ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags39i09 |
|---|---|
| Clone Library Name | barley_pub |
>TPP2_HUMAN (P29144) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1248 Score = 100 bits (250), Expect = 2e-21 Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 3/188 (1%) Frame = +2 Query: 8 IYDNKFESQFYRISDSNKCVYSSGDVYPSY--VKLPKGEYTLQLYIRHENVQILEKLKQL 181 +Y+++F+SQ + I D NK SGD YP +KL KG+YT++L IRHE + LE+LK L Sbjct: 846 LYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDLERLKDL 905 Query: 182 VLFIERKLEKKDFIQLSFYSEPDGPIIGNATFKSSVLVPGEPEAFYVGPPSREKLPKGAI 361 + +L + + L + ++G + L P + F+V +K+PKGA Sbjct: 906 PFIVSHRL--SNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIPKGAG 963 Query: 362 PGSVLVGSITYGIVSSFNKRDEQHAPASYSILCIIPPPSKV-DDTKEKGVSVETKKSISE 538 PG L GS+T K D P Y +IPPP+K + +K+K E +K + E Sbjct: 964 PGCYLAGSLTLSKTELGKKADV--IPVHY---YLIPPPTKTKNGSKDKEKDSEKEKDLKE 1018 Query: 539 RLNDEVRD 562 + +RD Sbjct: 1019 EFTEALRD 1026
>TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1248 Score = 100 bits (249), Expect = 3e-21 Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 3/188 (1%) Frame = +2 Query: 8 IYDNKFESQFYRISDSNKCVYSSGDVYPSY--VKLPKGEYTLQLYIRHENVQILEKLKQL 181 +Y+++F+SQ + I D NK SGD YP +KL KG+YT++L IRHE + L++LK L Sbjct: 846 LYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDLDRLKDL 905 Query: 182 VLFIERKLEKKDFIQLSFYSEPDGPIIGNATFKSSVLVPGEPEAFYVGPPSREKLPKGAI 361 + +L + + L + ++G S L P + F+V +K+PKGA Sbjct: 906 PFIVSHRL--SNTLSLDIHENHSLALLGKKKSSSLTLPPKYNQPFFVTSLPDDKIPKGAG 963 Query: 362 PGSVLVGSITYGIVSSFNKRDEQHAPASYSILCIIPPPSKV-DDTKEKGVSVETKKSISE 538 PG L GS+T K D P Y +IPPP+K + +K+K E +K + E Sbjct: 964 PGCYLAGSLTLSKTELGKKADV--IPVHY---YLIPPPTKTKNGSKDKEKDSEKEKDLKE 1018 Query: 539 RLNDEVRD 562 + +RD Sbjct: 1019 EFTEALRD 1026
>TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1261 Score = 98.2 bits (243), Expect = 1e-20 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 14/199 (7%) Frame = +2 Query: 8 IYDNKFESQFYRISDSNKCVYSSGDVYPSY--VKLPKGEYTLQLYIRHENVQILEKLKQL 181 +Y+++F+SQ + I D NK SGD YP +KL KG+YT++L IRHE + L++LK L Sbjct: 846 LYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDLDRLKDL 905 Query: 182 VLFIERKLEKKDFIQLSFYSEPDGPIIGNATFKSSVLVPGEPEAFYVGPPSREKLPKGAI 361 + +L + + L + ++G S L P + F+V +K+PKGA Sbjct: 906 PFIVSHRL--SNTLSLDIHENHSLALLGKKKSSSLTLPPKYNQPFFVTSLPDDKIPKGAG 963 Query: 362 PGSVLVGSITYGIVSSFNKRDEQHA-----------PASYSILCIIPPPSKV-DDTKEKG 505 PG L GS+T K + A P Y +IPPP+K+ + +K+K Sbjct: 964 PGCYLAGSLTLSKTELGKKAGQSAAKRQGKFKKDVIPVHY---YLIPPPTKIKNGSKDKE 1020 Query: 506 VSVETKKSISERLNDEVRD 562 E +K + E + +RD Sbjct: 1021 KDSEKEKDLKEEFTEALRD 1039
>TPP2_DROME (Q9V6K1) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) (dTPP II) Length = 1441 Score = 74.3 bits (181), Expect = 2e-13 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%) Frame = +2 Query: 8 IYDNKFESQFYRISDSNKCVYSSGDVYP--SYVKLPKGEYTLQLYIRHENVQILEKLKQL 181 +Y+ +FESQ + + D+NK + ++GD + S+ KL KGEYT++L +RHE +LEK+ + Sbjct: 962 LYEAEFESQMWMLFDANKALVATGDAHSHTSFTKLDKGEYTIRLQVRHEKRDLLEKISEA 1021 Query: 182 VLFIERKLEKKDFIQLSFYSEPDGPIIGNATFKSSVLVPGEPEAFYVGPPSREKLPKGAI 361 L KL + L FY + I+G + SS L Y+ P ++E+L K + Sbjct: 1022 NLVASFKLTSP--LTLDFYENYNQCIVGGRKYVSSPL-RLSTRVLYIAPITQERLTKANL 1078 Query: 362 PGSV--LVGSITYGIVSSFNKRDEQHAPASYSILCIIPPPSKVDDT 493 P L G++ + +R QH P +Y I+ P K T Sbjct: 1079 PAQCAWLSGNLVFP-QDEVGRRVAQH-PFTY----ILNPAEKKSHT 1118
