| Clone Name | bags39d15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_462656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 184 bits (93), Expect = 2e-43 Identities = 339/421 (80%) Strand = Plus / Plus Query: 6 tctaactgtcttgagcagttcaaaaatgcttatgtgaaggagaaaccggcaaatgaagta 65 ||||| ||||||||||||||||||||||||||| || || || || || |||| || Sbjct: 256 tctaattgtcttgagcagttcaaaaatgcttattcgaggggaaagccagcttgtgaatta 315 Query: 66 tccattgcagtggcagcagctagcaagaagccaaaggatgtggagcttgcttgccctatc 125 || |||||||||| |||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 316 tcaggtgcagtggcacaagctagcaagaagccacaggagatggagcttgtgtgccctatc 375 Query: 126 tgccgtggggaagtgaagggctggacagtggttgaaccagctcgtcaatttctcaatcgc 185 ||||||||||| || || || |||||||||||||| ||||| | ||||||||| ||| Sbjct: 376 tgccgtggggatgttaaaggatggacagtggttgagccagccagaagatttctcaaccgc 435 Query: 186 aagaagagaacttgcattcatgaagattgcttgttcattgggtcatacaagaaactctgc 245 |||| ||| |||||||| ||||| | |||| || ||| ||||||| |||||| || Sbjct: 436 aagaggaggacttgcatgcatgagggatgctcttttggtggatcatacagaaaactccgc 495 Query: 246 aagcatgtgaaggccagacacccttcatcaaaacctcgtgaagttgacccggcacgtttg 305 || ||||||| | ||| || ||||||||||| ||||||||| | || | ||| | || Sbjct: 496 aaccatgtgaggtccaatcatccttcatcaaatcctcgtgaaatcgattctgcaagctta 555 Query: 306 gctgagtggaagcagcttgaaagtgcaaaggataggcaggatgcaatcagcatagtcaca 365 |||||||||||| |||||||| || |||||||||||||||||||| |||||| | ||| Sbjct: 556 gctgagtggaaggagcttgaatatgagaaggataggcaggatgcaataagcataattaca 615 Query: 366 ggcttgaatccagggtccatgattattggggactatcttattgaccccaatagtggcagc 425 | |||||||||||||| | || || ||||||||| | ||||||||||| |||| |||| Sbjct: 616 gcattgaatccagggtcaacaatcatgggggactatttcattgaccccaacagtgacagc 675 Query: 426 a 426 | Sbjct: 676 a 676
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 184 bits (93), Expect = 2e-43 Identities = 339/421 (80%) Strand = Plus / Minus Query: 6 tctaactgtcttgagcagttcaaaaatgcttatgtgaaggagaaaccggcaaatgaagta 65 ||||| ||||||||||||||||||||||||||| || || || || || |||| || Sbjct: 22313027 tctaattgtcttgagcagttcaaaaatgcttattcgaggggaaagccagcttgtgaatta 22312968 Query: 66 tccattgcagtggcagcagctagcaagaagccaaaggatgtggagcttgcttgccctatc 125 || |||||||||| |||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 22312967 tcaggtgcagtggcacaagctagcaagaagccacaggagatggagcttgtgtgccctatc 22312908 Query: 126 tgccgtggggaagtgaagggctggacagtggttgaaccagctcgtcaatttctcaatcgc 185 ||||||||||| || || || |||||||||||||| ||||| | ||||||||| ||| Sbjct: 22312907 tgccgtggggatgttaaaggatggacagtggttgagccagccagaagatttctcaaccgc 22312848 Query: 186 aagaagagaacttgcattcatgaagattgcttgttcattgggtcatacaagaaactctgc 245 |||| ||| |||||||| ||||| | |||| || ||| ||||||| |||||| || Sbjct: 22312847 aagaggaggacttgcatgcatgagggatgctcttttggtggatcatacagaaaactccgc 22312788 Query: 246 aagcatgtgaaggccagacacccttcatcaaaacctcgtgaagttgacccggcacgtttg 305 || ||||||| | ||| || ||||||||||| ||||||||| | || | ||| | || Sbjct: 22312787 aaccatgtgaggtccaatcatccttcatcaaatcctcgtgaaatcgattctgcaagctta 22312728 Query: 306 gctgagtggaagcagcttgaaagtgcaaaggataggcaggatgcaatcagcatagtcaca 365 |||||||||||| |||||||| || |||||||||||||||||||| |||||| | ||| Sbjct: 22312727 gctgagtggaaggagcttgaatatgagaaggataggcaggatgcaataagcataattaca 22312668 Query: 366 ggcttgaatccagggtccatgattattggggactatcttattgaccccaatagtggcagc 425 | |||||||||||||| | || || ||||||||| | ||||||||||| |||| |||| Sbjct: 22312667 gcattgaatccagggtcaacaatcatgggggactatttcattgaccccaacagtgacagc 22312608 Query: 426 a 426 | Sbjct: 22312607 a 22312607
