ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39i09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 464 e-127
2dbj|AK066478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
3dbj|AK103515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
6gb|AC114820.4| Mus musculus BAC clone RP23-70M6 from 18, complet... 46 0.12
7gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome... 46 0.12
8emb|AL109913.20|HSA183K14 Human DNA sequence from clone RP11-183... 44 0.49
9emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chr... 44 0.49
10emb|CT574570.2| Pan troglodytes chromosome X clone CH251-19I14 m... 44 0.49
11emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chro... 44 0.49
12ref|XM_605199.2| PREDICTED: Bos taurus hypothetical LOC526823 (L... 42 1.9
13gb|AC136471.1| Solanum demissum chromosome 11 BAC PGEC561 genomi... 42 1.9
14emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on ch... 42 1.9
15gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell... 42 1.9
16gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, c... 42 1.9
17gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, c... 42 1.9
18gb|AE003542.3| Drosophila melanogaster chromosome 3L, section 43... 42 1.9
19ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransferase/ s... 40 7.7
20gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
21ref|XM_604876.2| PREDICTED: Bos taurus similar to ankyrin repeat... 40 7.7
22gb|AC157897.2| Mus musculus chromosome 15, clone RP23-442E13, co... 40 7.7
23gb|AC120120.2| Homo sapiens chromosome 5 clone RP11-458K15, comp... 40 7.7
24gb|AC123922.3| Mus musculus BAC clone RP24-198D1 from chromosome... 40 7.7
25gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complet... 40 7.7
26gb|AC122198.2| Mus musculus BAC clone RP23-56F12 from 1, complet... 40 7.7
27gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.7
28gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, comple... 40 7.7
29emb|AL512288.19| Human DNA sequence from clone RP11-460I13 on ch... 40 7.7
30emb|AL390242.17| Human DNA sequence from clone RP11-31F15 on chr... 40 7.7
31emb|AL391117.8| Human DNA sequence from clone RP11-103B9 on chro... 40 7.7
32emb|AL157895.8| Human DNA sequence from clone RP11-354E11 on chr... 40 7.7
33emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on ch... 40 7.7
34gb|AY142511.1| Arabidopsis thaliana putative sucrose synthetase ... 40 7.7
35gb|AY051001.1| Arabidopsis thaliana putative sucrose synthetase ... 40 7.7
36emb|AL929272.10| Mouse DNA sequence from clone RP23-69H10 on chr... 40 7.7
37emb|AL831922.1|HSM803257 Homo sapiens mRNA; cDNA DKFZp761P0818 (... 40 7.7
38emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c... 40 7.7
39emb|BX677665.17| Zebrafish DNA sequence from clone DKEY-25M3 in ... 40 7.7
40emb|AL663039.18| Mouse DNA sequence from clone RP23-50H23 on chr... 40 7.7
41gb|AC068302.18| Homo sapiens 3 BAC RP11-432D10 (Roswell Park Can... 40 7.7
42gb|AE010178.1| Pyrococcus furiosus DSM 3638, section 53 of 173 o... 40 7.7
43ref|XR_001271.1| PREDICTED: Homo sapiens similar to hypothetical... 40 7.7
44ref|XM_935664.1| PREDICTED: Homo sapiens similar to ubiquitin co... 40 7.7
45ref|XM_928683.1| PREDICTED: Homo sapiens similar to ubiquitin co... 40 7.7
46gb|AC115811.12| Mus musculus chromosome 5, clone RP23-429M21, co... 40 7.7
47gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, compl... 40 7.7
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
49emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cDNA Co... 40 7.7
50gb|AC013246.13|AC013246 Homo sapiens 12 BAC RP11-997P16 (Roswell... 40 7.7
51gb|AC073834.6| Homo sapiens BAC clone RP11-250N10 from 2, comple... 40 7.7
52gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3 40 7.7
53gb|AC121306.12| Mus musculus chromosome 3, clone RP24-100C12, co... 40 7.7
54emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 7.7
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
56gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosom... 40 7.7
57emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from B... 40 7.7
58dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.7 
>dbj|AK067099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M07, full
            insert sequence
          Length = 4515

