ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39h15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 735 bits (371), Expect = 0.0 Identities = 545/603 (90%) Strand = Plus / Plus Query: 17 tacttgttgataaccgtgaaagagaatctgggagcatgtacactgattgggacatcttgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | Sbjct: 575 tactagttgataaccgtgaaagagaatcagggagcatgtacactgactgggacatcctcc 634 Query: 77 ctcctcgtaaaatcaaggatgttggtgccaaaaagcctaaggattgggatgacagagagt 136 ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 635 ctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacagagaat 694 Query: 137 atattgaggatcccgatgcggttaaacctgagggctatgattctattccaagagagattc 196 ||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||||| Sbjct: 695 atattgaggatccagatgcagttaaaccagagggctatgattctattccaaaggagattc 754 Query: 197 ctgacccaaaggataagaagcccgacacgtgggacgatgatgatgatggcatatggaaac 256 |||| ||||| || || ||||| ||||||||||| ||||||||||||||||||||||| | Sbjct: 755 ctgatccaaaagacaaaaagcctgacacgtgggatgatgatgatgatggcatatggaagc 814 Query: 257 ctaggaggataccgaatccagcatacaaaggacaatggaagcgcaagaaaattaagaacc 316 |||| | |||||| |||||||||||||| |||| |||||||||||||||||| ||||| | Sbjct: 815 ctagaatgataccaaatccagcatacaagggaccatggaagcgcaagaaaatcaagaatc 874 Query: 317 ctaactacaagggtaaatggaagatcccatggattgataatccagagtttgaggatgatc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 ctaactacaagggtaaatggaagatcccatggattgataatccagagtttgaggatgatc 934 Query: 377 cagatttatatgtactgaaacctctgaagtatattggaattgaagtttggcaggtaaaag 436 |||| ||||||| |||||||| |||| |||||||||||||| |||||||||||||| | Sbjct: 935 cagacctatatgtgctgaaacccttgaaatatattggaattgaggtttggcaggtaaagg 994 Query: 437 ccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgcaaaacaggttg 496 | ||||| ||||||||||||||||||||||| || || ||||||||||||| | | | || Sbjct: 995 ctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgcaagaaaagctg 1054 Query: 497 ccgatgaaacgtggggtgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaa 556 | || ||||| ||||||||||| | |||||| ||||| |||||||||||||||||||| | Sbjct: 1055 ctgaggaaacatggggtgcaaacagggaggccgaaaaagaggcttttgaagaagctgaga 1114 Query: 557 aggagaggaaagctagagaagataaggaagctcaacaagcaagggaggaaggagagcgac 616 ||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1115 aggagaggaaagctagagaggataaggaagctgaacgagcaagggaggaaggagagcgac 1174 Query: 617 gga 619 ||| Sbjct: 1175 gga 1177
>gb|AY105822.1| Zea mays PCO122996 mRNA sequence Length = 1660 Score = 593 bits (299), Expect = e-166 Identities = 518/591 (87%) Strand = Plus / Plus Query: 1 gatgcatcttatagtttacttgttgataaccgtgaaagagaatctgggagcatgtacact 60 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 gatgcatcttatagcctgcttgttgataaccgtgaaagagaatctgggagcatgtacact 688 Query: 61 gattgggacatcttgcctcctcgtaaaatcaaggatgttggtgccaaaaagcctaaggat 120 |||||||| || | |||||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 689 gattgggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggat 748 Query: 121 tgggatgacagagagtatattgaggatcccgatgcggttaaacctgagggctatgattct 180 |||||||||||||| |||||||| ||||| |||| ||||| || ||||||||||||||| Sbjct: 749 tgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattct 808 Query: 181 attccaagagagattcctgacccaaaggataagaagcccgacacgtgggacgatgatgat 240 || |||| | |||||||||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct: 809 atcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgag 868 Query: 241 gatggcatatggaaacctaggaggataccgaatccagcatacaaaggacaatggaagcgc 300 ||||| |||||||| || || | | || | |||||||||||||| |||| ||||| ||| Sbjct: 869 gatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaacgc 928 Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| |||||| || ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 929 aagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatcca 988 Query: 361 gagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattgaa 420 ||||||||||||||||||||| | ||||| ||||| ||| |||||||||||||||||||| Sbjct: 989 gagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattgaa 1048 Query: 421 gtttggcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaa 480 ||||||||||||||||| ||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 1049 gtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgag 1108 Query: 481 tatgcaaaacaggttgccgatgaaacgtggggtgcaaataaggaggctgaaaaggaggct 540 ||||||| | |||||| || ||||| ||||||||||||| ||||||||||||||| ||| Sbjct: 1109 tatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaaggaagct 1168 Query: 541 tttgaagaagctgaaaaggagaggaaagctagagaagataaggaagctcaa 591 |||||||||||||||||||||||||||||||| || |||| ||||| |||| Sbjct: 1169 tttgaagaagctgaaaaggagaggaaagctagggaggatagggaaggtcaa 1219
>dbj|AK060834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C08, full insert sequence Length = 1481 Score = 440 bits (222), Expect = e-120 Identities = 489/578 (84%) Strand = Plus / Plus Query: 1 gatgcatcttatagtttacttgttgataaccgtgaaagagaatctgggagcatgtacact 60 ||||| ||||||||| |||||||||||||||| || ||||||| ||| || ||||||||| Sbjct: 381 gatgcctcttatagtctacttgttgataaccgggagagagaatttggtagtatgtacact 440 Query: 61 gattgggacatcttgcctcctcgtaaaatcaaggatgttggtgccaaaaagcctaaggat 120 || ||||||||| | |||||||| || ||||| || | ||| || ||||| || ||| Sbjct: 441 gactgggacatcctccctcctcgcaagatcaaagaatctaatgcgaagaagccaaaagat 500 Query: 121 tgggatgacagagagtatattgaggatcccgatgcggttaaacctgagggctatgattct 180 ||||||||||| || |||||||| ||||| |||| |||||||| ||||||||||| ||| Sbjct: 501 tgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgactct 560 Query: 181 attccaagagagattcctgacccaaaggataagaagcccgacacgtgggacgatgatgat 240 ||||| | |||||||||||| |||||||| || ||||| || | ||||| ||||||||| Sbjct: 561 attcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgatgat 620 Query: 241 gatggcatatggaaacctaggaggataccgaatccagcatacaaaggacaatggaagcgc 300 ||||| ||||||| ||||| | |||||||||||||| |||||| |||| ||||| ||| Sbjct: 621 gatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaacgc 680 Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 681 aagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataatcca 740 Query: 361 gagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattgaa 420 || |||||||| || ||||| ||||||| ||||||||| || ||||| | |||||||| Sbjct: 741 gaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattgag 800 Query: 421 gtttggcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaa 480 ||||||||||| ||||| ||||| |||||||||||||| | ||||| || |||||||| Sbjct: 801 gtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggag 860 Query: 481 tatgcaaaacaggttgccgatgaaacgtggggtgcaaataaggaggctgaaaaggaggct 540 ||||||| | |||| ||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 861 tatgcaagaagtgttgtcgatgaagttagggctgcaaataaagaggctgaaaaggaggcc 920 Query: 541 tttgaagaagctgaaaaggagaggaaagctagagaaga 578 || || || ||||||||| |||||| ||||||||||| Sbjct: 921 ttcgaggaggctgaaaagcggaggaaggctagagaaga 958
>ref|XM_475503.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 Score = 432 bits (218), Expect = e-118 Identities = 488/578 (84%) Strand = Plus / Plus Query: 1 gatgcatcttatagtttacttgttgataaccgtgaaagagaatctgggagcatgtacact 60 ||||| ||||||||| |||||||||||||||| || ||||||| ||| || ||||||||| Sbjct: 559 gatgcctcttatagtctacttgttgataaccgggagagagaatttggtagtatgtacact 618 Query: 61 gattgggacatcttgcctcctcgtaaaatcaaggatgttggtgccaaaaagcctaaggat 120 || ||||||||| | |||||||| || ||||| || | ||| || ||||| || ||| Sbjct: 619 gactgggacatcctccctcctcgcaagatcaaagaatctaatgcgaagaagccaaaagat 678 Query: 121 tgggatgacagagagtatattgaggatcccgatgcggttaaacctgagggctatgattct 180 ||||||||||| || |||||||| ||||| |||| |||||||| ||||||||||| ||| Sbjct: 679 tgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgactct 738 Query: 181 attccaagagagattcctgacccaaaggataagaagcccgacacgtgggacgatgatgat 240 ||||| | |||||||||||| |||||||| || ||||| || | ||||| ||||||||| Sbjct: 739 attcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgatgat 798 Query: 241 gatggcatatggaaacctaggaggataccgaatccagcatacaaaggacaatggaagcgc 300 ||||| ||||||| ||||| | |||||||||||||| |||||| |||| ||||| ||| Sbjct: 799 gatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaacgc 858 Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 859 aagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataatcca 918 Query: 361 gagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattgaa 420 || |||||||| || ||||| ||||||| ||||||||| || ||||| | |||||||| Sbjct: 919 gaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattgag 978 Query: 421 gtttggcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaa 480 ||||||||||| ||||| ||||| |||||||||||||| | ||||| || |||||||| Sbjct: 979 gtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggag 1038 Query: 481 tatgcaaaacaggttgccgatgaaacgtggggtgcaaataaggaggctgaaaaggaggct 540 ||||||| | |||| |||||| ||| ||||||||| ||||||||||||||||| Sbjct: 1039 tatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggctgaaaaggaggcc 1098 Query: 541 tttgaagaagctgaaaaggagaggaaagctagagaaga 578 || || || ||||||||| |||||| ||||||||||| Sbjct: 1099 ttcgaggaggctgaaaagcggaggaaggctagagaaga 1136
>dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B02, full insert sequence Length = 1784 Score = 385 bits (194), Expect = e-103 Identities = 287/318 (90%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1000 agaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattggtaatccag 1059 Query: 362 agtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattgaag 421 ||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||| | Sbjct: 1060 agtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattgagg 1119 Query: 422 tttggcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaat 481 ||||||||||||| || ||||| ||||||||||||||||||||||| || || ||||||| Sbjct: 1120 tttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaat 1179 Query: 482 atgcaaaacaggttgccgatgaaacgtggggtgcaaataaggaggctgaaaaggaggctt 541 |||||| | | | ||| || ||||| ||||||||||| | |||||| ||||| ||||||| Sbjct: 1180 atgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccgaaaaagaggctt 1239 Query: 542 ttgaagaagctgaaaaggagaggaaagctagagaagataaggaagctcaacaagcaaggg 601 ||||||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||| Sbjct: 1240 ttgaagaagctgagaaggagaggaaagctagagaggataaggaagctgaacgagcaaggg 1299 Query: 602 aggaaggagagcgacgga 619 |||||||||||||||||| Sbjct: 1300 aggaaggagagcgacgga 1317 Score = 347 bits (175), Expect = 3e-92 Identities = 259/287 (90%) Strand = Plus / Plus Query: 17 tacttgttgataaccgtgaaagagaatctgggagcatgtacactgattgggacatcttgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | Sbjct: 630 tactagttgataaccgtgaaagagaatcagggagcatgtacactgactgggacatcctcc 689 Query: 77 ctcctcgtaaaatcaaggatgttggtgccaaaaagcctaaggattgggatgacagagagt 136 ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 690 ctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacagagaat 749 Query: 137 atattgaggatcccgatgcggttaaacctgagggctatgattctattccaagagagattc 196 ||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||||| Sbjct: 750 atattgaggatccagatgcagttaaaccagagggctatgattctattccaaaggagattc 809 Query: 197 ctgacccaaaggataagaagcccgacacgtgggacgatgatgatgatggcatatggaaac 256 |||| ||||| || || ||||| ||||||||||| ||||||||||||||||||||||| | Sbjct: 810 ctgatccaaaagacaaaaagcctgacacgtgggatgatgatgatgatggcatatggaagc 869 Query: 257 ctaggaggataccgaatccagcatacaaaggacaatggaagcgcaag 303 |||| | |||||| |||||||||||||| |||| ||||||||||||| Sbjct: 870 ctagaatgataccaaatccagcatacaagggaccatggaagcgcaag 916
>gb|BT017842.1| Zea mays clone EL01N0510B01.c mRNA sequence Length = 673 Score = 228 bits (115), Expect = 2e-56 Identities = 238/279 (85%) Strand = Plus / Plus Query: 309 taagaaccctaactacaagggtaaatggaagatcccatggattgataatccagagtttga 368 |||||| ||||||||||| || |||||||||| ||| ||||||| |||||||||||||| Sbjct: 1 taagaatcctaactacaaaggaaaatggaagaccccttggattgtcaatccagagtttga 60 Query: 369 ggatgatccagatttatatgtactgaaacctctgaagtatattggaattgaagtttggca 428 |||||| ||||| ||||||| ||||||||| || ||||| | || |||||||| ||||| Sbjct: 61 ggatgacccagacctatatgttctgaaacctttgcagtatgtggggattgaagtatggca 120 Query: 429 ggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgcaaa 488 ||| ||||| ||||| |||||||||||||| | |||||||||||||| || ||||||| Sbjct: 121 ggtcaaagctggttcagtttttgacaacattttgatttgcgatgacccagactatgcaag 180 Query: 489 acaggttgccgatgaaacgtggggtgcaaataaggaggctgaaaaggaggcttttgaaga 548 ||| |||| |||||||| | | ||||||||||||||||||||||||||| ||||||| Sbjct: 181 acatgttgtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcctttgaagg 240 Query: 549 agctgaaaaggagaggaaagctagagaagataaggaagc 587 |||||||| ||||||| ||||||||||| ||||||| Sbjct: 241 agctgaaagaaagaggaaggctagagaagaagaggaagc 279
>gb|AY336743.1| Brassica rapa subsp. pekinensis calreticulin 3 mRNA, partial cds Length = 1142 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||||||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 859 aagaaaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 918 Query: 361 gagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattgaa 420 |||||||| |||||||||||| | ||||| ||||| ||| | || || || || |||||| Sbjct: 919 gagtttgaagatgatccagatctttatgttctgaagcctataaaatacataggcattgaa 978 Query: 421 gtttggcaggt 431 || |||||||| Sbjct: 979 gtatggcaggt 989 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 117 ggattgggatgacagagagtatattgaggatcccgatgcggttaaacctgagggctatga 176 ||||||||||||||| || ||||| || || || |||| || ||||||||||| ||||| Sbjct: 675 ggattgggatgacagggaatatatagatgaccctgatgatgtcaaacctgagggttatga 734 Query: 177 ttctattcc 185 ||| ||||| Sbjct: 735 ttcgattcc 743
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 215 agcccgacacgtgggacgatgatgatgatggcatatggaaacctaggaggataccgaatc 274 |||| ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||| Sbjct: 38925660 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 38925601 Query: 275 cagcatacaaaggacaatggaagcgcaag 303 |||||||||| |||| ||||||||||||| Sbjct: 38925600 cagcatacaagggaccatggaagcgcaag 38925572 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 17 tacttgttgataaccgtgaaagagaatctgggagcatgtacactgattgggacatcttgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | Sbjct: 38926294 tactagttgataaccgtgaaagagaatcagggagcatgtacactgactgggacatcctcc 38926235 Query: 77 ctcctcgtaaaatcaaggatgttggtgccaaaaag 111 ||||||| || || ||||||||| |||||||||| Sbjct: 38926234 ctcctcgcaagattaaggatgttcatgccaaaaag 38926200 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38925488 agaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattgataatccag 38925429 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 359 cagagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattg 418 |||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||| Sbjct: 38925307 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 38925248 Query: 419 aagtttggcaggtaa 433 | ||||||||||||| Sbjct: 38925247 aggtttggcaggtaa 38925233 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 110 agcctaaggattgggatgacagagagtatattgaggatcccgatgcggttaaacctgagg 169 ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 38926118 agcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 38926059 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 524 aggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctagagaagataagg 583 |||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 38924967 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataagg 38924908 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 426 gcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgc 485 ||||||||| || ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 38925147 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 38925088 Query: 486 aaaacaggttgccgatgaaacgtggggtgcaaa 518 || | | | ||| || ||||| ||||||||||| Sbjct: 38925087 aagaaaagctgctgaggaaacatggggtgcaaa 38925055 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 581 aggaagctcaacaagcaagggaggaaggagagcgacgga 619 |||||||| ||| |||||||||||||||||||||||||| Sbjct: 38924831 aggaagctgaacgagcaagggaggaaggagagcgacgga 38924793 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 167 agggctatgattctattccaagagagattcctgacccaaa 206 ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 38925984 agggctatgattctattccaaaggagattcctgatccaaa 38925945
