ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39j04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471066.1| Oryza sativa (japonica cultivar-group), predic... 424 e-116
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 424 e-116
3dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-116
4emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 424 e-116
5gb|AY103738.1| Zea mays PCO146589 mRNA sequence 365 7e-98
6gb|BT018932.1| Zea mays clone Contig65.F mRNA sequence 276 5e-71
7dbj|AP006636.1| Lotus japonicus genomic DNA, chromosome 3, clone... 165 1e-37
8gb|BT012988.1| Lycopersicon esculentum clone 114208R, mRNA sequence 121 2e-24
9ref|NM_099991.2| Arabidopsis thaliana PDH-E1 ALPHA (PYRUVATE DEH... 109 7e-21
10gb|U80185.1|ATU80185 Arabidopsis thaliana pyruvate dehydrogenase... 109 7e-21
11gb|AF358778.1| Oryza sativa clone Osch141 pyruvate dehydrogenase... 109 7e-21
12gb|AY063724.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, com... 109 7e-21
13gb|AY052721.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, com... 109 7e-21
14emb|BX813802.1|CNS0ADI5 Arabidopsis thaliana Full-length cDNA Co... 109 7e-21
15emb|BX818597.1|CNS0ACON Arabidopsis thaliana Full-length cDNA Co... 109 7e-21
16emb|BX815751.1|CNS0ACSX Arabidopsis thaliana Full-length cDNA Co... 109 7e-21
17emb|BX815342.1|CNS0ACRT Arabidopsis thaliana Full-length cDNA Co... 109 7e-21
18gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana... 109 7e-21
19emb|BX815365.1|CNS0ACRU Arabidopsis thaliana Full-length cDNA Co... 96 1e-16
20gb|CP000097.1| Synechococcus sp. CC9902, complete genome 76 9e-11
21emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome;... 72 1e-09
22dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 68 2e-08
23gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 68 2e-08
24emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen... 66 9e-08
25gb|CP000110.1| Synechococcus sp. CC9605, complete genome 62 1e-06
26dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 62 1e-06
27gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 58 2e-05
28dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 50 0.005
29gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 46 0.085
30gb|DQ366727.1| Uncultured Prochlorococcus marinus clone HF10-88G... 44 0.34
31gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome ... 42 1.3
32dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 42 1.3
33emb|AL845298.5| Mouse DNA sequence from clone RP23-280N11 on chr... 42 1.3
34gb|AC113901.7| Rattus norvegicus 2 BAC CH230-328F5 (Children's H... 40 5.2
35gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.2
36gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, com... 40 5.2
37gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, com... 40 5.2
38gb|AF003383.1| Caenorhabditis elegans cosmid ZC250, complete seq... 40 5.2
39gb|AC133601.3| Mus musculus BAC clone RP24-179O1 from chromosome... 40 5.2
40emb|X62658.1|EFSEA1 E.faecalis plasmid pAD1 sea1 gene and orfy 40 5.2
41gb|AC124489.2| Mus musculus BAC clone RP23-453H5 from chromosome... 40 5.2
42gb|AC144514.10| Medicago truncatula clone mth2-12j2, complete se... 40 5.2
43gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete s... 40 5.2
44gb|AC135467.15| Medicago truncatula clone mth2-34h12, complete s... 40 5.2
45emb|Z68285.2|HSN11D4 Human DNA sequence from clone LL22NC03-11D4... 40 5.2
46gb|AF503504.2| Photorhabdus luminescens MtaD-like protein gene, ... 40 5.2
47gb|AY855841.2| Enterococcus faecalis plasmid pCF10, complete seq... 40 5.2
48gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Can... 40 5.2
49gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complet... 40 5.2
50gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 5.2
51gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence 40 5.2
52gb|AC155322.5| Mus musculus 10 BAC RP24-149J3 (Roswell Park Canc... 40 5.2
53ref|NM_072119.1| Caenorhabditis elegans ZC250.2 (ZC250.2) mRNA, ... 40 5.2
54gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5... 40 5.2
55gb|AC158634.5| Mus musculus 10 BAC RP23-424C16 (Roswell Park Can... 40 5.2
56gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome... 40 5.2
57gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complet... 40 5.2
58gb|AE016833.1| Enterococcus faecalis V583 plasmid pTEF1, complet... 40 5.2
59gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 5.2
60gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complet... 40 5.2
61emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 5.2 
>ref|XM_471066.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score =  424 bits (214), Expect = e-116
 Identities = 328/366 (89%)
 Strand = Plus / Plus

                                                                       
Query: 23  gctgcctttgccgctaagtaccgccatgaggtgctcaagcagtctagccctggtgggctt 82
           ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 586 gctgcctttgctgctaaataccgccatgaggtgctcaagcagtctagccctgatggactt 645

                                                                       
Query: 83  gatgtcacgcttgcattctttggggacggtacttgtaacaacggccagttctttgagtgc 142
           ||||| || || ||||||||||| || ||||| |||||||| ||||| ||||||||||||
Sbjct: 646 gatgtaaccctggcattctttggtgatggtacctgtaacaatggccaattctttgagtgc 705

