ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39h22 |
|---|---|
| Clone Library Name | barley_pub |
>BIGA_SALTY (P25927) Putative surface-exposed virulence protein bigA precursor| Length = 1953 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +1 Query: 82 GIDHTPPMEGGHPTPPMKGGHPTLPMAEGDHTLLP 186 G D TPP +GG+ TPP GG+ T P GD + P Sbjct: 104 GGDVTPPDDGGNVTPPDDGGNVTPPDDGGDDNVTP 138
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 34.3 bits (77), Expect = 0.37 Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 20/95 (21%) Frame = +1 Query: 91 HTPPMEGGHPT-----PPMKGGHPTL----PMAEGDHTLLPTGRSLPTTGVDP------- 222 H PP G HP PP HP P A G H P P GV P Sbjct: 376 HPPPSAGVHPQAPGVHPPAPAVHPQAPGVHPPAPGIHPQAPGVHPQPPPGVHPAAPGVHP 435 Query: 223 ----THPTTGVTHPAMVIATVQDPHTVTEGGGHAP 315 HP+ HPA + ++ P ++G G+ P Sbjct: 436 QPPGVHPSNPGVHPAPMPPMLRPP-LPSDGPGNMP 469 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 14/66 (21%) Frame = +1 Query: 97 PPMEGGHPTPPM---------KGGHPTL-PMAEGDHTLLPTGRSLPTTGVDP----THPT 234 PP GG P PPM G P + P A G H P PT+GV P HP Sbjct: 243 PPPPGGLPLPPMPPTGPAPSGPPGPPQMPPPAPGVHPPAPVVHP-PTSGVHPPAPGVHPP 301 Query: 235 TGVTHP 252 V HP Sbjct: 302 APVVHP 307
>PTPRG_HUMAN (P23470) Receptor-type tyrosine-protein phosphatase gamma precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) Length = 1445 Score = 34.3 bits (77), Expect = 0.37 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = +1 Query: 118 PTPPMKGGHPTLPMAEGDHTLLPT----GRSLPTTGVDPTHPTTGVTHPAMVIATVQDPH 285 P +GGH T+P E DHT +PT GR G+DP ++ + Q P Sbjct: 630 PNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPD-----------MVTSTQVPP 678 Query: 286 TVTE 297 T TE Sbjct: 679 TATE 682
>EWG_DROME (Q24312) DNA-binding protein Ewg (Protein erect wing)| Length = 733 Score = 33.9 bits (76), Expect = 0.48 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = +1 Query: 181 LPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQ 360 LP G + GV H G AT+Q ++T+ GH MTV T G I Sbjct: 569 LPDGTTAQVQGVATLHQGEGG-------ATIQTVQSLTDVNGHENMTVDLTETQDGQIYI 621 Query: 361 GTEDG 375 TEDG Sbjct: 622 TTEDG 626
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 33.1 bits (74), Expect = 0.83 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 1/60 (1%) Frame = +1 Query: 64 HTLVMTGIDHTPPMEGGHP-TPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTG 240 H + I H PP G HP PP G HP P G P G P HP G Sbjct: 317 HHRISVNIIHRPPPHGHHPHGPPPHGHHPHGPPPHGH----------PPHGPPPRHPPHG 366
>DEAF1_MOUSE (Q9Z1T5) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 566 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 6/69 (8%) Frame = +1 Query: 97 PPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGR------SLPTTGVDPTHPTTGVTHPAM 258 PP GHP P G + +A LPT SLP V P+ PT V+ P + Sbjct: 384 PPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPSTPTKAVS-PTV 442 Query: 259 VIATVQDPH 285 V H Sbjct: 443 VSGLEMSEH 451
>DEAF1_RAT (O88450) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) Length = 565 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 6/69 (8%) Frame = +1 Query: 97 PPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGR------SLPTTGVDPTHPTTGVTHPAM 258 PP GHP P G + +A LPT SLP V P+ PT V+ P + Sbjct: 383 PPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPSTPTKAVS-PTV 441 Query: 259 VIATVQDPH 285 V H Sbjct: 442 VSGLEMSEH 450
>ALL1_ARTVU (Q84ZX5) Major pollen allergen Art v 1 precursor| Length = 132 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = +1 Query: 97 PPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTT 237 PP GG P+PP GG P P G S P G P P+T Sbjct: 94 PPAAGGSPSPPADGGSPPPP---------ADGGSPPVDGGSPPPPST 131
