ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39d22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY589583.1| Triticum aestivum alpha-expansin EXPA1 mRNA, complete cds Length = 965 Score = 450 bits (227), Expect = e-123 Identities = 270/283 (95%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 ggttcaccgtcaacggccacgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 584 Query: 61 tgggttccatccggtcggtgtccatcaaggggtcgcgcaccgggtggatgcccatgtcca 120 | || ||||||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 585 tcgggtccatccggtcggtgtccatcaaggggtccaggacggggtggatgcccatgtcca 644 Query: 121 ggaactggggggtcaactggcagtccaacgcgctgctcagcgggcagagcctctcgttcc 180 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 645 ggaactggggggtcaactggcagtccaacgcgctgctcaccggccagagcctctcgttcc 704 Query: 181 aggtcaccagcaccgacggccagacgatcaccttccccaacgtcgctcccgccggatggg 240 |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||| Sbjct: 705 aggtcaccagcaccgacggccacacgctcaccttccccaacgccgctcccgccggctggg 764 Query: 241 gcttcggccagaccttcgccaccaacaagcagttctcttaatt 283 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 gcttcggccagaccttcgccaccaacaagcagttctcttaatt 807
>gb|AF332171.1| Zea mays alpha-expansin 3 (expA3) mRNA, complete cds Length = 1031 Score = 218 bits (110), Expect = 2e-53 Identities = 203/234 (86%) Strand = Plus / Plus Query: 20 cgactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggt 79 ||||||||||||||| |||||| || ||| ||||||||| || ||||||| ||||| Sbjct: 591 cgactacttcgagctggtgctcatctccaatgtcggcggctgcgggtccatccagtcggc 650 Query: 80 gtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactg 139 ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| Sbjct: 651 gtccatcaaggggtcgcgcaccgggtggatggccatgtcccggaactggggcgtcaactg 710 Query: 140 gcagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacgg 199 ||||||||||||| |||| || |||||||| ||||||||||||||||||| |||||| Sbjct: 711 gcagtccaacgcgtacctcaatggccagagcctgtcgttccaggtcaccagcagcgacgg 770 Query: 200 ccagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagac 253 |||||| | ||||||||| ||||||| |||||| | ||||| ||||| ||||| Sbjct: 771 ccagaccaaaaccttccccgacgtcgcgcccgccagctgggggttcggtcagac 824
>ref|XM_474982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 786 Score = 216 bits (109), Expect = 6e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 21 gactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtg 80 |||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| Sbjct: 526 gactacttcgagctggtgctcgtctccaacgtcggcggcgtcggctccatccagtcggtg 585 Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 || |||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 586 tcgatcaaggggtcgaggaccgggtggatggccatgtccaggaattggggcgtcaactgg 645 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||||||||||| ||| ||| |||||||| |||||| |||||||||||| ||||||| Sbjct: 646 cagtccaacgcctacctcgacggccagagcctgtcgttcaaggtcaccagcagcgacggc 705 Query: 201 cagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| ||||||||| | ||||||| || || || ||| ||||||||||||||| | Sbjct: 706 cagacgctcaccttcctcgacgtcgccccggcgggctggacgttcggccagaccttctcg 765 Query: 261 accaacaagcagttctcttaa 281 ||| |||||||||||||| Sbjct: 766 acctcacagcagttctcttaa 786
>gb|AF394543.1| Oryza sativa alpha-expansin OsEXPA1 (EXPA1) gene, complete cds Length = 2637 Score = 216 bits (109), Expect = 6e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 21 gactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtg 80 |||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| Sbjct: 2138 gactacttcgagctggtgctcgtctccaacgtcggcggcgtcggctccatccagtcggtg 2197 Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 || |||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 2198 tcgatcaaggggtcgaggaccgggtggatggccatgtccaggaattggggcgtcaactgg 2257 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||||||||||| ||| ||| |||||||| |||||| |||||||||||| ||||||| Sbjct: 2258 cagtccaacgcctacctcgacggccagagcctgtcgttcaaggtcaccagcagcgacggc 2317 Query: 201 cagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| ||||||||| | ||||||| || || || ||| ||||||||||||||| | Sbjct: 2318 cagacgctcaccttcctcgacgtcgccccggcgggctggacgttcggccagaccttctcg 2377 Query: 261 accaacaagcagttctcttaa 281 ||| |||||||||||||| Sbjct: 2378 acctcacagcagttctcttaa 2398
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 216 bits (109), Expect = 6e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 21 gactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtg 80 |||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| Sbjct: 8557648 gactacttcgagctggtgctcgtctccaacgtcggcggcgtcggctccatccagtcggtg 8557707 Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 || |||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 8557708 tcgatcaaggggtcgaggaccgggtggatggccatgtccaggaattggggcgtcaactgg 8557767 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||||||||||| ||| ||| |||||||| |||||| |||||||||||| ||||||| Sbjct: 8557768 cagtccaacgcctacctcgacggccagagcctgtcgttcaaggtcaccagcagcgacggc 8557827 Query: 201 cagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| ||||||||| | ||||||| || || || ||| ||||||||||||||| | Sbjct: 8557828 cagacgctcaccttcctcgacgtcgccccggcgggctggacgttcggccagaccttctcg 8557887 Query: 261 accaacaagcagttctcttaa 281 ||| |||||||||||||| Sbjct: 8557888 acctcacagcagttctcttaa 8557908
>emb|Y07782.1|OSEXPANSI Oryza sativa expansin (Os-EXP-1) mRNA, complete cds Length = 1081 Score = 216 bits (109), Expect = 6e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 21 gactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtg 80 |||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| Sbjct: 538 gactacttcgagctggtgctcgtctccaacgtcggcggcgtcggctccatccagtcggtg 597 Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 || |||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 598 tcgatcaaggggtcgaggaccgggtggatggccatgtccaggaattggggcgtcaactgg 657 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||||||||||| ||| ||| |||||||| |||||| |||||||||||| ||||||| Sbjct: 658 cagtccaacgcctacctcgacggccagagcctgtcgttcaaggtcaccagcagcgacggc 717 Query: 201 cagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| ||||||||| | ||||||| || || || ||| ||||||||||||||| | Sbjct: 718 cagacgctcaccttcctcgacgtcgccccggcgggctggacgttcggccagaccttctcg 777 Query: 261 accaacaagcagttctcttaa 281 ||| |||||||||||||| Sbjct: 778 acctcacagcagttctcttaa 798