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 215 agcccgacacgtgggacgatgatgatgatggcatatggaaacctaggaggataccgaatc 274 |||| ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||| Sbjct: 198542 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 198483 Query: 275 cagcatacaaaggacaatggaagcgcaag 303 |||||||||| |||| ||||||||||||| Sbjct: 198482 cagcatacaagggaccatggaagcgcaag 198454 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 17 tacttgttgataaccgtgaaagagaatctgggagcatgtacactgattgggacatcttgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | Sbjct: 199176 tactagttgataaccgtgaaagagaatcagggagcatgtacactgactgggacatcctcc 199117 Query: 77 ctcctcgtaaaatcaaggatgttggtgccaaaaag 111 ||||||| || || ||||||||| |||||||||| Sbjct: 199116 ctcctcgcaagattaaggatgttcatgccaaaaag 199082 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198370 agaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattgataatccag 198311 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 359 cagagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattg 418 |||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||| Sbjct: 198189 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 198130 Query: 419 aagtttggcaggtaa 433 | ||||||||||||| Sbjct: 198129 aggtttggcaggtaa 198115 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 110 agcctaaggattgggatgacagagagtatattgaggatcccgatgcggttaaacctgagg 169 ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 199000 agcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 198941 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 524 aggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctagagaagataagg 583 |||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 197849 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataagg 197790 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 426 gcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgc 485 ||||||||| || ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 198029 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 197970 Query: 486 aaaacaggttgccgatgaaacgtggggtgcaaa 518 || | | | ||| || ||||| ||||||||||| Sbjct: 197969 aagaaaagctgctgaggaaacatggggtgcaaa 197937 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 581 aggaagctcaacaagcaagggaggaaggagagcgacgga 619 |||||||| ||| |||||||||||||||||||||||||| Sbjct: 197713 aggaagctgaacgagcaagggaggaaggagagcgacgga 197675 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 167 agggctatgattctattccaagagagattcctgacccaaa 206 ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 198866 agggctatgattctattccaaaggagattcctgatccaaa 198827
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 215 agcccgacacgtgggacgatgatgatgatggcatatggaaacctaggaggataccgaatc 274 |||| ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||| Sbjct: 90446 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 90387 Query: 275 cagcatacaaaggacaatggaagcgcaag 303 |||||||||| |||| ||||||||||||| Sbjct: 90386 cagcatacaagggaccatggaagcgcaag 90358 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 17 tacttgttgataaccgtgaaagagaatctgggagcatgtacactgattgggacatcttgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | Sbjct: 91080 tactagttgataaccgtgaaagagaatcagggagcatgtacactgactgggacatcctcc 91021 Query: 77 ctcctcgtaaaatcaaggatgttggtgccaaaaag 111 ||||||| || || ||||||||| |||||||||| Sbjct: 91020 ctcctcgcaagattaaggatgttcatgccaaaaag 90986 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90274 agaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattgataatccag 90215 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 359 cagagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattg 418 |||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||| Sbjct: 90093 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 90034 Query: 419 aagtttggcaggtaa 433 | ||||||||||||| Sbjct: 90033 aggtttggcaggtaa 90019 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 110 agcctaaggattgggatgacagagagtatattgaggatcccgatgcggttaaacctgagg 169 ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 90904 agcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 90845 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 524 aggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctagagaagataagg 583 |||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 89753 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataagg 89694 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 426 gcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgc 485 ||||||||| || ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 89933 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 89874 Query: 486 aaaacaggttgccgatgaaacgtggggtgcaaa 518 || | | | ||| || ||||| ||||||||||| Sbjct: 89873 aagaaaagctgctgaggaaacatggggtgcaaa 89841 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 581 aggaagctcaacaagcaagggaggaaggagagcgacgga 619 |||||||| ||| |||||||||||||||||||||||||| Sbjct: 89617 aggaagctgaacgagcaagggaggaaggagagcgacgga 89579 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 167 agggctatgattctattccaagagagattcctgacccaaa 206 ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 90770 agggctatgattctattccaaaggagattcctgatccaaa 90731
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 43768 agaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 43827 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 1 gatgcatcttatagtttacttgttgataaccgtgaaagagaatctgggagcatgtacact 60 ||||| ||||||||| |||||||||||||||| || ||||||| ||| || ||||||||| Sbjct: 42925 gatgcctcttatagtctacttgttgataaccgggagagagaatttggtagtatgtacact 42984 Query: 61 gattgggacatcttgcctcctcgtaaaatcaa 92 || ||||||||| | |||||||| || ||||| Sbjct: 42985 gactgggacatcctccctcctcgcaagatcaa 43016 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 226 tgggacgatgatgatgatggcatatggaaacctaggaggataccgaatccagcatacaaa 285 ||||| |||||||||||||| ||||||| ||||| | |||||||||||||| |||||| Sbjct: 43619 tgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatccagaatacaag 43678 Query: 286 ggacaatggaagcgcaag 303 |||| ||||| |||||| Sbjct: 43679 ggacgttggaaacgcaag 43696 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 359 cagagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattg 418 |||| |||||||| || ||||| ||||||| ||||||||| || ||||| | ||||||| Sbjct: 43966 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 44025 Query: 419 aagtttggcaggta 432 | |||||||||||| Sbjct: 44026 aggtttggcaggta 44039 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 524 aggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctagagaaga 578 |||||||||||||||| || || || ||||||||| |||||| ||||||||||| Sbjct: 44366 aggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctagagaaga 44420 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 167 agggctatgattctattccaagagagattcctgacccaaagga 209 |||||||||| |||||||| | |||||||||||| |||||||| Sbjct: 43253 agggctatgactctattcctaaagagattcctgatccaaagga 43295 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 426 gcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgc 485 |||||| ||||| ||||| |||||||||||||| | ||||| || |||||||| ||||| Sbjct: 44160 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 44219 Query: 486 aa 487 || Sbjct: 44220 aa 44221 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 118 gattgggatgacagagagtatattgaggatcccgatgcggttaaacctgagg 169 |||||||||||||| || |||||||| ||||| |||| |||||||| |||| Sbjct: 43127 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 43178
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 24856883 agaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 24856942 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 1 gatgcatcttatagtttacttgttgataaccgtgaaagagaatctgggagcatgtacact 60 ||||| ||||||||| |||||||||||||||| || ||||||| ||| || ||||||||| Sbjct: 24856040 gatgcctcttatagtctacttgttgataaccgggagagagaatttggtagtatgtacact 24856099 Query: 61 gattgggacatcttgcctcctcgtaaaatcaa 92 || ||||||||| | |||||||| || ||||| Sbjct: 24856100 gactgggacatcctccctcctcgcaagatcaa 24856131 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 226 tgggacgatgatgatgatggcatatggaaacctaggaggataccgaatccagcatacaaa 285 ||||| |||||||||||||| ||||||| ||||| | |||||||||||||| |||||| Sbjct: 24856734 tgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatccagaatacaag 24856793 Query: 286 ggacaatggaagcgcaag 303 |||| ||||| |||||| Sbjct: 24856794 ggacgttggaaacgcaag 24856811 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 359 cagagtttgaggatgatccagatttatatgtactgaaacctctgaagtatattggaattg 418 |||| |||||||| || ||||| ||||||| ||||||||| || ||||| | ||||||| Sbjct: 24857081 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 24857140 Query: 419 aagtttggcaggta 432 | |||||||||||| Sbjct: 24857141 aggtttggcaggta 24857154 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 524 aggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctagagaaga 578 |||||||||||||||| || || || ||||||||| |||||| ||||||||||| Sbjct: 24857481 aggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctagagaaga 24857535 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 167 agggctatgattctattccaagagagattcctgacccaaagga 209 |||||||||| |||||||| | |||||||||||| |||||||| Sbjct: 24856368 agggctatgactctattcctaaagagattcctgatccaaagga 24856410 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 426 gcaggtaaaagccggttctgtttttgacaacatcctcatttgcgatgacccggaatatgc 485 |||||| ||||| ||||| |||||||||||||| | ||||| || |||||||| ||||| Sbjct: 24857275 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 24857334 Query: 486 aa 487 || Sbjct: 24857335 aa 24857336 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 118 gattgggatgacagagagtatattgaggatcccgatgcggttaaacctgagg 169 |||||||||||||| || |||||||| ||||| |||| |||||||| |||| Sbjct: 24856242 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 24856293
