367 bits (185), Expect = 3e-98 Identities = 403/475 (84%), Gaps = 3/475 (0%) Strand = Plus / Plus Query: 46 tcctgggaaatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattggg 105 |||||||| || ||||| |||||| | |||||| |||||||||| || ||| ||||||| Sbjct: 978 tcctgggagatccatgaagagatgctaaaaaattcagaagatttctacaaggagattggg 1037 Query: 106 ctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagctaagaag 165 |||||||| ||| | || || |||||||| ||||||||||| |||||||| |||||||| Sbjct: 1038 ctaccataccaagttgtttccattgtctccggtgctcttaacgatgctgctgctaagaaa 1097 Query: 166 tatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatcctgttca 225 || ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| Sbjct: 1098 tacgatttggaagcatggttccctgcatcaaagaccttccgagagttagtatcctgttca 1157 Query: 226 aattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaagaatgat 285 ||||||||||| | |||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 1158 aattgcactgactttcagtcaaggagacttggaattgggtatggccagaaaaagaatgac 1217 Query: 286 gagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactgagaggacc 345 ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1218 gagcagtccaagcagtttgttcatatgctgaactctaccttgactgccactgagaggacc 1277 Query: 346 ctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccagtggtgttg 405 || || || || |||||||| | |||| ||||| || || ||||||||| || | || Sbjct: 1278 ctctgttgcatcctggagaatttccagaaggaggacggcgtcgaggtgccaaaggcgctg 1337 Query: 406 cggccattcatgcttggaatagatttccttcctttcaagcggcctcttgatagcaaacaa 465 | ||| | ||| ||||||||| |||||||||||||||| ||| | ||| ||||||| Sbjct: 1338 cagccttatatgggtggaatagagttccttcctttcaagcaacctttggatgccaaacaa 1397 Query: 466 gctgctgctgactccaagcccaacaagtctaaaccaaagggaaatgcggcttgag 520 |||||||||||||| | |||||||| ||| ||||||||||||| ||||||| Sbjct: 1398 ---gctgctgactccaaatcaaacaagtccaaatcaaagggaaatgctgcttgag 1449
>emb|AJ007665.1|ZMA7665 Zea mays mRNA for cytosolic seryl-tRNA synthetase Length = 1907 Score = 319 bits (161), Expect = 7e-84 Identities = 283/321 (88%), Gaps = 2/321 (0%) Strand = Plus / Plus Query: 46 tcctgggaaatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattggg 105 |||||||| || ||||| |||||| | |||||| |||||||||| || ||| ||||||| Sbjct: 952 tcctgggagatccatgaagagatgctaaaaaattcagaagatttctacaaggagattggg 1011 Query: 106 ctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagctaagaag 165 |||||||| ||| | || || |||||||| || |||||||| |||||||| |||||||| Sbjct: 1012 ctaccataccaagttgtttccattgtctccggcgctcttaacgatgctgctgctaagaaa 1071 Query: 166 tatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatcctgttca 225 || ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| Sbjct: 1072 tacgatttggaagcatggttccctgcatcaaagaccttccgagagttagtatcctgttca 1131 Query: 226 aattgcactgattatcaggcaa-ggagacttggaataggctatggccagaaaaagaatga 284 || |||||||| | |||| ||| ||||||||||||| || |||||||||||||||||||| Sbjct: 1132 aactgcactgact-tcagtcaaaggagacttggaattgggtatggccagaaaaagaatga 1190 Query: 285 tgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactgagaggac 344 |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1191 tgagcagtccaagcagtttgttcatatgctgaactctaccttgactgccactgagaggac 1250 Query: 345 cctatgctgtattctggagaa 365 ||| || |||||||||||||| Sbjct: 1251 cctctgttgtattctggagaa 1271 Score = 54.0 bits (27), Expect = 6e-04 Identities = 83/101 (82%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 420 tggaatagatttccttcctttcaagcggcctcttgatagcaaacaagctgctgctgactc 479 ||||||||| || ||||||||||||| ||| | ||| |||||||||| ||| |||| Sbjct: 1326 tggaatagagtttcttcctttcaagcaacctttggatgtcaaacaagcttctg---actc 1382 Query: 480 caagcccaacaagtctaaaccaaagggaaatgcggcttgag 520 ||| | |||||||| ||| ||||||||||||| ||||||| Sbjct: 1383 caaatcaaacaagtccaaatcaaagggaaatgctgcttgag 1423
>dbj|AK069764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G18, full insert sequence Length = 1799 Score = 276 bits (139), Expect = 9e-71 Identities = 244/279 (87%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||| ||||| ||||||| |||| |||||||||||| | ||||||||| |||||| Sbjct: 932 gaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctgggagatgcat 991 Query: 61 gaggagatgattaaaaatgcagaagatttttatcaggcgattgggctaccatatcaacta 120 || || ||||| |||||| |||||||||| || ||| |||||| ||||| || ||||| Sbjct: 992 gaagaaatgataaaaaattcagaagatttctacaaggagattggcctaccgtaccaactt 1051 Query: 121 gtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagca 180 || || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1052 gtctccattgtgtctggtgctcttaatgatgctgcagctaagaagtatgatttagaagca 1111 Query: 181 tggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaattgcactgattat 240 |||||||||||||||||||||| || ||| |||| ||||| ||||||||||| |||| | Sbjct: 1112 tggttccctgcatcaaaaacctatagggaattagtgtcctgctcaaattgcacagatttt 1171 Query: 241 caggcaaggagacttggaataggctatggccagaaaaag 279 || |||||||||||||| ||||| ||||||||||||||| Sbjct: 1172 caagcaaggagacttggtataggttatggccagaaaaag 1210 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 |||||||||||||||||||||| || ||||||||| ||||||| || ||||||| |||| Sbjct: 1292 agaatgatgagcaatccaagcaattcgttcatatgttgaactcaacattgactgccactg 1351 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| |||| |||||| || || ||| Sbjct: 1352 agaggaccctttgctgtattttggagaacttccagaaggagaatggtgtcgaagttccaa 1411 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| ||| | |||| |||||| ||||||||||||||||||| Sbjct: 1412 aagcattgcagccttacatgggtggaatcgatttccttcctttcaagc 1459