>dbj|AK069548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022N21, full insert sequence Length = 1137 Score = 216 bits (109), Expect = 6e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 21 gactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtg 80 |||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| Sbjct: 569 gactacttcgagctggtgctcgtctccaacgtcggcggcgtcggctccatccagtcggtg 628 Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 || |||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 629 tcgatcaaggggtcgaggaccgggtggatggccatgtccaggaattggggcgtcaactgg 688 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||||||||||| ||| ||| |||||||| |||||| |||||||||||| ||||||| Sbjct: 689 cagtccaacgcctacctcgacggccagagcctgtcgttcaaggtcaccagcagcgacggc 748 Query: 201 cagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| ||||||||| | ||||||| || || || ||| ||||||||||||||| | Sbjct: 749 cagacgctcaccttcctcgacgtcgccccggcgggctggacgttcggccagaccttctcg 808 Query: 261 accaacaagcagttctcttaa 281 ||| |||||||||||||| Sbjct: 809 acctcacagcagttctcttaa 829
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 216 bits (109), Expect = 6e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 21 gactacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtg 80 |||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| Sbjct: 18091 gactacttcgagctggtgctcgtctccaacgtcggcggcgtcggctccatccagtcggtg 18150 Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 || |||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 18151 tcgatcaaggggtcgaggaccgggtggatggccatgtccaggaattggggcgtcaactgg 18210 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||||||||||| ||| ||| |||||||| |||||| |||||||||||| ||||||| Sbjct: 18211 cagtccaacgcctacctcgacggccagagcctgtcgttcaaggtcaccagcagcgacggc 18270 Query: 201 cagacgatcaccttccccaacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| ||||||||| | ||||||| || || || ||| ||||||||||||||| | Sbjct: 18271 cagacgctcaccttcctcgacgtcgccccggcgggctggacgttcggccagaccttctcg 18330 Query: 261 accaacaagcagttctcttaa 281 ||| |||||||||||||| Sbjct: 18331 acctcacagcagttctcttaa 18351
>ref|XM_475418.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 741 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 547 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggccagaactgg 606 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 607 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 666 Query: 201 c 201 | Sbjct: 667 c 667
>gb|AF394545.1| Oryza sativa alpha-expansin OsEXPA4 (EXPA4) gene, complete cds Length = 5851 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 4972 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggccagaactgg 5031 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 5032 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 5091 Query: 201 c 201 | Sbjct: 5092 c 5092
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 38093 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggccagaactgg 38034 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 38033 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 37974 Query: 201 c 201 | Sbjct: 37973 c 37973
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 23352557 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggccagaactgg 23352498 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 23352497 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 23352438 Query: 201 c 201 | Sbjct: 23352437 c 23352437 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||| ||||||||||||||||||||||| Sbjct: 11683451 ggtttgaaagatatggattttcaaagtt 11683478 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||||| ||||||||||||||| ||||| Sbjct: 22931337 ggttcggaagatatggattttcgaagtt 22931364 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||||| ||||||||||||||| ||||| Sbjct: 1739989 ggttcggaagatatggattttcgaagtt 1739962
>dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G10, full insert sequence Length = 2440 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 609 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggccagaactgg 668 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 669 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 728 Query: 201 c 201 | Sbjct: 729 c 729
>dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029P10, full insert sequence Length = 1311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 610 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggccagaactgg 669 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 670 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 729 Query: 201 c 201 | Sbjct: 730 c 730
>gb|U85246.1|OSU85246 Oryza sativa expansin (Os-EXP4) mRNA, complete cds Length = 1219 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 600 tccatcaaggggtcgcgcaccgggtggcagcccatgtcgcggaactggggtcagaactgg 659 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| | ||| ||| ||||||||||| |||||||||||| || ||||||| Sbjct: 660 cagagcaacgcgttcctcgacggccagagcctctccttccaggtcaccgccagcgacggc 719 Query: 201 c 201 | Sbjct: 720 c 720
>dbj|AB196979.1| Sagittaria pygmaea SpEXPA1 mRNA for expansin, complete cds Length = 1355 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcgg 55 |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 667 ggttcaccgtcaacggccgcgactacttcgagctcgtcctcgtcaccaacgtcgg 721 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 111 cccatgtccaggaactggggggtcaactggcagtccaacgcgctgctcagcgggcagagc 170 |||||||||||||||||||||| ||| |||||| |||||| |||| ||| ||| Sbjct: 780 cccatgtccaggaactggggggccaattggcaggccaacggatatctcaacggacagtca 839 Query: 171 ctctcgttccaggtcaccagcaccgacggccagacg 206 ||||| |||| |||||||| |||||||||||||||| Sbjct: 840 ctctccttccgggtcaccaccaccgacggccagacg 875
>gb|AF394549.1| Oryza sativa alpha-expansin OsEXPA13 (EXPA13) gene, complete cds Length = 4996 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttc 215 |||| ||| ||| ||||||| |||| |||||||| |||||| ||||||||| || |||| Sbjct: 3500 ctcaccggccagggcctctccttccgggtcaccatcaccgatggccagacgctcgtcttc 3559 Query: 216 cccaacgtcgctcccgccggatggggcttcggccagaccttcgc 259 |||||||||| || | |||||||| | |||||||| || ||||| Sbjct: 3560 cccaacgtcgttcgccccggatggaggttcggccaaacgttcgc 3603
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttc 215 |||| ||| ||| ||||||| |||| |||||||| |||||| ||||||||| || |||| Sbjct: 9552153 ctcaccggccagggcctctccttccgggtcaccatcaccgatggccagacgctcgtcttc 9552212 Query: 216 cccaacgtcgctcccgccggatggggcttcggccagaccttcgc 259 |||||||||| || | |||||||| | |||||||| || ||||| Sbjct: 9552213 cccaacgtcgttcgccccggatggaggttcggccaaacgttcgc 9552256 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 23917708 caacgcgctgctcagcgggcag 23917687
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0693E08 Length = 157969 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttc 215 |||| ||| ||| ||||||| |||| |||||||| |||||| ||||||||| || |||| Sbjct: 16371 ctcaccggccagggcctctccttccgggtcaccatcaccgatggccagacgctcgtcttc 16430 Query: 216 cccaacgtcgctcccgccggatggggcttcggccagaccttcgc 259 |||||||||| || | |||||||| | |||||||| || ||||| Sbjct: 16431 cccaacgtcgttcgccccggatggaggttcggccaaacgttcgc 16474