 Score =  464 bits (234), Expect = e-127
 Identities = 442/511 (86%), Gaps = 9/511 (1%)
 Strand = Plus / Plus

                                                                        
Query: 7    aatatacgataataagtttgagtctcagttctatagaatttcagattcaaataagtgtgt 66
            |||||| ||||| ||||| ||||||||||  |||||||| ||||||||||| ||||||||
Sbjct: 3113 aatatatgataacaagttcgagtctcagtattatagaatatcagattcaaacaagtgtgt 3172

                                                                        
Query: 67   ttactcttctggtgatgtctatcctagttatgtgaaacttccaaaaggtgaatacacact 126
             |||||||||||||| |||||||||| |||||| |||||  |||||||||||||||| ||
Sbjct: 3173 ctactcttctggtgacgtctatcctaattatgtcaaactctcaaaaggtgaatacacgct 3232

                                                                        
Query: 127  gcaattgtacataaggcatgaaaatgtgcaaatcttggagaagctgaagcaattggttct 186
            ||||||||||||||||||||| ||||||||  | |||||||| |||||||| ||||||||
Sbjct: 3233 gcaattgtacataaggcatgacaatgtgcagttattggagaaactgaagcagttggttct 3292

                                                                        
Query: 187  atttattgagagaaaactagagaagaaggatttcattcaattaagtttctactctgaacc 246
            |||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 3293 atttatcgagaggaagctagagaaaaaggatttcattcaattgagtttctactctgaacc 3352

                                                                        
Query: 247  tgacggtcctataattggaaatgccacctttaagtcctctgttttagttcccggagaacc 306
            ||| || |||| | ||||||||| |||||| || |||||| |||||||||| ||||||||
Sbjct: 3353 tgatggccctacagttggaaatggcaccttcaaatcctctattttagttccaggagaacc 3412

                                                                        
Query: 307  tgaagcattctatgtgggtccaccatctagagaaaaacttccaaagggtgccatacctgg 366
             |||||||||||||||||||||||||||||||||||||||||||||  ||   |||||||
Sbjct: 3413 agaagcattctatgtgggtccaccatctagagaaaaacttccaaagaatgttctacctgg 3472

                                                                        
Query: 367  gtctgttttagttggctccataacctatggtatagtaagctcattcaacaagagagatg- 425
            ||||||||| ||||| || || |||||||||   |||||||| |||| ||||| ||||| 
Sbjct: 3473 gtctgttttggttgggtcaattacctatggtgcggtaagctctttcagcaagaaagatga 3532

                                                                        
Query: 426  -----aacagcatgctccagcatcttatagcattttgtgtatcattccaccaccatcaaa 480
                 | ||||||||||||||||||||||| || | || | |||||   |||||||||||
Sbjct: 3533 ccaaaaccagcatgctccagcatcttatagtatctcgtatctcatt---ccaccatcaaa 3589

                                           
Query: 481  ggttgatgatactaaagaaaagggggtttca 511
            ||||||| ||  |||||||||||| ||||||
Sbjct: 3590 ggttgataatgataaagaaaagggagtttca 3620
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>dbj|AK066478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069C16, full
            insert sequence
          Length = 3206

 Score =  446 bits (225), Expect = e-122
 Identities = 410/472 (86%), Gaps = 6/472 (1%)
 Strand = Plus / Plus

                                                                        
Query: 7    aatatacgataataagtttgagtctcagttctatagaatttcagattcaaataagtgtgt 66
            |||||| ||||| ||||| ||||||||||  |||||||| ||||||||||| ||||||||
Sbjct: 1568 aatatatgataacaagttcgagtctcagtattatagaatatcagattcaaacaagtgtgt 1627

                                                                        
Query: 67   ttactcttctggtgatgtctatcctagttatgtgaaacttccaaaaggtgaatacacact 126
             |||||||||||||| |||||||||| |||||| |||||  |||||||||||||||| ||
Sbjct: 1628 ctactcttctggtgacgtctatcctaattatgtcaaactctcaaaaggtgaatacacgct 1687