>DOS_MOUSE (Q66L44) Protein Dos (Downstream of Stk11 protein) (Fragment)| Length = 552 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = +1 Query: 82 GIDHTPPMEGGHPTPPMKGGHPTLPMAEGDHT-LLPTGRSLPTTGVDPTHP 231 G H+ P TPP P+ GD P GR+LP TG DP+ P Sbjct: 434 GRQHSDPGGARAATPPGVARPTRAPLRRGDSVDCPPEGRALPITGDDPSIP 484
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 32.3 bits (72), Expect = 1.4 Identities = 31/122 (25%), Positives = 43/122 (35%) Frame = +1 Query: 76 MTGIDHTPPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHPA 255 M + HT P G P P P+ P++ T PT S+P+ + PT A Sbjct: 866 MPSLQHTTP-PGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQA 924 Query: 256 MVIATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQGTEDGVTLAAYHHAGATPVAAPWRQ 435 V Q P V P + Q T A GT A+ + TP + + Sbjct: 925 QVTPQPQTP--VQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAE 982 Query: 436 KN 441 N Sbjct: 983 TN 984
>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 464 Score = 32.3 bits (72), Expect = 1.4 Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 21/96 (21%) Frame = +1 Query: 91 HTPPMEGGHPTPPMKGGHPTLPM-----------AEGDHTLLPTGRSLP------TTGVD 219 H PP G HP P G HP P A G H P P GV Sbjct: 365 HPPPSAGVHPQAP--GVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVH 422 Query: 220 P----THPTTGVTHPAMVIATVQDPHTVTEGGGHAP 315 P HP+ HP + + P +EG G+ P Sbjct: 423 PQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP 458
>DHPS2_MYCTU (P64139) Dihydropteroate synthase 2 (EC 2.5.1.15) (DHPS 2)| (Dihydropteroate pyrophosphorylase 2) Length = 318 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +1 Query: 94 TPPMEGGHPTPPMKGGHPTLPMAEGDHTL 180 TPP G TPP GH T P G TL Sbjct: 4 TPPASAGRSTPPALAGHSTPPALAGHSTL 32
>DHPS2_MYCBO (P64140) Dihydropteroate synthase 2 (EC 2.5.1.15) (DHPS 2)| (Dihydropteroate pyrophosphorylase 2) Length = 318 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +1 Query: 94 TPPMEGGHPTPPMKGGHPTLPMAEGDHTL 180 TPP G TPP GH T P G TL Sbjct: 4 TPPASAGRSTPPALAGHSTPPALAGHSTL 32
>LEF1_HUMAN (Q9UJU2) Lymphoid enhancer-binding factor 1 (LEF-1) (T| cell-specific transcription factor 1-alpha) (TCF1-alpha) Length = 399 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Frame = +1 Query: 112 GHPTPPMKG-GHPTLPMAEGDHTLLPTGRSLPTTGVDPTHP---------TTGVTHPAMV 261 G TPP+ G P P+ G P+ S+ T+ +H TTG+ HPA+V Sbjct: 205 GQITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPHPAIV 264 Query: 262 IATVQDPHTVTE 297 V+ H T+ Sbjct: 265 TPQVKQEHPHTD 276
>DAF_CAVPO (Q60401) Complement decay-accelerating factor precursor (CD55| antigen) [Contains: Complement decay-accelerating factor, GPI-anchored isoform] Length = 507 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 4/70 (5%) Frame = +1 Query: 124 PPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPT----TGVTHPAMVIATVQDPHTV 291 PP K PT A G T LPT + P PT T V P + T Q TV Sbjct: 291 PPQK---PTTTSAPGTTTTLPTQKPTTVNTAGPEVPTTQRSTTVNVPGTKVPTTQRSTTV 347 Query: 292 TEGGGHAPMT 321 G P T Sbjct: 348 NVPGTEVPTT 357
>BSL2_ARATH (Q9SJF0) Serine/threonine-protein phosphatase BSL2 (EC 3.1.3.16)| (BSU1-like protein 2) Length = 1088 Score = 31.2 bits (69), Expect = 3.1 Identities = 28/104 (26%), Positives = 39/104 (37%) Frame = +1 Query: 103 MEGGHPTPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDP 282 ++GG PM+ P D + P G S+PT +P T A V+ Q P Sbjct: 20 LDGGQSPSPMER---ETPQQMNDQSPPPEGGSVPTPPPSDPNPATSQQQAAAVVGQEQQP 76 Query: 283 HTVTEGGGHAPMTVMFQHTTAGAILQGTEDGVTLAAYHHAGATP 414 V G AP ++ A++ EDG H A P Sbjct: 77 ALVV-GPRCAP-----TYSVVDAMMDKKEDGPGPRCGHTLTAVP 114