>gb|AF332172.1| Zea mays alpha-expansin 4 (expA4) mRNA, partial cds Length = 929 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 97 gcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgc 151 ||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 410 gcaccgggtggctgcccatgtccaggaactggggccagaactggcagtccaacgc 464
>gb|DQ061055.1| Oryza sativa (japonica cultivar-group) alpha-expansin 13 (EXPA13) mRNA, complete cds Length = 826 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttc 215 |||| ||| ||| ||||||| |||| |||||||| |||||| ||||||||| || |||| Sbjct: 664 ctcaccggccagggcctctccttccgggtcaccatcaccgatggccagacgctcgtcttc 723 Query: 216 cccaacgtcgctcccgccggatggggcttcggcca 250 |||||||||| || | |||||||| | |||||||| Sbjct: 724 cccaacgtcgttcgccccggatggaggttcggcca 758
>gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA, partial cds Length = 932 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||||| ||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 261 aaggggtccagcaccgggtggatgcccatgtcccgcaactggggccagaactggcagtcc 320 Query: 147 aacgc 151 ||||| Sbjct: 321 aacgc 325
>gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, complete cds Length = 1013 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||||| ||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 668 aaggggtccagcaccgggtggatgcccatgtcccgcaactggggccagaactggcagtcc 727 Query: 147 aacgc 151 ||||| Sbjct: 728 aacgc 732
>gb|AF247163.1| Oryza sativa alpha-expansin OsEXPA6 mRNA, complete cds Length = 1197 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||||||||||||| || ||||||| | || |||||||||| |||||||||||||| Sbjct: 503 ggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcg 562
>gb|AF332169.1| Zea mays alpha-expansin (expA1) mRNA, complete cds Length = 1090 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaac 137 |||||||||||||| || ||||||||||| |||||||||| | |||||||| ||| Sbjct: 626 gtgtccatcaagggctccagcaccgggtggcagcccatgtcccgcaactggggccagaac 685 Query: 138 tggcagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgac 197 |||||| |||| |||| ||| ||| |||||||| || |||||||||||| || |||| Sbjct: 686 tggcagagcaactcgctcctcgacggccagagcctgtccttccaggtcaccgccagcgac 745 Query: 198 ggcc 201 |||| Sbjct: 746 ggcc 749
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||||||||||||| || ||||||| | || |||||||||| |||||||||||||| Sbjct: 12444446 ggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcg 12444387 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 34205206 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 34205147 Query: 147 aac 149 ||| Sbjct: 34205146 aac 34205144 Score = 54.0 bits (27), Expect = 5e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||| ||||| | |||||||||||||||||||| ||| |||||||| |||| Sbjct: 17747583 ggttcaccgtcgccggcctcaactacttcgagctcgtgctcatcaccaacgtcgccggc 17747641 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 34205074 aacgccgcacccgccggatggcacttcggccagaccttcg 34205035 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 243 ttcggccagaccttcgccaccaacaagcagttc 275 ||||||||||||||| ||||| || |||||||| Sbjct: 17747825 ttcggccagaccttctccacctaccagcagttc 17747857 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 98 caccgggtggatgcccatgtccaggaactggggggtcaactggcagtc 145 |||||||||||| | ||||| |||||||||| | |||||||||||| Sbjct: 17747680 caccgggtggatccagatgtcgcggaactggggcgccaactggcagtc 17747727 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| || || ||||||| ||||||||||||||| Sbjct: 14734169 caacgtcgcgccggcgggatgggcgttcggccagaccttc 14734208
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||||||||||||| || ||||||| | || |||||||||| |||||||||||||| Sbjct: 102128 ggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcg 102069
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||||||||||||| || ||||||| | || |||||||||| |||||||||||||| Sbjct: 12441209 ggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcg 12441150 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 34295678 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 34295619 Query: 147 aac 149 ||| Sbjct: 34295618 aac 34295616 Score = 54.0 bits (27), Expect = 5e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||| ||||| | |||||||||||||||||||| ||| |||||||| |||| Sbjct: 17741124 ggttcaccgtcgccggcctcaactacttcgagctcgtgctcatcaccaacgtcgccggc 17741182 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 34295546 aacgccgcacccgccggatggcacttcggccagaccttcg 34295507 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 243 ttcggccagaccttcgccaccaacaagcagttc 275 ||||||||||||||| ||||| || |||||||| Sbjct: 17741366 ttcggccagaccttctccacctaccagcagttc 17741398 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 98 caccgggtggatgcccatgtccaggaactggggggtcaactggcagtc 145 |||||||||||| | ||||| |||||||||| | |||||||||||| Sbjct: 17741221 caccgggtggatccagatgtcgcggaactggggcgccaactggcagtc 17741268 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| || || ||||||| ||||||||||||||| Sbjct: 14728703 caacgtcgcgccggcgggatgggcgttcggccagaccttc 14728742
>dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-C08, full insert sequence Length = 1044 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||||||||||||| || ||||||| | || |||||||||| |||||||||||||| Sbjct: 504 ggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcg 563
>gb|AY104146.1| Zea mays PCO064861 mRNA sequence Length = 1106 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaac 137 |||||||||||||| || ||||||||||| |||||||||| | |||||||| ||| Sbjct: 643 gtgtccatcaagggctccagcaccgggtggcagcccatgtcccgcaactggggccagaac 702 Query: 138 tggcagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgac 197 |||||| |||| |||| ||| ||| |||||||| || |||||||||||| || |||| Sbjct: 703 tggcagagcaactcgctcctcgacggccagagcctgtccttccaggtcaccgccagcgac 762 Query: 198 ggcc 201 |||| Sbjct: 763 ggcc 766
>ref|NM_185168.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1338 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 627 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 686 Query: 147 aac 149 ||| Sbjct: 687 aac 689 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 759 aacgccgcacccgccggatggcacttcggccagaccttcg 798
>gb|AF247164.1| Oryza sativa alpha-expansin OsEXPA7 mRNA, complete cds Length = 1146 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 627 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 686 Query: 147 aac 149 ||| Sbjct: 687 aac 689 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 759 aacgccgcacccgccggatggcacttcggccagaccttcg 798