                                                                       
Query: 143 ctgaacatggctcagctgtggaagcttccgattatttttgttgtggagaacaacctatgg 202
           ||||||||||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||
Sbjct: 706 ctgaacatggctcagctttggaagcttcctattgtgtttgttgtggagaacaatctatgg 765

                                                                       
Query: 203 gcaatcgggatgtcccaccttaggtctacttcagatcccgagatctggaagaagggcccc 262
           ||||| |||||||| || |||||| |||||||||| || ||||| |  |||||||| || 
Sbjct: 766 gcaattgggatgtcgcatcttagggctacttcagacccagagatttataagaagggtcca 825

                                                                       
Query: 263 gcatttggaatgcctggtgtacatgtcgatgggatggatgtcctgaaggtcagggaggtg 322
           || ||||||||||| || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 826 gcgtttggaatgcccggcgtgcatgttgatgggatggatgtcctgaaggtcagggaggtg 885

                                                                       
Query: 323 gctaaggaggccattgacagggcaaggagaggtgaaggaccaactctagtggaatgtgaa 382
           ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| 
Sbjct: 886 gctaaggaggccattgagagggcaaggagaggtgaaggaccgactcttgtggagtgtgag 945

                 
Query: 383 acttac 388
           ||||||
Sbjct: 946 acttac 951
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  424 bits (214), Expect = e-116
 Identities = 328/366 (89%)
 Strand = Plus / Plus

                                                                           
Query: 23      gctgcctttgccgctaagtaccgccatgaggtgctcaagcagtctagccctggtgggctt 82
               ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1124583 gctgcctttgctgctaaataccgccatgaggtgctcaagcagtctagccctgatggactt 1124642

                                                                           
Query: 83      gatgtcacgcttgcattctttggggacggtacttgtaacaacggccagttctttgagtgc 142
               ||||| || || ||||||||||| || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1124643 gatgtaaccctggcattctttggtgatggtacctgtaacaatggccaattctttgagtgc 1124702

                                                                           
Query: 143     ctgaacatggctcagctgtggaagcttccgattatttttgttgtggagaacaacctatgg 202
               ||||||||||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||
Sbjct: 1124703 ctgaacatggctcagctttggaagcttcctattgtgtttgttgtggagaacaatctatgg 1124762

                                                                           
Query: 203     gcaatcgggatgtcccaccttaggtctacttcagatcccgagatctggaagaagggcccc 262
               ||||| |||||||| || |||||| |||||||||| || ||||| |  |||||||| || 
Sbjct: 1124763 gcaattgggatgtcgcatcttagggctacttcagacccagagatttataagaagggtcca 1124822

                                                                           
Query: 263     gcatttggaatgcctggtgtacatgtcgatgggatggatgtcctgaaggtcagggaggtg 322
               || ||||||||||| || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1124823 gcgtttggaatgcccggcgtgcatgttgatgggatggatgtcctgaaggtcagggaggtg 1124882

                                                                           
Query: 323     gctaaggaggccattgacagggcaaggagaggtgaaggaccaactctagtggaatgtgaa 382
               ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| 
Sbjct: 1124883 gctaaggaggccattgagagggcaaggagaggtgaaggaccgactcttgtggagtgtgag 1124942

                     
Query: 383     acttac 388
               ||||||
Sbjct: 1124943 acttac 1124948
to top
>dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012M21, full
            insert sequence
          Length = 1736

 Score =  424 bits (214), Expect = e-116
 Identities = 328/366 (89%)
 Strand = Plus / Plus

                                                                        
Query: 23   gctgcctttgccgctaagtaccgccatgaggtgctcaagcagtctagccctggtgggctt 82
            ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 726  gctgcctttgctgctaaataccgccatgaggtgctcaagcagtctagccctgatggactt 785

                                                                        
Query: 83   gatgtcacgcttgcattctttggggacggtacttgtaacaacggccagttctttgagtgc 142
            ||||| || || ||||||||||| || ||||| |||||||| ||||| ||||||||||||
Sbjct: 786  gatgtaaccctggcattctttggtgatggtacctgtaacaatggccaattctttgagtgc 845

                                                                        
Query: 143  ctgaacatggctcagctgtggaagcttccgattatttttgttgtggagaacaacctatgg 202
            ||||||||||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||
Sbjct: 846  ctgaacatggctcagctttggaagcttcctattgtgtttgttgtggagaacaatctatgg 905

                                                                        
Query: 203  gcaatcgggatgtcccaccttaggtctacttcagatcccgagatctggaagaagggcccc 262
            ||||| |||||||| || |||||| |||||||||| || ||||| |  |||||||| || 
Sbjct: 906  gcaattgggatgtcgcatcttagggctacttcagacccagagatttataagaagggtcca 965

                                                                        
Query: 263  gcatttggaatgcctggtgtacatgtcgatgggatggatgtcctgaaggtcagggaggtg 322
            || ||||||||||| || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 966  gcgtttggaatgcccggcgtgcatgttgatgggatggatgtcctgaaggtcagggaggtg 1025