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 31.2 bits (69), Expect = 3.1 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +1 Query: 82 GIDHTPPMEGGHP-TPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHPAM 258 G DH + GG P P G HP A G H P+ + P+ G P+H +H A+ Sbjct: 27 GHDHASHVPGGRPGAHPSHGAHP----AHGAH---PSHGAHPSHGAHPSH-GAHPSHGAL 78 Query: 259 VIATVQDPHTVTEGGGHAPMT 321 Q PH+ G GH T Sbjct: 79 PSHGGQVPHS---GWGHGRAT 96
>RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-rich 5| (RNA-binding protein srp-3) (CeSC35-2) Length = 208 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +3 Query: 438 ESRSCSPQKGYAESKASRSRSPAIAKRRSRESYAHSPQ 551 ESRS SP++ + +ASRSRSP AK RSR P+ Sbjct: 137 ESRSPSPKRDL-KREASRSRSPLPAKDRSRTRSGSPPK 173
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 8/28 (28%) Frame = +1 Query: 97 PPMEGGHPTPPM--------KGGHPTLP 156 PP +GGHP PP +GGHP P Sbjct: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPP 121 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 7/40 (17%) Frame = +1 Query: 97 PPMEGGHPTPPMKGGHPTLPMA-------EGDHTLLPTGR 195 PP +G PP +GGHP P +G H P GR Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGR 124
>METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 399 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 385 AAYHHAGATPVAAPWRQKNQGAVLRRK 465 AAY H G T V PW Q ++ +LR++ Sbjct: 372 AAYGHFGRTDVELPWEQTDKAEILRQQ 398
>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)| Length = 501 Score = 30.4 bits (67), Expect = 5.4 Identities = 32/104 (30%), Positives = 36/104 (34%) Frame = +1 Query: 73 VMTGIDHTPPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHP 252 V GI PP G P PP +GG P P TGRS P P G P Sbjct: 344 VPLGIAPPPPTPRG-PPPPGRGGPPPPPPP-------ATGRSGPL-----PPPPPGAGGP 390 Query: 253 AMVIATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQGTEDGVTL 384 M P + G G AP + AG + G G L Sbjct: 391 PMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRGALL 434
>LEF1_RAT (Q9QXN1) Lymphoid enhancer-binding factor 1 (LEF-1)| Length = 397 Score = 30.4 bits (67), Expect = 5.4 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 10/72 (13%) Frame = +1 Query: 112 GHPTPPMKG-GHPTLPMAEGDHTLLPTGRSLPTTGVDPTHP---------TTGVTHPAMV 261 G TPP+ G P P+ G P+ S T+ +H TTG+ HPA+V Sbjct: 203 GQITPPLGWQGQPVYPITGGFRQAYPSSLSGDTSMSRFSHHMIPGPPGPHTTGIPHPAIV 262 Query: 262 IATVQDPHTVTE 297 V+ H T+ Sbjct: 263 TPQVKQEHPHTD 274
>OR4DB_HUMAN (Q8NGI4) Olfactory receptor 4D11| Length = 311 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -1 Query: 598 CLMRLSAPWRRTSSMNCGLC-A*LSLERLFAIAGDLLRDALLSAYPFCGEQLLDS 437 C M +S P + M+ G C A +S + +++ +LL PFCG +LD+ Sbjct: 122 CYMAISKPLHYVTIMSRGQCTALISASWMGGFVHSIVQISLLLPLPFCGPNVLDT 176
>AMBN_BOVIN (Q9XSX7) Ameloblastin precursor| Length = 392 Score = 30.0 bits (66), Expect = 7.0 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = +1 Query: 103 MEGGHPTPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDP 282 ++ G P PP+ GHP L AEG + V P+ P M A +QDP Sbjct: 124 VQKGVPQPPIYQGHPPLQQAEG---------PMVEQQVAPSEKPPTTELPGMDFADLQDP 174
>KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-associated| protein 10.10) (High sulfur keratin-associated protein 10.10) (Keratin-associated protein 18-10) (Keratin-associated protein 18.10) Length = 251 Score = 30.0 bits (66), Expect = 7.0 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 9/127 (7%) Frame = -2 Query: 513 SQSQVTCC-AMPCFQHILSAENSSLILLTPGSSYGSSSCVVIRCESNSVFCSLENSACC- 340 S Q TCC + PC Q S + P S S+SC C+ +S + ++CC Sbjct: 130 SSCQPTCCTSSPCQQACCVPVCSKSVCYVPVCSGASTSC----CQQSSCQPACCTASCCR 185 Query: 339 -----SMLKHNGHGSMTSAFCNCMGILNGGDDHSGVSDACRRVSRIYA--CGRETPTCRK 181 S+L H + + C C+ + + G S +C R + + C P C + Sbjct: 186 PSSSVSLLCH----PVCKSTC-CVPVPSCGASASSCQPSCCRTASCVSLLC---RPVCSR 237 Query: 180 ESMISFC 160 + S C Sbjct: 238 PACYSLC 244