>gb|AF394547.1| Oryza sativa alpha-expansin OsEXPA7 (EXPA7) gene, complete cds Length = 4985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 3989 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 4048 Query: 147 aac 149 ||| Sbjct: 4049 aac 4051 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 4121 aacgccgcacccgccggatggcacttcggccagaccttcg 4160
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 129792 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 129851 Query: 147 aac 149 ||| Sbjct: 129852 aac 129854 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 129924 aacgccgcacccgccggatggcacttcggccagaccttcg 129963
>dbj|AK119215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G10, full insert sequence Length = 1366 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 646 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 705 Query: 147 aac 149 ||| Sbjct: 706 aac 708 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 778 aacgccgcacccgccggatggcacttcggccagaccttcg 817
>emb|AJ276006.1|FPR276006 Festuca pratensis partial mRNA for expansin (exp1 gene) Length = 1145 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 99 accgggtggatgcccatgtccaggaactggggggtcaactggcagtc 145 |||||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 625 accgggtggatggccatgtccaggaactggggcgcaaactggcagtc 671
>dbj|AK101784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065B20, full insert sequence Length = 1319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 823 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 882 Query: 147 aac 149 ||| Sbjct: 883 aac 885 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 955 aacgccgcacccgccggatggcacttcggccagaccttcg 994
>dbj|AK063455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G06, full insert sequence Length = 1653 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 87 aaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactggcagtcc 146 |||||| || |||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 158 aaggggacgagcaccgggtggatgcccatgtcgcggaactggggccagaactggcagtcc 217 Query: 147 aac 149 ||| Sbjct: 218 aac 220 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagaccttcg 258 |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 290 aacgccgcacccgccggatggcacttcggccagaccttcg 329
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 100 ccgggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgcgctgctca 159 ||||||||||| ||||||| | |||||||| | |||||||||||| ||| ||| Sbjct: 85756 ccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcg 85815 Query: 160 gcgggcagagcctctcgttccaggtcaccagcaccgacggccagac 205 ||||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 85816 acgggcagggcctctcgttccgggtcaccgccaccgacggccagac 85861
>gb|DQ061068.1| Oryza sativa (japonica cultivar-group) alpha-expansin 29 (EXPA29) mRNA, partial cds Length = 708 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 100 ccgggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgcgctgctca 159 ||||||||||| ||||||| | |||||||| | |||||||||||| ||| ||| Sbjct: 540 ccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcg 599 Query: 160 gcgggcagagcctctcgttccaggtcaccagcaccgacggccagac 205 ||||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 600 acgggcagggcctctcgttccgggtcaccgccaccgacggccagac 645
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 100 ccgggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgcgctgctca 159 ||||||||||| ||||||| | |||||||| | |||||||||||| ||| ||| Sbjct: 30005059 ccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcg 30005118 Query: 160 gcgggcagagcctctcgttccaggtcaccagcaccgacggccagac 205 ||||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 30005119 acgggcagggcctctcgttccgggtcaccgccaccgacggccagac 30005164 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 530 tatggttcgaaagatatggattttcaaagtt 560 ||||||||| ||||||||||||| ||||||| Sbjct: 9189458 tatggttcgtaagatatggatttccaaagtt 9189428
>dbj|AB196981.1| Sagittaria pygmaea SpEXP3 mRNA for expansin, complete cds Length = 1781 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 102 gggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgc 151 ||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 941 gggtggatgcccatgagcaggaactgggggcagaactggcagtccaacgc 990
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 100 ccgggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgcgctgctca 159 ||||||||||| ||||||| | |||||||| | |||||||||||| ||| ||| Sbjct: 81207 ccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcg 81266 Query: 160 gcgggcagagcctctcgttccaggtcaccagcaccgacggccagac 205 ||||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 81267 acgggcagggcctctcgttccgggtcaccgccaccgacggccagac 81312
>dbj|AK070133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046O16, full insert sequence Length = 1071 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 100 ccgggtggatgcccatgtccaggaactggggggtcaactggcagtccaacgcgctgctca 159 ||||||||||| ||||||| | |||||||| | |||||||||||| ||| ||| Sbjct: 686 ccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcg 745 Query: 160 gcgggcagagcctctcgttccaggtcaccagcaccgacggccagac 205 ||||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 746 acgggcagggcctctcgttccgggtcaccgccaccgacggccagac 791
>gb|AF539640.1| Musa acuminata expansin1 (EXP1) gene, complete cds Length = 1834 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 161 cgggcagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttccccaa 220 |||||||||||||||||||||||| || | || ||||||| |||||||||| | ||| Sbjct: 1704 cgggcagagcctctcgttccaggtgactaccagcgacggcaggacgatcaccagctacaa 1763 Query: 221 cgtcgctcccgccggatggggcttcggccagaccttc 257 ||| || || ||||| ||| ||||||||||||||| Sbjct: 1764 cgtggcacctgccgggtggcagttcggccagaccttc 1800
>gb|AY083168.1| Musa acuminata expansin 1 (EXP1) mRNA, complete cds Length = 1098 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 161 cgggcagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttccccaa 220 |||||||||||||||||||||||| || | || ||||||| |||||||||| | ||| Sbjct: 713 cgggcagagcctctcgttccaggtgactaccagcgacggcaggacgatcaccagctacaa 772 Query: 221 cgtcgctcccgccggatggggcttcggccagaccttc 257 ||| || || ||||| ||| ||||||||||||||| Sbjct: 773 cgtggcacctgccgggtggcagttcggccagaccttc 809
>ref|XM_468791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 54.0 bits (27), Expect = 5e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||| ||||| | |||||||||||||||||||| ||| |||||||| |||| Sbjct: 482 ggttcaccgtcgccggcctcaactacttcgagctcgtgctcatcaccaacgtcgccggc 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 243 ttcggccagaccttcgccaccaacaagcagttc 275 ||||||||||||||| ||||| || |||||||| Sbjct: 724 ttcggccagaccttctccacctaccagcagttc 756 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 98 caccgggtggatgcccatgtccaggaactggggggtcaactggcagtc 145 |||||||||||| | ||||| |||||||||| | |||||||||||| Sbjct: 579 caccgggtggatccagatgtcgcggaactggggcgccaactggcagtc 626