                                                                        
Query: 127  gcaattgtacataaggcatgaaaatgtgcaaatcttggagaagctgaagcaattggttct 186
            ||||||||||||||||||||| ||||||||  | |||||||| |||||||| ||||||||
Sbjct: 1688 gcaattgtacataaggcatgacaatgtgcagttattggagaaactgaagcagttggttct 1747

                                                                        
Query: 187  atttattgagagaaaactagagaagaaggatttcattcaattaagtttctactctgaacc 246
            |||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 1748 atttatcgagaggaagctagagaaaaaggatttcattcaattgagtttctactctgaacc 1807

                                                                        
Query: 247  tgacggtcctataattggaaatgccacctttaagtcctctgttttagttcccggagaacc 306
            ||| || |||| | ||||||||| |||||| || |||||| |||||||||| ||||||||
Sbjct: 1808 tgatggccctacagttggaaatggcaccttcaaatcctctattttagttccaggagaacc 1867

                                                                        
Query: 307  tgaagcattctatgtgggtccaccatctagagaaaaacttccaaagggtgccatacctgg 366
             |||||||||||||||||||||||||||||||||||||||||||||  ||   |||||||
Sbjct: 1868 agaagcattctatgtgggtccaccatctagagaaaaacttccaaagaatgttctacctgg 1927

                                                                        
Query: 367  gtctgttttagttggctccataacctatggtatagtaagctcattcaacaagagagatg- 425
            ||||||||| ||||| || || |||||||||   |||||||| |||| ||||| ||||| 
Sbjct: 1928 gtctgttttggttgggtcaattacctatggtgcggtaagctctttcagcaagaaagatga 1987

                                                                
Query: 426  -----aacagcatgctccagcatcttatagcattttgtgtatcattccacca 472
                 | ||||||||||||||||||||||| || | || | |||||||||||
Sbjct: 1988 ccaaaaccagcatgctccagcatcttatagtatctcgtatctcattccacca 2039
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>dbj|AK103515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131G16, full
            insert sequence
          Length = 3263

 Score =  434 bits (219), Expect = e-118
 Identities = 369/419 (88%)
 Strand = Plus / Plus

                                                                        
Query: 7    aatatacgataataagtttgagtctcagttctatagaatttcagattcaaataagtgtgt 66
            |||||| ||||| ||||| ||||||||||  |||||||| ||||||||||| ||||||||
Sbjct: 2845 aatatatgataacaagttcgagtctcagtattatagaatatcagattcaaacaagtgtgt 2904

                                                                        
Query: 67   ttactcttctggtgatgtctatcctagttatgtgaaacttccaaaaggtgaatacacact 126
             |||||||||||||| |||||||||| |||||| |||||  |||||||||||||||| ||
Sbjct: 2905 ctactcttctggtgacgtctatcctaattatgtcaaactctcaaaaggtgaatacacgct 2964

                                                                        
Query: 127  gcaattgtacataaggcatgaaaatgtgcaaatcttggagaagctgaagcaattggttct 186
            ||||||||||||||||||||| ||||||||  | |||||||| |||||||| ||||||||
Sbjct: 2965 gcaattgtacataaggcatgacaatgtgcagttattggagaaactgaagcagttggttct 3024

                                                                        
Query: 187  atttattgagagaaaactagagaagaaggatttcattcaattaagtttctactctgaacc 246
            |||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 3025 atttatcgagaggaagctagagaaaaaggatttcattcaattgagtttctactctgaacc 3084

                                                                        
Query: 247  tgacggtcctataattggaaatgccacctttaagtcctctgttttagttcccggagaacc 306
            ||| || |||| | ||||||||| |||||| || |||||| |||||||||| ||||||||
Sbjct: 3085 tgatggccctacagttggaaatggcaccttcaaatcctctattttagttccaggagaacc 3144

                                                                        
Query: 307  tgaagcattctatgtgggtccaccatctagagaaaaacttccaaagggtgccatacctgg 366
             |||||||||||||||||||||||||||||||||||||||||||||  ||   |||||||
Sbjct: 3145 agaagcattctatgtgggtccaccatctagagaaaaacttccaaagaatgttctacctgg 3204