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 216 bits (109), Expect = 7e-53 Identities = 163/181 (90%) Strand = Plus / Plus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 5138086 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 5138145 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 5138146 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 5138205 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 5138206 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 5138265 Query: 279 g 279 | Sbjct: 5138266 g 5138266 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 ||||||| || ||||||||||| |||||||||||| ||||||| || ||||||| |||| Sbjct: 5138348 agaatgacgaacaatccaagcaatttgttcatatgttgaactcaacattgactgccactg 5138407 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| ||||| ||||||||| || ||| Sbjct: 5138408 agaggaccctttgctgtattttggagaacttccagagggagaatggtgttgaagttccaa 5138467 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| || | |||| |||||| ||||||||||||||||||| Sbjct: 5138468 aagcattgcaaccttacatgggtggaatcgatttccttcctttcaagc 5138515 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 ||||||||||| || ||||||| ||||| |||||||||||| | ||| ||||| |||||| Sbjct: 5137895 gaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttgggagatgcat 5137954 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || |||||||||||| |||||||||| Sbjct: 5137955 gaagaaatgattaaaaattcagaagattt 5137983
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 216 bits (109), Expect = 7e-53 Identities = 163/181 (90%) Strand = Plus / Minus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 31619 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 31560 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 31559 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 31500 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 31499 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 31440 Query: 279 g 279 | Sbjct: 31439 g 31439 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Minus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 ||||||| || ||||||||||| |||||||||||| ||||||| || ||||||| |||| Sbjct: 31357 agaatgacgaacaatccaagcaatttgttcatatgttgaactcaacattgactgccactg 31298 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| ||||| ||||||||| || ||| Sbjct: 31297 agaggaccctttgctgtattttggagaacttccagagggagaatggtgttgaagttccaa 31238 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| || | |||| |||||| ||||||||||||||||||| Sbjct: 31237 aagcattgcaaccttacatgggtggaatcgatttccttcctttcaagc 31190 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 ||||||||||| || ||||||| ||||| |||||||||||| | ||| ||||| |||||| Sbjct: 31810 gaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttgggagatgcat 31751 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || |||||||||||| |||||||||| Sbjct: 31750 gaagaaatgattaaaaattcagaagattt 31722
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 216 bits (109), Expect = 7e-53 Identities = 163/181 (90%) Strand = Plus / Minus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 118432 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 118373 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 118372 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 118313 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 118312 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 118253 Query: 279 g 279 | Sbjct: 118252 g 118252 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Minus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 ||||||| || ||||||||||| |||||||||||| ||||||| || ||||||| |||| Sbjct: 118170 agaatgacgaacaatccaagcaatttgttcatatgttgaactcaacattgactgccactg 118111 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| ||||| ||||||||| || ||| Sbjct: 118110 agaggaccctttgctgtattttggagaacttccagagggagaatggtgttgaagttccaa 118051 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| || | |||| |||||| ||||||||||||||||||| Sbjct: 118050 aagcattgcaaccttacatgggtggaatcgatttccttcctttcaagc 118003 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 ||||||||||| || ||||||| ||||| |||||||||||| | ||| ||||| |||||| Sbjct: 118623 gaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttgggagatgcat 118564 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || |||||||||||| |||||||||| Sbjct: 118563 gaagaaatgattaaaaattcagaagattt 118535