                                                                        
Query: 323  gctaaggaggccattgacagggcaaggagaggtgaaggaccaactctagtggaatgtgaa 382
            ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| 
Sbjct: 1026 gctaaggaggccattgagagggcaaggagaggtgaaggaccgactcttgtggagtgtgag 1085

                  
Query: 383  acttac 388
            ||||||
Sbjct: 1086 acttac 1091
to top
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score =  424 bits (214), Expect = e-116
 Identities = 328/366 (89%)
 Strand = Plus / Plus

                                                                         
Query: 23    gctgcctttgccgctaagtaccgccatgaggtgctcaagcagtctagccctggtgggctt 82
             ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 66965 gctgcctttgctgctaaataccgccatgaggtgctcaagcagtctagccctgatggactt 67024

                                                                         
Query: 83    gatgtcacgcttgcattctttggggacggtacttgtaacaacggccagttctttgagtgc 142
             ||||| || || ||||||||||| || ||||| |||||||| ||||| ||||||||||||
Sbjct: 67025 gatgtaaccctggcattctttggtgatggtacctgtaacaatggccaattctttgagtgc 67084

                                                                         
Query: 143   ctgaacatggctcagctgtggaagcttccgattatttttgttgtggagaacaacctatgg 202
             ||||||||||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||
Sbjct: 67085 ctgaacatggctcagctttggaagcttcctattgtgtttgttgtggagaacaatctatgg 67144

                                                                         
Query: 203   gcaatcgggatgtcccaccttaggtctacttcagatcccgagatctggaagaagggcccc 262
             ||||| |||||||| || |||||| |||||||||| || ||||| |  |||||||| || 
Sbjct: 67145 gcaattgggatgtcgcatcttagggctacttcagacccagagatttataagaagggtcca 67204

                                                                         
Query: 263   gcatttggaatgcctggtgtacatgtcgatgggatggatgtcctgaaggtcagggaggtg 322
             || ||||||||||| || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 67205 gcgtttggaatgcccggcgtgcatgttgatgggatggatgtcctgaaggtcagggaggtg 67264

                                                                         
Query: 323   gctaaggaggccattgacagggcaaggagaggtgaaggaccaactctagtggaatgtgaa 382
             ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| 
Sbjct: 67265 gctaaggaggccattgagagggcaaggagaggtgaaggaccgactcttgtggagtgtgag 67324

                   
Query: 383   acttac 388
             ||||||
Sbjct: 67325 acttac 67330
to top
>gb|AY103738.1| Zea mays PCO146589 mRNA sequence
          Length = 1787

 Score =  365 bits (184), Expect = 7e-98
 Identities = 332/380 (87%), Gaps = 1/380 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   gccactggtcgctgcctttgccgctaagtaccgccatgaggtgctcaagcagtctagccc 72
            ||||||||| || |||||||| ||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 835  gccactggt-gcagcctttgctgctaagtaccgtcatgaggtgctcaaggagtctggccc 893

                                                                        
Query: 73   tggtgggcttgatgtcacgcttgcattctttggggacggtacttgtaacaacggccagtt 132
            || |||||||||||||||  | || |||||||| || ||||| ||||| || ||||||||
Sbjct: 894  tgatgggcttgatgtcacattggcgttctttggcgatggtacctgtaataatggccagtt 953

                                                                        
Query: 133  ctttgagtgcctgaacatggctcagctgtggaagcttccgattatttttgttgtggagaa 192
            ||||||||| ||||||||||| ||||| ||||||||||| ||| | ||||||||||||||
Sbjct: 954  ctttgagtgtctgaacatggcacagctttggaagcttcctattgtgtttgttgtggagaa 1013

                                                                        
Query: 193  caacctatgggcaatcgggatgtcccaccttaggtctacttcagatcccgagatctggaa 252
             ||||| |||||||| || ||||| ||| ||||| |||| || || || ||||| |||||
Sbjct: 1014 taacctgtgggcaattggaatgtcacacattagggctacatcggacccagagatttggaa 1073

                                                                        
Query: 253  gaagggccccgcatttggaatgcctggtgtacatgtcgatgggatggatgtcctgaaggt 312
            |||||| || ||||||||||||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 1074 gaaggggccagcatttggaatgcctggggtgcatgttgatggtatggatgtcctgaaggt 1133

                                                                        
Query: 313  cagggaggtggctaaggaggccattgacagggcaaggagaggtgaaggaccaactctagt 372
            ||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 1134 cagggaggttgctaaggaggcaattgagagggcaaggagaggtgaagggccaaccctagt 1193

                                
Query: 373  ggaatgtgaaacttacaggt 392
             || |||||||| |||||||
Sbjct: 1194 cgagtgtgaaacatacaggt 1213
to top
>gb|BT018932.1| Zea mays clone Contig65.F mRNA sequence
          Length = 851

 Score =  276 bits (139), Expect = 5e-71
 Identities = 247/283 (87%)
 Strand = Plus / Plus

