ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39i05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY634576.1| Triticum aestivum SET domain protein mRNA, complete cds Length = 1440 Score = 1068 bits (539), Expect = 0.0 Identities = 602/623 (96%) Strand = Plus / Plus Query: 16 atctgggactgaatcgataccagtgtgtctcgtcaatgaggttgaccatgagaaaggacc 75 |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 504 atctgggattgaatcgatcccagtgtgtctcgtcaatgaggtagaccatgagaaaggacc 563 Query: 76 tgggcagttcacctatactaatcaggtcaaatacttgagaccgctcagttccatgacacc 135 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 564 tgggcagttcacctatactaatcaggtcaaatacttgagacccgtcagttccatgacacc 623 Query: 136 catgcagggttgtggttgccagagtgtttgcctacctggtgatgctaactgcgcttgtgg 195 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 624 catgcagggttgtggttgccagagtgtttgcctacctggtgatgccaactgtgcttgtgg 683 Query: 196 gcaacataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcc 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 gcaacataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcc 743 Query: 256 tgtaatatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgag 315 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 aatagtatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgag 803 Query: 316 ccaaaaagggatcaggttccactttgaggtctttaggacggtaaatcgaggctggggtct 375 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 804 ccaaaaagggatcaggttccactttgaggtcttcaggacggcaaatcgaggctggggtct 863 Query: 376 tcgctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcat 435 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 864 tcgctgttgggagcctattcgtgctggtgcatttatttgtgagtatactggggaggtcat 923 Query: 436 cgatgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtg 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 cgatgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtg 983 Query: 496 ccctggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcac 555 |||||||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 984 ccctggtgagaagacgctaaaatggaatttcgggcctgagcttataggtgagcaaagcac 1043 Query: 556 gtacgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatggg 615 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1044 gtacgtatcagctgaggaatttcagccactgcccatcaagataagtgcaaaaaagatggg 1103 Query: 616 aaatgtctcacgtttcatgaacc 638 ||||||||| ||||||||||||| Sbjct: 1104 aaatgtctcgcgtttcatgaacc 1126
>ref|XM_475460.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2019 Score = 587 bits (296), Expect = e-164 Identities = 518/592 (87%) Strand = Plus / Plus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||| ||||||||||||||||||||||| ||||||||| | | ||| |||||| Sbjct: 1219 gtcaatgaggtagaccatgagaaaggacctgggcatttcacctatgccagtcaagtcaaa 1278 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 |||||||| || |||||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 1279 tacttgaggcccctcagttctatgaaacccttacagggttgcggatgccagagtgtttgc 1338 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || ||||||||| | ||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 1339 ctgcctggtgatcccaactgtgcttgtggacaacataacggaggtgacttaccttacagc 1398 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 ||||||||| | |||| |||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 1399 tcatcaggacttttggcgtgccgcaagccaataatttatgaatgcggtgatgcttgccat 1458 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||||| |||||| ||||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 1459 tgtactacgaattgccggaacagagtgacccaaaaaggggtcagatttcactttgaggtc 1518 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || |||| | |||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 1519 ttccggactgcaaatcgaggctggggtcttcgctgctgggatcccattcgtgctggtgca 1578 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| ||||||||| ||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 1579 tttatctgtgagtatactggtgaggtcattgatgagctcaaagttaatctggatgacagt 1638 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 |||||||||||||||||||||||||| || |||||||||||||| | |||| || ||| Sbjct: 1639 gaagatgattacatttttcagactgtatgtcctggtgagaagacattaaaattcaacttt 1698 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||| |||| || ||| | || || || ||||||||||| |||||| ||||| || Sbjct: 1699 ggtcctgaattgattggtgaggagagtacatatgtatcagctgatgaatttgagccactg 1758 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1759 cccatcaagattagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 1810
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 587 bits (296), Expect = e-164 Identities = 518/592 (87%) Strand = Plus / Minus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||| ||||||||||||||||||||||| ||||||||| | | ||| |||||| Sbjct: 40974 gtcaatgaggtagaccatgagaaaggacctgggcatttcacctatgccagtcaagtcaaa 40915 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 |||||||| || |||||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 40914 tacttgaggcccctcagttctatgaaacccttacagggttgcggatgccagagtgtttgc 40855 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || ||||||||| | ||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 40854 ctgcctggtgatcccaactgtgcttgtggacaacataacggaggtgacttaccttacagc 40795 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 ||||||||| | |||| |||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 40794 tcatcaggacttttggcgtgccgcaagccaataatttatgaatgcggtgatgcttgccat 40735 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||||| |||||| ||||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 40734 tgtactacgaattgccggaacagagtgacccaaaaaggggtcagatttcactttgaggtc 40675 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || |||| | |||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 40674 ttccggactgcaaatcgaggctggggtcttcgctgctgggatcccattcgtgctggtgca 40615 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| ||||||||| ||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 40614 tttatctgtgagtatactggtgaggtcattgatgagctcaaagttaatctggatgacagt 40555 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 |||||||||||||||||||||||||| || |||||||||||||| | |||| || ||| Sbjct: 40554 gaagatgattacatttttcagactgtatgtcctggtgagaagacattaaaattcaacttt 40495 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||| |||| || ||| | || || || ||||||||||| |||||| ||||| || Sbjct: 40494 ggtcctgaattgattggtgaggagagtacatatgtatcagctgatgaatttgagccactg 40435 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 40434 cccatcaagattagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 40383