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 216 bits (109), Expect = 7e-53 Identities = 163/181 (90%) Strand = Plus / Plus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 5137303 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 5137362 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 5137363 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 5137422 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 5137423 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 5137482 Query: 279 g 279 | Sbjct: 5137483 g 5137483 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 ||||||| || ||||||||||| |||||||||||| ||||||| || ||||||| |||| Sbjct: 5137565 agaatgacgaacaatccaagcaatttgttcatatgttgaactcaacattgactgccactg 5137624 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| ||||| ||||||||| || ||| Sbjct: 5137625 agaggaccctttgctgtattttggagaacttccagagggagaatggtgttgaagttccaa 5137684 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| || | |||| |||||| ||||||||||||||||||| Sbjct: 5137685 aagcattgcaaccttacatgggtggaatcgatttccttcctttcaagc 5137732 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 ||||||||||| || ||||||| ||||| |||||||||||| | ||| ||||| |||||| Sbjct: 5137112 gaaaagatcgaacaattctgtgtcacaagtccaaatgacaatgaatcttgggagatgcat 5137171 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || |||||||||||| |||||||||| Sbjct: 5137172 gaagaaatgattaaaaattcagaagattt 5137200
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 208 bits (105), Expect = 2e-50 Identities = 162/181 (89%) Strand = Plus / Plus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| || ||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 21175144 gattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagc 21175203 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||| || Sbjct: 21175204 taagaagtatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtc 21175263 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 21175264 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 21175323 Query: 279 g 279 | Sbjct: 21175324 g 21175324 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 |||||||||||||||||||||| || ||||||||| ||||||| || ||||||| |||| Sbjct: 21175406 agaatgatgagcaatccaagcaattcgttcatatgttgaactcaacattgactgccactg 21175465 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| |||| |||||| || || ||| Sbjct: 21175466 agaggaccctttgctgtattttggagaacttccagaaggagaatggtgtcgaagttccaa 21175525 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| ||| | |||| |||||| ||||||||||||||||||| Sbjct: 21175526 aagcattgcagccttacatgggtggaatcgatttccttcctttcaagc 21175573 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||| ||||| ||||||| |||| |||||||||||| | ||||||||| |||||| Sbjct: 21174953 gaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctgggagatgcat 21175012 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || ||||| |||||| |||||||||| Sbjct: 21175013 gaagaaatgataaaaaattcagaagattt 21175041
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 208 bits (105), Expect = 2e-50 Identities = 162/181 (89%) Strand = Plus / Plus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| || ||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 142689 gattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagc 142748 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||| || Sbjct: 142749 taagaagtatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtc 142808 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 142809 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 142868 Query: 279 g 279 | Sbjct: 142869 g 142869 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 |||||||||||||||||||||| || ||||||||| ||||||| || ||||||| |||| Sbjct: 142951 agaatgatgagcaatccaagcaattcgttcatatgttgaactcaacattgactgccactg 143010 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| |||| |||||| || || ||| Sbjct: 143011 agaggaccctttgctgtattttggagaacttccagaaggagaatggtgtcgaagttccaa 143070 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| ||| | |||| |||||| ||||||||||||||||||| Sbjct: 143071 aagcattgcagccttacatgggtggaatcgatttccttcctttcaagc 143118 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||| ||||| ||||||| |||| |||||||||||| | ||||||||| |||||| Sbjct: 142498 gaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctgggagatgcat 142557 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || ||||| |||||| |||||||||| Sbjct: 142558 gaagaaatgataaaaaattcagaagattt 142586
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 208 bits (105), Expect = 2e-50 Identities = 162/181 (89%) Strand = Plus / Plus Query: 99 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 158 |||||| ||||| || ||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 72653 gattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagc 72712 Query: 159 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 218 ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||| || Sbjct: 72713 taagaagtatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtc 72772 Query: 219 ctgttcaaattgcactgattatcaggcaaggagacttggaataggctatggccagaaaaa 278 ||| ||||||||||| |||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 72773 ctgctcaaattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaa 72832 Query: 279 g 279 | Sbjct: 72833 g 72833 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 278 