ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39e04 |
|---|---|
| Clone Library Name | barley_pub |
>YMCB_BACSU (O31778) Hypothetical UPF0004 protein ymcB| Length = 509 Score = 50.4 bits (119), Expect = 5e-06 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSRELTSVFEAFS--PY 196 F ET++L +E + + + PR GTPAA+MK VP K+R + L ++ S Sbjct: 380 FEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVKKERLQRLNALVNEISAKKM 439 Query: 197 EGLKGKVERIWIT-EIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + +GKV + + E + L G+T+ V P +G KI WS+ G Sbjct: 440 KEYEGKVVEVLVEGESKNNPDILAGYTEKSKLVNFKGPKEAIGKIVRVKIQQAKTWSLDG 499 Query: 374 EVIEGTIAVK 403 E++ I VK Sbjct: 500 EMVGEAIEVK 509
>Y1875_PYRHO (O59545) Hypothetical UPF0004 protein PH1875| Length = 425 Score = 49.7 bits (117), Expect = 9e-06 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%) Frame = +2 Query: 20 KXFVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYE 199 + F +V LIK + +V++S++ PRPGT AA+ K++P VK+RSR L + S YE Sbjct: 305 EAFQRSVELIKRIRPDKVNVSRYSPRPGTIAAKWKQLPGWVVKERSRLLHRIRLQIS-YE 363 Query: 200 GLKGKVERIWITEIATDGVHLVGHTKGYIQVL------VIAPDSMLGTSADAKITSVGRW 361 + R +I + +H G KG + + +I P+ G +A++ + Sbjct: 364 -----INRKYIGKKVKVLIHGEG-KKGNVDAVTMNYKHIILPEGRKGEFREARVKNAAST 417 Query: 362 SVFGEVI 382 + GE+I Sbjct: 418 YLLGEII 424
>YQEV_BACSU (P54462) Hypothetical UPF0004 protein yqeV| Length = 451 Score = 46.6 bits (109), Expect = 8e-05 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVK-KRSRELTSVF-----EAF 187 F+ET N IKE++ ++H+ + R GTPAARM+ VK +R L ++ E Sbjct: 312 FMETYNFIKEHKFSELHVFPYSKRTGTPAARMEDQVDENVKNERVHRLIALSDQLAKEYA 371 Query: 188 SPYEGLKGKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVG 355 S YE ++ + + VG+T Y++V+ + M+G KI G Sbjct: 372 SQYENEVLEIIPEEAFKETEEENMFVGYTDNYMKVVFKGTEDMIGKIVKVKILKAG 427
>Y1247_ARCFU (O29021) Hypothetical UPF0004 protein AF1247| Length = 405 Score = 44.7 bits (104), Expect = 3e-04 Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = +2 Query: 20 KXFVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYE 199 + F ++ LIKE + V+I+++ R GTPAAR++ +P K+RSR+LT + Sbjct: 282 EAFWKSYELIKETRPDIVNITRYSARKGTPAARLRDIPGWIKKERSRKLTDLMRKIGLEN 341 Query: 200 GLK--GKVERIWITEIATDGVHL 262 + GK R+ +T+ +G +L Sbjct: 342 NKRFVGKKLRVLVTKEGKNGRNL 364
>Y284_AQUAE (O66638) Hypothetical UPF0004 protein aq_284| Length = 440 Score = 44.3 bits (103), Expect = 4e-04 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 6/126 (4%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSREL-----TSVFEAF 187 F T++++K+ + QV +F PRPGTPAA M+ ++P +R R L + + E Sbjct: 317 FEHTLDVLKKVRFEQVFSFKFSPRPGTPAAEMEGQIPDDVKTERMRRLLELQKSILSEIA 376 Query: 188 SPYEGLKGKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSV 367 YEG +V + E +G L+G T S+LG K+ +S+ Sbjct: 377 KKYEGTVQEV----LVEEEKNG-ELIGRTTTNKWASFKGDPSLLGKIVKIKVIKSSPFSL 431 Query: 368 FGEVIE 385 GE++E Sbjct: 432 EGELLE 437