>ref|NM_202064.1| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding AT1G08450 (CRT3) transcript variant AT1G08450.2 mRNA, complete cds Length = 1307 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 725 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 784 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 785 gaatttgaagatgatccagat 805 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 989 aaagctagagaagatgaggaagctc 1013
>ref|NM_100718.2| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding AT1G08450 (CRT3) transcript variant AT1G08450.1 mRNA, complete cds Length = 1469 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 887 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 946 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 947 gaatttgaagatgatccagat 967 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 1151 aaagctagagaagatgaggaagctc 1175
>gb|AY056320.1| Arabidopsis thaliana putative calreticulin protein (At1g08450) mRNA, complete cds Length = 1462 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 887 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 946 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 947 gaatttgaagatgatccagat 967 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 1151 aaagctagagaagatgaggaagctc 1175
>emb|BX815781.1|CNS0ACTU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 872 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 931 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 932 gaatttgaagatgatccagat 952 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 1136 aaagctagagaagatgaggaagctc 1160
>emb|BX815527.1|CNS0AATS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 874 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 933 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 934 gaatttgaagatgatccagat 954 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 1138 aaagctagagaagatgaggaagctc 1162
>gb|BT002494.1| Arabidopsis thaliana calreticulin, putative (At1g08450) mRNA, complete cds Length = 1426 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 887 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 946 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 947 gaatttgaagatgatccagat 967
>gb|U66345.1|ATU66345 Arabidopsis thaliana calreticulin (Crt3) mRNA, complete cds Length = 1424 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatcca 360 |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 884 aagagaatcaagaacccgaactacaagggaaaatggaagaacccatggatagataatcca 943 Query: 361 gagtttgaggatgatccagat 381 || ||||| |||||||||||| Sbjct: 944 gaatttgaagatgatccagat 964 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 1148 aaagctagagaagatgaggaagctc 1172
>gb|AY679606.1| Fragaria x ananassa calreticulin 3 mRNA, partial cds Length = 170 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 271 aatccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggt 330 |||||||| |||||||||| ||||| ||||||| | | |||||||||||||| || || Sbjct: 34 aatccagcttacaaaggaccatggagacgcaagagagtcaagaaccctaactataaaggg 93 Query: 331 aaatggaagatcccatggattgataatccagagtttgaggatgatccagatttatatgta 390 |||||||||| || |||||||||||||| |||||||| ||||| || ||| | |||||| Sbjct: 94 aaatggaagactccttggattgataatccggagtttgaagatgaccctgatctttatgta 153 Query: 391 ct 392 || Sbjct: 154 ct 155
>gb|AF283816.1|AF283816 Pinus taeda calreticulin mRNA, complete cds Length = 1593 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 271 aatccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggt 330 ||||||| ||| ||||||| ||||||| |||||||||||||| ||||||||||||||| Sbjct: 834 aatccagaatataaaggaccctggaagcctaagaaaattaagaatcctaactacaagggt 893 Query: 331 aaatggaagatcccatggattgataatccagagtttgaggatgatccaga 380 ||||||||| ||| |||||| ||||| || || ||||||||||||| Sbjct: 894 aaatggaaggctccaatgattgacaatcctgatttcaaggatgatccaga 943 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 102 tgccaaaaagcctaaggattgggatga 128 ||||||||||||| ||||||||||||| Sbjct: 665 tgccaaaaagcctgaggattgggatga 691
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 310 aagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 |||||||| ||||||||||| |||||||||| ||||||||| |||||||||| Sbjct: 50111 aagaacccgaactacaagggaaaatggaagaacccatggatagataatccag 50060
>gb|AF325720.1|AF325720 Pennisetum ciliare calreticulin-like protein mRNA, partial cds Length = 851 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||||| |||||||| |||||||||||||| ||| |||||||||| || |||||| Sbjct: 88 tacaaaggaccatggaagcaaaagaaaattaagaatcctgactacaagggcaagtggaag 147
>dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, complete cds Length = 1558 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 874 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccagggcaaatggaag 933
>emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding protein Length = 1342 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 274 ccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaa 333 |||| |||||| |||| |||||| | |||||||| |||||||| |||||| |||||||| Sbjct: 884 ccagaatacaagggaccatggaaacaaaagaaaatcaagaacccgaactaccagggtaaa 943 Query: 334 tggaag 339 |||||| Sbjct: 944 tggaag 949
>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor Length = 1614 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 274 ccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaa 333 |||| |||||| |||| |||||| | |||||||| |||||||| |||||| |||||||| Sbjct: 901 ccagaatacaagggaccatggaaacaaaagaaaatcaagaacccgaactaccagggtaaa 960 Query: 334 tggaag 339 |||||| Sbjct: 961 tggaag 966
>emb|X78057.1|ZMCRHR Z.mays CRH mRNA Length = 1183 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 274 ccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaa 333 |||| |||||| |||| |||||| | |||||||| |||||||| |||||| |||||||| Sbjct: 529 ccagaatacaagggaccatggaaacaaaagaaaatcaagaacccgaactaccagggtaaa 588 Query: 334 tggaag 339 |||||| Sbjct: 589 tggaag 594
>emb|X80756.1|CAPCRTC C.annuum PCRTC mRNA Length = 1543 Score = 60.0 bits (30), Expect = 9e-06 Identities = 71/82 (86%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaa-gatcccatggattgataatcc 359 ||||||||||||||||| ||||||||||| || ||||| | ||| || ||||||||| || Sbjct: 823 aagaaaattaagaaccccaactacaaggggaagtggaaggctcctat-gattgataaccc 881 Query: 360 agagtttgaggatgatccagat 381 |||||| ||||||| |||||| Sbjct: 882 agagttcaaggatgacccagat 903
>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds Length = 1545 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 274 ccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaa 333 |||| |||||| |||| |||||| | |||||||| |||||||| |||||| |||||||| Sbjct: 903 ccagaatacaagggaccatggaaacaaaagaaaatcaagaacccgaactaccagggtaaa 962 Query: 334 tggaag 339 |||||| Sbjct: 963 tggaag 968
>gb|AY103855.1| Zea mays PCO074428 mRNA sequence Length = 1787 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 274 ccagcatacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaa 333 |||| |||||| |||| |||||| | |||||||| |||||||| |||||| |||||||| Sbjct: 958 ccagaatacaagggaccatggaaacaaaagaaaatcaagaacccgaactaccagggtaaa 1017 Query: 334 tggaag 339 |||||| Sbjct: 1018 tggaag 1023
>gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA, complete cds Length = 1248 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 291 atggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 843 atggaagcaaaagaaaatcaagaaccctaactaccagggcaaatggaag 891
>emb|X85382.1|NTRNATCAL N.tabacum mRNA for calreticulin Length = 1170 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 291 atggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 768 atggaagccaaagaaaattaagaaccccaactacaaggggaagtggaag 816