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 587 bits (296), Expect = e-164 Identities = 518/592 (87%) Strand = Plus / Minus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||| ||||||||||||||||||||||| ||||||||| | | ||| |||||| Sbjct: 23972485 gtcaatgaggtagaccatgagaaaggacctgggcatttcacctatgccagtcaagtcaaa 23972426 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 |||||||| || |||||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 23972425 tacttgaggcccctcagttctatgaaacccttacagggttgcggatgccagagtgtttgc 23972366 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || ||||||||| | ||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 23972365 ctgcctggtgatcccaactgtgcttgtggacaacataacggaggtgacttaccttacagc 23972306 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 ||||||||| | |||| |||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 23972305 tcatcaggacttttggcgtgccgcaagccaataatttatgaatgcggtgatgcttgccat 23972246 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||||| |||||| ||||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 23972245 tgtactacgaattgccggaacagagtgacccaaaaaggggtcagatttcactttgaggtc 23972186 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || |||| | |||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 23972185 ttccggactgcaaatcgaggctggggtcttcgctgctgggatcccattcgtgctggtgca 23972126 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| ||||||||| ||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 23972125 tttatctgtgagtatactggtgaggtcattgatgagctcaaagttaatctggatgacagt 23972066 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 |||||||||||||||||||||||||| || |||||||||||||| | |||| || ||| Sbjct: 23972065 gaagatgattacatttttcagactgtatgtcctggtgagaagacattaaaattcaacttt 23972006 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||| |||| || ||| | || || || ||||||||||| |||||| ||||| || Sbjct: 23972005 ggtcctgaattgattggtgaggagagtacatatgtatcagctgatgaatttgagccactg 23971946 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23971945 cccatcaagattagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 23971894
>dbj|AK069035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N15, full insert sequence Length = 2721 Score = 587 bits (296), Expect = e-164 Identities = 518/592 (87%) Strand = Plus / Plus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||| ||||||||||||||||||||||| ||||||||| | | ||| |||||| Sbjct: 1498 gtcaatgaggtagaccatgagaaaggacctgggcatttcacctatgccagtcaagtcaaa 1557 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 |||||||| || |||||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 1558 tacttgaggcccctcagttctatgaaacccttacagggttgcggatgccagagtgtttgc 1617 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || ||||||||| | ||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 1618 ctgcctggtgatcccaactgtgcttgtggacaacataacggaggtgacttaccttacagc 1677 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 ||||||||| | |||| |||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 1678 tcatcaggacttttggcgtgccgcaagccaataatttatgaatgcggtgatgcttgccat 1737 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||||| |||||| ||||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 1738 tgtactacgaattgccggaacagagtgacccaaaaaggggtcagatttcactttgaggtc 1797 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || |||| | |||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 1798 ttccggactgcaaatcgaggctggggtcttcgctgctgggatcccattcgtgctggtgca 1857 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| ||||||||| ||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 1858 tttatctgtgagtatactggtgaggtcattgatgagctcaaagttaatctggatgacagt 1917 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 |||||||||||||||||||||||||| || |||||||||||||| | |||| || ||| Sbjct: 1918 gaagatgattacatttttcagactgtatgtcctggtgagaagacattaaaattcaacttt 1977 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||| |||| || ||| | || || || ||||||||||| |||||| ||||| || Sbjct: 1978 ggtcctgaattgattggtgaggagagtacatatgtatcagctgatgaatttgagccactg 2037 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2038 cccatcaagattagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 2089
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 583 bits (294), Expect = e-163 Identities = 517/592 (87%) Strand = Plus / Plus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||| ||||||||||||||||||||||| ||||||||| | | ||| |||||| Sbjct: 39924 gtcaatgaggtagaccatgagaaaggacctgggcatttcacctatgccagtcaagtcaaa 39983 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 |||||||| || |||||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 39984 tacttgaggcccctcagttctatgaaacccttacagggttgcggatgccagagtgtttgc 40043 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || ||||||||| | ||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 40044 ctgcctggtgatcccaactgtgcttgtggacaacataacggaggtgacttaccttacagc 40103 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 ||||||||| | |||| |||||||||||| |||| |||||||| |||| ||||||||| Sbjct: 40104 tcatcaggacttttggcgtgccgcaagccaataatttatgaatgcggtgrtgcttgccat 40163 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||||| |||||| ||||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 40164 tgtactacgaattgccggaacagagtgacccaaaaaggggtcagatttcactttgaggtc 40223 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || |||| | |||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 40224 ttccggactgcaaatcgaggctggggtcttcgctgctgggatcccattcgtgctggtgca 40283 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| ||||||||| ||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 40284 tttatctgtgagtatactggtgaggtcattgatgagctcaaagttaatctggatgacagt 40343 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 |||||||||||||||||||||||||| || |||||||||||||| | |||| || ||| Sbjct: 40344 gaagatgattacatttttcagactgtatgtcctggtgagaagacattaaaattcaacttt 40403 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||| |||| || ||| | || || || ||||||||||| |||||| ||||| || Sbjct: 40404 ggtcctgaattgattggtgaggagagtacatatgtatcagctgatgaatttgagccactg 40463 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 40464 cccatcaagattagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 40515
>gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, complete sequence Length = 2562 Score = 523 bits (264), Expect = e-145 Identities = 519/604 (85%) Strand = Plus / Minus Query: 35 ccagtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatact 94 ||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 1264 ccagtttgtcttgtcaatgaggtagaccatgagaaaggacctggacatttcacctatact 1205 Query: 95 aatcaggtcaaatacttgagaccgctcagttccatgacacccatgcagggttgtggttgc 154 |||||||||||||||||||| || |||||||| |||| | ||||||| ||||| ||| Sbjct: 1204 aatcaggtcaaatacttgaggcctctcagttctatgaaaaagttgcagggctgtggatgc 1145 Query: 155 cagagtgtttgcctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgat 214 |||||||||||||| ||||||||||| | || |||||||| |||||||| ||||||||| Sbjct: 1144 cagagtgtttgcctgcctggtgatgccagttgtgcttgtggacaacataatggaggtgat 1085 Query: 215 ctaccgtacagctcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggt 274 |||| ||||| || | |||| ||||| |||||||| || | || |||||||||||| Sbjct: 1084 ttaccctacagttcgttaggattgttgtcatgccgcaaaccgatgatctatgaatgtggt 1025 Query: 275 gaagcttgccattgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttc 334 ||| ||||| | ||| | ||||| ||||||||||||| |||||||||| |||| | Sbjct: 1024 gaatcttgcaactgttctacaaattgccggaacagagtgacccaaaaaggggccaggcta 965 Query: 335 cactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagcctatt 394 || ||||||||||| ||||| ||||||||||||||||||||||||||||| ||| || Sbjct: 964 cattttgaggtcttcaggaccaccaatcgaggctggggtcttcgctgttgggaacctgtt 905 Query: 395 cgtgctggtgcatttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaac 454 ||||||||| ||||||| |||||||||| ||| |||||||| |||||||| |||||||| Sbjct: 904 cgtgctggttcatttatatgtgagtatgctggcgaggtcattgatgagctcaaagttaat 845 Query: 455 ttggatgacagtgaagatgattacatttttcagactgtgtgccctggtgagaagacgctg 514 ||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 844 ttgaatgatagtgaagatgattacatttttcaaactgtatgccctggtgagaagacttta 785 Query: 515 aaatggaattttgggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaa 574 |||||||||| ||| |||||||||||||| || | |||||||| ||||||||||| ||| Sbjct: 784 aaatggaattgtggacctgaactgataggtgaagatagcacgtatgtatcagctgatgaa 725 Query: 575 tttcagccattgcccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatg 634 ||| ||||| |||| |||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 724 tttgagccactgcctatcaagataagtgcaaaaaacatgggaaatgtctcccgtttcatg 665 Query: 635 aacc 638 |||| Sbjct: 664 aacc 661
>gb|AY187718.2| Zea mays SET domain protein SDG111 mRNA, complete cds Length = 2413 Score = 420 bits (212), Expect = e-114 Identities = 497/592 (83%) Strand = Plus / Plus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 1229 gtcaatgaggttgaccatgagaaaggacctgcacatttcacctatactaaccaggtcaaa 1288 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 ||| |||| || |||||||| |||| | ||||||| ||||| ||||||||||||||| Sbjct: 1289 tacgtgaggcctctcagttctatgaaaaagctgcagggctgtggatgccagagtgtttgc 1348 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || || |||||||| | || |||||||| |||||||| ||||||||| |||| ||||| Sbjct: 1349 ctgcccggtgatgccagttgtgcttgtggacaacataatggaggtgatttaccctacagt 1408 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 |||| |||| | ||| |||||||| || | || ||||||||||||||| ||||| | Sbjct: 1409 tcattaggattattgtcatgccgcaaaccgatgatctatgaatgtggtgaatcttgcaac 1468 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||| | ||||| ||||||||||||| |||||||||| |||| | || ||||||||| Sbjct: 1469 tgttctacaaattgccggaacagagtgacccaaaaagggcccaggctacattttgaggtc 1528 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || ||||| |||||||||||||||||||| || ||||| ||| ||||||||||| || Sbjct: 1529 ttcaggaccaccaatcgaggctggggtcttcgttgctgggaacctgttcgtgctggttca 1588 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| |||||||||| ||| |||||||| ||||| || |||||||| ||| |||||| Sbjct: 1589 tttatatgtgagtatgctggtgaggtcattgatgaactcaaagttaatttgaatgacacc 1648 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 |||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||| | Sbjct: 1649 gaagatgattacatttttcaaactgtatgccctggtgagaagactttaaaatggaattgt 1708 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||||| |||| || ||||| || ||||| ||||| |||||| ||||| || Sbjct: 1709 ggacctgaactattaggtgaagctagcacatatgtatcggctgatgaatttgagccactg 1768 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 || |||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1769 cctatcaagataagtgcaaaaaacatgggaaatgtctcccgtttcatgaacc 1820
>gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, complete cds Length = 2487 Score = 392 bits (198), Expect = e-106 Identities = 498/598 (83%) Strand = Plus / Plus Query: 41 tgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcag 100 ||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||| Sbjct: 1345 tgtctcgtcaatgaggtagaccatgagaaaggacctgtacatttcacttatactaatcag 1404 Query: 101 gtcaaatacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagt 160 |||||||||||||| || |||||||| |||| | ||||||| ||||| |||||||| Sbjct: 1405 gtcaaatacttgaggcctctcagttctatgaaaaagttgcagggctgtggatgccagagc 1464 Query: 161 gtttgcctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccg 220 |||||| | ||||| || || | || |||||||| |||||||| ||||| ||| |||| Sbjct: 1465 gtttgcttgcctggcgacgccagttgtgcttgtggacaacataatggaggcgatttaccc 1524 Query: 221 tacagctcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagct 280 | ||| ||||||||| ||||| |||||||| || || | || |||||||||||| || Sbjct: 1525 ttcagttcatcaggattgttgtcatgccgcaaaccaatagtctacgaatgtggtgaatct 1584 Query: 281 tgccattgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccacttt 340 ||| | ||| | ||||| |||||||||||| |||||||||| |||| | || || Sbjct: 1585 tgcaactgttctacaaattgcaggaacagagtgacccaaaaagggtccaggctacatttc 1644 Query: 341 gaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgct 400 |||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1645 gaggtcttcaggaccacaaatcgaggctggggtcttcgctgctgggaacctattcgtgct 1704 Query: 401 ggtgcatttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggat 460 ||| ||||||| |||||||||| || ||||| || |||||||| ||| |||| ||| || Sbjct: 1705 ggttcatttatatgtgagtatgccggtgaggttattgatgagctcaaatttaatttgaat 1764 Query: 461 gacagtgaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatgg 520 || ||||||||||||||||||||||| ||||| |||||||| |||||||| | |||||| Sbjct: 1765 gatagtgaagatgattacatttttcaaactgtatgccctggcgagaagacattaaaatgg 1824 Query: 521 aattttgggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcag 580 |||| ||| |||||||||||||| || |||||| || ||||| |||| |||||| | Sbjct: 1825 aattatggacctgaactgataggtgaagtaagcacatatgtatcgcctgatgaatttgaa 1884 Query: 581 ccattgcccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 ||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1885 ccactgcctgtcaagataagtgcaaaaaacatgggaaatgtctcccgtttcatgaacc 1942