                                                                       
Query: 110 ggtacttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagctt 169
           ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 9   ggtacctgtaataatggccagttctttgagtgtctgaacatggcacagctttggaagctt 68

                                                                       
Query: 170 ccgattatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtct 229
           || ||| | |||||||||||||| ||||| |||||||| || ||||| ||| ||||| ||
Sbjct: 69  cctattgtgtttgttgtggagaataacctgtgggcaattggaatgtcacacattagggct 128

                                                                       
Query: 230 acttcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtc 289
           || || || || ||||| ||||||||||| || ||||||||||||||||| || ||||| 
Sbjct: 129 acatcggacccagagatttggaagaaggggccagcatttggaatgcctggggtgcatgtt 188

                                                                       
Query: 290 gatgggatggatgtcctgaaggtcagggaggtggctaaggaggccattgacagggcaagg 349
           ||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 189 gatggtatggatgtcctgaaggtcagggaggttgctaaggaggcaattgagagggcaagg 248

                                                      
Query: 350 agaggtgaaggaccaactctagtggaatgtgaaacttacaggt 392
           ||||| ||||| ||||| ||||| || |||||||| |||||||
Sbjct: 249 agaggggaagggccaaccctagtcgagtgtgaaacatacaggt 291
to top
>dbj|AP006636.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208a,
             complete sequence
          Length = 32967

 Score =  165 bits (83), Expect = 1e-37
 Identities = 236/287 (82%)
 Strand = Plus / Plus

                                                                         
Query: 95    gcattctttggggacggtacttgtaacaacggccagttctttgagtgcctgaacatggct 154
             ||||||||||| || || ||||||||||| || ||||||| ||| ||||| |||||||||
Sbjct: 19241 gcattctttggagatggaacttgtaacaatggacagttctatgaatgccttaacatggct 19300

                                                                         
Query: 155   cagctgtggaagcttccgattatttttgttgtggagaacaacctatgggcaatcgggatg 214
                 |||||||| | || ||| | ||||| ||||| || ||  | ||||| || ||||||
Sbjct: 19301 gctttgtggaagttgccaattgtgtttgtggtggaaaataatttgtgggccattgggatg 19360

                                                                         
Query: 215   tcccaccttaggtctacttcagatcccgagatctggaagaagggccccgcatttggaatg 274
             || || || ||| | ||||||||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 19361 tcacatctcagggcaacttcagatcctgagatatggaaaaaggggccagcatttggaatg 19420

                                                                         
Query: 275   cctggtgtacatgtcgatgggatggatgtcctgaaggtcagggaggtggctaaggaggcc 334
             || || || ||||| || |||||||| ||  ||||||||||||||||||| |||||||| 
Sbjct: 19421 ccaggggttcatgtagacgggatggacgttttgaaggtcagggaggtggcaaaggaggcg 19480

                                                            
Query: 335   attgacagggcaaggagaggtgaaggaccaactctagtggaatgtga 381
             ||||  ||||| || ||||| || |||||||||||||||||||||||
Sbjct: 19481 attggaagggctagaagaggagagggaccaactctagtggaatgtga 19527
to top
>gb|BT012988.1| Lycopersicon esculentum clone 114208R, mRNA sequence
          Length = 1692

 Score =  121 bits (61), Expect = 2e-24
 Identities = 190/233 (81%)
 Strand = Plus / Plus

                                                                        
Query: 98   ttctttggggacggtacttgtaacaacggccagttctttgagtgcctgaacatggctcag 157
            |||||||| || || ||||| ||||| |||||||||||||||||  |||||||||||   
Sbjct: 819  ttctttggtgatggaacttgcaacaatggccagttctttgagtgtttgaacatggctgct 878

                                                                        
Query: 158  ctgtggaagcttccgattatttttgttgtggagaacaacctatgggcaatcgggatgtcc 217
            || |||||  | || ||||| |||||||| ||||||||  | |||||||| || ||||| 
Sbjct: 879  ctttggaaattgcccattatatttgttgttgagaacaatttgtgggcaattggaatgtct 938

                                                                        
Query: 218  caccttaggtctacttcagatcccgagatctggaagaagggccccgcatttggaatgcct 277
            ||| | || |||||||||||||| || || |||||||| || ||||| || || ||||||
Sbjct: 939  cacttgagatctacttcagatcctgaaatttggaagaaaggtcccgccttcgggatgcct 998

                                                                 
Query: 278  ggtgtacatgtcgatgggatggatgtcctgaaggtcagggaggtggctaagga 330
            || || ||||| ||||| ||||||||  ||||||| |||||||| || |||||
Sbjct: 999  ggggttcatgttgatggcatggatgtgttgaaggtgagggaggtagcaaagga 1051
to top
>ref|NM_099991.2| Arabidopsis thaliana PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA);
            oxidoreductase, acting on the aldehyde or oxo group of
            donors, disulfide as acc> AT1G01090 (PDH-E1 ALPHA) mRNA,
            complete cds
          Length = 1620

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 113  acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
            |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 798  acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 857

                                                                        
Query: 173  attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
            ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 858  attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 917

                                                                        
Query: 233  tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
            || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 918  tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 977