>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete sequence Length = 136916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||| ||||| | |||||||||||||||||||| ||| |||||||| |||| Sbjct: 36424 ggttcaccgtcgccggcctcaactacttcgagctcgtgctcatcaccaacgtcgccggc 36366 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 243 ttcggccagaccttcgccaccaacaagcagttc 275 ||||||||||||||| ||||| || |||||||| Sbjct: 36182 ttcggccagaccttctccacctaccagcagttc 36150 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 98 caccgggtggatgcccatgtccaggaactggggggtcaactggcagtc 145 |||||||||||| | ||||| |||||||||| | |||||||||||| Sbjct: 36327 caccgggtggatccagatgtcgcggaactggggcgccaactggcagtc 36280
>dbj|AK111273.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-G03, full insert sequence Length = 1012 Score = 54.0 bits (27), Expect = 5e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||| ||||| | |||||||||||||||||||| ||| |||||||| |||| Sbjct: 557 ggttcaccgtcgccggcctcaactacttcgagctcgtgctcatcaccaacgtcgccggc 615 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 243 ttcggccagaccttcgccaccaacaagcagttc 275 ||||||||||||||| ||||| || |||||||| Sbjct: 799 ttcggccagaccttctccacctaccagcagttc 831 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 98 caccgggtggatgcccatgtccaggaactggggggtcaactggcagtc 145 |||||||||||| | ||||| |||||||||| | |||||||||||| Sbjct: 654 caccgggtggatccagatgtcgcggaactggggcgccaactggcagtc 701
>ref|NM_190380.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 559 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 611
>gb|AF394544.1| Oryza sativa alpha-expansin OsEXPA2 (EXPA2) gene, complete cds Length = 5000 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 2606 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 2658
>gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group) expansin Os-EXPA2 (Os-EXPA2) mRNA, complete cds Length = 1323 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 641 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 693
>gb|AY083167.1| Malus x domestica expansin 2 (EXP2) mRNA, partial cds Length = 815 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 |||| ||| ||||||||||| ||||||||||||| || ||||||| Sbjct: 468 ctcaacggccagagcctctccttccaggtcaccaccagcgacggc 512
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 35139897 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 35139949 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 23 ctacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 ||||||| | || |||||||||| |||||||||||||| Sbjct: 9525648 ctacttcaacctggtgctcgtcaccaacgtcggcggcg 9525685 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 9525843 caacgtcgccccctccggctggtccttcggccagaccttc 9525882
>dbj|AB093029.1| Pyrus communis PcExp2 mRNA for expansin, complete cds Length = 1153 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 |||| ||| ||||||||||| ||||||||||||| || ||||||| Sbjct: 701 ctcaacggccagagcctctccttccaggtcaccaccagcgacggc 745
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 18981 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 19033
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 147047 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 147099
>dbj|AB099927.1| Malus x domestica MdEXPA2 mRNA for expansin, partial cds Length = 870 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 |||| ||| ||||||||||| ||||||||||||| || ||||||| Sbjct: 544 ctcaacggccagagcctctccttccaggtcaccaccagcgacggc 588
>emb|AJ276010.1|FPR276010 Festuca pratensis partial mRNA for expansin (exp5 gene) Length = 1000 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 99 accgggtggatgcccatgtccaggaactggggggtcaactggcag 143 ||||| ||||||| ||||||||||||||||| |||| ||||||| Sbjct: 624 accggatggatgcagatgtccaggaactggggcgtcatctggcag 668
>dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M24, full insert sequence Length = 1341 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 78 gtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactgggg 130 ||||| ||||||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 656 gtgtcgatcaaggggtccagcaccgggtggcagcccatgtcccgcaactgggg 708
>ref|NM_196686.1| Oryza sativa (japonica cultivar-group) putative expansin (OSJNBb0016G17.15), mRNA Length = 759 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 20 cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 |||| |||||||||||||||||||| |||||||| |||| Sbjct: 495 cgaccacttcgagctcgtgctcgtcgccaacgtcgccggc 534
>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12, complete sequence Length = 139627 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||| ||||||||||||||||||||||| Sbjct: 127886 ggtttgaaagatatggattttcaaagtt 127913
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||| ||||||||||||||||||||||| Sbjct: 9091 ggtttgaaagatatggattttcaaagtt 9118
>gb|DQ100330.1| Eucalyptus globulus putative alpha-expansin (EXPA3) mRNA, partial cds Length = 887 Score = 48.1 bits (24), Expect = 0.033 Identities = 52/60 (86%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 2 ggttcaccgtcaacggcc-cgactacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 |||||||| ||||||||| | ||||||| | ||||| ||||||| |||||||||||||| Sbjct: 123 ggttcaccatcaacggccactcctacttcaacctcgtcctcgtcaccaacgtcggcggcg 182 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 ||||||||| |||||||| ||| |||||| |||||||||||| Sbjct: 340 caacgtcgcccccgccgggtggtccttcgggcagaccttcgcc 382
>gb|DQ100329.1| Eucalyptus globulus putative alpha-expansin (EXPA2) mRNA, partial cds Length = 1168 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 99 accgggtggatgcccatgtccaggaactgggg 130 |||||||||||| ||||||| ||||||||||| Sbjct: 445 accgggtggatgtccatgtcgaggaactgggg 476
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 20 cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 |||| |||||||||||||||||||| |||||||| |||| Sbjct: 92538 cgaccacttcgagctcgtgctcgtcgccaacgtcgccggc 92577 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 22 actacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||||| |||||| ||| |||||||| |||| Sbjct: 94668 actacttcgagctggtgctcatcaccaacgtcgccggc 94631
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 20 cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 |||| |||||||||||||||||||| |||||||| |||| Sbjct: 15238839 cgaccacttcgagctcgtgctcgtcgccaacgtcgccggc 15238878 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 22 actacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||||| |||||| ||| |||||||| |||| Sbjct: 15240969 actacttcgagctggtgctcatcaccaacgtcgccggc 15240932
>gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, complete cds Length = 1246 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/72 (83%) Strand = Plus / Plus Query: 72 cggtcggtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggg 131 ||||| |||||||||||||| |||||||||| ||| | |||||||| | |||||||| Sbjct: 603 cggtccgtgtccatcaagggcacgcgcaccggctggcaggccatgtcccgcaactggggc 662 Query: 132 gtcaactggcag 143 | ||||||||| Sbjct: 663 atgaactggcag 674
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 20 cgactacttcgagctcgtgctcgtcagcaacgtcggcggc 59 |||| |||||||||||||||||||| |||||||| |||| Sbjct: 15247080 cgaccacttcgagctcgtgctcgtcgccaacgtcgccggc 15247119 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 22 actacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||||| |||||| ||| |||||||| |||| Sbjct: 15249210 actacttcgagctggtgctcatcaccaacgtcgccggc 15249173
>gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, complete cds Length = 1265 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/72 (83%) Strand = Plus / Plus Query: 72 cggtcggtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggg 131 ||||| |||||||||||||| |||||||||| ||| | |||||||| | |||||||| Sbjct: 603 cggtccgtgtccatcaagggcacgcgcaccggctggcaggccatgtcccgcaactggggc 662 Query: 132 gtcaactggcag 143 | ||||||||| Sbjct: 663 atgaactggcag 674
>dbj|AB196982.1| Sagittaria pygmaea SpEXPA4 mRNA for expansin, complete cds Length = 1132 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 22 actacttcgagctcgtgctcgtcagcaacgtcggcggcgtgggttccatccggtcggtgt 81 ||||||||||||| ||||| || ||||||||||||||||| |||||| | | |||| Sbjct: 636 actacttcgagctggtgctggtggctaacgtcggcggcgtgggcaccatccaggccgtgt 695 Query: 82 ccatcaa 88 ||||||| Sbjct: 696 ccatcaa 702
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 530 tatggttcgaaagatatggattttcaaagtt 560 ||||||||| ||||||||||||| ||||||| Sbjct: 83480 tatggttcgtaagatatggatttccaaagtt 83450
>gb|AY543534.1| Triticum aestivum expansin EXPA8 mRNA, complete cds Length = 1005 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttcgcc 260 |||||| |||||| |||| ||| ||||||||||||||| |||| Sbjct: 762 caacgtggctccctccggttggagcttcggccagacctacgcc 804
>ref|XM_493787.1| Oryza sativa (japonica cultivar-group), Ozsa8506 predicted mRNA Length = 747 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 23 ctacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 ||||||| | || |||||||||| |||||||||||||| Sbjct: 495 ctacttcaacctggtgctcgtcaccaacgtcggcggcg 532 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 690 caacgtcgccccctccggctggtccttcggccagaccttc 729
>ref|XM_466656.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1399 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 517 caacgcgctgctcagcgggcag 538
>ref|XM_506859.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0030C08.39 mRNA Length = 1432 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 483 caacgcgctgctcagcgggcag 504
>ref|NM_196687.1| Oryza sativa (japonica cultivar-group) putative expansin (OSJNBb0016G17.16), mRNA Length = 768 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 22 actacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||||| |||||| ||| |||||||| |||| Sbjct: 506 actacttcgagctggtgctcatcaccaacgtcgccggc 543
>gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha-expansin 11 (EXPA11) mRNA, partial cds Length = 798 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 23 ctacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 ||||||| | || |||||||||| |||||||||||||| Sbjct: 486 ctacttcaacctggtgctcgtcaccaacgtcggcggcg 523 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 681 caacgtcgccccctccggctggtccttcggccagaccttc 720
>gb|DQ061067.1| Oryza sativa (japonica cultivar-group) alpha-expansin 28 (EXPA28) mRNA, partial cds Length = 737 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 22 actacttcgagctcgtgctcgtcagcaacgtcggcggc 59 ||||||||||||| |||||| ||| |||||||| |||| Sbjct: 495 actacttcgagctggtgctcatcaccaacgtcgccggc 532
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 23 ctacttcgagctcgtgctcgtcagcaacgtcggcggcg 60 ||||||| | || |||||||||| |||||||||||||| Sbjct: 59077 ctacttcaacctggtgctcgtcaccaacgtcggcggcg 59114 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 59272 caacgtcgccccctccggctggtccttcggccagaccttc 59311
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds Length = 1142 Score = 44.1 bits (22), Expect = 0.51 Identities = 76/94 (80%) Strand = Plus / Plus Query: 165 cagagcctctcgttccaggtcaccagcaccgacggccagacgatcaccttccccaacgtc 224 ||||||||||| |||| ||||||| || |||||||| || ||||| | ||||| | Sbjct: 696 cagagcctctccttccgggtcaccctcagcgacggccgcaccgtcaccagcaacaacgcc 755 Query: 225 gctcccgccggatggggcttcggccagaccttcg 258 || |||||||| ||| ||||||||||||||||| Sbjct: 756 gcccccgccggctggtccttcggccagaccttcg 789
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 139374 caacgcgctgctcagcgggcag 139353
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 51672 caacgcgctgctcagcgggcag 51651
>dbj|AK105867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A08, full insert sequence Length = 1432 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 483 caacgcgctgctcagcgggcag 504
>dbj|AK068690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164G19, full insert sequence Length = 1399 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 caacgcgctgctcagcgggcag 167 |||||||||||||||||||||| Sbjct: 517 caacgcgctgctcagcgggcag 538
>gb|AF428175.1| Rumex palustris expansin 8 precursor (EXP8) mRNA, complete cds Length = 1117 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 75 tcggtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggg 131 |||||||| || ||||||||||| || |||||| | ||||||| ||||||||||| Sbjct: 636 tcggtgtcgattaaggggtcgcggacagggtggcagtccatgtcacggaactggggg 692
>gb|BT016845.1| Zea mays clone Contig678 mRNA sequence Length = 1066 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tggggcttcggccagaccttc 257 ||||||||||||||||||||| Sbjct: 508 tggggcttcggccagaccttc 488
>gb|AC165424.2| Mus musculus BAC clone RP24-68L23 from chromosome 17, complete sequence Length = 178781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tgcaaaaagtttcatcaaatt 523 ||||||||||||||||||||| Sbjct: 161364 tgcaaaaagtttcatcaaatt 161384
>gb|AC119677.2| Homo sapiens chromosome 1 clone RP5-1066H13, complete sequence Length = 170397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 6180 ggggtgtacggtatttcttga 6200
>emb|CR859200.1| Pongo pygmaeus mRNA; cDNA DKFZp459H0131 (from clone DKFZp459H0131) Length = 2101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1570 ggggtgtacggtatttcttga 1590