agaatgatgagcaatccaagcagtttgttcatatgctgaactctacgctgactgcaactg 337 |||||||||||||||||||||| || ||||||||| ||||||| || ||||||| |||| Sbjct: 72915 agaatgatgagcaatccaagcaattcgttcatatgttgaactcaacattgactgccactg 72974 Query: 338 agaggaccctatgctgtattctggagaactaccagcgggagggtggtgttgaggtgccag 397 |||||||||| ||||||||| ||||||||| |||| |||| |||||| || || ||| Sbjct: 72975 agaggaccctttgctgtattttggagaacttccagaaggagaatggtgtcgaagttccaa 73034 Query: 398 tggtgttgcggccattcatgcttggaatagatttccttcctttcaagc 445 | |||| ||| | |||| |||||| ||||||||||||||||||| Sbjct: 73035 aagcattgcagccttacatgggtggaatcgatttccttcctttcaagc 73082 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1 gaaaagatcgagcagttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcat 60 |||||||| ||||| ||||||| |||| |||||||||||| | ||||||||| |||||| Sbjct: 72462 gaaaagattgagcaattctgtgttacaagtccaaatgacaatgaatcctgggagatgcat 72521 Query: 61 gaggagatgattaaaaatgcagaagattt 89 || || ||||| |||||| |||||||||| Sbjct: 72522 gaagaaatgataaaaaattcagaagattt 72550
>emb|Z98761.1|HASERTS Helianthus annuus mRNA for seryl-tRNA synthetase Length = 1620 Score = 117 bits (59), Expect = 5e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 49 tgggaaatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggcta 108 |||||||||||||| ||||||||||||||| | || || ||||||||| | | | Sbjct: 1013 tgggaaatgcatgaagagatgattaaaaattctgaggagttttatcagatgttgaaattg 1072 Query: 109 ccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtat 168 || |||||| ||||||| || || |||||||| || || ||||||||||| ||||||||| Sbjct: 1073 ccgtatcaagtagtgtctatagtttctggtgcgctaaacgatgctgcagcaaagaagtat 1132 Query: 169 gatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaat 228 || |||||||||||||| |||||||| ||||| | ||||||||| || || ||||| ||| Sbjct: 1133 gacttggaagcatggtttcctgcatccaaaacttacagagaacttgtttcatgttctaat 1192 Query: 229 tgcactgatta 239 ||||| ||||| Sbjct: 1193 tgcacagatta 1203 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 316 aactctacgctgactgcaactgagaggaccctatgctgtattctggagaactacca 371 |||||||||||||| ||||| |||||||| || ||||| ||||| || |||||||| Sbjct: 1280 aactctacgctgacagcaacagagaggactctttgctgcattctcgaaaactacca 1335
>ref|NM_122629.2| Arabidopsis thaliana ATP binding / serine-tRNA ligase/ tRNA ligase AT5G27470 mRNA, complete cds Length = 1670 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 1238 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 1297 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 1298 attctcgagaactaccagcgagaggatggtgt 1329
>emb|Z70313.1|ATSTRNSN A.thaliana mRNA for seryl-tRNA synthetase Length = 1615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 1211 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 1270 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 1271 attctcgagaactaccagcgagaggatggtgt 1302
>gb|AY051054.1| Arabidopsis thaliana putative seryl-tRNA synthetase (AT5g27470) mRNA, complete cds Length = 1387 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 1159 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 1218 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 1219 attctcgagaactaccagcgagaggatggtgt 1250
>gb|AF360352.1| Arabidopsis thaliana putative seryl-tRNA synthetase (At5g27470) mRNA, complete cds Length = 1566 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 1210 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 1269 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 1270 attctcgagaactaccagcgagaggatggtgt 1301
>emb|BX831358.1|CNS0A1RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS81ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1510 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 1224 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 1283 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 1284 attctcgagaactaccagcgagaggatggtgt 1315
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 6244 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 6303 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 6304 attctcgagaactaccagcgagaggatggtgt 6335
>gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from chromosome V near 61 cM, complete sequence Length = 133195 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 295 aagcagtttgttcatatgctgaactctacgctgactgcaactgagaggaccctatgctgt 354 ||||||| ||| ||||||||||| || || || |||||||| ||||||||| | ||||| Sbjct: 98596 aagcagtatgtgcatatgctgaattcgacacttactgcaacagagaggaccatttgctgc 98655 Query: 355 attctggagaactaccagcgggagggtggtgt 386 ||||| |||||||||||||| |||| |||||| Sbjct: 98656 attctcgagaactaccagcgagaggatggtgt 98687
>emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4 Length = 44082 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 127 attgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagcatggttc 186 ||||| ||||||||| | || ||||||| || |||||||||||||||||||| |||||| Sbjct: 14931 attgtttctggtgctttgaacaatgctgctgccaagaagtatgatttggaagcttggttc 14872 Query: 187 cct 189 ||| Sbjct: 14871 cct 14869