                                               
Query: 293  gggatggatgtcctgaaggtcagggaggtggctaa 327
            || ||||||||| ||||||||||||| || |||||
Sbjct: 978  ggtatggatgtcttgaaggtcagggaagtcgctaa 1012
to top
>gb|U80185.1|ATU80185 Arabidopsis thaliana pyruvate dehydrogenase E1 alpha subunit mRNA,
            nuclear gene encoding plastid protein, complete cds
          Length = 1541

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 113  acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
            |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 802  acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 861

                                                                        
Query: 173  attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
            ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 862  attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 921

                                                                        
Query: 233  tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
            || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 922  tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 981

                                               
Query: 293  gggatggatgtcctgaaggtcagggaggtggctaa 327
            || ||||||||| ||||||||||||| || |||||
Sbjct: 982  ggtatggatgtcttgaaggtcagggaagtcgctaa 1016
to top
>gb|AF358778.1| Oryza sativa clone Osch141 pyruvate dehydrogenase E1 alpha subunit
           mRNA, partial cds
          Length = 380

 Score =  109 bits (55), Expect = 7e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 23  gctgcctttgccgctaagtaccgccatgaggtgctcaagcagtctagccctggtgggctt 82
           ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 291 gctgcctttgctgctaaataccgccatgaggtgctcaagcagtctagccctgatggactt 350

                                  
Query: 83  gatgtcacgcttgcattctttgg 105
           ||||| || || |||||||||||
Sbjct: 351 gatgtaaccctggcattctttgg 373
to top
>gb|AY063724.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, complete cds
          Length = 1287

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 113 acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
           |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 685 acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 744

                                                                       
Query: 173 attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
           ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 745 attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 804

                                                                       
Query: 233 tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
           || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 805 tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 864

                                              
Query: 293 gggatggatgtcctgaaggtcagggaggtggctaa 327
           || ||||||||| ||||||||||||| || |||||
Sbjct: 865 ggtatggatgtcttgaaggtcagggaagtcgctaa 899
to top
>gb|AY052721.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, complete cds
          Length = 1610

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 113  acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
            |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 800  acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 859

                                                                        
Query: 173  attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
            ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 860  attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 919

                                                                        
Query: 233  tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
            || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 920  tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 979

                                               
Query: 293  gggatggatgtcctgaaggtcagggaggtggctaa 327
            || ||||||||| ||||||||||||| || |||||
Sbjct: 980  ggtatggatgtcttgaaggtcagggaagtcgctaa 1014
to top
>emb|BX813802.1|CNS0ADI5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZG10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1436

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 113 acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
           |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 775 acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 834

                                                                       
Query: 173 attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
           ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 835 attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 894

                                                                       
Query: 233 tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
           || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 895 tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 954

                                              
Query: 293 gggatggatgtcctgaaggtcagggaggtggctaa 327
           || ||||||||| ||||||||||||| || |||||
Sbjct: 955 ggtatggatgtcttgaaggtcagggaagtcgctaa 989
to top
>emb|BX818597.1|CNS0ACON Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL87ZB08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1431

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 113 acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
           |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 745 acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 804

                                                                       
Query: 173 attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
           ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 805 attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 864

                                                                       
Query: 233 tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
           || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 865 tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 924

                                              
Query: 293 gggatggatgtcctgaaggtcagggaggtggctaa 327
           || ||||||||| ||||||||||||| || |||||
Sbjct: 925 ggtatggatgtcttgaaggtcagggaagtcgctaa 959
to top
>emb|BX815751.1|CNS0ACSX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS90ZB04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1472

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 113  acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
            |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 786  acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 845

                                                                        
Query: 173  attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
            ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 846  attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 905

                                                                        
Query: 233  tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
            || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 906  tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 965

                                               
Query: 293  gggatggatgtcctgaaggtcagggaggtggctaa 327
            || ||||||||| ||||||||||||| || |||||
Sbjct: 966  ggtatggatgtcttgaaggtcagggaagtcgctaa 1000
to top
>emb|BX815342.1|CNS0ACRT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS53ZG06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1557

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 113  acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
            |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 791  acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 850

                                                                        
Query: 173  attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
            ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 851  attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 910

                                                                        
Query: 233  tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
            || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 911  tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 970

                                               
Query: 293  gggatggatgtcctgaaggtcagggaggtggctaa 327
            || ||||||||| ||||||||||||| || |||||
Sbjct: 971  ggtatggatgtcttgaaggtcagggaagtcgctaa 1005
to top
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I,
             complete sequence
          Length = 86436

 Score =  109 bits (55), Expect = 7e-21
 Identities = 175/215 (81%)
 Strand = Plus / Minus

                                                                         
Query: 113   acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
             |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 48101 acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 48042

                                                                         
Query: 173   attatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctact 232
             ||||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | |||
Sbjct: 48041 attatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccact 47982

                                                                         
Query: 233   tcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcgat 292
             || || |||||||| |||||||| || || |||||||| ||||||||||| ||||| || 
Sbjct: 47981 tctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttgac 47922