                                                                       
Query: 367  gtctgttttagttggctccataacctatggtatagtaagctcattcaacaagagagatg 425
            ||||||||| ||||| || || |||||||||   |||||||| |||| ||||| |||||
Sbjct: 3205 gtctgttttggttgggtcaattacctatggtgcggtaagctctttcagcaagaaagatg 3263
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                            
Query: 60       agtgtgtttactcttctggtgatgtctatcctagttatgtgaaacttccaaaaggtgaat 119
                ||||||| |||||||||||||| |||||||||| |||||| |||||  ||||||||||||
Sbjct: 26981737 agtgtgtctactcttctggtgacgtctatcctaattatgtcaaactctcaaaaggtgaat 26981796

                                       
Query: 120      acacactgcaattgtacataagg 142
                |||| ||||||||||||||||||
Sbjct: 26981797 acacgctgcaattgtacataagg 26981819



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                      
Query: 300      gagaacctgaagcattctatgtgggtccaccatctagagaaaaacttccaaagg 353
                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26984024 gagaaccagaagcattctatgtgggtccaccatctagagaaaaacttccaaagg 26984077



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                            
Query: 213      aggatttcattcaattaagtttctactctgaacctgacggtcctataattggaaatgcca 272
                |||||||||||||||| |||||||||||||||||||| || |||| | ||||||||| ||
Sbjct: 26983863 aggatttcattcaattgagtttctactctgaacctgatggccctacagttggaaatggca 26983922

                                         
Query: 273      cctttaagtcctctgttttagttcc 297
                |||| || |||||| ||||||||||
Sbjct: 26983923 ccttcaaatcctctattttagttcc 26983947



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 140      aggcatgaaaatgtgcaaatcttggagaagctgaagcaattggttctatttattgagaga 199
                |||||||| ||||||||  | |||||||| |||||||| |||||||||||||| ||||| 
Sbjct: 26983228 aggcatgacaatgtgcagttattggagaaactgaagcagttggttctatttatcgagagg 26983287

                                
Query: 200      aaactagagaagaagg 215
                || |||||||| ||||
Sbjct: 26983288 aagctagagaaaaagg 26983303



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 97/119 (81%), Gaps = 6/119 (5%)
 Strand = Plus / Plus

                                                                            
Query: 360      tacctgggtctgttttagttggctccataacctatggtatagtaagctcattcaacaaga 419
                |||||||||||||||| ||||| || || |||||||||   |||||||| |||| |||||
Sbjct: 26984228 tacctgggtctgttttggttgggtcaattacctatggtgcggtaagctctttcagcaaga 26984287

                                                                           
Query: 420      gagatg------aacagcatgctccagcatcttatagcattttgtgtatcattccacca 472
                 |||||      | ||||||||||||||||||||||| || | || | |||||||||||
Sbjct: 26984288 aagatgaccaaaaccagcatgctccagcatcttatagtatctcgtatctcattccacca 26984346



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 7        aatatacgataataagtttgagtctcagttctatagaatttcagattcaaa 57
                |||||| ||||| ||||| ||||||||||  |||||||| |||||||||||
Sbjct: 26981005 aatatatgataacaagttcgagtctcagtattatagaatatcagattcaaa 26981055
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461B08
          Length = 153743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                         
Query: 60    agtgtgtttactcttctggtgatgtctatcctagttatgtgaaacttccaaaaggtgaat 119
             ||||||| |||||||||||||| |||||||||| |||||| |||||  ||||||||||||
Sbjct: 34939 agtgtgtctactcttctggtgacgtctatcctaattatgtcaaactctcaaaaggtgaat 34998

                                    
Query: 120   acacactgcaattgtacataagg 142
             |||| ||||||||||||||||||
Sbjct: 34999 acacgctgcaattgtacataagg 35021



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                   
Query: 300   gagaacctgaagcattctatgtgggtccaccatctagagaaaaacttccaaagg 353
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37226 gagaaccagaagcattctatgtgggtccaccatctagagaaaaacttccaaagg 37279



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 213   aggatttcattcaattaagtttctactctgaacctgacggtcctataattggaaatgcca 272
             |||||||||||||||| |||||||||||||||||||| || |||| | ||||||||| ||
Sbjct: 37065 aggatttcattcaattgagtttctactctgaacctgatggccctacagttggaaatggca 37124

