ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39g17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 1e-82
2dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 1e-82
3dbj|AK102869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
4gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6dbj|AK066336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
7dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
8gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, com... 46 0.14
9gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, com... 46 0.14
10dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.56
11ref|XM_803631.1| Trypanosoma cruzi strain CL Brener protein kina... 42 2.2
12emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 42 2.2
13gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, com... 42 2.2
14gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, compl... 42 2.2
15gb|AC154136.13| Mus musculus BAC RP23-184A3 (Roswell Park Cance... 42 2.2
16dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.2
17gb|AC165118.3| Oryctolagus cuniculus, clone Oryctolagus cuniculu... 40 8.7
18gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete se... 40 8.7
19emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, compl... 40 8.7
20gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complet... 40 8.7
21gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete... 40 8.7
22emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chro... 40 8.7
23gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, comp... 40 8.7
24gb|AC167922.2| Mycosphaerella graminicola clone JGIBBWB-5J8, com... 40 8.7
25emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on ch... 40 8.7 
>dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full
            insert sequence
          Length = 2096

 Score =  315 bits (159), Expect = 1e-82
 Identities = 380/453 (83%), Gaps = 3/453 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcgatgctcattgcccttcgg---catcagttgcaacaatggcaactctaccacagagcc 60
            |||||||||||| ||||| ||   | |||||||  |||||||||||||||||||||||||
Sbjct: 867  gcgatgctcattcccctttggtgtcctcagttgtgacaatggcaactctaccacagagcc 926

                                                                        
Query: 61   ctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgtataaaga 120
             || |||||| | || |||||||| ||||||||| | || ||||||||||| || | |||
Sbjct: 927  atacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctctacagaga 986

                                                                        
Query: 121  gaagtaccaggacaagcaaggtggaaaaattggactcacattgctcggttcgtggaacaa 180
            ||||||||||| ||  ||||| ||| ||||||| |||||||||||||||| |||| || |
Sbjct: 987  gaagtaccaggccactcaaggaggacaaattgggctcacattgctcggttggtggtacga 1046

                                                                        
Query: 181  gcccgcgacacaaacacctgaggatatagcagcagctgcaaggatgaatgacttccacat 240
            ||||| ||| |||   ||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct: 1047 gcccgggacgcaagatcctgaagatgtagcagcagctgcaaggatgaatgatttccacat 1106

                                                                        
Query: 241  tgggtggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgt 300
            ||| ||||| ||||||||||||||| | || || || || || || ||||||||||||||
Sbjct: 1107 tggatggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgt 1166

                                                                        
Query: 301  tgggtccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttga 360
            |||||||||||||||||||||||| ||||||||    |||||||| ||||  || | |||
Sbjct: 1167 tgggtccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatga 1226

                                                                        
Query: 361  ttttgtcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctgga 420
            ||||||||||||||||||||| | ||||   | |||||  || || |||||||| || ||
Sbjct: 1227 ttttgtcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttga 1286

                                             
Query: 421  tcagaagctgagagattacatgggtgatgcagc 453
            |||||  || |||||||||||||| ||||||||
Sbjct: 1287 tcagagcctcagagattacatgggcgatgcagc 1319



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 545  tacaagaaccctgtggtcatgatccacgagaacggagc 582
            |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 1441 tacaagaaccctattgtcatgatccatgagaatggagc 1478
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>dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H08, full
            insert sequence
          Length = 2059

 Score =  315 bits (159), Expect = 1e-82
 Identities = 380/453 (83%), Gaps = 3/453 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcgatgctcattgcccttcgg---catcagttgcaacaatggcaactctaccacagagcc 60
            |||||||||||| ||||| ||   | |||||||  |||||||||||||||||||||||||
Sbjct: 824  gcgatgctcattcccctttggtgtcctcagttgtgacaatggcaactctaccacagagcc 883

                                                                        
Query: 61   ctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgtataaaga 120
             || |||||| | || |||||||| ||||||||| | || ||||||||||| || | |||
Sbjct: 884  atacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctctacagaga 943

                                                                        
Query: 121  gaagtaccaggacaagcaaggtggaaaaattggactcacattgctcggttcgtggaacaa 180
            ||||||||||| ||  ||||| ||| ||||||| |||||||||||||||| |||| || |
Sbjct: 944  gaagtaccaggccactcaaggaggacaaattgggctcacattgctcggttggtggtacga 1003

                                                                        
Query: 181  gcccgcgacacaaacacctgaggatatagcagcagctgcaaggatgaatgacttccacat 240
            ||||| ||| |||   ||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct: 1004 gcccgggacgcaagatcctgaagatgtagcagcagctgcaaggatgaatgatttccacat 1063

                                                                        
Query: 241  tgggtggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgt 300
            ||| ||||| ||||||||||||||| | || || || || || || ||||||||||||||
Sbjct: 1064 tggatggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgt 1123