>gb|AY109913.1| Zea mays CL3507_1 mRNA sequence Length = 1269 Score = 335 bits (169), Expect = 1e-88 Identities = 481/592 (81%) Strand = Plus / Minus Query: 47 gtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaatcaggtcaaa 106 ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 1181 gtcaatgaggttgaccatgagaaaggacctgcacatttcacctatactaaccaggtcaaa 1122 Query: 107 tacttgagaccgctcagttccatgacacccatgcagggttgtggttgccagagtgtttgc 166 ||| |||| || |||||||| ||| ||||||| ||||| ||||||||||||||| Sbjct: 1121 tacgtgaggcctctcagttctatgnnnnngctgcagggctgtggatgccagagtgtttgc 1062 Query: 167 ctacctggtgatgctaactgcgcttgtgggcaacataacggaggtgatctaccgtacagc 226 || || |||||||| | || |||||||| |||||||| ||||||||| |||| ||||| Sbjct: 1061 ctgcccggtgatgccagttgtgcttgtggacaacataatggaggtgatttaccctacagt 1002 Query: 227 tcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtgaagcttgccat 286 |||| |||| | ||| |||||||| || | || ||||||||||||||| ||||| | Sbjct: 1001 tcattaggattattgtcatgccgcaaaccgatgatctatgaatgtggtgaatcttgcaac 942 Query: 287 tgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttccactttgaggtc 346 ||| | ||||| ||||||||||||| || ||| |||| | || ||||||||| Sbjct: 941 tgttctacaaattgccggaacagagtgacccnnnnngggcccaggctacattttgaggtc 882 Query: 347 tttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattcgtgctggtgca 406 || ||||| |||||||||||||||||||| || ||||| ||| ||||||||||| || Sbjct: 881 ttcaggaccaccaatcgaggctggggtcttcgttgctgggaacctgttcgtgctggttca 822 Query: 407 tttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaacttggatgacagt 466 ||||| |||||||||| ||| |||||||| ||||| || |||||||| ||| |||||| Sbjct: 821 tttatatgtgagtatgctggtgaggtcattgatgaactcaaagttaatttgaatgacacc 762 Query: 467 gaagatgattacatttttcagactgtgtgccctggtgagaagacgctgaaatggaatttt 526 ||||||||||||| || ||||| ||||||||||||||||| | |||||||||| | Sbjct: 761 gaagatgattacannnnncaaactgtatgccctggtgagaagactttaaaatggaattgt 702 Query: 527 gggcctgaactgataggcgagcaaagcacgtacgtatcagctgaggaatttcagccattg 586 || |||||||||||||| || | ||||| || ||||| ||||| |||||| ||||| || Sbjct: 701 ggacctgaactgataggtgaagatagcacatatgtatcggctgatgaatttgagccactg 642 Query: 587 cccatcaagataagtgcaaaaaagatgggaaatgtctcacgtttcatgaacc 638 || |||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 641 cctatcaagataagtgcnnnnnncatgggaaatgtctgccgtttcatgaacc 590
>gb|BT024023.1| Zea mays clone EL01N0414B01 mRNA sequence Length = 1607 Score = 331 bits (167), Expect = 2e-87 Identities = 380/451 (84%) Strand = Plus / Plus Query: 188 gcttgtgggcaacataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgc 247 |||||||| |||||||| ||||||||| |||| ||||| |||| |||| | ||| ||| Sbjct: 581 gcttgtggacaacataatggaggtgatttaccctacagttcattaggattattgtcatgc 640 Query: 248 cgcaagcctgtaatatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaac 307 ||||| || | || ||||||||||||||| ||||| | ||| | ||||| |||||| Sbjct: 641 cgcaaaccgatgatctatgaatgtggtgaatcttgcaactgttctacaaattgccggaac 700 Query: 308 agagtgagccaaaaagggatcaggttccactttgaggtctttaggacggtaaatcgaggc 367 ||||||| |||||||||| |||| | || ||||||||||| ||||| ||||||||| Sbjct: 701 agagtgacccaaaaagggcccaggctacattttgaggtcttcaggaccaccaatcgaggc 760 Query: 368 tggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggg 427 ||||||||||| || ||||| ||| ||||||||||| ||||||| |||||||||| ||| Sbjct: 761 tggggtcttcgttgctgggaacctgttcgtgctggttcatttatatgtgagtatgctggt 820 Query: 428 gaggtcatcgatgagcttaaagttaacttggatgacagtgaagatgattacatttttcag 487 |||||||| ||||| || |||||||| ||| |||||| |||||||||||||||||||| Sbjct: 821 gaggtcattgatgaactcaaagttaatttgaatgacaccgaagatgattacatttttcaa 880 Query: 488 actgtgtgccctggtgagaagacgctgaaatggaattttgggcctgaactgataggcgag 547 ||||| ||||||||||||||||| | |||||||||| ||| |||||||||||||| || Sbjct: 881 actgtatgccctggtgagaagactttaaaatggaattgtggacctgaactgataggtgaa 940 Query: 548 caaagcacgtacgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaa 607 | ||||| || ||||| ||||| |||||| ||||| |||| |||||||||||||||||| Sbjct: 941 gatagcacatatgtatcggctgatgaatttgagccactgcctatcaagataagtgcaaaa 1000 Query: 608 aagatgggaaatgtctcacgtttcatgaacc 638 || |||||||||||||| ||||||||||||| Sbjct: 1001 aacatgggaaatgtctcccgtttcatgaacc 1031
>ref|NM_191045.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2211 Score = 163 bits (82), Expect = 9e-37 Identities = 353/440 (80%), Gaps = 5/440 (1%) Strand = Plus / Plus Query: 200 cataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcctgta 259 ||||| |||||||| |||||||||| ||||| ||| || | || || ||||||| | | Sbjct: 1561 cataatggaggtgacttaccgtacagttcatccggattgcttgtatgtcgcaagcttatg 1620 Query: 260 atatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagccaa 319 ||||||||||||||||| |||||| ||| | | || ||||| || || || |||| | Sbjct: 1621 gtatatgaatgtggtgaatcttgccgatgttcaatcaactgtcgtaatagggt-agccca 1679 Query: 320 aaaggga-tcaggttccactttgaggtctttaggacggtaaatcgaggctggggtcttcg 378 ||||||| | ||| ||||| |||||||||| ||||| ||||||||||||||||||||| Sbjct: 1680 aaagggagtaaggatccaccttgaggtcttcaggacaacaaatcgaggctggggtcttcg 1739 Query: 379 ctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcatcga 438 | ||||| ||||| || ||||| |||||||||||||||||||||| ||||| | || Sbjct: 1740 ttcatgggatcctatacgggctgggtcatttatttgtgagtatgttggtgaggttgttga 1799 Query: 439 tgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtgccc 498 ||| ||||||||| ||||||| ||||||||||||| |||||| ||||| || || Sbjct: 1800 tgatactaaagttaatttggatg---gtgaagatgattatctttttcgaactgtctgtcc 1856 Query: 499 tggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcacgta 558 ||| |||||||| | |||||||||| |||||||||| ||||||| || || |||| | Sbjct: 1857 tggcgagaagacattaaaatggaattatgggcctgaattgataggggaacacagcataaa 1916 Query: 559 cgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatgggaaa 618 | |||||||| ||| |||| ||||||||||||||||||||| || |||||||| Sbjct: 1917 tatttcagctgatacttttgagccgctgcccatcaagataagtgcaatgaaaatgggaaa 1976 Query: 619 tgtctcacgtttcatgaacc 638 ||| ||||||||||||||| Sbjct: 1977 tgttgcacgtttcatgaacc 1996 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 35 ccagtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatact 94 ||||||||||| ||||||| ||| || |||||||||||| ||||| |||| ||||| | Sbjct: 1396 ccagtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatatt 1455 Query: 95 aatcaggtcaaatacttga 113 | ||||||||| ||||||| Sbjct: 1456 actcaggtcaagtacttga 1474