>dbj|AK126386.1| Homo sapiens cDNA FLJ44422 fis, clone UTERU2003456 Length = 1965 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1580 ggggtgtacggtatttcttga 1600
>dbj|AK093786.1| Homo sapiens cDNA FLJ36467 fis, clone THYMU2015441 Length = 1897 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1512 ggggtgtacggtatttcttga 1532
>emb|CR602027.1| full-length cDNA clone CS0DG001YN24 of B cells (Ramos cell line) of Homo sapiens (human) Length = 560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 173 ggggtgtacggtatttcttga 193
>emb|CR601428.1| full-length cDNA clone CS0DF026YB20 of Fetal brain of Homo sapiens (human) Length = 1013 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 677 ggggtgtacggtatttcttga 697
>emb|CR590607.1| full-length cDNA clone CS0DF007YA10 of Fetal brain of Homo sapiens (human) Length = 1939 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1563 ggggtgtacggtatttcttga 1583
>gb|S74703.1| histone H1 transcription factor large subunit 2A=glutamine-rich CCAAT-binding transcription factor [human, HeLa cells, mRNA, 1862 nt] Length = 1862 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1477 ggggtgtacggtatttcttga 1497
>gb|AF350938.1|AF350938 Prunus cerasus expansin (EXP3) mRNA, complete cds Length = 1172 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 165 cagagcctctcgttccaggtcaccagcaccgacggcc 201 ||||||||||| ||| ||||||||| || |||||||| Sbjct: 702 cagagcctctccttcaaggtcaccaccagcgacggcc 738
>gb|AF191744.1|AF191744 Homo sapiens NFY-C variant DS2.8 mRNA, complete cds Length = 2160 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1772 ggggtgtacggtatttcttga 1792
>emb|AJ234766.1|HVU234766 Hordeum vulgare genomic DNA fragment; clone MWG2088.uni Length = 363 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ggtcaccagcaccgacggccagacg 206 |||||||| |||||||||||||||| Sbjct: 85 ggtcaccatcaccgacggccagacg 61
>dbj|AK000346.1| Homo sapiens cDNA FLJ20339 fis, clone HEP12350 Length = 2371 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1967 ggggtgtacggtatttcttga 1987
>emb|AJ276007.1|FPR276007 Festuca pratensis partial mRNA for expansin (exp2 gene) Length = 1248 Score = 42.1 bits (21), Expect = 2.0 Identities = 96/121 (79%) Strand = Plus / Plus Query: 81 tccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggggtcaactgg 140 ||||||||||| || ||||||||||| | |||||||| | |||||||| |||||| Sbjct: 629 tccatcaagggctccagcaccgggtggcaggccatgtcccgcaactggggccagaactgg 688 Query: 141 cagtccaacgcgctgctcagcgggcagagcctctcgttccaggtcaccagcaccgacggc 200 ||| ||||||| ||| ||| ||||||||||| ||| | ||||||| || ||||||| Sbjct: 689 cagagcaacgcggacctcgacggccagagcctctccttcaaagtcaccatcagcgacggc 748 Query: 201 c 201 | Sbjct: 749 c 749
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 cgtgctcgtcagcaacgtcggcggc 59 ||||||||||| ||||||||||||| Sbjct: 560490 cgtgctcgtcaacaacgtcggcggc 560466
>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds Length = 1106 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttcg 258 ||||| ||| |||||||| ||| ||||||||||||||||| Sbjct: 752 caacgccgcccccgccggctggtccttcggccagaccttcg 792
>dbj|AB208975.1| Homo sapiens mRNA for nuclear transcription factor Y, gamma variant protein Length = 1911 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1526 ggggtgtacggtatttcttga 1546
>ref|NM_014223.2| Homo sapiens nuclear transcription factor Y, gamma (NFYC), mRNA Length = 1965 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1581 ggggtgtacggtatttcttga 1601
>emb|Z74792.1|HSCBFC H.sapiens mRNA for CCAAT transcription binding factor subunit gamma Length = 1965 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1581 ggggtgtacggtatttcttga 1601
>dbj|D89986.1| Homo sapiens mRNA for HSM-2, complete cds Length = 1869 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggggtgtacggtatttcttga 355 ||||||||||||||||||||| Sbjct: 1460 ggggtgtacggtatttcttga 1480
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 3351964 gcgtcgccgtgaaatcttcaccgg 3351987
>ref|XM_470717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 795 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| || || ||||||| ||||||||||||||| Sbjct: 735 caacgtcgcgccggcgggatgggcgttcggccagaccttc 774
>gb|U16816.1|LCU16816 Lates calcarifer growth hormone gene, promoter region and complete cds Length = 2396 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 aaaaagtttcatcaaatttaaacc 529 |||| ||||||||||||||||||| Sbjct: 127 aaaatgtttcatcaaatttaaacc 150
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||||| ||||||||||||||| ||||| Sbjct: 52718 ggttcggaagatatggattttcgaagtt 52691
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||||| ||||||||||||||| ||||| Sbjct: 35350 ggttcggaagatatggattttcgaagtt 35377
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtgctcgtcagcaacgtcggcgg 58 ||||||||||| |||||||||||| Sbjct: 1267590 cgtgctcgtcaacaacgtcggcgg 1267613
>gb|AF394556.1| Oryza sativa alpha-expansin OsEXPA21 (EXPA21) gene, complete cds Length = 3929 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| || || ||||||| ||||||||||||||| Sbjct: 3376 caacgtcgcgccggcgggatgggcgttcggccagaccttc 3415
>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete sequence Length = 207863 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 aaagtttcatcaaatttaaa 527 |||||||||||||||||||| Sbjct: 73615 aaagtttcatcaaatttaaa 73596
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 caccaacaagcagttctctt 279 |||||||||||||||||||| Sbjct: 60572 caccaacaagcagttctctt 60591
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 cgcgctgctcagcgggcaga 168 |||||||||||||||||||| Sbjct: 258097 cgcgctgctcagcgggcaga 258078
>emb|AL353807.18| Human DNA sequence from clone RP11-29H23 on chromosome 1 Contains the 5' end of the ASH1L gene for ash1 (absent, small, or homeotic)-like (Drosophila), two novel genes, a pseudogene similar to part of death associated protein 3 (DAP3), the gene for a novel protein (FLJ10504), the 3' end of a novel pseudogene and a CpG island, complete sequence Length = 179064 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ccagaccttcgccaccaaca 267 |||||||||||||||||||| Sbjct: 63488 ccagaccttcgccaccaaca 63469
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 3357819 gcgtcgccgtgaaatcttcaccgg 3357842
>emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on chromosome 10 Contains a ribosomal protein L29 (RPL29)(HIP,HUMRPL29) pseudogene, a CGI-45 protein (CGI-45) pseudogene, a novel pseudogene, a pseudogene similar to part of PSME2 (PA28B,REGbeta,PA28beta) (proteasome (prosome, macropain) activator subunit 2 (PA28 beta)) and a CpG island, complete sequence Length = 176577 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 tatggattttcaaagttcaa 563 |||||||||||||||||||| Sbjct: 110454 tatggattttcaaagttcaa 110435