                                      
Query: 273   cctttaagtcctctgttttagttcc 297
             |||| || |||||| ||||||||||
Sbjct: 37125 ccttcaaatcctctattttagttcc 37149



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 140   aggcatgaaaatgtgcaaatcttggagaagctgaagcaattggttctatttattgagaga 199
             |||||||| ||||||||  | |||||||| |||||||| |||||||||||||| ||||| 
Sbjct: 36430 aggcatgacaatgtgcagttattggagaaactgaagcagttggttctatttatcgagagg 36489

                             
Query: 200   aaactagagaagaagg 215
             || |||||||| ||||
Sbjct: 36490 aagctagagaaaaagg 36505



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 97/119 (81%), Gaps = 6/119 (5%)
 Strand = Plus / Plus

                                                                         
Query: 360   tacctgggtctgttttagttggctccataacctatggtatagtaagctcattcaacaaga 419
             |||||||||||||||| ||||| || || |||||||||   |||||||| |||| |||||
Sbjct: 37430 tacctgggtctgttttggttgggtcaattacctatggtgcggtaagctctttcagcaaga 37489

                                                                        
Query: 420   gagatg------aacagcatgctccagcatcttatagcattttgtgtatcattccacca 472
              |||||      | ||||||||||||||||||||||| || | || | |||||||||||
Sbjct: 37490 aagatgaccaaaaccagcatgctccagcatcttatagtatctcgtatctcattccacca 37548



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 7     aatatacgataataagtttgagtctcagttctatagaatttcagattcaaa 57
             |||||| ||||| ||||| ||||||||||  |||||||| |||||||||||
Sbjct: 34207 aatatatgataacaagttcgagtctcagtattatagaatatcagattcaaa 34257
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>gb|AC114820.4| Mus musculus BAC clone RP23-70M6 from 18, complete sequence
          Length = 174470

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 422    gatgaacagcatgctccagcatcttat 448
              |||||| ||||||||||||||||||||
Sbjct: 171958 gatgaaaagcatgctccagcatcttat 171984
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>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete
            sequence
          Length = 167532

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 422  gatgaacagcatgctccagcatcttat 448
            |||||| ||||||||||||||||||||
Sbjct: 1925 gatgaaaagcatgctccagcatcttat 1951
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>emb|AL109913.20|HSA183K14 Human DNA sequence from clone RP11-183K14 on chromosome Xq26.3-27.3
              Contains an ADP-ribosylation factor-like 5 (ARL5)
              pseudogene and an  ELL gene (11-19 lysine-rich leukemia
              gene) (ELL) pseudogene, complete sequence
          Length = 144134

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 54     caaataagtgtgtttactcttctggt 79
              |||||||||||||||| |||||||||
Sbjct: 101792 caaataagtgtgtttattcttctggt 101767
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>emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chromosome 2, complete
            sequence
          Length = 241914

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 157  aatcttggagaagctgaagcaa 178
            ||||||||||||||||||||||
Sbjct: 2168 aatcttggagaagctgaagcaa 2147
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>emb|CT574570.2| Pan troglodytes chromosome X clone CH251-19I14 map Xq28, complete
              sequence
          Length = 173906

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 54     caaataagtgtgtttactcttctggt 79
              |||||||||||||||| |||||||||
Sbjct: 137762 caaataagtgtgtttattcttctggt 137737
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>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete
              sequence
          Length = 224188

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 177    aattggttctatttattgagag 198
              ||||||||||||||||||||||
Sbjct: 152503 aattggttctatttattgagag 152482
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>ref|XM_605199.2| PREDICTED: Bos taurus hypothetical LOC526823 (LOC526823), partial
           mRNA
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 483 ttgatgatactaaagaaaagg 503
           |||||||||||||||||||||
Sbjct: 593 ttgatgatactaaagaaaagg 613
to top
>gb|AC136471.1| Solanum demissum chromosome 11 BAC PGEC561 genomic sequence, complete
             sequence
          Length = 123428