                                                
Query: 293   gggatggatgtcctgaaggtcagggaggtggctaa 327
             || ||||||||| ||||||||||||| || |||||
Sbjct: 47921 ggtatggatgtcttgaaggtcagggaagtcgctaa 47887
to top
>emb|BX815365.1|CNS0ACRU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS55ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1441

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 175/216 (81%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 acttgtaacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccg 172
           |||||||||||||| |||||||| ||||| || |||||||||   || |  || || || 
Sbjct: 767 acttgtaacaacggacagttcttcgagtgtctcaacatggctgctctctataaactgcct 826

                                                                       
Query: 173 a-ttatttttgttgtggagaacaacctatgggcaatcgggatgtcccaccttaggtctac 231
           | |||| |||||||| ||||| ||| | ||||| || |||||||| ||| | ||  | ||
Sbjct: 827 aattatctttgttgtcgagaataacttgtgggccattgggatgtctcacttgagagccac 886

                                                                       
Query: 232 ttcagatcccgagatctggaagaagggccccgcatttggaatgcctggtgtacatgtcga 291
           ||| || |||||||| |||||||| || || |||||||| ||||||||||| ||||| ||
Sbjct: 887 ttctgaccccgagatttggaagaaaggtcctgcatttgggatgcctggtgttcatgttga 946

                                               
Query: 292 tgggatggatgtcctgaaggtcagggaggtggctaa 327
            || ||||||||| ||||||||||||| || |||||
Sbjct: 947 cggtatggatgtcttgaaggtcagggaagtcgctaa 982
to top
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 104/126 (82%)
 Strand = Plus / Plus

                                                                           
Query: 95      gcattctttggggacggtacttgtaacaacggccagttctttgagtgcctgaacatggct 154
               ||||| ||||| ||||| || || ||||||||||||||||| || ||  |||||||||| 
Sbjct: 1469994 gcattttttggagacggcacctgcaacaacggccagttcttcgaatgtttgaacatggcc 1470053

                                                                           
Query: 155     cagctgtggaagcttccgattatttttgttgtggagaacaacctatgggcaatcgggatg 214
               ||  ||||||| || |||||  |||||||||| |||||||||  |||||| ||||| |||
Sbjct: 1470054 caattgtggaaactaccgatcctttttgttgttgagaacaacaaatgggccatcggaatg 1470113

                     
Query: 215     tcccac 220
                |||||
Sbjct: 1470114 gcccac 1470119
to top
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7
          Length = 349323

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 101   tttggggacggtacttgtaacaacggccagttctttgagtgcctgaacatggctcagctg 160
             ||||| |||||||| || || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 46289 tttggtgacggtacctgcaataacggccagttctttgagtgcctcaacatggcgcagctt 46230

                     
Query: 161   tggaagct 168
             ||| ||||
Sbjct: 46229 tggcagct 46222
to top
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                           
Query: 118     taacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccgattat 177
               |||||||||||||||||| || ||| ||||||||||   ||| |||||| | |||||  |
Sbjct: 2298142 taacaacggccagttcttcgaatgcttgaacatggcgacgctctggaagttgccgatcct 2298083

                                                         
Query: 178     ttttgttgtggagaacaacctatgggcaatcgggatgtccca 219
                ||||| || |||||||||  |||||| ||||||||||||||
Sbjct: 2298082 gtttgtggtagagaacaacaaatgggcgatcgggatgtccca 2298041
to top
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                           
Query: 118     taacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccgattat 177
               |||||||||||||||||| || ||| ||||||||||   ||| |||||| | |||||  |
Sbjct: 2018895 taacaacggccagttcttcgaatgcttgaacatggcgacgctctggaagttgccgatcct 2018954

                                                         
Query: 178     ttttgttgtggagaacaacctatgggcaatcgggatgtccca 219
                ||||| || |||||||||  |||||| ||||||||||||||
Sbjct: 2018955 gtttgtggtagagaacaacaaatgggcgatcgggatgtccca 2018996
to top
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                          
Query: 119    aacaacggccagttctttgagtgcctgaacatggctcagctgtggaagcttccgattatt 178
              ||||||||||| ||||| |||||| |||||||||| ||||| |||||||| |||||  | 
Sbjct: 167905 aacaacggccaattcttcgagtgcatgaacatggcgcagctatggaagctgccgatcctg 167964

                                                       
Query: 179    tttgttgtggagaacaacctatgggcaatcgggatgtccca 219
              || || ||||| ||||||  |||||| ||||| ||| ||||
Sbjct: 167965 ttcgtggtggaaaacaacaaatgggccatcggcatggccca 168005
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                          
Query: 98     ttctttggggacggtacttgtaacaacggccagttctttgagtgcctgaacatggctcag 157
              |||||||| || || || || |||||||| ||||| || || ||| |||||||||| |||
Sbjct: 850710 ttctttggcgatggaacctgcaacaacggtcagtttttcgaatgcatgaacatggcgcag 850651