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence Length = 113361 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 264 gataccgaatccagcatacaaaggacaatggaa 296 |||||||||||||||||||||||||| |||||| Sbjct: 106744 gataccgaatccagcatacaaaggaccatggaa 106776 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaagatcccatggattgataatccag 361 ||||||| ||||| ||||||||||| || |||||||| | |||||||| |||||||||| Sbjct: 106891 agaaaatcaagaatcctaactacaaagggaaatggaaaactccatggatagataatccag 106950 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 439 ggttctgtttttgacaacatcctcatttgcgatgacccggaatatgcaaaacaggttg 496 ||||| || ||||||||||| | ||||||||||| || |||||||||||||| |||| Sbjct: 107272 ggttcagtatttgacaacattttgatttgcgatgatcctgaatatgcaaaacaagttg 107329
>emb|Z71395.1|NPCAL1MNR N.plumbaginifolia mRNA for calreticulin Length = 1558 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 291 atggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 871 atggaagccaaagaaaattaagaaccccaactacaaggggaagtggaag 919
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds Length = 1450 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 291 atggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 832 atggaagcaaaagaaaatcaagaaccctaactaccagggcaaatggaag 880
>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds Length = 1472 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 291 atggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 824 atggaagcaaaagaaaatcaagaaccctaactaccagggcaaatggaag 872
>ref|XM_470161.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1329 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||| | |||||| ||||||||||||| |||||||| ||||||||| Sbjct: 832 tacaagggaccatggaaccaaaagaaacttaagaaccctaattacaagggcaaatggaag 891
>ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 886 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 945
>ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 893 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 952
>ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2 mRNA Length = 1557 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 895 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 954
>ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2 mRNA Length = 1585 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 921 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 980
>dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H03, full insert sequence Length = 1675 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 915 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 974
>dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I16, full insert sequence Length = 1556 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 894 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 953
>dbj|AK070712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060M04, full insert sequence Length = 1780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||| | |||||| ||||||||||||| |||||||| ||||||||| Sbjct: 937 tacaagggaccatggaaccaaaagaaacttaagaaccctaattacaagggcaaatggaag 996
>dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E04, full insert sequence Length = 1586 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| ||||||||||||||| | || ||||||||| Sbjct: 921 tacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatggaag 980
>gb|AF052040.1|AF052040 Berberis stolonifera calreticulin mRNA, complete cds Length = 1547 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| ||| ||||||||| |||||||| ||||||||||||| |||||| || |||||| Sbjct: 843 tacaagggagaatggaagccaaagaaaatcaagaaccctaacttcaagggaaagtggaag 902
>gb|U74630.1|RCU74630 Ricinus communis calreticulin mRNA, complete cds Length = 1514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 291 atggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaa 338 |||||| | |||||||||||||||||| ||||||||||| || ||||| Sbjct: 834 atggaaacccaagaaaattaagaaccccaactacaagggcaagtggaa 881
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| ||||||||||||| |||||||| ||||||||| Sbjct: 34649620 agaaacttaagaaccctaattacaagggcaaatggaag 34649583
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| ||||||||||||| |||||||| ||||||||| Sbjct: 107337 agaaacttaagaaccctaattacaagggcaaatggaag 107300
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| ||||||||||||| |||||||| ||||||||| Sbjct: 34739692 agaaacttaagaaccctaattacaagggcaaatggaag 34739655
>ref|XM_313898.2| Anopheles gambiae str. PEST ENSANGP00000024049 (ENSANGG00000019354), partial mRNA Length = 1218 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 312 gaaccctaactacaagggtaaatgg 336 ||||||||||||||||||||||||| Sbjct: 948 gaaccctaactacaagggtaaatgg 972
>ref|XM_313899.2| Anopheles gambiae str. PEST ENSANGP00000021843 (ENSANGG00000019354), partial mRNA Length = 1356 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 312 gaaccctaactacaagggtaaatgg 336 ||||||||||||||||||||||||| Sbjct: 981 gaaccctaactacaagggtaaatgg 1005
>gb|AY818155.1| Phormium cookianum clone PhN4R28 putative calreticulin mRNA, partial cds Length = 656 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 463 atttgcgatgacccggaatatgcaaaacaggttgccgatgaaacgtggg 511 |||||||||||||| |||||||||||| || |||| || ||||| |||| Sbjct: 597 atttgcgatgaccctgaatatgcaaaaaagtttgctgaagaaacatggg 645 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||||||||| ||||| ||||||||||| || |||||| Sbjct: 435 aagaaaattaaaaaccccaactacaagggaaagtggaag 473
>gb|U74631.1|RCU74631 Ricinus communis calreticulin gene, complete cds Length = 4975 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaa 338 |||||||||||||||| ||||||||||| || ||||| Sbjct: 3861 agaaaattaagaaccccaactacaagggcaagtggaa 3897
>ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.2 mRNA, complete cds Length = 1444 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccc 317 ||||||||| |||||||||||||||||| Sbjct: 860 aatggaagcccaagaaaattaagaaccc 887
>ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.1 mRNA, complete cds Length = 1492 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccc 317 ||||||||| |||||||||||||||||| Sbjct: 860 aatggaagcccaagaaaattaagaaccc 887
>gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA Length = 1251 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccc 317 ||||||||| |||||||||||||||||| Sbjct: 836 aatggaagcccaagaaaattaagaaccc 863
>gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complete cds Length = 1278 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccc 317 ||||||||| |||||||||||||||||| Sbjct: 833 aatggaagcccaagaaaattaagaaccc 860
>gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At1g56340; F13N6.20) mRNA, complete cds Length = 1440 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccc 317 ||||||||| |||||||||||||||||| Sbjct: 860 aatggaagcccaagaaaattaagaaccc 887
>dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F11, full insert sequence Length = 1539 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 280 tacaaaggacaatggaagcgcaagaaaattaagaaccctaactacaagggtaaatggaag 339 ||||| |||| |||||||| |||||||| | ||||||||||||| | || ||||||||| Sbjct: 893 tacaagggaccatggaagcaaaagaaaatcaggaaccctaactaccaaggcaaatggaag 952
>gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt1) mRNA, complete cds Length = 1463 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccc 317 ||||||||| |||||||||||||||||| Sbjct: 836 aatggaagcccaagaaaattaagaaccc 863
>gb|BT013428.1| Lycopersicon esculentum clone 132068F, mRNA sequence Length = 1600 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| |||||||| ||||||||||| || |||||| Sbjct: 888 aagaaaatcaagaaccccaactacaagggaaagtggaag 926
>emb|AL136538.1|SPAC30 S.pombe chromosome I cosmid c30 Length = 36315 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 518 ataaggaggctgaaaaggaggct 540 ||||||||||||||||||||||| Sbjct: 34195 ataaggaggctgaaaaggaggct 34217
>emb|Z66525.1|SPAC29E6 S.pombe chromosome I cosmid c29E6 Length = 19514 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 518 ataaggaggctgaaaaggaggct 540 ||||||||||||||||||||||| Sbjct: 18039 ataaggaggctgaaaaggaggct 18061
>emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin Length = 1564 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 301 aagaaaattaagaaccctaactacaagggtaaatggaag 339 |||||||| |||||||| ||||||||||| || |||||| Sbjct: 872 aagaaaatcaagaaccccaactacaagggcaagtggaag 910
>ref|NM_001019997.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC30.14c), partial mRNA Length = 3258 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 518 ataaggaggctgaaaaggaggct 540 ||||||||||||||||||||||| Sbjct: 1314 ataaggaggctgaaaaggaggct 1292
