ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags38p07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ5B_MOUSE (Q9CQ94) DnaJ homolog subfamily C member 5B (Beta cy... 28 5.5
2DNJ5B_HUMAN (Q9UF47) DnaJ homolog subfamily C member 5B (Beta cy... 28 5.5

>DNJ5B_MOUSE (Q9CQ94) DnaJ homolog subfamily C member 5B (Beta cysteine string|
           protein) (Beta-CSP)
          Length = 199

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 41  TGCHXKLFLCWLCCPEKLC*GHC 109
           TGC+   F C LCC    C GHC
Sbjct: 121 TGCY---FCCCLCCCCNCCCGHC 140



to top

>DNJ5B_HUMAN (Q9UF47) DnaJ homolog subfamily C member 5B (Beta cysteine string|
           protein) (Beta-CSP)
          Length = 199

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 41  TGCHXKLFLCWLCCPEKLC*GHC 109
           TGC+   F C LCC    C GHC
Sbjct: 121 TGCY---FCCCLCCCCNCCCGHC 140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,828,458
Number of Sequences: 219361
Number of extensions: 80579
Number of successful extensions: 217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 80,573,946
effective HSP length: 11
effective length of database: 78,160,975
effective search space used: 1875863400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top