                                                                        
Query: 301  tgggtccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttga 360
            |||||||||||||||||||||||| ||||||||    |||||||| ||||  || | |||
Sbjct: 1124 tgggtccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatga 1183

                                                                        
Query: 361  ttttgtcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctgga 420
            ||||||||||||||||||||| | ||||   | |||||  || || |||||||| || ||
Sbjct: 1184 ttttgtcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttga 1243

                                             
Query: 421  tcagaagctgagagattacatgggtgatgcagc 453
            |||||  || |||||||||||||| ||||||||
Sbjct: 1244 tcagagcctcagagattacatgggcgatgcagc 1276



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 545  tacaagaaccctgtggtcatgatccacgagaacggagc 582
            |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 1398 tacaagaaccctattgtcatgatccatgagaatggagc 1435
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>dbj|AK102869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111O12, full
            insert sequence
          Length = 1993

 Score =  307 bits (155), Expect = 2e-80
 Identities = 379/453 (83%), Gaps = 3/453 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcgatgctcattgcccttcgg---catcagttgcaacaatggcaactctaccacagagcc 60
            |||||||||||| ||||| ||   | |||||||  |||||||||||||||||||||||||
Sbjct: 758  gcgatgctcattcccctttggtgtcctcagttgtgacaatggcaactctaccacagagcc 817

                                                                        
Query: 61   ctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgtataaaga 120
             || |||||| | || |||||||| ||||||||| | || ||||||||||| || | |||
Sbjct: 818  atacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctctacagaga 877

                                                                        
Query: 121  gaagtaccaggacaagcaaggtggaaaaattggactcacattgctcggttcgtggaacaa 180
            ||||||||||| ||  ||||| ||| ||||||| |||||||||||||||| |||| || |
Sbjct: 878  gaagtaccaggccactcaaggaggacaaattgggctcacattgctcggttggtggtacga 937

                                                                        
Query: 181  gcccgcgacacaaacacctgaggatatagcagcagctgcaaggatgaatgacttccacat 240
            ||||| ||| |||   ||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct: 938  gcccgggacgcaagatcctgaagatgtagcagcagctgcaaggatgaatgatttccacat 997

                                                                        
Query: 241  tgggtggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgt 300
            ||| ||||| ||||||||||||||| | || || || || || || ||||||||||||||
Sbjct: 998  tggatggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgt 1057

                                                                        
Query: 301  tgggtccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttga 360
            |||||||||||||||||||||||| ||||||||    |||||||| ||||  || | |||
Sbjct: 1058 tgggtccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatga 1117

                                                                        
Query: 361  ttttgtcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctgga 420
            ||||||||||||||||||||| | ||||   | |||||  || || |||||||| || ||
Sbjct: 1118 ttttgtcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttga 1177

                                             
Query: 421  tcagaagctgagagattacatgggtgatgcagc 453
            |||||  || |||||||||||| | ||||||||
Sbjct: 1178 tcagagcctcagagattacatgagcgatgcagc 1210



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 545  tacaagaaccctgtggtcatgatccacgagaacggagc 582
            |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 1332 tacaagaaccctattgtcatgatccatgagaatggagc 1369
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0065A15, complete sequence
          Length = 168806

 Score =  135 bits (68), Expect = 2e-28
 Identities = 173/208 (83%)
 Strand = Plus / Minus

                                                                         
Query: 246   ggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgttgggt 305
             |||| ||||||||||||||| | || || || || || || |||||||||||||||||||
Sbjct: 72474 ggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgttgggt 72415

                                                                         
Query: 306   ccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttgattttg 365
             ||||||||||||||||||| ||||||||    |||||||| ||||  || | ||||||||
Sbjct: 72414 ccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatgattttg 72355

                                                                         
Query: 366   tcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctggatcaga 425
             |||||||||||||||| | ||||   | |||||  || || |||||||| || |||||||
Sbjct: 72354 tcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttgatcaga 72295

                                         
Query: 426   agctgagagattacatgggtgatgcagc 453
               || |||||||||||||| ||||||||
Sbjct: 72294 gcctcagagattacatgggcgatgcagc 72267



 Score =  103 bits (52), Expect = 7e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                         
Query: 137   caaggtggaaaaattggactcacattgctcggttcgtggaacaagcccgcgacacaaaca 196
             ||||| ||| ||||||| |||||||||||||||| |||| || |||||| ||| |||   
Sbjct: 72677 caaggaggacaaattgggctcacattgctcggttggtggtacgagcccgggacgcaagat 72618

                                                                 
Query: 197   cctgaggatatagcagcagctgcaaggatgaatgacttccacattgggtggt 248
             ||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 72617 cctgaagatgtagcagcagctgcaaggatgaatgatttccacattggatggt 72566



