ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39i17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLCF_MOUSE (Q8K2C8) 1-acyl-sn-glycerol-3-phosphate acyltransfera... 101 1e-21
2PLCF_PONPY (Q5R6J7) 1-acyl-sn-glycerol-3-phosphate acyltransfera... 100 4e-21
3PLCF_HUMAN (Q86UL3) 1-acyl-sn-glycerol-3-phosphate acyltransfera... 100 4e-21
4XERC_STRA5 (P67633) Tyrosine recombinase xerC 31 2.9
5XERC_STRA3 (P67632) Tyrosine recombinase xerC 31 2.9

>PLCF_MOUSE (Q8K2C8) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta|
           precursor (EC 2.3.1.51) (1-AGP acyltransferase 6)
           (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta)
           (LPAAT-zeta)
          Length = 456

 Score =  101 bits (252), Expect = 1e-21
 Identities = 45/108 (41%), Positives = 68/108 (62%)
 Frame = +2

Query: 5   VCPIAIKYNKIFVDAFWNSKKQSFTMHLVRLMTSWAVVCDVWFLEPQYLREGETAIEFTE 184
           V P+AIKY+  F DAFWNS K     +L+R+MTSWA+VC VW+L P    + E A++F  
Sbjct: 345 VYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREKDEDAVQFAN 404

Query: 185 RVRDMIAARAGLKKVPWDGYLKHNRPSPKHTEEKQRMFAESVLRRLEE 328
           RV+  IA + GL  + WDG LK  +      EE+Q+++++ ++   E+
Sbjct: 405 RVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIVGNHED 452



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>PLCF_PONPY (Q5R6J7) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta|
           precursor (EC 2.3.1.51) (1-AGP acyltransferase 6)
           (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta)
           (LPAAT-zeta)
          Length = 456

 Score =  100 bits (248), Expect = 4e-21
 Identities = 44/103 (42%), Positives = 65/103 (63%)
 Frame = +2

Query: 5   VCPIAIKYNKIFVDAFWNSKKQSFTMHLVRLMTSWAVVCDVWFLEPQYLREGETAIEFTE 184
           V P+AIKY+  F DAFWNS K     +L+R+MTSWA+VC VW+L P      E A++F  
Sbjct: 345 VYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREADEDAVQFAN 404

Query: 185 RVRDMIAARAGLKKVPWDGYLKHNRPSPKHTEEKQRMFAESVL 313
           RV+  IA + GL  + WDG LK  +      EE+Q+++++ ++
Sbjct: 405 RVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIV 447



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>PLCF_HUMAN (Q86UL3) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta|
           precursor (EC 2.3.1.51) (1-AGP acyltransferase 6)
           (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta)
           (LPAAT-zeta)
          Length = 456

 Score =  100 bits (248), Expect = 4e-21
 Identities = 44/103 (42%), Positives = 65/103 (63%)
 Frame = +2

Query: 5   VCPIAIKYNKIFVDAFWNSKKQSFTMHLVRLMTSWAVVCDVWFLEPQYLREGETAIEFTE 184
           V P+AIKY+  F DAFWNS K     +L+R+MTSWA+VC VW+L P      E A++F  
Sbjct: 345 VYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREADEDAVQFAN 404

Query: 185 RVRDMIAARAGLKKVPWDGYLKHNRPSPKHTEEKQRMFAESVL 313
           RV+  IA + GL  + WDG LK  +      EE+Q+++++ ++
Sbjct: 405 RVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIV 447



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>XERC_STRA5 (P67633) Tyrosine recombinase xerC|
          Length = 356

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -2

Query: 238 IPWNLLKTSPSSYHVPHSFSKFYRCLPFPEILRFQEPNITNNSPRCHKTNQMHCKRLLLT 59
           +PW +L+   S   VP+SF+  Y  L   E  RF E  + +    CH     H   + L+
Sbjct: 17  MPWYVLEYYQSKLSVPYSFTTLYEYL--KEYRRFLEWLLDSGVANCH-----HIAEIELS 69

Query: 58  IPEGVNK 38
           + E + K
Sbjct: 70  VLENLTK 76



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>XERC_STRA3 (P67632) Tyrosine recombinase xerC|
          Length = 356

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -2

Query: 238 IPWNLLKTSPSSYHVPHSFSKFYRCLPFPEILRFQEPNITNNSPRCHKTNQMHCKRLLLT 59
           +PW +L+   S   VP+SF+  Y  L   E  RF E  + +    CH     H   + L+
Sbjct: 17  MPWYVLEYYQSKLSVPYSFTTLYEYL--KEYRRFLEWLLDSGVANCH-----HIAEIELS 69

Query: 58  IPEGVNK 38
           + E + K
Sbjct: 70  VLENLTK 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,837,566
Number of Sequences: 219361
Number of extensions: 1629457
Number of successful extensions: 3968
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3967
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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