>ref|NM_001020296.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC29A4.15), partial mRNA Length = 1353 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 127 attgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagcatggttc 186 ||||| ||||||||| | || ||||||| || |||||||||||||||||||| |||||| Sbjct: 991 attgtttctggtgctttgaacaatgctgctgccaagaagtatgatttggaagcttggttc 1050 Query: 187 cct 189 ||| Sbjct: 1051 cct 1053
>ref|XM_715006.1| Candida albicans SC5314 putative serine tRNA synthetase (CaO19_7901), mRNA Length = 1389 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 149 atgctgcagctaagaagtatgatttggaagcatggttccc 188 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1037 atgctgctgctaagaaatacgatttggaagcttggttccc 1076
>ref|XM_714874.1| Candida albicans SC5314 putative serine tRNA synthetase (CaO19_269), mRNA Length = 1377 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 149 atgctgcagctaagaagtatgatttggaagcatggttccc 188 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1025 atgctgctgctaagaaatacgatttggaagcttggttccc 1064
>gb|AF290915.1|AF290915 Candida albicans seryl-tRNA synthetase (SES1) gene, complete cds Length = 3098 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 149 atgctgcagctaagaagtatgatttggaagcatggttccc 188 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1489 atgctgctgctaagaaatacgatttggaagcttggttccc 1528
>ref|NM_208212.1| Eremothecium gossypii ABL088Cp (ABL088C), mRNA Length = 1380 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 149 atgctgcagctaagaagtatgatttggaagcatggttccc 188 ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 1037 atgctgctgctaaaaagtacgatttggaagcttggttccc 1076
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 149 atgctgcagctaagaagtatgatttggaagcatggttccc 188 ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 234399 atgctgctgctaaaaagtacgatttggaagcttggttccc 234360
>ref|XM_661530.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80542) partial mRNA Length = 1365 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 142 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccc 188 ||||| || |||||| | |||||||||||||| ||||| |||||||| Sbjct: 1036 cttaacgacgctgcatcgaagaagtatgatttagaagcttggttccc 1082
>ref|XM_627356.1| Cryptosporidium parvum Iowa II seryl-tRNA synthetase, cytoplasmic (cgd8_4720), partial mRNA Length = 1365 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 142 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccc 188 |||||||| |||||| | || ||||||||||| ||||| |||||||| Sbjct: 1036 cttaatgacgctgcatcgaaaaagtatgatttagaagcttggttccc 1082
>ref|XM_823696.1| Trypanosoma brucei TREU927 seryl-tRNA synthetase (Tb11.02.5020) partial mRNA Length = 1440 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 154 gcagctaagaagtatgatttggaagcatggttccctgc 191 ||||| |||||||| |||||||| || ||||||||||| Sbjct: 1096 gcagcaaagaagtacgatttggaggcttggttccctgc 1133
>ref|XM_384378.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04202.1) partial mRNA Length = 1416 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 151 gctgcagctaagaagtatgatttggaagcatggttccc 188 ||||| || |||||||| ||||||||||| |||||||| Sbjct: 1021 gctgctgccaagaagtacgatttggaagcgtggttccc 1058
>ref|XM_645587.1| Entamoeba histolytica HM-1:IMSS seryl-tRNA synthetase (204.t00006) partial mRNA Length = 1362 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tgggaaatgcatgaggagatgattaaaaat 78 |||||||||||||| || |||||||||||| Sbjct: 916 tgggaaatgcatgaagaaatgattaaaaat 945
>emb|AL132772.14|HS1013A22 Human DNA sequence from clone RP5-1013A22 on chromosome 20 Contains the HNF4A gene for hepatocyte nuclear factor 4, a novel gene, the C20orf62 gene for chromosome 20 open reading frame 62, the RPL37AP1 gene for ribosomal protein L37a pseudogene 1 and the 5' end of the C20orf121 gene for chromosome 20 open reading frame 121, complete sequence Length = 83798 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 454 gatagcaaacaagctgctgctg 475 |||||||||||||||||||||| Sbjct: 3666 gatagcaaacaagctgctgctg 3687
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 618 ggtgtcccattttggatgtttt 639 |||||||||||||||||||||| Sbjct: 1953762 ggtgtcccattttggatgtttt 1953783
>emb|AL671986.7| Human DNA sequence from clone RP11-275F13 on chromosome 1 Contains the 5' end of the C1orf34 gene for chromosome 1 open reading frame 34, a novel gene, the 3' end of the EPS15 gene for epidermal growth factor receptor pathway substrate 15 and a proteasome (prosome macropain) 26S subunit non-ATPase 7 (Mov34 homolog) (PSMD7) pseudogene, complete sequence Length = 113813 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 tatggccagaaaaagaatgatgagc 289 ||||||||||||||||||| ||||| Sbjct: 111193 tatggccagaaaaagaatgctgagc 111217
>ref|XM_504912.1| Yarrowia lipolytica CLIB122, YALI0F02629g predicted mRNA Length = 1362 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 ccctatgctgtattctggagaactaccag 372 |||| ||||| |||||||||||||||||| Sbjct: 1208 ccctgtgctgcattctggagaactaccag 1236