>YQS6_CAEEL (Q09541) Hypothetical subtilase-type proteinase F21H12.6 in| chromosome II (EC 3.4.21.-) Length = 1374 Score = 66.2 bits (160), Expect = 6e-11 Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 5/190 (2%) Frame = +2 Query: 8 IYDNKFESQFYRISDSNKCVYSSGDVYPSY--VKLPKGEYTLQLYIRHENVQILEKLKQL 181 +Y++ + ++I +NK + YP KL KG+YT+Q IR+ + Q+L+ +K+L Sbjct: 903 LYESPVDCVLFQIFGANKSFVGASSSYPDRWTQKLEKGDYTIQAQIRYPDDQVLQGMKEL 962 Query: 182 VLFIERKLEKKDFIQLSFYSEPDGPIIGNATFKSSVLVPGEPEAFYVGPPSREKLPKGAI 361 L + KL K + L+ S D + F L+P + Y + +KLPK + Sbjct: 963 PLLVHVKLGNKISVDLA-ASASDATLGKECKFAGKALLPNQEMTVYAMNIADDKLPKTIV 1021 Query: 362 PGSVLVGSITYGIVSSFNKRDEQHAPASYSILCIIPPPSKVDDTKEKGVSVETKK---SI 532 P S GS G S+ D S I + S+ KG+S+ T K + Sbjct: 1022 PTS---GSFLAGTFSALKDSDLSDVDKSEVIYFL----SEYSTRPTKGLSMVTTKKDTNQ 1074 Query: 533 SERLNDEVRD 562 ++ + D +RD Sbjct: 1075 NQEMTDAIRD 1084
>UUP_BUCAP (Q8K9I3) ABC transporter ATP-binding protein uup| Length = 592 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/69 (27%), Positives = 36/69 (52%) Frame = +2 Query: 86 YPSYVKLPKGEYTLQLYIRHENVQILEKLKQLVLFIERKLEKKDFIQLSFYSEPDGPIIG 265 Y +Y K+ + I++ + +I+ KLK + FIE+K + F + Y + G I Sbjct: 263 YKNYKKIENFNNVIINEIKNYSGKIIFKLKNISFFIEKKTIIQSFSSIIQYGDKIGLIGN 322 Query: 266 NATFKSSVL 292 N + KS+++ Sbjct: 323 NGSGKSTMI 331
>NALP7_HUMAN (Q8WX94) NACHT-, LRR- and PYD-containing protein 7| (PYRIN-containing APAF1-like protein 3) Length = 980 Score = 30.0 bits (66), Expect = 4.7 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = +2 Query: 134 YIRHENVQILEKLKQLVLFIERKLEKKDFIQLSFYSEPDGPIIGNATFKSSVLVPGEPEA 313 +IR+ V ILE++ L K+ K + ++ E D P +G+A S + PGE E Sbjct: 66 WIRNATVNILEEMNLTELC---KMAKAEMMEDGQVQEIDNPELGDAEEDSELAKPGEKEG 122 Query: 314 F 316 + Sbjct: 123 W 123
>DPO4_LEPIN (Q8F8Q2) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 364 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 6/33 (18%) Frame = +2 Query: 158 ILEKLKQLVLFIERKLEKKDF------IQLSFY 238 +L++LK + + +ER+LEKKDF +++ FY Sbjct: 263 LLKQLKDVAVVVERRLEKKDFAGKTLTLKIKFY 295
>DPO4_LEPIC (Q72MY7) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 364 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 6/33 (18%) Frame = +2 Query: 158 ILEKLKQLVLFIERKLEKKDF------IQLSFY 238 +L++LK + + +ER+LEKKDF +++ FY Sbjct: 263 LLKQLKDVAVVVERRLEKKDFAGKTLTLKIKFY 295
>Y1798_CLOAB (Q97I55) UPF0090 protein CAC1798| Length = 149 Score = 29.6 bits (65), Expect = 6.1 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +2 Query: 113 GEYTLQLYIRHENVQILEKLKQLVLFIERKLEKKDFIQLSFYSEPDGPIIGNATF 277 GE L++YI EN L+ +++ I L++KD I S+Y E P I F Sbjct: 30 GERYLRVYIDKENGISLDDCEKVSRAISDLLDEKDPIPYSYYLEVSSPGIYRTLF 84
>CR9DA_BACTP (O06014) Pesticidal crystal protein cry9Da (Insecticidal| delta-endotoxin CryIXD(a)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1169 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -1 Query: 343 FFSRWWTHIECFRFSGN*NRGLKGGISNYRTVRF 242 F +R T I FRF+ NRG + +YRTV F Sbjct: 598 FVTRGGTTINNFRFTRTMNRGQESRYESYRTVEF 631
>ACTZ_PNECA (P42023) Actin-2 (Actin II) (Centractin-like protein)| Length = 385 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +2 Query: 263 GNATFKSSVLVPGEPEAF---YVGPPSREKLPKGAIPGSVLVGS 385 G+ K+ +P++F YVG P K+ GAI G + +G+ Sbjct: 17 GSGVIKAGFAGEDQPKSFFPSYVGRPKHLKIMAGAIEGDIFIGN 60
>SEC16_YEAST (P48415) Multidomain vesicle coat protein| Length = 2195 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 7/54 (12%) Frame = +2 Query: 224 QLSFYSEPDGPIIGNATF----KSSVLVPGEPEA---FYVGPPSREKLPKGAIP 364 Q+ + S+P GP+ GN+++ +SS VP P+A + P + + P G +P Sbjct: 865 QVPYTSQPVGPVAGNSSYQSQTRSSYAVPMMPQAQTSASIQPHANIQPPTGILP 918 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,670,761 Number of Sequences: 219361 Number of extensions: 1640781 Number of successful extensions: 4136 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4024 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4123 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