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 111/131 (84%), Gaps = 3/131 (2%)
 Strand = Plus / Minus

                                                                         
Query: 4     gcgatgctcattgcccttcgg---catcagttgcaacaatggcaactctaccacagagcc 60
             |||||||||||| ||||| ||   | |||||||  |||||||||||||||||||||||||
Sbjct: 72899 gcgatgctcattcccctttggtgtcctcagttgtgacaatggcaactctaccacagagcc 72840

                                                                         
Query: 61    ctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgtataaaga 120
              || |||||| | || |||||||| ||||||||| | || ||||||||||| || | |||
Sbjct: 72839 atacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctctacagaga 72780

                        
Query: 121   gaagtaccagg 131
             |||||||||||
Sbjct: 72779 gaagtaccagg 72769



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 252   tgcatcctttggtgcatggagattatcccccagtgatgagga 293
             |||||||||||||||| ||||| || || || ||||||||||
Sbjct: 99665 tgcatcctttggtgcacggagactaccctccggtgatgagga 99624



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 72    ctcaccatcttctgcttgcacatgcttcggcagtgtcc 109
             ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 90796 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 90759



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 545   tacaagaaccctgtggtcatgatccacgagaa 576
             |||||||||||| | ||||||||||| |||||
Sbjct: 71917 tacaagaaccctattgtcatgatccatgagaa 71886
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  135 bits (68), Expect = 2e-28
 Identities = 173/208 (83%)
 Strand = Plus / Minus

                                                                            
Query: 246      ggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgttgggt 305
                |||| ||||||||||||||| | || || || || || || |||||||||||||||||||
Sbjct: 19589399 ggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgttgggt 19589340

                                                                            
Query: 306      ccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttgattttg 365
                ||||||||||||||||||| ||||||||    |||||||| ||||  || | ||||||||
Sbjct: 19589339 ccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatgattttg 19589280

                                                                            
Query: 366      tcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctggatcaga 425
                |||||||||||||||| | ||||   | |||||  || || |||||||| || |||||||
Sbjct: 19589279 tcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttgatcaga 19589220

                                            
Query: 426      agctgagagattacatgggtgatgcagc 453
                  || |||||||||||||| ||||||||
Sbjct: 19589219 gcctcagagattacatgggcgatgcagc 19589192



 Score =  103 bits (52), Expect = 7e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                            
Query: 137      caaggtggaaaaattggactcacattgctcggttcgtggaacaagcccgcgacacaaaca 196
                ||||| ||| ||||||| |||||||||||||||| |||| || |||||| ||| |||   
Sbjct: 19589602 caaggaggacaaattgggctcacattgctcggttggtggtacgagcccgggacgcaagat 19589543

                                                                    
Query: 197      cctgaggatatagcagcagctgcaaggatgaatgacttccacattgggtggt 248
                ||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 19589542 cctgaagatgtagcagcagctgcaaggatgaatgatttccacattggatggt 19589491



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 111/131 (84%), Gaps = 3/131 (2%)
 Strand = Plus / Minus

                                                                            
Query: 4        gcgatgctcattgcccttcgg---catcagttgcaacaatggcaactctaccacagagcc 60
                |||||||||||| ||||| ||   | |||||||  |||||||||||||||||||||||||
Sbjct: 19589824 gcgatgctcattcccctttggtgtcctcagttgtgacaatggcaactctaccacagagcc 19589765

                                                                            
Query: 61       ctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgtataaaga 120
                 || |||||| | || |||||||| ||||||||| | || ||||||||||| || | |||
Sbjct: 19589764 atacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctctacagaga 19589705

                           
Query: 121      gaagtaccagg 131
                |||||||||||
Sbjct: 19589704 gaagtaccagg 19589694



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 252      tgcatcctttggtgcatggagattatcccccagtgatgagga 293
                |||||||||||||||| ||||| || || || ||||||||||
Sbjct: 19616590 tgcatcctttggtgcacggagactaccctccggtgatgagga 19616549



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 72       ctcaccatcttctgcttgcacatgcttcggcagtgtcc 109
                ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 19607721 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 19607684



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 545      tacaagaaccctgtggtcatgatccacgagaa 576
                |||||||||||| | ||||||||||| |||||
Sbjct: 19588842 tacaagaaccctattgtcatgatccatgagaa 19588811
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>dbj|AK066336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063O11, full
           insert sequence
          Length = 1919

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                       
Query: 221 aggatgaatgacttccacattgggtggtatatgcatcctttggtgcatggagattatccc 280
           ||||||||||| ||||| ||||| |||| | |||||||||||||||| ||||| || || 
Sbjct: 871 aggatgaatgaattccatattggatggtttttgcatcctttggtgcacggagactaccct 930