>ref|XM_714212.1| Candida albicans SC5314 ubiquinol cytochrome-c reductase subunit 7 (CaO19_13074), mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 526 gctgaaaaggaggcttttgaagaagctgaa 555 ||||||||||| ||||||||| |||||||| Sbjct: 328 gctgaaaaggaagcttttgaaaaagctgaa 357
>ref|XM_714096.1| Candida albicans SC5314 ubiquinol cytochrome-c reductase subunit 7 (CaO19_5629), mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 526 gctgaaaaggaggcttttgaagaagctgaa 555 ||||||||||| ||||||||| |||||||| Sbjct: 328 gctgaaaaggaagcttttgaaaaagctgaa 357
>gb|AY372389.1| Oncorhynchus mykiss calreticulin (CRT) mRNA, complete cds Length = 1823 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 557 aggagaggaaagctagagaaga 578 |||||||||||||||||||||| Sbjct: 1118 aggagaggaaagctagagaaga 1139
>gb|AC127359.4| Mus musculus BAC clone RP23-110G23 from chromosome 1, complete sequence Length = 185255 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggagag 563 |||||||||||||||||||||| Sbjct: 3538 ttgaagaagctgaaaaggagag 3559
>gb|AC130817.4| Mus musculus BAC clone RP23-68J13 from 16, complete sequence Length = 193917 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 542 ttgaagaagctgaaaaggagag 563 |||||||||||||||||||||| Sbjct: 36170 ttgaagaagctgaaaaggagag 36149
>gb|AC008021.10| Homo sapiens chromosome 18, clone RP11-504H5, complete sequence Length = 169439 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tgaagaagctgaaaaggagagg 564 |||||||||||||||||||||| Sbjct: 44468 tgaagaagctgaaaaggagagg 44489
>gb|AC090398.12| Homo sapiens chromosome 18, clone RP11-669I1, complete sequence Length = 133378 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tgaagaagctgaaaaggagagg 564 |||||||||||||||||||||| Sbjct: 82106 tgaagaagctgaaaaggagagg 82127
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||||| ||||||||||||||| | || ||||||||| Sbjct: 8171741 agaaaatcaagaaccctaactaccaaggcaaatggaag 8171778
>dbj|AB193327.1| Daphnia magna nrk, vasa genes for neurospecific receptor kinase, VASA RNA helicase, complete cds Length = 17324 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 gatgatgatgatggcatatgga 253 |||||||||||||||||||||| Sbjct: 3350 gatgatgatgatggcatatgga 3329
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete sequence Length = 90698 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||||| ||||||||||| |||||||| || |||||| Sbjct: 19504 agaaaatcaagaaccctaattacaagggcaagtggaag 19541
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||||| ||||||||||||||| | || ||||||||| Sbjct: 54764 agaaaatcaagaaccctaactaccaaggcaaatggaag 54801
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 302 agaaaattaagaaccctaactacaagggtaaatggaag 339 ||||||| ||||||||||||||| | || ||||||||| Sbjct: 105513 agaaaatcaagaaccctaactaccaaggcaaatggaag 105550
>gb|AC135017.3| Mus musculus BAC clone RP24-254D14 from 1, complete sequence Length = 190598 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggagag 563 |||||||||||||||||||||| Sbjct: 162746 ttgaagaagctgaaaaggagag 162767
>gb|AC124514.4| Mus musculus BAC clone RP23-450H18 from 16, complete sequence Length = 182032 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggagag 563 |||||||||||||||||||||| Sbjct: 10819 ttgaagaagctgaaaaggagag 10840
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 ggaggctgaaaaggaggcttt 542 ||||||||||||||||||||| Sbjct: 757230 ggaggctgaaaaggaggcttt 757250
>gb|AC080131.9| Trypanosoma brucei chromosome 4 clone RPCI93-2H8, complete sequence Length = 163689 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 ggaggctgaaaaggaggcttt 542 ||||||||||||||||||||| Sbjct: 125349 ggaggctgaaaaggaggcttt 125329
>gb|BC079976.1| Xenopus laevis MGC80665 protein, mRNA (cDNA clone MGC:80665 IMAGE:5507120), complete cds Length = 2163 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 tggaattgaagtttggcaggt 431 ||||||||||||||||||||| Sbjct: 1387 tggaattgaagtttggcaggt 1367
>gb|AC135108.3| Mus musculus BAC clone RP24-538P2 from chromosome 9, complete sequence Length = 137981 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 gtgggacgatgatgatgatgg 245 ||||||||||||||||||||| Sbjct: 19003 gtgggacgatgatgatgatgg 19023
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 gaaagctagagaagataagga 584 ||||||||||||||||||||| Sbjct: 166646 gaaagctagagaagataagga 166626
>gb|AC114645.9| Mus musculus chromosome 9, clone RP24-131G14, complete sequence Length = 214734 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gtgggacgatgatgatgatgg 245 ||||||||||||||||||||| Sbjct: 23303 gtgggacgatgatgatgatgg 23283
>gb|AY558046.1| Saccharomyces cerevisiae clone FLH006492.01X YOR196C gene, complete cds Length = 1245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 attgggacatcttgcctcctc 82 ||||||||||||||||||||| Sbjct: 471 attgggacatcttgcctcctc 451
>gb|AC138173.2| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 145253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggaga 562 ||||||||||||||||||||| Sbjct: 129553 ttgaagaagctgaaaaggaga 129573
>ref|XM_820852.1| Trypanosoma brucei TREU927 clone RPCI93-2H8 hypothetical protein (Tb927.4.2870) partial mRNA Length = 852 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 ggaggctgaaaaggaggcttt 542 ||||||||||||||||||||| Sbjct: 543 ggaggctgaaaaggaggcttt 563
>gb|AC127277.2| Mus musculus BAC clone RP24-221P14 from chromosome 3, complete sequence Length = 159339 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 tgaagaagctgaaaaggagag 563 ||||||||||||||||||||| Sbjct: 30539 tgaagaagctgaaaaggagag 30559
>ref|XM_720323.1| Plasmodium yoelii yoelii str. 17XNL arginase (PY05019) partial mRNA Length = 1134 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 aaggaggctgaaaaggaggct 540 ||||||||||||||||||||| Sbjct: 304 aaggaggctgaaaaggaggct 324 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 aaggaggctgaaaaggaggct 540 ||||||||||||||||||||| Sbjct: 268 aaggaggctgaaaaggaggct 288
>ref|XM_725720.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02868) partial mRNA Length = 4689 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 aaggaggctgaaaaggaggct 540 ||||||||||||||||||||| Sbjct: 1852 aaggaggctgaaaaggaggct 1872
>ref|XM_726356.1| Plasmodium yoelii yoelii str. 17XNL arginase (PY03443) partial mRNA Length = 1134 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 aaggaggctgaaaaggaggct 540 ||||||||||||||||||||| Sbjct: 304 aaggaggctgaaaaggaggct 324 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 aaggaggctgaaaaggaggct 540 ||||||||||||||||||||| Sbjct: 268 aaggaggctgaaaaggaggct 288
>gb|AC119816.5| Mus musculus chromosome 5, clone RP23-59B8, complete sequence Length = 186564 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggaga 562 ||||||||||||||||||||| Sbjct: 134871 ttgaagaagctgaaaaggaga 134891
>gb|AC160532.4| Mus musculus chromosome 5, clone RP24-158N23, complete sequence Length = 160144 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggaga 562 ||||||||||||||||||||| Sbjct: 53081 ttgaagaagctgaaaaggaga 53101
>gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosome 14, complete sequence Length = 202193 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ttgaagaagctgaaaaggaga 562 ||||||||||||||||||||| Sbjct: 35867 ttgaagaagctgaaaaggaga 35887
>dbj|AB227532.1| Aspergillus oryzae cDNA, contig sequence: AoEST4403 Length = 902 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 tgacccaaaggataagaagcccgac 222 |||||| |||||||||||||||||| Sbjct: 363 tgaccccaaggataagaagcccgac 387 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 tgacccaaaggataagaagcccgac 222 |||||| |||||||||||||||||| Sbjct: 57 tgaccccaaggataagaagcccgac 81
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 cagatttatatgtactgaaac 397 ||||||||||||||||||||| Sbjct: 160624 cagatttatatgtactgaaac 160604
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 tgacccaaaggataagaagcccgac 222 |||||| |||||||||||||||||| Sbjct: 834683 tgaccccaaggataagaagcccgac 834707
>dbj|AK220714.1| Arabidopsis thaliana mRNA for calreticulin like protein, partial cds, clone: RAFL22-04-K13 Length = 392 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 aaagctagagaagataaggaagctc 589 ||||||||||||||| ||||||||| Sbjct: 106 aaagctagagaagatgaggaagctc 130
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 gcttttgaagaagctgaaaag 558 ||||||||||||||||||||| Sbjct: 271288 gcttttgaagaagctgaaaag 271308