>dbj|AK108771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H06, full insert sequence Length = 1403 Score = 184 bits (93), Expect = 2e-43 Identities = 339/421 (80%) Strand = Plus / Plus Query: 6 tctaactgtcttgagcagttcaaaaatgcttatgtgaaggagaaaccggcaaatgaagta 65 ||||| ||||||||||||||||||||||||||| || || || || || |||| || Sbjct: 527 tctaattgtcttgagcagttcaaaaatgcttattcgaggggaaagccagcttgtgaatta 586 Query: 66 tccattgcagtggcagcagctagcaagaagccaaaggatgtggagcttgcttgccctatc 125 || |||||||||| |||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 587 tcaggtgcagtggcacaagctagcaagaagccacaggagatggagcttgtgtgccctatc 646 Query: 126 tgccgtggggaagtgaagggctggacagtggttgaaccagctcgtcaatttctcaatcgc 185 ||||||||||| || || || |||||||||||||| ||||| | ||||||||| ||| Sbjct: 647 tgccgtggggatgttaaaggatggacagtggttgagccagccagaagatttctcaaccgc 706 Query: 186 aagaagagaacttgcattcatgaagattgcttgttcattgggtcatacaagaaactctgc 245 |||| ||| |||||||| ||||| | |||| || ||| ||||||| |||||| || Sbjct: 707 aagaggaggacttgcatgcatgagggatgctcttttggtggatcatacagaaaactccgc 766 Query: 246 aagcatgtgaaggccagacacccttcatcaaaacctcgtgaagttgacccggcacgtttg 305 || ||||||| | ||| || ||||||||||| ||||||||| | || | ||| | || Sbjct: 767 aaccatgtgaggtccaatcatccttcatcaaatcctcgtgaaatcgattctgcaagctta 826 Query: 306 gctgagtggaagcagcttgaaagtgcaaaggataggcaggatgcaatcagcatagtcaca 365 |||||||||||| |||||||| || |||||||||||||||||||| |||||| | ||| Sbjct: 827 gctgagtggaaggagcttgaatatgagaaggataggcaggatgcaataagcataattaca 886 Query: 366 ggcttgaatccagggtccatgattattggggactatcttattgaccccaatagtggcagc 425 | |||||||||||||| | || || ||||||||| | ||||||||||| |||| |||| Sbjct: 887 gcattgaatccagggtcaacaatcatgggggactatttcattgaccccaacagtgacagc 946 Query: 426 a 426 | Sbjct: 947 a 947
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 184 bits (93), Expect = 2e-43 Identities = 339/421 (80%) Strand = Plus / Minus Query: 6 tctaactgtcttgagcagttcaaaaatgcttatgtgaaggagaaaccggcaaatgaagta 65 ||||| ||||||||||||||||||||||||||| || || || || || |||| || Sbjct: 63931 tctaattgtcttgagcagttcaaaaatgcttattcgaggggaaagccagcttgtgaatta 63872 Query: 66 tccattgcagtggcagcagctagcaagaagccaaaggatgtggagcttgcttgccctatc 125 || |||||||||| |||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 63871 tcaggtgcagtggcacaagctagcaagaagccacaggagatggagcttgtgtgccctatc 63812 Query: 126 tgccgtggggaagtgaagggctggacagtggttgaaccagctcgtcaatttctcaatcgc 185 ||||||||||| || || || |||||||||||||| ||||| | ||||||||| ||| Sbjct: 63811 tgccgtggggatgttaaaggatggacagtggttgagccagccagaagatttctcaaccgc 63752 Query: 186 aagaagagaacttgcattcatgaagattgcttgttcattgggtcatacaagaaactctgc 245 |||| ||| |||||||| ||||| | |||| || ||| ||||||| |||||| || Sbjct: 63751 aagaggaggacttgcatgcatgagggatgctcttttggtggatcatacagaaaactccgc 63692 Query: 246 aagcatgtgaaggccagacacccttcatcaaaacctcgtgaagttgacccggcacgtttg 305 || ||||||| | ||| || ||||||||||| ||||||||| | || | ||| | || Sbjct: 63691 aaccatgtgaggtccaatcatccttcatcaaatcctcgtgaaatcgattctgcaagctta 63632 Query: 306 gctgagtggaagcagcttgaaagtgcaaaggataggcaggatgcaatcagcatagtcaca 365 |||||||||||| |||||||| || |||||||||||||||||||| |||||| | ||| Sbjct: 63631 gctgagtggaaggagcttgaatatgagaaggataggcaggatgcaataagcataattaca 63572 Query: 366 ggcttgaatccagggtccatgattattggggactatcttattgaccccaatagtggcagc 425 | |||||||||||||| | || || ||||||||| | ||||||||||| |||| |||| Sbjct: 63571 gcattgaatccagggtcaacaatcatgggggactatttcattgaccccaacagtgacagc 63512 Query: 426 a 426 | Sbjct: 63511 a 63511
>ref|XM_466297.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1673 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 537 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 596 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 597 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 656 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 657 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 716 Query: 286 aagttga 292 ||||||| Sbjct: 717 aagttga 723