                        
Query: 281 ccagtgatgagga 293
           || ||||||||||
Sbjct: 931 ccggtgatgagga 943
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>dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038B10, full
           insert sequence
          Length = 2126

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 221 aggatgaatgacttccacattgggtggtatatgcatcctttggtgcatggaga 273
           ||||||||||| ||||| ||||| |||| |||| ||||| |||||||||||||
Sbjct: 874 aggatgaatgaattccatattggatggtttatgaatcctctggtgcatggaga 926



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 72  ctcaccatcttctgcttgcacatgcttcggcagtgtcc 109
           ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 715 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 752
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>gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, complete sequence
          Length = 192643

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 416   ctggatcagaagctgagagattacatg 442
             ||||| |||||||||||||||||||||
Sbjct: 43112 ctggaacagaagctgagagattacatg 43138
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>gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, complete sequence
          Length = 219617

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 416  ctggatcagaagctgagagattacatg 442
            ||||| |||||||||||||||||||||
Sbjct: 1687 ctggaacagaagctgagagattacatg 1713
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>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1399_D07, complete sequence
          Length = 65000

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 252   tgcatcctttggtgcatggagattatcccccagtgatgagga 293
             |||||||||||||||| ||||| || || || ||||||||||
Sbjct: 26072 tgcatcctttggtgcacggagactaccctccggtgatgagga 26031



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 72    ctcaccatcttctgcttgcacatgcttcggcagtgtcc 109
             ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 17203 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 17166
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>ref|XM_803631.1| Trypanosoma cruzi strain CL Brener protein kinase
            (Tc00.1047053507683.40) partial mRNA
          Length = 3648

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 194  acacctgaggatatagcagcagctg 218
            |||||||||||||| ||||||||||
Sbjct: 3436 acacctgaggatatggcagcagctg 3460
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>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
              Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes and
              two CpG islands, complete sequence
          Length = 187709

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 477    tttttgacttaaagaaccagt 497
              |||||||||||||||||||||
Sbjct: 182157 tttttgacttaaagaaccagt 182137
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>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence
          Length = 182241

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   agctgaagagagtgcttgggt 353
             |||||||||||||||||||||
Sbjct: 10870 agctgaagagagtgcttgggt 10850
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>gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, complete sequence
          Length = 152440

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   agctgaagagagtgcttgggt 353
             |||||||||||||||||||||
Sbjct: 49389 agctgaagagagtgcttgggt 49409
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>gb|AC154136.13| Mus musculus  BAC RP23-184A3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 220233

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 414    agctggatcagaagctgagag 434
              |||||||||||||||||||||
Sbjct: 179638 agctggatcagaagctgagag 179658
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>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete
             sequence
          Length = 147788

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   agctgaagagagtgcttgggt 353
             |||||||||||||||||||||
Sbjct: 69176 agctgaagagagtgcttgggt 69196
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>gb|AC165118.3| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16788057J9, complete
             sequence
          Length = 40531

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   aagctggatcagaagctgag 432
             ||||||||||||||||||||
Sbjct: 16510 aagctggatcagaagctgag 16529
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>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence
          Length = 87839

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 523   gctggagcatctccaggtcaaata 546
             ||||||||||||||||| ||||||
Sbjct: 75311 gctggagcatctccaggccaaata 75334
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>emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, complete sequence
          Length = 148950

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     accacagagccctatatagt 69
              ||||||||||||||||||||
Sbjct: 104203 accacagagccctatatagt 104222
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>gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complete sequence
          Length = 194266

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   cagaagctgagagattacat 441
             ||||||||||||||||||||
Sbjct: 98608 cagaagctgagagattacat 98627
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>gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete sequence
          Length = 191541

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    aagctggatcagaagctgag 432
              ||||||||||||||||||||
Sbjct: 170175 aagctggatcagaagctgag 170194
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>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete
             sequence
          Length = 215154

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ctgtataaagagaagtacca 129
             ||||||||||||||||||||
Sbjct: 40778 ctgtataaagagaagtacca 40797
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>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence
          Length = 216370

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ctgtataaagagaagtacca 129
              ||||||||||||||||||||
Sbjct: 164580 ctgtataaagagaagtacca 164599
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>gb|AC167922.2| Mycosphaerella graminicola clone JGIBBWB-5J8, complete sequence
          Length = 40667

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   aggctaccatctttcactgc 327
             ||||||||||||||||||||
Sbjct: 37077 aggctaccatctttcactgc 37058
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>emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on chromosome 4, complete
             sequence
          Length = 216944

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 404   gatcttagcaagctggatcagaag 427
             ||||||||||||||| ||||||||
Sbjct: 99441 gatcttagcaagctgtatcagaag 99418


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,544,971
Number of Sequences: 3902068
Number of extensions: 5544971
Number of successful extensions: 108679
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108547
Number of HSP's gapped (non-prelim): 122
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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