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 163 bits (82), Expect = 9e-37 Identities = 353/440 (80%), Gaps = 5/440 (1%) Strand = Plus / Plus Query: 200 cataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcctgta 259 ||||| |||||||| |||||||||| ||||| ||| || | || || ||||||| | | Sbjct: 34476109 cataatggaggtgacttaccgtacagttcatccggattgcttgtatgtcgcaagcttatg 34476168 Query: 260 atatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagccaa 319 ||||||||||||||||| |||||| ||| | | || ||||| || || || |||| | Sbjct: 34476169 gtatatgaatgtggtgaatcttgccgatgttcaatcaactgtcgtaatagggt-agccca 34476227 Query: 320 aaaggga-tcaggttccactttgaggtctttaggacggtaaatcgaggctggggtcttcg 378 ||||||| | ||| ||||| |||||||||| ||||| ||||||||||||||||||||| Sbjct: 34476228 aaagggagtaaggatccaccttgaggtcttcaggacaacaaatcgaggctggggtcttcg 34476287 Query: 379 ctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcatcga 438 | ||||| ||||| || ||||| |||||||||||||||||||||| ||||| | || Sbjct: 34476288 ttcatgggatcctatacgggctgggtcatttatttgtgagtatgttggtgaggttgttga 34476347 Query: 439 tgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtgccc 498 ||| ||||||||| ||||||| ||||||||||||| |||||| ||||| || || Sbjct: 34476348 tgatactaaagttaatttggatg---gtgaagatgattatctttttcgaactgtctgtcc 34476404 Query: 499 tggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcacgta 558 ||| |||||||| | |||||||||| |||||||||| ||||||| || || |||| | Sbjct: 34476405 tggcgagaagacattaaaatggaattatgggcctgaattgataggggaacacagcataaa 34476464 Query: 559 cgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatgggaaa 618 | |||||||| ||| |||| ||||||||||||||||||||| || |||||||| Sbjct: 34476465 tatttcagctgatacttttgagccgctgcccatcaagataagtgcaatgaaaatgggaaa 34476524 Query: 619 tgtctcacgtttcatgaacc 638 ||| ||||||||||||||| Sbjct: 34476525 tgttgcacgtttcatgaacc 34476544 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 35 ccagtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatact 94 ||||||||||| ||||||| ||| || |||||||||||| ||||| |||| ||||| | Sbjct: 34475944 ccagtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatatt 34476003 Query: 95 aatcaggtcaaatacttga 113 | ||||||||| ||||||| Sbjct: 34476004 actcaggtcaagtacttga 34476022
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 163 bits (82), Expect = 9e-37 Identities = 353/440 (80%), Gaps = 5/440 (1%) Strand = Plus / Plus Query: 200 cataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcctgta 259 ||||| |||||||| |||||||||| ||||| ||| || | || || ||||||| | | Sbjct: 158453 cataatggaggtgacttaccgtacagttcatccggattgcttgtatgtcgcaagcttatg 158512 Query: 260 atatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagccaa 319 ||||||||||||||||| |||||| ||| | | || ||||| || || || |||| | Sbjct: 158513 gtatatgaatgtggtgaatcttgccgatgttcaatcaactgtcgtaatagggt-agccca 158571 Query: 320 aaaggga-tcaggttccactttgaggtctttaggacggtaaatcgaggctggggtcttcg 378 ||||||| | ||| ||||| |||||||||| ||||| ||||||||||||||||||||| Sbjct: 158572 aaagggagtaaggatccaccttgaggtcttcaggacaacaaatcgaggctggggtcttcg 158631 Query: 379 ctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcatcga 438 | ||||| ||||| || ||||| |||||||||||||||||||||| ||||| | || Sbjct: 158632 ttcatgggatcctatacgggctgggtcatttatttgtgagtatgttggtgaggttgttga 158691 Query: 439 tgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtgccc 498 ||| ||||||||| ||||||| ||||||||||||| |||||| ||||| || || Sbjct: 158692 tgatactaaagttaatttggatg---gtgaagatgattatctttttcgaactgtctgtcc 158748 Query: 499 tggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcacgta 558 ||| |||||||| | |||||||||| |||||||||| ||||||| || || |||| | Sbjct: 158749 tggcgagaagacattaaaatggaattatgggcctgaattgataggggaacacagcataaa 158808 Query: 559 cgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatgggaaa 618 | |||||||| ||| |||| ||||||||||||||||||||| || |||||||| Sbjct: 158809 tatttcagctgatacttttgagccgctgcccatcaagataagtgcaatgaaaatgggaaa 158868 Query: 619 tgtctcacgtttcatgaacc 638 ||| ||||||||||||||| Sbjct: 158869 tgttgcacgtttcatgaacc 158888 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 35 ccagtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatact 94 ||||||||||| ||||||| ||| || |||||||||||| ||||| |||| ||||| | Sbjct: 158288 ccagtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatatt 158347 Query: 95 aatcaggtcaaatacttga 113 | ||||||||| ||||||| Sbjct: 158348 actcaggtcaagtacttga 158366
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 163 bits (82), Expect = 9e-37 Identities = 353/440 (80%), Gaps = 5/440 (1%) Strand = Plus / Plus Query: 200 cataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcctgta 259 ||||| |||||||| |||||||||| ||||| ||| || | || || ||||||| | | Sbjct: 51828 cataatggaggtgacttaccgtacagttcatccggattgcttgtatgtcgcaagcttatg 51887 Query: 260 atatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagccaa 319 ||||||||||||||||| |||||| ||| | | || ||||| || || || |||| | Sbjct: 51888 gtatatgaatgtggtgaatcttgccgatgttcaatcaactgtcgtaatagggt-agccca 51946 Query: 320 aaaggga-tcaggttccactttgaggtctttaggacggtaaatcgaggctggggtcttcg 378 ||||||| | ||| ||||| |||||||||| ||||| ||||||||||||||||||||| Sbjct: 51947 aaagggagtaaggatccaccttgaggtcttcaggacaacaaatcgaggctggggtcttcg 52006 Query: 379 ctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcatcga 438 | ||||| ||||| || ||||| |||||||||||||||||||||| ||||| | || Sbjct: 52007 ttcatgggatcctatacgggctgggtcatttatttgtgagtatgttggtgaggttgttga 52066 Query: 439 tgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtgccc 498 ||| ||||||||| ||||||| ||||||||||||| |||||| ||||| || || Sbjct: 52067 tgatactaaagttaatttggatg---gtgaagatgattatctttttcgaactgtctgtcc 52123 Query: 499 tggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcacgta 558 ||| |||||||| | |||||||||| |||||||||| ||||||| || || |||| | Sbjct: 52124 tggcgagaagacattaaaatggaattatgggcctgaattgataggggaacacagcataaa 52183 Query: 559 cgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatgggaaa 618 | |||||||| ||| |||| ||||||||||||||||||||| || |||||||| Sbjct: 52184 tatttcagctgatacttttgagccgctgcccatcaagataagtgcaatgaaaatgggaaa 52243 Query: 619 tgtctcacgtttcatgaacc 638 ||| ||||||||||||||| Sbjct: 52244 tgttgcacgtttcatgaacc 52263 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 35 ccagtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatact 94 ||||||||||| ||||||| ||| || |||||||||||| ||||| |||| ||||| | Sbjct: 51663 ccagtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatatt 51722 Query: 95 aatcaggtcaaatacttga 113 | ||||||||| ||||||| Sbjct: 51723 actcaggtcaagtacttga 51741
>dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H03, full insert sequence Length = 2926 Score = 163 bits (82), Expect = 9e-37 Identities = 353/440 (80%), Gaps = 5/440 (1%) Strand = Plus / Plus Query: 200 cataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcctgta 259 ||||| |||||||| |||||||||| ||||| ||| || | || || ||||||| | | Sbjct: 1864 cataatggaggtgacttaccgtacagttcatccggattgcttgtatgtcgcaagcttatg 1923 Query: 260 atatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagccaa 319 ||||||||||||||||| |||||| ||| | | || ||||| || || || |||| | Sbjct: 1924 gtatatgaatgtggtgaatcttgccgatgttcaatcaactgtcgtaatagggt-agccca 1982 Query: 320 aaaggga-tcaggttccactttgaggtctttaggacggtaaatcgaggctggggtcttcg 378 ||||||| | ||| ||||| |||||||||| ||||| ||||||||||||||||||||| Sbjct: 1983 aaagggagtaaggatccaccttgaggtcttcaggacaacaaatcgaggctggggtcttcg 2042 Query: 379 ctgttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcatcga 438 | ||||| ||||| || ||||| |||||||||||||||||||||| ||||| | || Sbjct: 2043 ttcatgggatcctatacgggctgggtcatttatttgtgagtatgttggtgaggttgttga 2102 Query: 439 tgagcttaaagttaacttggatgacagtgaagatgattacatttttcagactgtgtgccc 498 ||| ||||||||| ||||||| ||||||||||||| |||||| ||||| || || Sbjct: 2103 tgatactaaagttaatttggatg---gtgaagatgattatctttttcgaactgtctgtcc 2159 Query: 499 tggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcacgta 558 ||| |||||||| | |||||||||| |||||||||| ||||||| || || |||| | Sbjct: 2160 tggcgagaagacattaaaatggaattatgggcctgaattgataggggaacacagcataaa 2219 Query: 559 cgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatgggaaa 618 | |||||||| ||| |||| ||||||||||||||||||||| || |||||||| Sbjct: 2220 tatttcagctgatacttttgagccgctgcccatcaagataagtgcaatgaaaatgggaaa 2279 Query: 619 tgtctcacgtttcatgaacc 638 ||| ||||||||||||||| Sbjct: 2280 tgttgcacgtttcatgaacc 2299 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 35 ccagtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatact 94 ||||||||||| ||||||| ||| || |||||||||||| ||||| |||| ||||| | Sbjct: 1699 ccagtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatatt 1758 Query: 95 aatcaggtcaaatacttga 113 | ||||||||| ||||||| Sbjct: 1759 actcaggtcaagtacttga 1777
>gb|AY106773.1| Zea mays PCO114386 mRNA sequence Length = 772 Score = 163 bits (82), Expect = 9e-37 Identities = 278/341 (81%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 216 taccgtacagctcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtg 275 |||| ||||||||||||||| || | || ||||||||| || | | ||||||||||||| Sbjct: 158 taccttacagctcatcaggactgcttgtatgccgcaagactatggtttatgaatgtggtg 217 Query: 276 aagcttgccattgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttcc 335 || | || | ||| | | |||||||| |||||||||| ||| ||||| | ||| ||| Sbjct: 218 aatcctgtcggtgttctttcaattgtcgtaacagagtgacccagaaaggagttaggatcc 277 Query: 336 actttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattc 395 ||||||||||||||| ||||| ||||||||||||||||||||| | ||||| |||| | Sbjct: 278 actttgaggtctttaagacgggaaatcgaggctggggtcttcgttcgtgggacgctatac 337 Query: 396 gtgctggtgcatttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaact 455 | |||||| ||||||| || ||||||||||| ||||| || ||||| ||| |||| | Sbjct: 338 gggctggttcatttatatgcgagtatgttggtgaggttattgatgatgctaacattaatt 397 Query: 456 tggatgacagtgaagatgattacatttttcagactgt-gtgccctggtgagaagacgctg 514 || |||| | |||||||||||| || ||||||| ||| ||| |||||||||| ||| | Sbjct: 398 tgaatgatattgaagatgattatatatttcaga-tgtcgtgtcctggtgagangacatta 456 Query: 515 aaatggaattttgggcctgaactgataggcgagcaaagcac 555 |||||||||||||| |||||| ||||| | ||||||||||| Sbjct: 457 aaatggaattttggacctgaattgataagggagcaaagcac 497
>gb|AF545813.1| Zea mays SET domain protein 113 (sdg113) mRNA, complete cds Length = 2428 Score = 161 bits (81), Expect = 3e-36 Identities = 278/341 (81%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 216 taccgtacagctcatcaggagtgttggtgtgccgcaagcctgtaatatatgaatgtggtg 275 |||| ||||||||||||||| || | || ||||||||| || | | ||||||||||||| Sbjct: 1704 taccttacagctcatcaggactgcttgtatgccgcaagactatggtttatgaatgtggtg 1763 Query: 276 aagcttgccattgtaccctgaattgtcggaacagagtgagccaaaaagggatcaggttcc 335 || | || | ||| | | |||||||| |||||||||| ||| ||||| | ||| ||| Sbjct: 1764 aatcctgtcggtgttctttcaattgtcgtaacagagtgacccagaaaggagttaggatcc 1823 Query: 336 actttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagcctattc 395 ||||||||||||||| ||||| ||||||||||||||||||||| | ||||| |||| | Sbjct: 1824 actttgaggtctttaagacgggaaatcgaggctggggtcttcgttcgtgggacgctatac 1883 Query: 396 gtgctggtgcatttatttgtgagtatgttggggaggtcatcgatgagcttaaagttaact 455 | |||||| ||||||| || ||||||||||| ||||| || ||||| ||| |||| Sbjct: 1884 gggctggttcatttatatgcgagtatgttggtgaggttattgatgatgctaacattaatc 1943 Query: 456 tggatgacagtgaagatgattacatttttcagactgt-gtgccctggtgagaagacgctg 514 || |||| | |||||||||||| || ||||||| ||| ||| |||||||||| ||| | Sbjct: 1944 tgaatgatattgaagatgattatatatttcaga-tgtcgtgtcctggtgagaggacatta 2002 Query: 515 aaatggaattttgggcctgaactgataggcgagcaaagcac 555 |||||||||||||| |||||| ||||||| ||||||||||| Sbjct: 2003 aaatggaattttggacctgaattgataggggagcaaagcac 2043
>gb|AY634575.1| Triticum aestivum cultivar PI-94640 SET domain protein gene, complete cds Length = 2259 Score = 153 bits (77), Expect = 8e-34 Identities = 304/379 (80%), Gaps = 3/379 (0%) Strand = Plus / Plus Query: 261 tatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagccaaa 320 ||||||||||||||||| ||||||| ||| | | || || || ||||| |||| || | Sbjct: 1640 tatatgaatgtggtgaatcttgccagtgttcagttaactgccgtaacagggtgacacaga 1699 Query: 321 aagggatcaggttccactttgaggtctttaggacggtaaatcgaggctggggtcttcgct 380 | ||||| ||| | ||||||||| |||||||||| | ||||||||||||||||||||| | Sbjct: 1700 aggggattagggttcactttgagatctttaggacaggaaatcgaggctggggtcttcgtt 1759 Query: 381 gttgggagcctattcgtgctggtgcatttatttgtgagtatgttggggaggtcatcgatg 440 ||||| ||||| || ||||| ||||||| || ||||||||||| ||||| || |||| Sbjct: 1760 catgggatcctatacgggctggctcatttatctgcgagtatgttggcgaggttattgatg 1819 Query: 441 agcttaaagttaacttgga---tgacagtgaagatgattacatttttcagactgtgtgcc 497 || |||| || ||||| ||| ||||||||||||| |||||||||||||| | | Sbjct: 1820 agagtaaaaggaatttggatggtgaagatgaagatgattacctttttcagactgtgcgtc 1879 Query: 498 ctggtgagaagacgctgaaatggaattttgggcctgaactgataggcgagcaaagcacgt 557 ||||||||||||| | |||||| ||| || ||||||||||| || ||||||| ||| Sbjct: 1880 ctggtgagaagacattaaaatgggattatgtacctgaactgatgggggagcaaatcacaa 1939 Query: 558 acgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaaaagatgggaa 617 | |||||||| ||| ||||| |||||||||||||||| ||||| || ||||||| Sbjct: 1940 ataattcagctgatacttttgagccactgcccatcaagataagcgcaaagaaaatgggaa 1999 Query: 618 atgtctcacgtttcatgaa 636 | |||||||||||||||| Sbjct: 2000 acatctcacgtttcatgaa 2018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 38 gtgtgtctcgtcaatgaggttgaccatgagaaaggacctgggcagttcacctatactaat 97 |||||||| |||||||| |||||| |||||||||||| || | |||||||||| || Sbjct: 1417 gtgtgtcttgtcaatgatgttgacagtgagaaaggaccaggccttttcacctatattacc 1476 Query: 98 caggtcaaatac 109 |||||||||||| Sbjct: 1477 caggtcaaatac 1488