>ref|XM_506834.1| PREDICTED Oryza sativa (japonica cultivar-group), P0020C11.43 mRNA Length = 1775 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 542 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 601 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 602 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 661 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 662 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 721 Query: 286 aagttga 292 ||||||| Sbjct: 722 aagttga 728
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Minus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 21550228 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 21550169 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 21550168 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 21550109 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 21550108 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 21550049 Query: 286 aagttga 292 ||||||| Sbjct: 21550048 aagttga 21550042
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Minus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 39178 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 39119 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 39118 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 39059 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 39058 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 38999 Query: 286 aagttga 292 ||||||| Sbjct: 38998 aagttga 38992
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Minus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 145155 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 145096 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 145095 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 145036 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 145035 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 144976 Query: 286 aagttga 292 ||||||| Sbjct: 144975 aagttga 144969
>dbj|AK120966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040F07, full insert sequence Length = 1675 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 539 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 598 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 599 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 658 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 659 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 718 Query: 286 aagttga 292 ||||||| Sbjct: 719 aagttga 725
>dbj|AK071355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H20, full insert sequence Length = 1775 Score = 101 bits (51), Expect = 2e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | || |||||||| || || || ||||| ||||| ||||||| Sbjct: 542 tggaacttgcatgccctctttgtcgtggggatgtcaaaggatggactgtggtcgaaccag 601 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 |||| || | ||||||||||||||| ||| | || || ||||| | |||| ||||||| Sbjct: 602 ctcgccagtatctcaatcgcaagaaaagagcctgtatgcatgatggctgctcattcattg 661 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | |||||||| |||| |||||||||||||| ||| || |||||| |||||||||||| Sbjct: 662 gttcatacaaagaactttgcaagcatgtgaattccaagcatccttcagcaaaacctcgtg 721 Query: 286 aagttga 292 ||||||| Sbjct: 722 aagttga 728