                                                     
Query: 158    ctgtggaagcttccgattatttttgttgtggagaacaac 196
              ||||||||||| ||||| || || || || |||||||||
Sbjct: 850650 ctgtggaagctgccgatcatcttcgtggtcgagaacaac 850612
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                  
Query: 119     aacaacggccagttctttgagtgcctgaacatggc 153
               ||||||||||||||||| |||||||||||||||||
Sbjct: 3031522 aacaacggccagttcttcgagtgcctgaacatggc 3031556



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 119     aacaacggccagttctttgagtgcctgaacatggc 153
               |||||||||||||| ||||||||| ||||||||||
Sbjct: 1650373 aacaacggccagttttttgagtgcttgaacatggc 1650407
to top
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete
             sequence
          Length = 132097

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                         
Query: 200   tgggcaatcgggatgtcccaccttaggtctacttcagatcccgagatctggaagaagggc 259
             ||||| || |||||||| || || ||| | ||||| |||||  |||| |||||||| |||
Sbjct: 34903 tgggctattgggatgtcgcatctcagggcaacttctgatcctcagatatggaagaaaggc 34962

                                                                  
Query: 260   cccgcatttggaatgcctggtgtacatgtcgatgggatggatgtcctgaaggt 312
             ||  ||||||||||||| || || ||||| ||||| ||||||||  |||||||
Sbjct: 34963 ccaacatttggaatgccgggggttcatgttgatggaatggatgttttgaaggt 35015
to top
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 117     gtaacaacggccagttctttgagtgcctgaacatggc 153
               |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 2230995 gtaataacggccagttttttgaatgcctgaacatggc 2231031
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 119    aacaacggccagttctttgagtgcctgaacatggc 153
              |||||||||||||||| ||| ||||| ||||||||
Sbjct: 535593 aacaacggccagttctatgaatgcctcaacatggc 535627
to top
>gb|DQ366727.1| Uncultured Prochlorococcus marinus clone HF10-88G4 genomic sequence
          Length = 36389

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                         
Query: 95    gcattctttggggacggtacttgtaacaacggccagttctttgagtgcctgaacatggct 154
             |||||||||||||| || |||||||| || || ||||| ||||| ||  | || ||||||
Sbjct: 19844 gcattctttggggatggaacttgtaataatggacagttttttgaatgtttaaatatggct 19785

                                                   
Query: 155   cagctgtggaagcttccgattatttttgttgtggagaa 192
             ||| | |||||  | || || ||||||||||| |||||
Sbjct: 19784 cagttatggaaattacccataatttttgttgttgagaa 19747
to top
>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence
          Length = 209970

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   gcttccgattatttttgttgt 186
             |||||||||||||||||||||
Sbjct: 79546 gcttccgattatttttgttgt 79526
to top
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 125     ggccagttctttgagtgcctgaacatggc 153
               |||||||||||||||||| |||| |||||
Sbjct: 1206982 ggccagttctttgagtgcttgaatatggc 1207010
to top
>emb|AL845298.5| Mouse DNA sequence from clone RP23-280N11 on chromosome 2, complete
             sequence
          Length = 213826

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   gcttccgattatttttgttgt 186
             |||||||||||||||||||||
Sbjct: 91980 gcttccgattatttttgttgt 91960
to top
>gb|AC113901.7| Rattus norvegicus 2 BAC CH230-328F5 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 157435

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    gcttccgattatttttgttgtgga 189
              |||||| |||||||||||||||||
Sbjct: 110861 gcttccaattatttttgttgtgga 110838
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 146    aacatggctcagctgtggaagcttccgattat 177
              ||||||||  ||||||||||||| ||||||||
Sbjct: 540558 aacatggccgagctgtggaagctgccgattat 540589
to top
>gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, complete sequence
          Length = 209326

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    ttgtggagaacaacctatgg 202
              ||||||||||||||||||||
Sbjct: 164547 ttgtggagaacaacctatgg 164566
to top
>gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, complete sequence
          Length = 242338

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   ttgtggagaacaacctatgg 202
             ||||||||||||||||||||
Sbjct: 30087 ttgtggagaacaacctatgg 30106
to top
>gb|AF003383.1| Caenorhabditis elegans cosmid ZC250, complete sequence
          Length = 34372

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  gattatttttgttgtggaga 191
            ||||||||||||||||||||
Sbjct: 1427 gattatttttgttgtggaga 1446
to top
>gb|AC133601.3| Mus musculus BAC clone RP24-179O1 from chromosome 18, complete sequence
          Length = 180978

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     ttgcattctttggggacggt 112
              ||||||||||||||||||||
Sbjct: 137395 ttgcattctttggggacggt 137376
to top
>emb|X62658.1|EFSEA1 E.faecalis plasmid pAD1 sea1 gene and orfy
          Length = 3839

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cttccgattatttttgttgt 186
           ||||||||||||||||||||
Sbjct: 690 cttccgattatttttgttgt 671
to top
>gb|AC124489.2| Mus musculus BAC clone RP23-453H5 from chromosome 14, complete sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   acatggctcagctgtggaag 166
             ||||||||||||||||||||
Sbjct: 41875 acatggctcagctgtggaag 41894
to top
>gb|AC144514.10| Medicago truncatula clone mth2-12j2, complete sequence
          Length = 110255