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 482   gttgatgatactaaagaaaag 502
             |||||||||||||||||||||
Sbjct: 34280 gttgatgatactaaagaaaag 34300
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>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete
              sequence
          Length = 167058

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 496    agaaaagggggtttcagttga 516
              |||||||||||||||||||||
Sbjct: 150932 agaaaagggggtttcagttga 150952
to top
>gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 178394

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 133   gtacataaggcatgaaaatgtgcaa 157
             |||||||| ||||||||||||||||
Sbjct: 64713 gtacataaagcatgaaaatgtgcaa 64737
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>gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, complete sequence
          Length = 110907

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 330   catctagagaaaaacttccaaaggg 354
             ||||||||||||||||| |||||||
Sbjct: 38290 catctagagaaaaacttacaaaggg 38314
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>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence
          Length = 183794

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 330    catctagagaaaaacttccaaaggg 354
              ||||||||||||||||| |||||||
Sbjct: 139282 catctagagaaaaacttacaaaggg 139306
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>gb|AE003542.3| Drosophila melanogaster chromosome 3L, section 43 of 83 of the complete
              sequence
          Length = 303022

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 133    gtacataaggcatgaaaatgtgcaa 157
              |||||||| ||||||||||||||||
Sbjct: 243871 gtacataaagcatgaaaatgtgcaa 243895
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>ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
           transferase, transferring glycosyl groups AT4G02280
           mRNA, complete cds
          Length = 2913

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 514 tgaaacaaagaagagtatctctga 537
           |||||||||||||||| |||||||
Sbjct: 413 tgaaacaaagaagagtctctctga 436
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>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0058P12, complete sequence
          Length = 173073

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   tctatgtgggtccaccatct 334
             ||||||||||||||||||||
Sbjct: 85992 tctatgtgggtccaccatct 86011
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>ref|XM_604876.2| PREDICTED: Bos taurus similar to ankyrin repeat domain 26
           (LOC526505), partial mRNA
          Length = 4001

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 513 ttgaaacaaagaagagtatctctgagag 540
           ||||||| ||| ||||||||||||||||
Sbjct: 594 ttgaaaccaagcagagtatctctgagag 621
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>gb|AC157897.2| Mus musculus chromosome 15, clone RP23-442E13, complete sequence
          Length = 186421

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    gagaagaaggatttcattca 225
              ||||||||||||||||||||
Sbjct: 145498 gagaagaaggatttcattca 145479
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>gb|AC120120.2| Homo sapiens chromosome 5 clone RP11-458K15, complete sequence
          Length = 126549

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   gttgatgatactaaagaaaa 501
             ||||||||||||||||||||
Sbjct: 74523 gttgatgatactaaagaaaa 74542
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>gb|AC123922.3| Mus musculus BAC clone RP24-198D1 from chromosome 1, complete sequence
          Length = 163727

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     aatttcagattcaaataagt 62
              ||||||||||||||||||||
Sbjct: 103947 aatttcagattcaaataagt 103928
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>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence
          Length = 205216

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    tttaagtcctctgttttagt 294
              ||||||||||||||||||||
Sbjct: 200098 tttaagtcctctgttttagt 200079
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>gb|AC122198.2| Mus musculus BAC clone RP23-56F12 from 1, complete sequence
          Length = 180386

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   aatttcagattcaaataagt 62
            ||||||||||||||||||||
Sbjct: 5325 aatttcagattcaaataagt 5306
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>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete
             sequence
          Length = 200910

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaggtgaatacacactgcaa 130
             ||||||||||||||||||||
Sbjct: 83978 aaggtgaatacacactgcaa 83997
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>gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, complete sequence
          Length = 176398

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 532   ctctgagaggttaaatgatgaggt 555
             |||||||||||||| |||||||||
Sbjct: 71405 ctctgagaggttaagtgatgaggt 71428
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>emb|AL512288.19| Human DNA sequence from clone RP11-460I13 on chromosome 1 Contains the
             gene for acid sphingomyelinase-like phosphodiesterase
             (ASML3B), the gene for a novel protein (FLJ10307), two
             novel genes, the 3' end of the EYA3 gene for eyes absent
             homolog 3 (Drosophila) and an interferon-induced
             transmembrane protein pseudogene, complete sequence
          Length = 113117