>gb|AY112212.1| Zea mays CL3507_2 mRNA sequence Length = 824 Score = 131 bits (66), Expect = 3e-27 Identities = 173/211 (81%) Strand = Plus / Minus Query: 428 gaggtcatcgatgagcttaaagttaacttggatgacagtgaagatgattacatttttcag 487 ||||| || |||||||| ||| |||| ||| |||| |||||||||||||||| || Sbjct: 817 gaggttattgatgagctcaaatttaatttgaatgatagtgaagatgattacannnnncaa 758 Query: 488 actgtgtgccctggtgagaagacgctgaaatggaattttgggcctgaactgataggcgag 547 ||||| |||||||| |||||||| | |||||||||| ||| |||||||||||||| || Sbjct: 757 actgtatgccctggcgagaagacattaaaatggaattatggacctgaactgataggtgaa 698 Query: 548 caaagcacgtacgtatcagctgaggaatttcagccattgcccatcaagataagtgcaaaa 607 |||||| || ||||| |||| |||||| | ||| |||| ||||||||||||| || Sbjct: 697 gtaagcacatatgtatcgcctgatgaatttgaaccactgcctgtcaagataagtgcnnaa 638 Query: 608 aagatgggaaatgtctcacgtttcatgaacc 638 || |||||||||||||| ||||||||||||| Sbjct: 637 aacatgggaaatgtctcccgtttcatgaacc 607
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 32880 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 32821 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 32820 ttcgggcaggcacatttatttgtgaatatg 32791
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 144398 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 144339 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 144338 ttcgggcaggcacatttatttgtgaatatg 144309
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 22308418 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 22308477 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 22308478 ttcgggcaggcacatttatttgtgaatatg 22308507 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 ggctggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagta 420 ||||||||||| || | ||||| ||||| |||||||| |||| ||||||||||| Sbjct: 1441364 ggctggggtctgcggtcgtgggatcctatccgtgctggcacattcatttgtgagta 1441309
>gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds Length = 2982 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 1997 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 2056 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 2057 ttcgggcaggcacatttatttgtgaatatg 2086
>dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092A08, full insert sequence Length = 3270 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 2314 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 2373 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 2374 ttcgggcaggcacatttatttgtgaatatg 2403
>dbj|AK059336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A12, full insert sequence Length = 1858 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 1022 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 1081 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 1082 ttcgggcaggcacatttatttgtgaatatg 1111
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 333 tccactttgaggtctttaggacggtaaatcgaggctggggtcttcgctgttgggagccta 392 ||||||||||||| |||| ||| | | ||||||| ||||| ||||| ||||||| || | Sbjct: 22618329 tccactttgaggtgtttaagacaggagatcgaggttggggacttcgtagttgggatccaa 22618388 Query: 393 ttcgtgctggtgcatttatttgtgagtatg 422 |||| || || ||||||||||||| |||| Sbjct: 22618389 ttcgggcaggcacatttatttgtgaatatg 22618418 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 ggctggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagta 420 ||||||||||| || | ||||| ||||| |||||||| |||| ||||||||||| Sbjct: 1439085 ggctggggtctgcggtcgtgggatcctatccgtgctggcacattcatttgtgagta 1439030
>ref|NM_117420.1| Arabidopsis thaliana SUVH9 (SU(VAR)3-9 HOMOLOG 9); histone-lysine N-methyltransferase/ zinc ion binding AT4G13460 (SUVH9) transcript variant AT4G13460.1 mRNA, complete cds Length = 1953 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 397 tgctggtgcatttatttgtgagtatgttgggg 428 ||||||||| |||||||||||||||| ||||| Sbjct: 1542 tgctggtgcttttatttgtgagtatgctgggg 1573
>ref|NM_001036548.1| Arabidopsis thaliana SUVH9 (SU(VAR)3-9 HOMOLOG 9); histone-lysine N-methyltransferase/ zinc ion binding AT4G13460 (SUVH9) transcript variant AT4G13460.2 mRNA, complete cds Length = 2690 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 397 tgctggtgcatttatttgtgagtatgttgggg 428 ||||||||| |||||||||||||||| ||||| Sbjct: 1941 tgctggtgcttttatttgtgagtatgctgggg 1972
>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36 Length = 199634 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 397 tgctggtgcatttatttgtgagtatgttgggg 428 ||||||||| |||||||||||||||| ||||| Sbjct: 111806 tgctggtgcttttatttgtgagtatgctgggg 111775
>emb|AL049656.1|ATT6G15 Arabidopsis thaliana DNA chromosome 4, BAC clone T6G15 (ESSA project) Length = 113970 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 397 tgctggtgcatttatttgtgagtatgttgggg 428 ||||||||| |||||||||||||||| ||||| Sbjct: 9598 tgctggtgcttttatttgtgagtatgctgggg 9567
>gb|AF344452.1|AF344452 Arabidopsis thaliana SUVH9 (SUVH9) mRNA, complete cds Length = 1953 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 397 tgctggtgcatttatttgtgagtatgttgggg 428 ||||||||| |||||||||||||||| ||||| Sbjct: 1542 tgctggtgcttttatttgtgagtatgctgggg 1573
>emb|AM050268.1| Lepisma saccharina mRNA for putative H3K9 methyltransferase (su(var)3-9 gene) Length = 2038 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 405 catttatttgtgagtatgttggggaggt 432 |||| ||||||||||||||||||||||| Sbjct: 1407 cattcatttgtgagtatgttggggaggt 1434
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gaggtgatctaccgtacagctc 228 |||||||||||||||||||||| Sbjct: 145673 gaggtgatctaccgtacagctc 145652
>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence Length = 142659 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 390 ctattcgtgctggtgcatttatttgtgagtatgttggggaggtcat 435 |||||||||||||| | ||||| |||||||||| ||||| ||||| Sbjct: 43378 ctattcgtgctggtacttttatatgtgagtatgcaggggaagtcat 43333
>gb|AC078986.20| Homo sapiens 3q BAC RP11-138N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166518 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 303 ggaacagagtgagccaaaaagg 324 |||||||||||||||||||||| Sbjct: 36915 ggaacagagtgagccaaaaagg 36894
>gb|AF511327.1| Sus scrofa clone UMNp507 microsatellite sequence Length = 253 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 atttcagccattgcccatcaa 594 ||||||||||||||||||||| Sbjct: 218 atttcagccattgcccatcaa 238
>gb|AC105164.12| Mus musculus chromosome 6, clone RP24-296I7, complete sequence Length = 178877 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gttgccagagtgtttgccta 169 |||||||||||||||||||| Sbjct: 175954 gttgccagagtgtttgccta 175973