>gb|AC068789.16|AC068789 Homo sapiens 12 BAC RP11-1049A21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 34150 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 agaagctgaaaaggagaggaa 566 ||||||||||||||||||||| Sbjct: 19002 agaagctgaaaaggagaggaa 19022
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 cagatttatatgtactgaaac 397 ||||||||||||||||||||| Sbjct: 63671 cagatttatatgtactgaaac 63651
>dbj|AB093603.1| Turnip mosaic virus gene for polyprotein, complete cds, isolate:PV0104 Length = 9798 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 aagctgaaaaggagaggaaag 568 ||||||||||||||||||||| Sbjct: 8766 aagctgaaaaggagaggaaag 8786
>emb|Z75104.1|SCYOR196C S.cerevisiae chromosome XV reading frame ORF YOR196c Length = 1691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 attgggacatcttgcctcctc 82 ||||||||||||||||||||| Sbjct: 1036 attgggacatcttgcctcctc 1056
>gb|L11999.1|YSCLIPOIC Saccharomyces cerevisiae (clone pg189/ST3) lipoic acid synthase (LIP) gene, 5' end cds Length = 2200 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 attgggacatcttgcctcctc 82 ||||||||||||||||||||| Sbjct: 751 attgggacatcttgcctcctc 731
>dbj|AB076532.1| Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:PV0104 Length = 864 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 aagctgaaaaggagaggaaag 568 ||||||||||||||||||||| Sbjct: 44 aagctgaaaaggagaggaaag 64
>gb|AY739095.1| Takifugu rubripes frMCM8, frQ9UJA2, frPLCB1, frAL834445, frCDC5L, and frSUPTH3 genes, complete sequence; frRUNT (frRUNT) gene, complete cds; and frFSTL6 gene, complete sequence Length = 109075 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aagctgaaaaggagaggaaa 567 |||||||||||||||||||| Sbjct: 67425 aagctgaaaaggagaggaaa 67444
>ref|NM_100791.2| Arabidopsis thaliana calcium ion binding AT1G09210 mRNA, complete cds Length = 1724 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccctaactacaaggg 329 ||||||||| ||| |||| |||||||| ||||||||||| Sbjct: 907 aatggaagcctaagcaaatcaagaaccccaactacaaggg 946
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 aagctgaaaaggagaggaaa 567 |||||||||||||||||||| Sbjct: 1693046 aagctgaaaaggagaggaaa 1693027
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gacgatgatgatgatggcat 248 |||||||||||||||||||| Sbjct: 163360 gacgatgatgatgatggcat 163341
>gb|AF016679.1| Caenorhabditis elegans cosmid T28C12, complete sequence Length = 32056 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggacgatgatgatgatggca 247 |||||||||||||||||||| Sbjct: 27060 ggacgatgatgatgatggca 27041
>ref|XM_955744.1| Neurospora crassa OR74A hypothetical protein ( (U51117) ascospore maturation 1 protein [Neurospora crassa OR74A] ) (NCU01414.1) partial mRNA Length = 1932 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gggacgatgatgatgatggc 246 |||||||||||||||||||| Sbjct: 1757 gggacgatgatgatgatggc 1776
>ref|XM_326906.1| Neurospora crassa OR74A hypothetical protein ( (U51117) ascospore maturation 1 protein [Neurospora crassa OR74A] ) (NCU01414.1) partial mRNA Length = 1932 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gggacgatgatgatgatggc 246 |||||||||||||||||||| Sbjct: 1757 gggacgatgatgatgatggc 1776
>gb|AC183321.1| Ornithorhynchus anatinus BAC clone OABb-153H21 from chromosome unknown, complete sequence Length = 161060 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gatgatgatgatggcatatg 251 |||||||||||||||||||| Sbjct: 88402 gatgatgatgatggcatatg 88421
>gb|AC163107.3| Mus musculus BAC clone RP23-156A21 from chromosome 16, complete sequence Length = 221691 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tgaagaagctgaaaaggaga 562 |||||||||||||||||||| Sbjct: 175074 tgaagaagctgaaaaggaga 175055
>gb|AC126427.4| Mus musculus BAC clone RP24-365B12 from chromosome 15, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttgaagaagctgaaaaggag 561 |||||||||||||||||||| Sbjct: 3858 ttgaagaagctgaaaaggag 3839
>ref|XM_650149.1| Entamoeba histolytica HM-1:IMSS calreticulin (33.t00005) partial mRNA Length = 1170 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 406 tatattggaattgaagtttggcaggtaaaagc 437 |||||||||||||| |||||||| || ||||| Sbjct: 916 tatattggaattgatgtttggcaagttaaagc 947
>gb|AC124134.8| Mus musculus chromosome 12, clone RP23-235G12, complete sequence Length = 220574 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 aagcaagggaggaaggagag 612 |||||||||||||||||||| Sbjct: 182494 aagcaagggaggaaggagag 182513
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence Length = 180971 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 aagaaccctaactacaaggg 329 |||||||||||||||||||| Sbjct: 160038 aagaaccctaactacaaggg 160057
>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a ribosomal protein S16 (RPS16) pseudogene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and a CpG island, complete sequence Length = 199601 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 555 aaaggagaggaaagctagagaaga 578 ||||||||||||||| |||||||| Sbjct: 149254 aaaggagaggaaagcaagagaaga 149231
>emb|AL353146.9| Human DNA sequence from clone RP11-168O10 on chromosome 10 Contains the IFIT1 gene for interferon-induced protein with tetratricopeptide repeats 1, the 5' end of a variant of the LIPA gene for lipase A lysosomal acid cholesterol esterase (Wolman disease), the gene for retinoic acid- and interferon-inducible protein (58kD) (RI58), a novel gene, the gene for a novel protein similar to monocarboxylate, the 3' end of a novel gene and a CpG island, complete sequence Length = 126887 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 aacaagcaagggaggaagga 609 |||||||||||||||||||| Sbjct: 121609 aacaagcaagggaggaagga 121628
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 agcaagggaggaaggagagc 613 |||||||||||||||||||| Sbjct: 135544 agcaagggaggaaggagagc 135525
>emb|AL050333.18|HSDJ93K22 Human DNA sequence from clone RP1-93K22 on chromosome 6q14.1-15.3 Contains the gene for a novel BTB/POZ domain containing protein (KIAA1417) and a CpG island, complete sequence Length = 113804 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagattcctgacccaaagga 209 |||||||||||||||||||| Sbjct: 42701 gagattcctgacccaaagga 42720
>emb|AL096710.8|HSDJ61B2 Human DNA sequence from clone RP1-61B2 on chromosome 6p11.2-12.3 Contains part of the BPAG1 gene for bullous pemphigoid antigen 1 (230/240kD), complete sequence Length = 119666 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gacgatgatgatgatggcat 248 |||||||||||||||||||| Sbjct: 52719 gacgatgatgatgatggcat 52700
>gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's Hospital Oakland Research Institute) complete sequence Length = 233080 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tgaggatgatccagatttat 385 |||||||||||||||||||| Sbjct: 162191 tgaggatgatccagatttat 162172
>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160421 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tttatatgtactgaaacctc 400 |||||||||||||||||||| Sbjct: 77349 tttatatgtactgaaacctc 77368
>emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC clone B8P8 Length = 75910 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gggacgatgatgatgatggc 246 |||||||||||||||||||| Sbjct: 57796 gggacgatgatgatgatggc 57815
>emb|AJ577476.2|KMA577476 Kluyveromyces marxianus tpi1 gene for triosephosphate isomerase Length = 1612 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aaatcaaggatgttggtgcc 105 |||||||||||||||||||| Sbjct: 806 aaatcaaggatgttggtgcc 825
>emb|AJ237815.1|PAD237815 Porcine adenovirus serotype 3 complete genome, strain IAF Length = 34094 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggacgatgatgatgatggca 247 |||||||||||||||||||| Sbjct: 28347 ggacgatgatgatgatggca 28328
>emb|CR626868.8| Zebrafish DNA sequence from clone DKEY-164P4 in linkage group 14, complete sequence Length = 75430 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgaagtatattggaattgaa 420 |||||||||||||||||||| Sbjct: 74324 tgaagtatattggaattgaa 74305
>emb|BX511257.16| Zebrafish DNA sequence from clone DKEY-280E21 in linkage group 14, complete sequence Length = 166973 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgaagtatattggaattgaa 420 |||||||||||||||||||| Sbjct: 894 tgaagtatattggaattgaa 875
>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 560 agaggaaagctagagaa--gataaggaagct 588 ||||||||||||||||| |||||||||||| Sbjct: 137361 agaggaaagctagagaagtgataaggaagct 137391
>gb|AC114795.5| Homo sapiens BAC clone RP11-681A4 from 4, complete sequence Length = 8360 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 530 aaaaggaggcttttgaagaagctgaaaa 557 ||||||||||||| |||||| ||||||| Sbjct: 7227 aaaaggaggctttagaagaatctgaaaa 7254
