ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PUR5_VIBCH (Q9KPY6) Phosphoribosylformylglycinamidine cyclo-liga... 28 8.7
2PUR5_PHOLL (Q7N3F7) Phosphoribosylformylglycinamidine cyclo-liga... 28 8.7

>PUR5_VIBCH (Q9KPY6) Phosphoribosylformylglycinamidine cyclo-ligase (EC|
           6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
           synthetase) (AIR synthase)
          Length = 346

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 78  DFDTSGN--DTVEEDEFVAGMKIWLHEAKSKVAASGAYSN 191
           D+D +G     VE++E + G K+ + +A   V +SG +SN
Sbjct: 154 DYDVAGFCVGVVEKEEIIDGSKVQVGDALIAVGSSGPHSN 193



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>PUR5_PHOLL (Q7N3F7) Phosphoribosylformylglycinamidine cyclo-ligase (EC|
           6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
           synthetase) (AIR synthase)
          Length = 346

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 78  DFDTSGN--DTVEEDEFVAGMKIWLHEAKSKVAASGAYSN 191
           D+D +G     VE+ E + G K+   +A   +AASG +SN
Sbjct: 153 DYDVAGFCVGVVEKSEIIDGSKVQAGDALIALAASGPHSN 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,881,745
Number of Sequences: 219361
Number of extensions: 276607
Number of successful extensions: 854
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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