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 532   ctctgagaggttaaatgatgaggt 555
             |||||||||||||| |||||||||
Sbjct: 66283 ctctgagaggttaagtgatgaggt 66260
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>emb|AL390242.17| Human DNA sequence from clone RP11-31F15 on chromosome 1p13.1-13.3
             Contains the 3' end of a novel gene, the 5' end of a novel
             gene and the 3' end of a novel gene, complete sequence
          Length = 68883

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tgaaacaaagaagagtatct 533
             ||||||||||||||||||||
Sbjct: 60212 tgaaacaaagaagagtatct 60193
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>emb|AL391117.8| Human DNA sequence from clone RP11-103B9 on chromosome 9, complete
             sequence
          Length = 159940

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   agaaggatttcattcaatta 229
             ||||||||||||||||||||
Sbjct: 76095 agaaggatttcattcaatta 76076
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>emb|AL157895.8| Human DNA sequence from clone RP11-354E11 on chromosome 10 Contains the
             5' end of a novel gene and a novel gene, complete sequence
          Length = 166317

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   acacactgcaattgtacata 139
             ||||||||||||||||||||
Sbjct: 44761 acacactgcaattgtacata 44742
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>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3
             Contains the 5' end of one variant of the AKAP2 (PALM2)
             gene for A kinase (PRKA) anchor protein 2 (paralemmin 2)
             and a CpG island, complete sequence
          Length = 133394

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   tatttattgagagaaaacta 205
             ||||||||||||||||||||
Sbjct: 70630 tatttattgagagaaaacta 70611
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>gb|AY142511.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
           complete cds
          Length = 2506

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 514 tgaaacaaagaagagtatctctga 537
           |||||||||||||||| |||||||
Sbjct: 174 tgaaacaaagaagagtctctctga 197
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>gb|AY051001.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
           complete cds
          Length = 2904

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 514 tgaaacaaagaagagtatctctga 537
           |||||||||||||||| |||||||
Sbjct: 388 tgaaacaaagaagagtctctctga 411
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>emb|AL929272.10| Mouse DNA sequence from clone RP23-69H10 on chromosome 11 Contains
            the 5' end of the Vrk2 gene for vaccinia related kinase 2
            and a CpG island, complete sequence
          Length = 196753

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  tctagagaaaaacttccaaa 351
            ||||||||||||||||||||
Sbjct: 6516 tctagagaaaaacttccaaa 6535
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>emb|AL831922.1|HSM803257 Homo sapiens mRNA; cDNA DKFZp761P0818 (from clone DKFZp761P0818)
          Length = 4070

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 tatttattgagagaaaactagaga 209
           ||||||||||||||||||| ||||
Sbjct: 871 tatttattgagagaaaacttgaga 894
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>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 514   tgaaacaaagaagagtatctctga 537
             |||||||||||||||| |||||||
Sbjct: 31077 tgaaacaaagaagagtctctctga 31100
to top
>emb|BX677665.17| Zebrafish DNA sequence from clone DKEY-25M3 in linkage group 12, complete
              sequence
          Length = 136144

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 509    tcagttgaaacaaagaagag 528
              ||||||||||||||||||||
Sbjct: 118613 tcagttgaaacaaagaagag 118632
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>emb|AL663039.18| Mouse DNA sequence from clone RP23-50H23 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 219899

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    tccaaaaggtgaatacacac 125
              ||||||||||||||||||||
Sbjct: 162696 tccaaaaggtgaatacacac 162677
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>gb|AC068302.18| Homo sapiens 3 BAC RP11-432D10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 141594

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   tatttattgagagaaaactagaga 209
             ||||||||||||||||||| ||||
Sbjct: 81551 tatttattgagagaaaacttgaga 81528
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>gb|AE010178.1| Pyrococcus furiosus DSM 3638, section 53 of 173 of the complete
            genome
          Length = 10646

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  ttgagagaaaactagagaag 211
            ||||||||||||||||||||
Sbjct: 4615 ttgagagaaaactagagaag 4596
to top
>ref|XR_001271.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ10307
            (LOC441191), misc RNA
          Length = 2931