>emb|AL139350.17| Human DNA sequence from clone RP11-307O10 on chromosome 20 Contains part of a novel gene, an EST, an STS and GSSs, complete sequence Length = 181585 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 catccttcctttttattaatt 587 ||||||||||||||||||||| Sbjct: 18597 catccttcctttttattaatt 18577
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 atggccagaaaaagaatgatg 286 ||||||||||||||||||||| Sbjct: 3036378 atggccagaaaaagaatgatg 3036398
>emb|AL133642.1|HSM801511 Homo sapiens mRNA; cDNA DKFZp586G1721 (from clone DKFZp586G1721) Length = 2917 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ggccattcatgcttggaatag 427 ||||||||||||||||||||| Sbjct: 2069 ggccattcatgcttggaatag 2089
>emb|CR625594.1| full-length cDNA clone CS0DF026YM07 of Fetal brain of Homo sapiens (human) Length = 2282 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ggccattcatgcttggaatag 427 ||||||||||||||||||||| Sbjct: 1508 ggccattcatgcttggaatag 1528
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence Length = 196512 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 ttctgtgccacaaatccaaatgaca 40 |||||||||||||||||||| |||| Sbjct: 72342 ttctgtgccacaaatccaaaagaca 72318
>emb|AL133523.5|CNS01DVB Human chromosome 14 DNA sequence BAC R-775G15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173039 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ggccattcatgcttggaatag 427 ||||||||||||||||||||| Sbjct: 76794 ggccattcatgcttggaatag 76814
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 344 ccctatgctgtattctggagaactaccag 372 |||| ||||| |||||||||||||||||| Sbjct: 389653 ccctgtgctgcattctggagaactaccag 389625
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 cctatgctgtattctggagaa 365 ||||||||||||||||||||| Sbjct: 884073 cctatgctgtattctggagaa 884053
>ref|NM_001030789.1| Gallus gallus RCSD domain containing 1 (RCSD1), mRNA Length = 3365 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gttgaggtgccagtggtgtt 404 |||||||||||||||||||| Sbjct: 1187 gttgaggtgccagtggtgtt 1168
>ref|XM_526294.1| PREDICTED: Pan troglodytes similar to Krueppel-like factor 15 (Kidney-enriched kruppel-like factor) (LOC470911), mRNA Length = 3030 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 ggcttgagctgcaagaggag 532 |||||||||||||||||||| Sbjct: 416 ggcttgagctgcaagaggag 435
>gb|AE017141.1| Yersinia pestis biovar Medievalis str. 91001 section 15 of 16 of the complete genome Length = 293371 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 gcatgatgatgatttggtgt 622 |||||||||||||||||||| Sbjct: 148343 gcatgatgatgatttggtgt 148324
>ref|XM_461614.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G02046g) partial mRNA Length = 1383 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 157 gctaagaagtatgatttggaagcatggttccc 188 ||||||||||| || || |||||||||||||| Sbjct: 1045 gctaagaagtacgacttagaagcatggttccc 1076
>ref|XM_461964.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G10439g) partial mRNA Length = 3006 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 aagaagtatgatttggaagc 179 |||||||||||||||||||| Sbjct: 2899 aagaagtatgatttggaagc 2918
>gb|AC119982.6| Mus musculus chromosome 19, clone RP24-498L9, complete sequence Length = 177924 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 aaagaatgatgagcaatcca 295 |||||||||||||||||||| Sbjct: 144622 aaagaatgatgagcaatcca 144603
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 attaaaaatgcagaagattt 89 |||||||||||||||||||| Sbjct: 330698 attaaaaatgcagaagattt 330679
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research Institute) complete sequence Length = 236662 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 aaacaagctgctgctgactc 479 |||||||||||||||||||| Sbjct: 208659 aaacaagctgctgctgactc 208640
>gb|DQ508104.1| Homo sapiens mitogen-activated protein kinase 1 (MAPK1) gene, complete cds Length = 111954 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 taaaccaaagggaaatgcgg 514 |||||||||||||||||||| Sbjct: 104766 taaaccaaagggaaatgcgg 104747
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 gcatgatgatgatttggtgt 622 |||||||||||||||||||| Sbjct: 4114323 gcatgatgatgatttggtgt 4114304
>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence Length = 200807 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tgaggagatgattaaaaatgcaga 83 ||||||||| |||||||||||||| Sbjct: 137530 tgaggagattattaaaaatgcaga 137507
>ref|XM_669976.1| Plasmodium berghei strain ANKA hypothetical protein (PB103700.00.0) partial mRNA Length = 1828 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 atccttcctttttattaatt 587 |||||||||||||||||||| Sbjct: 1738 atccttcctttttattaatt 1719
>gb|AC124973.8| Mus musculus strain C57BL/6J clone rp23-329l13 map 19, complete sequence Length = 199006 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 aaagaatgatgagcaatcca 295 |||||||||||||||||||| Sbjct: 193570 aaagaatgatgagcaatcca 193589
>emb|BX293995.4| Human DNA sequence from clone RP11-143H17 on chromosome X Contains the 3' end of a novel gene (C6.1A) and a phosphatidylinositol binding clathrin assembly protein (PICALM) pseudogene, complete sequence Length = 74649 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 attaaaaatgcagaagattt 89 |||||||||||||||||||| Sbjct: 23827 attaaaaatgcagaagattt 23846