>Y1729_PYRAB (Q9UXX9) Hypothetical UPF0004 protein PYRAB17290| Length = 425 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 5/71 (7%) Frame = +2 Query: 20 KXFVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSV-----FEA 184 + F +V LI+ + +V++S++ PRPGT AA+ K++P VK+RSR L + +E Sbjct: 305 EAFQRSVELIRRIRPDKVNVSRYSPRPGTIAAKWKQLPGWIVKERSRLLHRIRLQISYEI 364 Query: 185 FSPYEGLKGKV 217 Y G K +V Sbjct: 365 NQKYIGKKVEV 375
>Y996_SYNY3 (P73127) Hypothetical UPF0004 protein sll0996| Length = 451 Score = 43.1 bits (100), Expect = 8e-04 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVK----KRSRELTSVFEAFSP 193 F T+NLI+E ++ + + PRPGTPAA S EVK +R L S +A Sbjct: 323 FENTLNLIEEVGFDLLNTAAYSPRPGTPAAFWDNQLSEEVKGDRLQRLNHLVST-QAMER 381 Query: 194 YEGLKGKVERIWIT-EIATDGVHLVGHTKGYIQVLVIAPDS-MLGTSADAKITSVGRWSV 367 + G+VE + + E ++G T+G S +LG + KIT +S+ Sbjct: 382 SQRYLGRVEEVLVEGENLKSPGQVMGRTRGNRLTFFQGEISELLGKTVPVKITEARAFSL 441 Query: 368 FGEVI 382 GE + Sbjct: 442 TGEAL 446
>Y830_THEMA (Q9WZT7) Hypothetical UPF0004 protein TM0830| Length = 434 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKR 154 F T+ L+++ + +VHI +F PRPGTPA+RM+ VP + K+R Sbjct: 305 FQRTLELVEKVEFSRVHIFRFSPRPGTPASRMEGGVPESKKKER 348
>Y1001_PASMU (Q9L699) Hypothetical UPF0004 protein PM1001| Length = 474 Score = 40.4 bits (93), Expect = 0.005 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 6/154 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKR-----SRELTSVFEAFS 190 F +T+NLI + + RPGTPAA M + E KK+ + + + FS Sbjct: 318 FEQTMNLIAQVNFDMSFSFIYSARPGTPAADMPDDVTEEEKKQRLYVLQQRINNQAAQFS 377 Query: 191 PYEGLKGKVERIWIT-EIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSV 367 + G +R+ + D + L G T+ V + M+G D KIT V S+ Sbjct: 378 --RAMLGTEQRVLVEGPSKKDLMELTGRTETNRIVNFVGTPDMIGKFVDIKITDVFTNSL 435 Query: 368 FGEVIEGTIAVKEAALQQNSAEVQVENRPNRVEE 469 GEV+ ++ L+ + V NR + +E Sbjct: 436 RGEVVR---TEEQMGLRVVQSPQMVINRTRKEDE 466
>Y808_RICPR (Q9ZCE8) Hypothetical UPF0004 protein RP808| Length = 445 Score = 38.9 bits (89), Expect = 0.016 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAA-RMKKVPSIEVKKR----SRELTSVFEAFS 190 F +T++L+ + Q + ++ PRPGTP A R ++P KR +EL + AF+ Sbjct: 323 FEDTLDLVHRVKYGQCYSFKYSPRPGTPGAIRTDQIPEHIKSKRLTILQQELATQQLAFN 382 Query: 191 PYEGLKGKVERIWITEIATDGVHLVGHTKGYIQVLVIAPD-SMLGTSADAKITSVGRWSV 367 + G R+ ++G T V + P+ S+LG D IT S+ Sbjct: 383 --QSCVGSTMRVLFDRDGKFEDQIIGKTPYMQSVYIHNPNKSLLGKIVDVIITKAALNSL 440 Query: 368 FGEVI 382 GE++ Sbjct: 441 TGEIL 445
>Y826_METTH (O26914) Hypothetical UPF0004 protein MTH826| Length = 424 Score = 38.5 bits (88), Expect = 0.021 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYEG- 202 F++T +L++E + +H+S++ RP ++ + ++ E+++RSR L + + E Sbjct: 309 FMDTCSLLEEVKPSFIHLSKYRHRPRARSSSLDEIDFRELRRRSRALEELKMRITEEENR 368 Query: 203 -LKGKVERIWITEIATDGVHLVGHTKGYIQVL 295 L G + I + E G +G T YI V+ Sbjct: 369 RLVGSFQEILVVERGRKG-GFIGRTGSYIPVV 399