>ZP1_RAT (O54766) Zona pellucida sperm-binding protein 1 precursor (Zona| pellucida glycoprotein 1) (Zp-1) Length = 617 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/64 (31%), Positives = 25/64 (39%) Frame = +1 Query: 148 TLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDPHTVTEGGGHAPMTVM 327 TL + DH L P P T P P T HP HT+ G GH +T + Sbjct: 125 TLICPKPDHILTPESYLAPPTTPQPFIPHTFALHPI-------SGHTLA-GSGHTGLTTL 176 Query: 328 FQHT 339 + T Sbjct: 177 YPET 180
>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130| (Serine-arginine-rich splicing regulatory protein 130) (SRrp130) (SR-rich protein) (SR-related protein) Length = 805 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = +3 Query: 441 SRSCSPQKGYAESKASRSRSPAIAKRRSRESYAHSPQFMLE 563 SRS SP++ + + SRSRSP I RRSR S ++S + +E Sbjct: 547 SRSSSPKR---KKRHSRSRSPTIKARRSR-SRSYSRRIKIE 583
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Frame = +1 Query: 79 TGIDHTPPMEGG----HPTPPMKG--GHPTLPMAEGDHTLLPTGRSLP-TTGVDPTHPTT 237 T I PP+ GG P PP+ G G P P G L P P G+ P P Sbjct: 669 TAIPPPPPLPGGTGIPPPPPPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPGIPPPPPGM 728 Query: 238 GVTHP 252 GV P Sbjct: 729 GVPPP 733
>DEAF1_PANTR (O77562) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 565 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 6/61 (9%) Frame = +1 Query: 97 PPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGR------SLPTTGVDPTHPTTGVTHPAM 258 PP HP P G + +A LPT SLP V P PT PA+ Sbjct: 383 PPCRASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAP-PAL 441 Query: 259 V 261 V Sbjct: 442 V 442
>DEAF1_HUMAN (O75398) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5) Length = 565 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 6/61 (9%) Frame = +1 Query: 97 PPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGR------SLPTTGVDPTHPTTGVTHPAM 258 PP HP P G + +A LPT SLP V P PT PA+ Sbjct: 383 PPCRASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAP-PAL 441 Query: 259 V 261 V Sbjct: 442 V 442
>AMBN_PIG (Q28989) Ameloblastin precursor (Sheathlin)| Length = 421 Score = 29.6 bits (65), Expect = 9.1 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = +1 Query: 73 VMTGIDHTPPMEGGHPTPPMKGGHPTLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHP 252 V+T I + P++ G P PP+ GHP L EG + V P+ P Sbjct: 131 VVTSIQN--PVQKGVPQPPIYQGHPPLQQVEG---------PMVQQQVAPSEKPPEAELP 179 Query: 253 AMVIATVQDP 282 + A QDP Sbjct: 180 GLDFADPQDP 189
>METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1206 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 265 ATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQGTEDGVTLAAYHHAG 405 A + +T+ G H P+ V T G +L G+E G LAA G Sbjct: 179 AVLGSRRAMTQAGRHIPVFVHVTVETTGTMLLGSEIGAALAAVEPLG 225
>NOTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1 precursor| Length = 2437 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +2 Query: 479 QGIAQQVTCDCEEAF*RKLCAQPAVHARGPSPGSAQPHQAPDGLQSALMTLD--VCK-QC 649 QG V CDC F +LC P HA SP +G +L+TLD C+ Q Sbjct: 78 QGNEVGVKCDCVLGFSDRLCLTPVNHACMNSP-------CRNGGTCSLLTLDTFTCRCQP 130 Query: 650 GW 655 GW Sbjct: 131 GW 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,212,359 Number of Sequences: 219361 Number of extensions: 1754680 Number of successful extensions: 7584 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6793 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7520 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