>emb|AL731575.3| Human DNA sequence from clone RP11-328K22 on chromosome 10 Contains a novel gene, complete sequence Length = 96212 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ttgagctgcaagaggagtga 535 |||||||||||||||||||| Sbjct: 66186 ttgagctgcaagaggagtga 66205
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 aagaagtatgatttggaagc 179 |||||||||||||||||||| Sbjct: 817952 aagaagtatgatttggaagc 817971 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 157 gctaagaagtatgatttggaagcatggttccc 188 ||||||||||| || || |||||||||||||| Sbjct: 142595 gctaagaagtacgacttagaagcatggttccc 142564
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 gcatgatgatgatttggtgt 622 |||||||||||||||||||| Sbjct: 731590 gcatgatgatgatttggtgt 731609
>gb|AC164250.4| Mus musculus BAC RP24-327O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221612 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 gatgattaaaaatgcagaagatttttatcagg 97 ||||||||||||||| ||| |||||| ||||| Sbjct: 141177 gatgattaaaaatgctgaacatttttttcagg 141146
>emb|AJ414143.1| Yersinia pestis strain CO92 complete genome; segment 3/20 Length = 201050 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 gcatgatgatgatttggtgt 622 |||||||||||||||||||| Sbjct: 2280 gcatgatgatgatttggtgt 2299
>emb|AJ719861.1| Gallus gallus mRNA for hypothetical protein, clone 7f20 Length = 3365 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gttgaggtgccagtggtgtt 404 |||||||||||||||||||| Sbjct: 1187 gttgaggtgccagtggtgtt 1168
>gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosome 3, complete sequence Length = 174425 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 tgttttggttacaaagtatt 653 |||||||||||||||||||| Sbjct: 7688 tgttttggttacaaagtatt 7707
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tgattaaaaatgcagaagat 87 |||||||||||||||||||| Sbjct: 922695 tgattaaaaatgcagaagat 922714
>gb|AY119252.1| Drosophila melanogaster SD21818 full insert cDNA Length = 1482 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 aattgcactgattatcaggcaagg 249 |||||||| ||||||||||||||| Sbjct: 1147 aattgcacggattatcaggcaagg 1170
>emb|CR606072.1| full-length cDNA clone CS0DI007YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2359 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 taaaccaaagggaaatgcgg 514 |||||||||||||||||||| Sbjct: 141 taaaccaaagggaaatgcgg 122
>ref|NM_079641.2| Drosophila melanogaster Seryl-tRNA synthetase CG4938-RA (Aats-ser), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 aattgcactgattatcaggcaagg 249 |||||||| ||||||||||||||| Sbjct: 1148 aattgcacggattatcaggcaagg 1171
>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete sequence Length = 157571 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 acaagctgctgctgactcca 481 |||||||||||||||||||| Sbjct: 117388 acaagctgctgctgactcca 117369
>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence Length = 188292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tgaggagatgattaaaaatg 79 |||||||||||||||||||| Sbjct: 31204 tgaggagatgattaaaaatg 31185
>gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosome 14, complete sequence Length = 216848 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 ctgaaaattgtttccaggca 556 |||||||||||||||||||| Sbjct: 154865 ctgaaaattgtttccaggca 154846
>gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5, partial sequence Length = 166617 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 ctgaaaattgtttccaggca 556 |||||||||||||||||||| Sbjct: 54513 ctgaaaattgtttccaggca 54494
>emb|BX294126.10| Zebrafish DNA sequence from clone DKEYP-35B8 in linkage group 2, complete sequence Length = 179476 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tctgtagcatgatgatgatt 616 |||||||||||||||||||| Sbjct: 18867 tctgtagcatgatgatgatt 18886
>emb|BX890566.8| Mouse DNA sequence from clone RP23-342I1 on chromosome X, complete sequence Length = 173737 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctgggaaatgcatgaggaga 67 |||||||||||||||||||| Sbjct: 85155 ctgggaaatgcatgaggaga 85174
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 aattgcactgattatcaggcaagg 249 |||||||| ||||||||||||||| Sbjct: 100889 aattgcacggattatcaggcaagg 100912
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 aattgcactgattatcaggcaagg 249 |||||||| ||||||||||||||| Sbjct: 983 aattgcacggattatcaggcaagg 1006
>ref|NM_204661.1| Gallus gallus ovomucin alpha-subunit (LOC395381), mRNA Length = 6558 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgctcttaatgatgctgcag 157 |||||||||||||||||||| Sbjct: 3198 tgctcttaatgatgctgcag 3179
>dbj|AB046524.1| Gallus gallus mRNA for ovomucin alpha-subunit, complete cds Length = 6558 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgctcttaatgatgctgcag 157 |||||||||||||||||||| Sbjct: 3198 tgctcttaatgatgctgcag 3179
>gb|AC073069.6| Homo sapiens BAC clone RP11-173N21 from 2, complete sequence Length = 85787 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 ctttttattaatttctgagt 594 |||||||||||||||||||| Sbjct: 82932 ctttttattaatttctgagt 82913