>Y019_HAEIN (Q57163) Hypothetical UPF0004 protein HI0019| Length = 474 Score = 37.7 bits (86), Expect = 0.035 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 4/152 (2%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARM-KKVPSIEVKKRSRELTSVF--EAFSPY 196 F +T+NLI + + RPGTPAA M V E K+R L +A Sbjct: 318 FEQTMNLIAQVNFDMSFSFVYSARPGTPAADMPDDVTEDEKKQRLYVLQERINQQAAQFS 377 Query: 197 EGLKGKVERIWIT-EIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + G +R+ + D + L G T+ V M+G D KIT V S+ G Sbjct: 378 RRMLGTEQRVLVEGPSKKDIMELTGRTETNRIVNFQGSPEMIGKFVDVKITDVYTNSLRG 437 Query: 374 EVIEGTIAVKEAALQQNSAEVQVENRPNRVEE 469 EV+ E L+ + +V NR + +E Sbjct: 438 EVVR---TEDEMGLRIAQSPQEVMNRTRKEDE 466
>Y416_RICPR (Q9ZDB6) Hypothetical UPF0004 protein RP416| Length = 421 Score = 37.4 bits (85), Expect = 0.046 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSREL 166 F T LI E +L +H+ + R GTPAARM +VP K+R++ L Sbjct: 308 FENTRKLILEAELQYLHVFPYSEREGTPAARMPQVPQNIRKERAKIL 354
>YLEA_ECOLI (P0AEI1) Hypothetical UPF0004 protein yleA| Length = 474 Score = 37.0 bits (84), Expect = 0.061 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARM-KKVPSIEVKKRSRELTSVF--EAFSPY 196 F +T+ LI + + F RPGTPAA M VP E K+R L +A + Sbjct: 318 FEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWS 377 Query: 197 EGLKGKVERIWITEIATDGV-HLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + G +RI + + + L G T+ V M+G D +IT V S+ G Sbjct: 378 RRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRG 437 Query: 374 EVI 382 +V+ Sbjct: 438 KVV 440
>YLEA_ECOL6 (P0AEI2) Hypothetical UPF0004 protein yleA| Length = 474 Score = 37.0 bits (84), Expect = 0.061 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARM-KKVPSIEVKKRSRELTSVF--EAFSPY 196 F +T+ LI + + F RPGTPAA M VP E K+R L +A + Sbjct: 318 FEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWS 377 Query: 197 EGLKGKVERIWITEIATDGV-HLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + G +RI + + + L G T+ V M+G D +IT V S+ G Sbjct: 378 RRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRG 437 Query: 374 EVI 382 +V+ Sbjct: 438 KVV 440
>YLEA_ECO57 (P0AEI3) Hypothetical UPF0004 protein yleA| Length = 474 Score = 37.0 bits (84), Expect = 0.061 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARM-KKVPSIEVKKRSRELTSVF--EAFSPY 196 F +T+ LI + + F RPGTPAA M VP E K+R L +A + Sbjct: 318 FEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWS 377 Query: 197 EGLKGKVERIWITEIATDGV-HLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + G +RI + + + L G T+ V M+G D +IT V S+ G Sbjct: 378 RRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRG 437 Query: 374 EVI 382 +V+ Sbjct: 438 KVV 440