>gb|AC005409.1| Homo sapiens chromosome 12 clone 14951, complete sequence Length = 177364 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gtgaagatgattacattttt 484 |||||||||||||||||||| Sbjct: 120182 gtgaagatgattacattttt 120163
>gb|AC117612.9| Mus musculus chromosome 19, clone RP23-103G8, complete sequence Length = 186038 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tgtttgcctacctggtgatg 179 |||||||||||||||||||| Sbjct: 3611 tgtttgcctacctggtgatg 3630
>gb|AC155732.21| Mus musculus 6 BAC RP24-235I13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165822 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gttgccagagtgtttgccta 169 |||||||||||||||||||| Sbjct: 146235 gttgccagagtgtttgccta 146216
>gb|AC114801.4| Homo sapiens BAC clone RP11-777B9 from 4, complete sequence Length = 69745 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 agtgaagatgattacatttt 483 |||||||||||||||||||| Sbjct: 51389 agtgaagatgattacatttt 51408
>gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, complete sequence Length = 156701 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tgtttgcctacctggtgatg 179 |||||||||||||||||||| Sbjct: 110928 tgtttgcctacctggtgatg 110947
>emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chromosome 10 Contains a pseudogene similar to part of lactate dehydrogenase A (LDH1) (LDHD), two novel genes, the NANOS1 gene for nanos homolog 1 (Drosophila) and one CpG island, complete sequence Length = 119104 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 taatatatgaatgtggtgaa 277 |||||||||||||||||||| Sbjct: 101333 taatatatgaatgtggtgaa 101352
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 ggctggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagta 420 ||||||||||| || | ||||| ||||| |||||||| |||| ||||||||||| Sbjct: 60159 ggctggggtctgcggtcgtgggatcctatccgtgctggcacattcatttgtgagta 60104
>emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in linkage group 21, complete sequence Length = 129478 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tacatttttcagactgtgtg 495 |||||||||||||||||||| Sbjct: 5213 tacatttttcagactgtgtg 5194
>gb|AC063950.37| Homo sapiens 12 BAC RP11-511H9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174231 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gtgaagatgattacattttt 484 |||||||||||||||||||| Sbjct: 113853 gtgaagatgattacattttt 113834
>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a novel gene, a non-POU domain containing octamer-binding protein (Nono) pseudogene, a Sin3-associated polypeptide 18 (Sap18) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 209175 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 tggttgccagagtgtttgcctacc 171 |||||||||||||| ||||||||| Sbjct: 155936 tggttgccagagtgcttgcctacc 155913
>gb|AC158681.3| Mus musculus 6 BAC RP23-338E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202460 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gttgccagagtgtttgccta 169 |||||||||||||||||||| Sbjct: 14134 gttgccagagtgtttgccta 14115
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 catttatttgtgagtatgtt 424 |||||||||||||||||||| Sbjct: 4266194 catttatttgtgagtatgtt 4266175
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 ggctggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagta 420 |||||||| || || | |||||| ||||| |||||||| |||| ||||||||||| Sbjct: 1351376 ggctggggcctgcggtcttgggatcctatccgtgctggcacattcatttgtgagta 1351321
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09, complete sequence Length = 127117 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 catttatttgtgagtatgtt 424 |||||||||||||||||||| Sbjct: 14062 catttatttgtgagtatgtt 14043
>gb|AC084441.1|AC084441 Caenorhabditis briggsae cosmid CB006B21, complete sequence Length = 70807 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ttggatgacagtgaagatga 474 |||||||||||||||||||| Sbjct: 25263 ttggatgacagtgaagatga 25282
>gb|AF042861.1|AF042861 Treponema denticola OppA (oppA), putative OppB (oppB), putative OppC (oppC), putative OppD (oppD), and putative OppF (oppF) genes, complete cds Length = 6561 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 atctgggactgaatcgatac 35 |||||||||||||||||||| Sbjct: 5722 atctgggactgaatcgatac 5703
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 ggctggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagta 420 |||||||| || || | |||||| ||||| |||||||| |||| ||||||||||| Sbjct: 1351376 ggctggggcctgcggtcttgggatcctatccgtgctggcacattcatttgtgagta 1351321
>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18, complete sequence Length = 132854 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 catttatttgtgagtatgtt 424 |||||||||||||||||||| Sbjct: 109258 catttatttgtgagtatgtt 109239
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 365 ggctggggtcttcgctgttgggagcctattcgtgctggtgcatttatttgtgagta 420 |||||||| || || | |||||| ||||| |||||||| |||| ||||||||||| Sbjct: 77793 ggctggggcctgcggtcttgggatcctatccgtgctggcacattcatttgtgagta 77848
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 atctgggactgaatcgatac 35 |||||||||||||||||||| Sbjct: 1095037 atctgggactgaatcgatac 1095056
>gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, complete sequence Length = 183220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gttgccagagtgtttgccta 169 |||||||||||||||||||| Sbjct: 177947 gttgccagagtgtttgccta 177928
>gb|AC172750.1| Mus musculus BAC clone RP24-177J9 from chromosome 7, complete sequence Length = 145766 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tatttgtgagtatgttgggg 428 |||||||||||||||||||| Sbjct: 71477 tatttgtgagtatgttgggg 71496
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence Length = 250028 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gttgccagagtgtttgccta 169 |||||||||||||||||||| Sbjct: 24628 gttgccagagtgtttgccta 24609
>gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosome 7, complete sequence Length = 172485 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tatttgtgagtatgttgggg 428 |||||||||||||||||||| Sbjct: 10676 tatttgtgagtatgttgggg 10695
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 gatgacagtgaagatgatta 477 |||||||||||||||||||| Sbjct: 1331132 gatgacagtgaagatgatta 1331151 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,159,366 Number of Sequences: 3902068 Number of extensions: 5159366 Number of successful extensions: 92219 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91772 Number of HSP's gapped (non-prelim): 425 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