>gb|AC129948.3| Branchiostoma floridae, clone -33B4, complete sequence Length = 66265 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tgggaaatgcatgaggagat 68 |||||||||||||||||||| Sbjct: 35808 tgggaaatgcatgaggagat 35789
>gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromosome ul, complete sequence Length = 197416 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ctgactccaagcccaacaag 492 |||||||||||||||||||| Sbjct: 40883 ctgactccaagcccaacaag 40864
>emb|BX548004.7| Mouse DNA sequence from clone RP23-334I1 on chromosome X, complete sequence Length = 107181 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ctgggaaatgcatgaggaga 67 |||||||||||||||||||| Sbjct: 97458 ctgggaaatgcatgaggaga 97439
>gb|AC063919.15| Homo sapiens 3 BAC RP11-71E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151196 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 ggcttgagctgcaagaggag 532 |||||||||||||||||||| Sbjct: 50338 ggcttgagctgcaagaggag 50357
>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20, complete sequence Length = 201942 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 tatggccagaaaaagaatgatgag 288 |||||||| ||||||||||||||| Sbjct: 194811 tatggccataaaaagaatgatgag 194834
>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete sequence Length = 173847 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 attaaaaatgcagaagattt 89 |||||||||||||||||||| Sbjct: 148835 attaaaaatgcagaagattt 148816
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 aattgcactgattatcaggcaagg 249 |||||||| ||||||||||||||| Sbjct: 145321 aattgcacggattatcaggcaagg 145344
>gb|AC171061.3| Gallus gallus BAC clone TAM32-9O12 from chromosome ul, complete sequence Length = 131280 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ctgactccaagcccaacaag 492 |||||||||||||||||||| Sbjct: 58269 ctgactccaagcccaacaag 58250
>dbj|AP003024.2| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2336M19, complete sequence Length = 39000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 agcagttctgtgccacaaat 30 |||||||||||||||||||| Sbjct: 28887 agcagttctgtgccacaaat 28868
>emb|CT033779.9| Mouse DNA sequence from clone RP24-230F21 on chromosome 9, complete sequence Length = 161997 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 gatgattaaaaatgcagaagatttttatcagg 97 |||||||||||||| |||| |||||| ||||| Sbjct: 81648 gatgattaaaaatgtagaacatttttctcagg 81617
>emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 map Xq28, complete sequence Length = 117521 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 attaaaaatgcagaagattt 89 |||||||||||||||||||| Sbjct: 67209 attaaaaatgcagaagattt 67190
>gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosome 3, complete sequence Length = 143247 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 tgttttggttacaaagtatt 653 |||||||||||||||||||| Sbjct: 72435 tgttttggttacaaagtatt 72416
>gb|AC140231.3| Mus musculus BAC clone RP24-493L15 from 6, complete sequence Length = 185517 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 gatgattaaaaatgcagaagatttttatcagg 97 ||||||||||||||| ||| |||||| ||||| Sbjct: 167183 gatgattaaaaatgctgaacatttttttcagg 167214
>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence Length = 171374 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 gatgattaaaaatgcagaagatttttatcagg 97 |||||||||||||| |||| |||||| ||||| Sbjct: 13879 gatgattaaaaatgtagaacatttttctcagg 13848
>emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chromosome 2, complete sequence Length = 107108 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 627 ttttggatgttttggttacaaagt 650 ||||||||||||| |||||||||| Sbjct: 59439 ttttggatgtttttgttacaaagt 59416
>emb|AL929116.4| Zebrafish DNA sequence from clone CH211-193C7, complete sequence Length = 126123 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tctgtagcatgatgatgatt 616 |||||||||||||||||||| Sbjct: 96574 tctgtagcatgatgatgatt 96593
>emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2128A3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 103601 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 atgaggagatgattaaaaat 78 |||||||||||||||||||| Sbjct: 52642 atgaggagatgattaaaaat 52623
>emb|Y14823.1|DMSURF4 Drosophila melanogaster SURF-4 gene and gene encoding seryl-tRNA synthetase Length = 5991 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 aattgcactgattatcaggcaagg 249 |||||||| ||||||||||||||| Sbjct: 5009 aattgcacggattatcaggcaagg 4986
>dbj|AP000555.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region, clone:KB1027C11 Length = 168813 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 taaaccaaagggaaatgcgg 514 |||||||||||||||||||| Sbjct: 3288 taaaccaaagggaaatgcgg 3307 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,587,167 Number of Sequences: 3902068 Number of extensions: 7587167 Number of successful extensions: 144379 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 143840 Number of HSP's gapped (non-prelim): 532 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