>Y16R_MYCIO (Q49573) Hypothetical UPF0004 protein in 16S RNA 5'region| Length = 438 Score = 34.7 bits (78), Expect = 0.30 Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 3/130 (2%) Frame = +2 Query: 5 TRNPMKXFVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEA 184 T K ++ +N IK Y + HI + R T ++ K + K R +E+T + Sbjct: 313 TDEDQKKSIDFLNKIKLYDM---HIFPYSKRNNTRSSHYKDINDSTKKDRVKEITKL-NY 368 Query: 185 FSPYEGLK---GKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVG 355 + E LK GK + + D G++ Y +V+V + D++ +I + Sbjct: 369 LNKKENLKKYIGKTCEVLFEKKKEDEKMWSGYSNEYCRVMVESGDNLENKMLKVRIKKIF 428 Query: 356 RWSVFGEVIE 385 S+ GE+I+ Sbjct: 429 FDSLVGEIID 438
>Y426_BUCAP (Q8K9C2) Hypothetical UPF0004 protein BUsg426| Length = 439 Score = 33.9 bits (76), Expect = 0.51 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSRELTSVF--EAFSPY 196 F +T+N IK+ + RPGTPA+ MK + E KKR L + + S Sbjct: 317 FQKTINFIKKINFDMSFSFIYSSRPGTPASEMKDNIDLQEKKKRLYTLQNCINKQTMSWS 376 Query: 197 EGLKGKVERIWITEIATDGV-HLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + + + + ++ + L G T+ V M+G KI V S+ G Sbjct: 377 RKMLKSTQSVLVEGVSKKNIMELYGKTENNRIVTFKGSHKMIGKFIKLKIKKVHTHSLQG 436 Query: 374 EVI 382 E+I Sbjct: 437 ELI 439
>Y441_BUCAI (P57516) Hypothetical UPF0004 protein BU441| Length = 439 Score = 33.5 bits (75), Expect = 0.67 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 6/124 (4%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYEGL 205 F +T+ IK + RPGTPA+ M +++K++ R L + E + L Sbjct: 317 FEKTIEFIKNINFDMSFSFIYSARPGTPASNMN--DDLDLKEKKRRLYILQERINIQTML 374 Query: 206 KGKVERIWITEIATDGV------HLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSV 367 + I + +GV L G T+ V M+G + KI V S+ Sbjct: 375 WSRKMFGSIQSVLVEGVSDKNIMDLYGRTENNRVVTFQGSSKMIGQFVNVKIKKVHTHSL 434 Query: 368 FGEV 379 GE+ Sbjct: 435 KGEL 438
>Y867_METJA (Q58277) Hypothetical UPF0004 protein MJ0867| Length = 427 Score = 33.5 bits (75), Expect = 0.67 Identities = 27/119 (22%), Positives = 55/119 (46%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYEGL 205 F T+ +++E + +H +++ R GT AA+MK++ + +++KR E+ Y Sbjct: 314 FQNTLEVLRELKPDYIHGAKYSQRKGTEAAKMKQIDT-KIRKRRSEILDKLRRELSYLNN 372 Query: 206 KGKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFGEVI 382 K + + + +G G+T + +V +G KIT + + GE+I Sbjct: 373 KKYIGKAMKVLVLDEG---KGYTDNF--KVVKFEGGEVGEFRKVKITDAKTFGLKGELI 426
>CWC15_EMENI (Q5B020) Pre-mRNA-splicing factor cwc15| Length = 232 Score = 33.1 bits (74), Expect = 0.87 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Frame = +2 Query: 521 VESVAQQCTPQR-CEGPSDAPANYGDATRQETPQSTLVR-----RNVDGAGKTSESDAEK 682 V + + TP+R EG APAN GD +E P++ R R +D + SE D+ + Sbjct: 72 VPEASAESTPKRQLEG---APANGGDGELEEDPEAKRRRILEETREIDADSEASEEDSSE 128 Query: 683 SRGDD 697 DD Sbjct: 129 DESDD 133
