| Clone Name | bags39g08 |
|---|---|
| Clone Library Name | barley_pub |
>ACCD_MYCTU (P63405) Putative acetyl-coenzyme A carboxylase carboxyl| transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) Length = 495 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2 Query: 35 STPVAFPLASSRLFSTDASGAVAGSQDDSSSGEGHTYGR 151 S P+A P+A S A+ A G+ + +GEG +GR Sbjct: 24 SEPLAVPVADSYARELAAARAATGADESVQTGEGRVFGR 62
>ACCD_MYCBO (P63406) Putative acetyl-coenzyme A carboxylase carboxyl| transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) Length = 495 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2 Query: 35 STPVAFPLASSRLFSTDASGAVAGSQDDSSSGEGHTYGR 151 S P+A P+A S A+ A G+ + +GEG +GR Sbjct: 24 SEPLAVPVADSYARELAAARAATGADESVQTGEGRVFGR 62
>NIFD_RHOCA (P08717) Nitrogenase molybdenum-iron protein alpha chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 499 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2 Query: 392 EHKISLNGKAVLLQGVPRSAQA----DDIERFLCGTNYEPPPFENFVRAG 529 ++K L GK+V+L PRSA DD+ + GT YE +++ R G Sbjct: 354 KYKPRLEGKSVMLYVRPRSAPRRHAYDDLGMVIAGTGYEFAHNDDYKRTG 403
>AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporter AGC1| (Aspartate-glutamate carrier 1) Length = 911 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 18 PGRAL-TRPQWHFPLHPLVSFQPTHPAP*RDHRTTHRPAK 134 P R L + PQ+ F L F PAP D TTHRP + Sbjct: 782 PARVLRSSPQFGFTLAAYEIFHNLFPAPRYDDSTTHRPTR 821
>ITB7_HUMAN (P26010) Integrin beta-7 precursor| Length = 798 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = -2 Query: 266 CNQSSHHPVTVHIGQGNG*CQSSACSCQDGR 174 CN S P H G G Q CSC GR Sbjct: 476 CNCSDTQPQAPHCSDGQGHLQCGVCSCAPGR 506
>G3PA_ARATH (P25856) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast| precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 396 Score = 29.6 bits (65), Expect = 6.2 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Frame = +2 Query: 17 SGARSYSTPVAF--PLASSRL-----FSTDASGAVAGSQDDSSSGEGHTYGRFYTNISGV 175 SG RS S + F L+S F T A G+ G + +G T + I+G Sbjct: 16 SGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSGGYR------KGVTEAKLKVAINGF 69 Query: 176 GRLGKNMLKTDIIHYLDQCELSLDDVKIDYNKGFYPMGALLKFPS 310 GR+G+N L+ + + + LD + I+ G LLK+ S Sbjct: 70 GRIGRNFLRC----WHGRKDSPLDIIAINDTGGVKQASHLLKYDS 110
>PLCG1_HUMAN (P19174) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1290 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 6/66 (9%) Frame = +2 Query: 41 PVAFPLASSRLFSTDASGAVAGSQDD------SSSGEGHTYGRFYTNISGVGRLGKNMLK 202 P F L SS+++ ++ + + G++D+ SSS E H+ +++ G GR G+++ + Sbjct: 507 PHYFVLTSSKIYYSEETSSDQGNEDEEEPKEVSSSTELHSNEKWFHGKLGAGRDGRHIAE 566 Query: 203 TDIIHY 220 + Y Sbjct: 567 RLLTEY 572
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III| Length = 547 Score = 29.3 bits (64), Expect = 8.1 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = -1 Query: 483 PHKKRSMSSA*ALRGTPCNSTAFPFKDILCSHTSGLTLSSLYMRP*IVCLSAASNDSTEG 304 P K + ++A +RG S FPF H+ T++ + P LS+ N + Sbjct: 143 PADKANNTTATDVRGNTATSPYFPFSRSPGRHSGNSTINGMMTTPNF--LSSGVNSRSVD 200 Query: 303 NFNNAPMG 280 FNN+ G Sbjct: 201 EFNNSSSG 208
>XYNA_CLOSR (P33558) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) Length = 512 Score = 29.3 bits (64), Expect = 8.1 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 17 SGARSYSTPVAFPLASSRLFSTDA-SGAVAGSQDDSSSGEGHTYGRFYTNISGV 175 SGA +S VA + +S +D+ +G + G+ SS+G +TY TNIS + Sbjct: 296 SGATGFSATVATEVNTSIQIRSDSPTGTLLGTLYVSSTGSWNTYQTVSTNISKI 349
>PLCG1_MOUSE (Q62077) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1302 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 6/66 (9%) Frame = +2 Query: 41 PVAFPLASSRLFSTDASGAVAGSQDD------SSSGEGHTYGRFYTNISGVGRLGKNMLK 202 P F L SS+++ ++ + + G++D+ SSS E H+ +++ G GR G+++ + Sbjct: 507 PHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASSSTELHSSEKWFHGKLGAGRDGRHIAE 566 Query: 203 TDIIHY 220 + Y Sbjct: 567 RLLTEY 572 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,761,615 Number of Sequences: 219361 Number of extensions: 1873411 Number of successful extensions: 5356 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4987 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5331 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)