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 tctttgagtgcctgaacatg 151
           ||||||||||||||||||||
Sbjct: 991 tctttgagtgcctgaacatg 972
to top
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence
          Length = 130178

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tctttgagtgcctgaacatg 151
             ||||||||||||||||||||
Sbjct: 69725 tctttgagtgcctgaacatg 69744
to top
>gb|AC135467.15| Medicago truncatula clone mth2-34h12, complete sequence
          Length = 114945

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tctttgagtgcctgaacatg 151
             ||||||||||||||||||||
Sbjct: 77332 tctttgagtgcctgaacatg 77351
to top
>emb|Z68285.2|HSN11D4 Human DNA sequence from clone LL22NC03-11D4 on chromosome 22 Contains
             an EST and GSSs, complete sequence
          Length = 37219

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   gattatttttgttgtggagaacaa 195
             ||||||||||||||| ||||||||
Sbjct: 15824 gattatttttgttgttgagaacaa 15847
to top
>gb|AF503504.2| Photorhabdus luminescens MtaD-like protein gene, partial cds; putative
             inner membrane protein, putative efflux protein, MhpE-like
             protein, hypothetical protein, DlpA-like protein,
             CinA-like protein, DlpA-like protein; complete cds; mcf
             pathogenicity island, complete sequence; tRNA-Phe gene,
             complete sequence; and TetR-family-like regulatory protein
             (tetR) gene, partial cds
          Length = 35876

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tttttgttgtggagaacaac 196
             ||||||||||||||||||||
Sbjct: 33289 tttttgttgtggagaacaac 33308
to top
>gb|AY855841.2| Enterococcus faecalis plasmid pCF10, complete sequence
          Length = 67673

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   cttccgattatttttgttgt 186
             ||||||||||||||||||||
Sbjct: 10001 cttccgattatttttgttgt 9982
to top
>gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    gggcaaggagaggtgaagga 361
              ||||||||||||||||||||
Sbjct: 141963 gggcaaggagaggtgaagga 141944
to top
>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence
          Length = 189479

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 302    gtcctgaaggtcagggaggtggct 325
              ||||||||| ||||||||||||||
Sbjct: 143140 gtcctgaagttcagggaggtggct 143163
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 119    aacaacggccagttctttgagtgcctgaacatggct 154
              |||||||||||||| |  |||||||| |||||||||
Sbjct: 311115 aacaacggccagttttacgagtgcctcaacatggct 311080
to top
>gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence
          Length = 202653

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 172    gattatttttgttgtggagaacaa 195
              ||||||||||||||| ||||||||
Sbjct: 138471 gattatttttgttgttgagaacaa 138494
to top
>gb|AC155322.5| Mus musculus 10 BAC RP24-149J3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 187016

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   gggcaaggagaggtgaagga 361
             ||||||||||||||||||||
Sbjct: 48502 gggcaaggagaggtgaagga 48483
to top
>ref|NM_072119.1| Caenorhabditis elegans ZC250.2 (ZC250.2) mRNA, complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gattatttttgttgtggaga 191
           ||||||||||||||||||||
Sbjct: 376 gattatttttgttgtggaga 395
to top
>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 302   gtcctgaaggtcagggaggtggct 325
             ||||||||| ||||||||||||||
Sbjct: 17570 gtcctgaagttcagggaggtggct 17593
to top
>gb|AC158634.5| Mus musculus 10 BAC RP23-424C16 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 169826

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   gggcaaggagaggtgaagga 361
             ||||||||||||||||||||
Sbjct: 54293 gggcaaggagaggtgaagga 54274
to top
>gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome 14, complete sequence
          Length = 236748

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    acatggctcagctgtggaag 166
              ||||||||||||||||||||
Sbjct: 186230 acatggctcagctgtggaag 186249
to top
>gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complete sequence
          Length = 57660

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  cttccgattatttttgttgt 186
            ||||||||||||||||||||
Sbjct: 7078 cttccgattatttttgttgt 7059
to top
>gb|AE016833.1| Enterococcus faecalis V583 plasmid pTEF1, complete sequence
          Length = 66320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   cttccgattatttttgttgt 186
             ||||||||||||||||||||
Sbjct: 42932 cttccgattatttttgttgt 42951
to top
>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    cttccgattatttttgttgt 186
              ||||||||||||||||||||
Sbjct: 143260 cttccgattatttttgttgt 143241
to top
>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence
          Length = 236806

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     ttgcattctttggggacggt 112
              ||||||||||||||||||||
Sbjct: 221089 ttgcattctttggggacggt 221108
to top
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     tggaagcttccgattatttt 180
               ||||||||||||||||||||
Sbjct: 2868887 tggaagcttccgattatttt 2868868


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,144,517
Number of Sequences: 3902068
Number of extensions: 3144517
Number of successful extensions: 60592
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60355
Number of HSP's gapped (non-prelim): 235
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top