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 33.1 bits (74), Expect = 0.87 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%) Frame = -3 Query: 474 TASSTRFGLFSTCTSAEFC*SAASFTAMVPSITS------PNTDHLPTDVIFASADVPSI 313 +ASST +ST TS S+ + + PS TS +T L + + +S V Sbjct: 283 SASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSISSTFTDSTSSLGSSIASSSTSVS-- 340 Query: 312 LSGAMTRTWIYPLVCPTR*TPSVAISVIHILSTLPFSPSYGEKASKTDVNSRLRFFTSML 133 L T + P TPS+ S + T S S E +K+ +++ + F+ + Sbjct: 341 LYSPSTPVYSVPSTSSNVATPSMTSSTV---ETTVSSQSSSEYITKSSISTTIPSFS--M 395 Query: 132 GTFFILAAGV 103 T+F +GV Sbjct: 396 STYFTTVSGV 405
>Y392_BUCBP (Q89AC2) Hypothetical UPF0004 protein bbp_392| Length = 445 Score = 33.1 bits (74), Expect = 0.87 Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 4/120 (3%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSRELTSVFEAFSPY-- 196 F +T+ LIK+ + + + PRPGTPA+ ++ V E +KR L ++ + Sbjct: 319 FEQTLQLIKDLNIDMSYSFIYSPRPGTPASELQDNVTLCEKQKRLHILQTLIRNNTTMWN 378 Query: 197 EGLKGKVERIWIT-EIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFG 373 + + G ++ + + + L G T+ V +M+G + KIT + S+ G Sbjct: 379 QKMLGSIQSVLVEGRSQKNPKELFGRTENNRIVNFKGNQNMIGEFINLKITKINPNSLRG 438
>SPRC_RAT (P16975) SPARC precursor (Secreted protein acidic and rich in| cysteine) (Osteonectin) (ON) (Basement-membrane protein 40) (BM-40) Length = 302 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Frame = +2 Query: 374 EVIEGTIAVKEAALQQNSAEVQVE------NRPNRVEEAVCSTNTCDSDSCACSGVESVA 535 E++ V+E L + VQVE VEE V N C + C V + Sbjct: 26 EMVAEETVVEETGLPVGANPVQVEMGEFEEGAEETVEEVVACNNPCQNHHCKHGKVCELD 85 Query: 536 QQCTPQ-RCEGPSDAPANYGD 595 + TP C+ P+ PA G+ Sbjct: 86 ESNTPMCVCQDPTSCPAPIGE 106
>OM6_CHLPS (P23701) 60 kDa outer membrane protein precursor (Cysteine-rich| outer membrane protein) (CRP) (60 kDa cysteine-rich OMP) Length = 557 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/92 (23%), Positives = 36/92 (39%) Frame = +2 Query: 290 VLVIAPDSMLGTSADAKITSVGRWSVFGEVIEGTIAVKEAALQQNSAEVQVENRPNRVEE 469 V V+A SM + A KI + S+ I T + Q + +V+ N+ +E Sbjct: 9 VTVLALTSMASSFASGKIEAAAAESLATRFIASTENADDNVFQATAKKVRFGRNKNQRQE 68 Query: 470 AVCSTNTCDSDSCACSGVESVAQQCTPQRCEG 565 + CD + C G + T + C G Sbjct: 69 QKHTEAFCDKEFYPCEGGQCQPVDATQESCYG 100
>Y989_MYCLE (Q49842) Hypothetical UPF0004 protein ML0989| Length = 517 Score = 32.0 bits (71), Expect = 1.9 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARM-KKVPSIEVKKRSRELTSVFEAFSPYEG 202 F T++++++ + Q+ RPGTPAA + ++P V++R L + E E Sbjct: 339 FAATLDVVRQVRFTAAFTFQYSKRPGTPAAELGGQLPKAVVQERYERLVELQEQICMEEN 398 Query: 203 --LKGKVERIWIT 235 L G++ + +T Sbjct: 399 RVLIGRIVELLVT 411
>Y474_AQUAE (O66772) Hypothetical UPF0004 protein aq_474| Length = 410 Score = 31.6 bits (70), Expect = 2.5 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSRELTSVFEAFSP--Y 196 F ET +K + +HI + RP T A+++K K+P K+R R L + + Y Sbjct: 309 FQETYEFLKRIPISYMHIFPYSDRPFTKASKLKPKLPERIKKERVRILKELDQKKRQEFY 368 Query: 197 EGLKGKVERIWITE 238 E KGK R + E Sbjct: 369 EKNKGKELRALVIE 382
>Y2752_MYCBO (P67086) Hypothetical UPF0004 protein Mb2752c| Length = 512 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSRELTSVFEAFS 190 F T+++++ + Q+ RPGTPAA++ ++P V++R L ++ E S Sbjct: 343 FAATLDVVRRARFAAAFTFQYSKRPGTPAAQLDGQLPKAVVQERYERLIALQEQIS 398