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtgctcgtcagcaacgtcggcgg 58 ||||||||||| |||||||||||| Sbjct: 2583613 cgtgctcgtcaacaacgtcggcgg 2583636
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 3359652 gcgtcgccgtgaaatcttcaccgg 3359675
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 218 caacgtcgctcccgccggatggggcttcggccagaccttc 257 ||||||||| || || ||||||| ||||||||||||||| Sbjct: 73081 caacgtcgcgccggcgggatgggcgttcggccagaccttc 73120
>gb|AF279141.1|AF279141 Rhodococcus sp. 19070 benzoate dioxygenase large subunit (bopX), benzoate dioxygenase small subunit (bopY), benzoate dioxygenase reductase (bopZ), cis-diol dehydrogenase (bopL), and benzoate transport protein (bopK) genes, complete cds Length = 6058 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtgctcgtcagcaacgtcggcgg 58 ||||||||||| |||||||||||| Sbjct: 3842 cgtgctcgtcaacaacgtcggcgg 3865
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cgtgctcgtcagcaacgtcggcgg 58 ||||||||||| |||||||||||| Sbjct: 179332 cgtgctcgtcaacaacgtcggcgg 179309
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 ||||| |||||||||||||||| ||||| Sbjct: 20984415 ggttcaaaagatatggattttcgaagtt 20984388 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||| ||||||||||||||||| ||||| Sbjct: 12570318 ggttggaaagatatggattttcgaagtt 12570291
>dbj|AB196980.1| Sagittaria pygmaea SpEXPA2 mRNA for expansin, complete cds Length = 1026 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 219 aacgtcgctcccgccggatggggcttcggccagacc 254 ||||||||||| || |||||| ||||||| |||||| Sbjct: 820 aacgtcgctccggctggatggagcttcgggcagacc 855
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 3343081 gcgtcgccgtgaaatcttcaccgg 3343104
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 ||||| |||||||||||||||| ||||| Sbjct: 27714 ggttcaaaagatatggattttcgaagtt 27687
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tccaggtcaccagcaccgacggcc 201 |||||||||||| ||||||||||| Sbjct: 4666640 tccaggtcaccaccaccgacggcc 4666663
>dbj|AP005438.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1723_B06 Length = 136853 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 |||| ||||||||||||||||| ||||| Sbjct: 55011 ggttggaaagatatggattttcgaagtt 54984
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 533 ggttcgaaagatatggattttcaaagtt 560 ||||| |||||||||||||||| ||||| Sbjct: 112330 ggttcaaaagatatggattttcgaagtt 112303
>gb|AY106266.1| Zea mays PCO074010 mRNA sequence Length = 1218 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 104 gtggatgcccatgtccaggaactggggggtcaactggcagtcca 147 ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 752 gtggatgcccatgtcgcggaactggggccagaactggcagtcca 795
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds Length = 923 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcac 187 |||| ||| |||||||| |||||||||||||| Sbjct: 581 ctcaacggacagagcctttcgttccaggtcac 612
>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes Length = 372438 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 140542 gcgtcgccgtgaaatcttcaccgg 140565
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds Length = 998 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcac 187 |||| ||| |||||||| |||||||||||||| Sbjct: 732 ctcaacggacagagcctttcgttccaggtcac 763
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds Length = 1201 Score = 40.1 bits (20), Expect = 8.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 72 cggtcggtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggg 131 ||||| |||||||||||||| ||||||| || ||| | |||||||| | |||||||| Sbjct: 604 cggtccgtgtccatcaagggcacgcgcactggctggcaggccatgtcccgcaactggggc 663 Query: 132 gtcaactggcag 143 | ||||||||| Sbjct: 664 atgaactggcag 675
>gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, complete cds Length = 1226 Score = 40.1 bits (20), Expect = 8.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 72 cggtcggtgtccatcaaggggtcgcgcaccgggtggatgcccatgtccaggaactggggg 131 ||||| |||||||||||||| ||||||| || ||| | |||||||| | |||||||| Sbjct: 604 cggtccgtgtccatcaagggcacgcgcactggctggcaggccatgtcccgtaactggggc 663 Query: 132 gtcaactggcag 143 | ||||||||| Sbjct: 664 atgaactggcag 675
>dbj|AB104445.1| Vitis labrusca x Vitis vinifera Vexp-4 mRNA for expansin, complete cds Length = 1175 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 accgggtggatgcccatgtccaggaactgggg 130 ||||||||| ||||||||| ||||||||||| Sbjct: 627 accgggtggcagcccatgtcaaggaactgggg 658
>dbj|AB104444.1| Vitis labrusca x Vitis vinifera Vexp-3 mRNA for expansin, complete cds Length = 1195 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 accgggtggatgcccatgtccaggaactgggg 130 ||||||||| ||||||||| ||||||||||| Sbjct: 637 accgggtggcagcccatgtcaaggaactgggg 668
>dbj|AB104443.1| Vitis labrusca x Vitis vinifera Vexp-2 mRNA for expansin, complete cds Length = 1180 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 accgggtggatgcccatgtccaggaactgggg 130 ||||||||| ||||||||| ||||||||||| Sbjct: 624 accgggtggcagcccatgtcaaggaactgggg 655
>gb|AY543531.1| Triticum aestivum expansin EXPA5 mRNA, complete cds Length = 1004 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgggcagagcctctcgttcc 180 |||||||||||||||||||| Sbjct: 643 cgggcagagcctctcgttcc 662
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds Length = 891 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcac 187 |||| ||| |||||||| |||||||||||||| Sbjct: 581 ctcaacggacagagcctttcgttccaggtcac 612
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds Length = 919 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcac 187 |||| ||| |||||||| |||||||||||||| Sbjct: 581 ctcaacggacagagcctttcgttccaggtcac 612
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds Length = 923 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 156 ctcagcgggcagagcctctcgttccaggtcac 187 |||| ||| |||||||| |||||||||||||| Sbjct: 581 ctcaacggacagagcctttcgttccaggtcac 612
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 3175340 gcgtcgccgtgaaatcttcaccgg 3175317
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 3538871 gcgtcgccgtgaaatcttcaccgg 3538894
>gb|M18747.1|ECOGLTB E.coli gltB gene encoding glutamate synthase large and small subunits, complete cds Length = 6292 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcgtcgccgtgaaatcttctccgg 417 ||||||||||||||||||| |||| Sbjct: 5457 gcgtcgccgtgaaatcttcaccgg 5480 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,417,758 Number of Sequences: 3902068 Number of extensions: 4417758 Number of successful extensions: 81088 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 156 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 79640 Number of HSP's gapped (non-prelim): 1405 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