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 532  ctctgagaggttaaatgatgaggt 555
            |||||||||||||| |||||||||
Sbjct: 2728 ctctgagaggttaagtgatgaggt 2751
to top
>ref|XM_935664.1| PREDICTED: Homo sapiens similar to ubiquitin conjugating enzyme 7
            interacting protein 1 isoform A (LOC641911), mRNA
          Length = 2931

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 532  ctctgagaggttaaatgatgaggt 555
            |||||||||||||| |||||||||
Sbjct: 2728 ctctgagaggttaagtgatgaggt 2751
to top
>ref|XM_928683.1| PREDICTED: Homo sapiens similar to ubiquitin conjugating enzyme 7
            interacting protein 1 isoform A (LOC645672), mRNA
          Length = 2931

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 532  ctctgagaggttaaatgatgaggt 555
            |||||||||||||| |||||||||
Sbjct: 2728 ctctgagaggttaagtgatgaggt 2751
to top
>gb|AC115811.12| Mus musculus chromosome 5, clone RP23-429M21, complete sequence
          Length = 180812

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    aacaaagaagagtatctctg 536
              ||||||||||||||||||||
Sbjct: 164510 aacaaagaagagtatctctg 164491
to top
>gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, complete cds
          Length = 2898

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 514 tgaaacaaagaagagtatctctga 537
           |||||||||||||||| |||||||
Sbjct: 413 tgaaacaaagaagagtctctctga 436
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 315     tctatgtgggtccaccatct 334
               ||||||||||||||||||||
Sbjct: 4908901 tctatgtgggtccaccatct 4908882
to top
>emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH64ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2686

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 514 tgaaacaaagaagagtatctctga 537
           |||||||||||||||| |||||||
Sbjct: 235 tgaaacaaagaagagtctctctga 258
to top
>gb|AC013246.13|AC013246 Homo sapiens 12 BAC RP11-997P16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161822

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   gaaaagggggtttcagttga 516
             ||||||||||||||||||||
Sbjct: 92553 gaaaagggggtttcagttga 92572
to top
>gb|AC073834.6| Homo sapiens BAC clone RP11-250N10 from 2, complete sequence
          Length = 172415

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tgagagaaaactagagaaga 212
              ||||||||||||||||||||
Sbjct: 165090 tgagagaaaactagagaaga 165071
to top
>gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3
          Length = 48689

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 514   tgaaacaaagaagagtatctctga 537
             |||||||||||||||| |||||||
Sbjct: 21201 tgaaacaaagaagagtctctctga 21178
to top
>gb|AC121306.12| Mus musculus chromosome 3, clone RP24-100C12, complete sequence
          Length = 195059

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    tttaagtcctctgttttagt 294
              ||||||||||||||||||||
Sbjct: 194780 tttaagtcctctgttttagt 194799
to top
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6, complete
              sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 509    tcagttgaaacaaagaagag 528
              ||||||||||||||||||||
Sbjct: 119842 tcagttgaaacaaagaagag 119823
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 315     tctatgtgggtccaccatct 334
               ||||||||||||||||||||
Sbjct: 4927685 tctatgtgggtccaccatct 4927666
to top
>gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosome 14, complete
             sequence
          Length = 216037

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   attcaacaagagagatgaac 428
             ||||||||||||||||||||
Sbjct: 49325 attcaacaagagagatgaac 49344
to top
>emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from BAC 344J2 map 3q21 region
             D3S3607-D3S1587, complete sequence
          Length = 98356

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   ctgagaggttaaatgatgag 553
             ||||||||||||||||||||
Sbjct: 65577 ctgagaggttaaatgatgag 65596
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>dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11D15, TM0065,
             complete sequence
          Length = 115046

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   taaagaaaagggggtttcag 512
             ||||||||||||||||||||
Sbjct: 20081 taaagaaaagggggtttcag 20100


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,298,233
Number of Sequences: 3902068
Number of extensions: 6298233
Number of successful extensions: 125935
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125705
Number of HSP's gapped (non-prelim): 226
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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