>Y2733_MYCTU (P67085) Hypothetical UPF0004 protein Rv2733c/MT2803| Length = 512 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +2 Query: 26 FVETVNLIKEYQLPQVHISQFYPRPGTPAARMK-KVPSIEVKKRSRELTSVFEAFS 190 F T+++++ + Q+ RPGTPAA++ ++P V++R L ++ E S Sbjct: 343 FAATLDVVRRARFAAAFTFQYSKRPGTPAAQLDGQLPKAVVQERYERLIALQEQIS 398
>VATD_METJA (Q58032) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 216 Score = 30.4 bits (67), Expect = 5.7 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +2 Query: 296 VIAPDSMLGTSADAKITSVGRWSVFGEVIEGTIAVKEAALQQNSAEVQVE 445 +I S L +AK+ + + + + GT+AVKEAAL + +++V+ Sbjct: 42 IIEQASDLRDKVEAKLAEAYKDLIMAQTVMGTLAVKEAALAAKNDKLEVD 91
>SWR1_CANAL (Q59U81) Helicase SWR1 (EC 3.6.1.-)| Length = 1641 Score = 30.4 bits (67), Expect = 5.7 Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 20/131 (15%) Frame = +2 Query: 374 EVIEGTIAVKEAALQQN-SAEVQVENRPNRVEEAVCSTNTCDSDSCACSGVESVAQQCTP 550 E++E + + EA L + V+ E+ N NT DSD+ + S E + T Sbjct: 527 EMLEHSTQLLEAQLTSSREPTVEAESDDN---STTFDDNTNDSDNFSSSEEEENEEDNTQ 583 Query: 551 QRCEGPSDAPAN-------------------YGDATRQETPQSTLVRRNVDGAGKTSESD 673 Q+ G N Y D P S+ V + + +TS D Sbjct: 584 QQINGNKKYDVNGKSNDENDMSLSVEELRKKYADLETSVEPLSSNVTSDKERESETSSED 643 Query: 674 AEKSRGDDHQV 706 AE S DD V Sbjct: 644 AESSDDDDTDV 654
>IPDE_DICDI (P22549) Cyclic nucleotide phosphodiesterase inhibitor precursor| (PDI) Length = 237 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = +2 Query: 446 NRPNRVEEAVC--STNTCDSDSCACSGVESVAQQCT 547 NR N E C STNTCD + C G + QCT Sbjct: 196 NRNNGCETFTCNLSTNTCDYYAKNCGGWPCINNQCT 231
>Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980| Length = 446 Score = 30.0 bits (66), Expect = 7.4 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%) Frame = +2 Query: 20 KXFVETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYE 199 K F +T+ L+++ + RPGTPAA + EVKK+ ++ YE Sbjct: 316 KDFEQTMKLVEDVGFDFSFSFIYSARPGTPAADLADDLPEEVKKQRLQILQSRIHQQGYE 375 Query: 200 ---GLKGKVERIWITEIA-TDGVHLVGHTKGYIQVLVIAPDS--MLGTSADAKITSVGRW 361 + G +RI +T+ + D L G T+ +++ D+ ++G A I Sbjct: 376 ISRRMVGSTQRILVTDFSKKDPGMLQGRTENN-RIVNFRCDNPRLIGQFAQVHIDDALPH 434 Query: 362 SVFGEVIEGTI 394 S+ G +I+ T+ Sbjct: 435 SLRGTLIDSTL 445
>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 29.6 bits (65), Expect = 9.7 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 467 EAVCSTNTCDSDSCACSGVESVAQQCTPQR--CEGPSDAP 580 +++C TC +D +C G + C PQ C+G D P Sbjct: 2753 DSICGAVTCAADMFSCQG----SHACVPQHWLCDGERDCP 2788 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,717,849 Number of Sequences: 219361 Number of extensions: 2253331 Number of successful extensions: 6774 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6761 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