>dbj|AK125655.1| Homo sapiens cDNA FLJ43667 fis, clone SYNOV4007215 Length = 3375 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gacgatgatgatgatggcat 248 |||||||||||||||||||| Sbjct: 1425 gacgatgatgatgatggcat 1444
>gb|AC083913.2| Genomic sequence for Mus musculus, clone RP23-376A14, complete sequence Length = 218940 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tgggacgatgatgatgatgg 245 |||||||||||||||||||| Sbjct: 194486 tgggacgatgatgatgatgg 194505
>gb|AF400227.1| Homo sapiens bullous pemphigoid antigen 1 eB (BPAG1) mRNA, partial cds Length = 9180 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gacgatgatgatgatggcat 248 |||||||||||||||||||| Sbjct: 6805 gacgatgatgatgatggcat 6824
>gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K11, complete sequence Length = 222317 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 aagctgaaaaggagaggaaa 567 |||||||||||||||||||| Sbjct: 157606 aagctgaaaaggagaggaaa 157587
>gb|AY059662.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccctaactacaaggg 329 ||||||||| ||| |||| |||||||| ||||||||||| Sbjct: 833 aatggaagcctaagcaaatcaagaaccccaactacaaggg 872
>gb|U41011.1| Caenorhabditis elegans cosmid D2024, complete sequence Length = 28105 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gacgatgatgatgatggcat 248 |||||||||||||||||||| Sbjct: 7228 gacgatgatgatgatggcat 7209
>emb|CR386602.1| Gallus gallus finished cDNA, clone ChEST293j21 Length = 1156 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tctgaagtatattggaattgaagt 422 ||||||| |||||||||||||||| Sbjct: 341 tctgaaggatattggaattgaagt 364
>gb|AC146883.3| Callithrix jacchus clone CH259-225J7, complete sequence Length = 216802 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 aagctgaaaaggagaggaaa 567 |||||||||||||||||||| Sbjct: 164655 aagctgaaaaggagaggaaa 164636
>gb|AY045656.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA, complete cds Length = 1516 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccctaactacaaggg 329 ||||||||| ||| |||| |||||||| ||||||||||| Sbjct: 875 aatggaagcctaagcaaatcaagaaccccaactacaaggg 914
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 gaagaagctgaaaaggagaggaaa 567 |||||||||||||||| ||||||| Sbjct: 234662 gaagaagctgaaaaggcgaggaaa 234685
>gb|AC096652.1| Homo sapiens BAC clone RP11-16N2 from 4, complete sequence Length = 93274 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 530 aaaaggaggcttttgaagaagctgaaaa 557 ||||||||||||| |||||| ||||||| Sbjct: 867 aaaaggaggctttagaagaatctgaaaa 894
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence Length = 204294 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gaagaagctgaaaaggagag 563 |||||||||||||||||||| Sbjct: 92280 gaagaagctgaaaaggagag 92299
>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete sequence Length = 93234 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aagaaaattaagaaccctaa 320 |||||||||||||||||||| Sbjct: 21944 aagaaaattaagaaccctaa 21925
>gb|AY086745.1| Arabidopsis thaliana clone 27210 mRNA, complete sequence Length = 1532 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccctaactacaaggg 329 ||||||||| ||| |||| |||||||| ||||||||||| Sbjct: 907 aatggaagcctaagcaaatcaagaaccccaactacaaggg 946
>gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complete sequence Length = 153610 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 gaagctgaaaaggagaggaaagct 570 |||||| ||||||||||||||||| Sbjct: 86553 gaagctcaaaaggagaggaaagct 86530
>gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosome 12, complete sequence Length = 202288 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 aagcaagggaggaaggagag 612 |||||||||||||||||||| Sbjct: 136750 aagcaagggaggaaggagag 136731
>dbj|BS000015.1| Pan troglodytes chromosome 22 clone:PTB-017F24, map 22, complete sequences Length = 117746 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 tttgaggatgatccagatttatat 387 ||||| |||||||||||||||||| Sbjct: 34802 tttgaagatgatccagatttatat 34825
>gb|AF222684.1|AF222684 Homo sapiens chromosome 21 BAC B194B7 map 21q11.2, complete sequence Length = 116459 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 tttgaggatgatccagatttatat 387 ||||| |||||||||||||||||| Sbjct: 61625 tttgaagatgatccagatttatat 61648
>emb|AM050264.1| Cercopis vulnerata mRNA for putative H3K9 methyltransferase (su(var)3-9 gene) Length = 1980 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 541 tttgaagaagctgaaaaggagaggaaag 568 ||||||||||||||||| |||||||||| Sbjct: 1351 tttgaagaagctgaaaa-gagaggaaag 1377
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 tttgaggatgatccagatttatat 387 ||||| |||||||||||||||||| Sbjct: 133302 tttgaagatgatccagatttatat 133325
>gb|AC154477.2| Mus musculus BAC clone RP24-134B24 from 14, complete sequence Length = 167259 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tgggacgatgatgatgatgg 245 |||||||||||||||||||| Sbjct: 46879 tgggacgatgatgatgatgg 46898
>gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequence Length = 167396 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 aagctgaaaaggagaggaaa 567 |||||||||||||||||||| Sbjct: 18072 aagctgaaaaggagaggaaa 18053
>gb|AF083132.1|AF083132 Porcine adenovirus 3 strain 6618, complete genome Length = 34094 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggacgatgatgatgatggca 247 |||||||||||||||||||| Sbjct: 28351 ggacgatgatgatgatggca 28332
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 aaaaggaggcttttgaagaagctg 553 ||||||||| |||||||||||||| Sbjct: 1413655 aaaaggaggattttgaagaagctg 1413678
>gb|AC141482.4| Mus musculus BAC clone RP23-159C3 from 16, complete sequence Length = 180832 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tgaagaagctgaaaaggaga 562 |||||||||||||||||||| Sbjct: 108537 tgaagaagctgaaaaggaga 108556
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence Length = 214005 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tgaagaagctgaaaaggagaggaa 566 |||||||||||||| ||||||||| Sbjct: 170522 tgaagaagctgaaagggagaggaa 170499
>gb|AF019376.1|AF019376 Brassica napus calreticulin mRNA, complete cds Length = 1600 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccctaactacaaggg 329 ||||||||| |||| |||| || ||||| ||||||||||| Sbjct: 863 aatggaagcccaagcaaatcaaaaaccccaactacaaggg 902
>dbj|AP007290.1| Lotus japonicus genomic DNA, clone:LjT20H21, TM0319, complete sequence Length = 64598 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 302 agaaaattaagaaccctaactacaagggtaaatgga 337 ||||||| ||| ||||||||||||| || ||||||| Sbjct: 27951 agaaaatcaagcaccctaactacaaaggaaaatgga 27916
>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence Length = 228138 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttgaagaagctgaaaaggag 561 |||||||||||||||||||| Sbjct: 149561 ttgaagaagctgaaaaggag 149542
>gb|U51117.1|NCU51117 Neurospora crassa ascospore maturation 1 protein (Asm-1) and putative unknown ORF genes, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gggacgatgatgatgatggc 246 |||||||||||||||||||| Sbjct: 3270 gggacgatgatgatgatggc 3289
>emb|AL928795.6| Mouse DNA sequence from clone RP23-38B1 on chromosome 2, complete sequence Length = 28716 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttgaagaagctgaaaaggag 561 |||||||||||||||||||| Sbjct: 20381 ttgaagaagctgaaaaggag 20362
>ref|NM_020388.2| Homo sapiens dystonin (DST), transcript variant 1eB, mRNA Length = 9348 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gacgatgatgatgatggcat 248 |||||||||||||||||||| Sbjct: 6907 gacgatgatgatgatggcat 6926
>gb|U27698.1|ATU27698 Arabidopsis thaliana calreticulin (AtCRTL) mRNA, partial cds Length = 1413 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 290 aatggaagcgcaagaaaattaagaaccctaactacaaggg 329 ||||||||| ||| |||| |||||||| ||||||||||| Sbjct: 788 aatggaagcctaagcaaatcaagaaccccaactacaaggg 827
>dbj|AB026117.1| Porcine adenovirus 3 DNA, complete genome Length = 34094 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggacgatgatgatgatggca 247 |||||||||||||||||||| Sbjct: 28347 ggacgatgatgatgatggca 28328 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,355,504 Number of Sequences: 3902068 Number of extensions: 6355504 Number of successful extensions: 143759 Number of sequences better than 10.0: 168 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 143016 Number of HSP's gapped (non-prelim): 741 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