>gb|BT018823.1| Zea mays clone EL01N0532E10.d mRNA sequence Length = 1715 Score = 46.1 bits (23), Expect = 0.13 Identities = 146/187 (78%) Strand = Plus / Plus Query: 106 tggagcttgcttgccctatctgccgtggggaagtgaagggctggacagtggttgaaccag 165 |||| ||||| |||||| | |||||||| || || || || ||||| |||||||| || | Sbjct: 568 tggaacttgcctgccctctgtgccgtggagaggttaaaggatggactgtggttgagcctg 627 Query: 166 ctcgtcaatttctcaatcgcaagaagagaacttgcattcatgaagattgcttgttcattg 225 ||||||| | ||| || || || | ||||| |||||| ||||| | |||| ||| || Sbjct: 628 ctcgtcagtatctgaaccggaaaaggagaaattgcatgcatgatgggtgctcattccatg 687 Query: 226 ggtcatacaagaaactctgcaagcatgtgaaggccagacacccttcatcaaaacctcgtg 285 | || || ||| | || |||||||||||||| | | |||||| || |||||||||||| Sbjct: 688 gctcgtataaggagctttgcaagcatgtgaaatcgaagcaccctacagcaaaacctcgtg 747 Query: 286 aagttga 292 ||||||| Sbjct: 748 aagttga 754
>gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosome X, complete sequence Length = 212318 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 atgaagtatccattgcagtggcagc 82 ||||||| ||||||||||||||||| Sbjct: 48737 atgaagtctccattgcagtggcagc 48761
>gb|AC002996.1|AC002996 Homo sapiens 12q24 BAC RPCI11-162P23 (Roswell Park Cancer Institute Human BAC library) complete sequence Length = 114842 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 atgtggagcttgcttgcccta 123 ||||||||||||||||||||| Sbjct: 46785 atgtggagcttgcttgcccta 46805
>emb|AL683827.6| Mouse DNA sequence from clone RP23-473F3 on chromosome X, complete sequence Length = 181878 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 atgaagtatccattgcagtggcagc 82 ||||||| ||||||||||||||||| Sbjct: 140937 atgaagtctccattgcagtggcagc 140961
>ref|XM_509377.1| PREDICTED: Pan troglodytes similar to acyl-Coenzyme A dehydrogenase family, member 10 (LOC452250), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 176 atgtggagcttgcttgccct 157
>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence Length = 114045 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 103161 atgtggagcttgcttgccct 103180
>gb|BC003698.1| Homo sapiens acyl-Coenzyme A dehydrogenase family, member 10, mRNA (cDNA clone IMAGE:3461017) Length = 2879 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 1089 atgtggagcttgcttgccct 1070
>gb|AC123071.3| Mus musculus BAC clone RP23-70P8 from chromosome 13, complete sequence Length = 252384 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tggagcttgcttgccctatctgcc 129 ||||||||||||||||| |||||| Sbjct: 149215 tggagcttgcttgccctttctgcc 149192
>ref|NM_025247.3| Homo sapiens acyl-Coenzyme A dehydrogenase family, member 10 (ACAD10), mRNA Length = 3960 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 1888 atgtggagcttgcttgccct 1869
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tggtggtgatattatgtttt 507 |||||||||||||||||||| Sbjct: 247126 tggtggtgatattatgtttt 247145 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tggtggtgatattatgtttt 507 |||||||||||||||||||| Sbjct: 115979 tggtggtgatattatgtttt 115998
>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the CST5 gene for cystatin D, the CST2 gene for cystatin SA, the CST1 gene for cystatin SN and the CSTP2 gene for cystatin pseudogene 2, complete sequence Length = 203076 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 tggtggtgatattatgtttt 507 |||||||||||||||||||| Sbjct: 90733 tggtggtgatattatgtttt 90714
>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence Length = 189250 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tgagtggaagcagcttgaaa 327 |||||||||||||||||||| Sbjct: 124125 tgagtggaagcagcttgaaa 124144
>emb|AL121894.26|HSA218C14 Human DNA sequence from clone RP11-218C14 on chromosome 20 Contains the 3' end of a novel gene, two genes for novel proteins similar to cystatin 9-like (mouse) (CST9L), the CST9L gene for cystatin 9-like (mouse), a cystatin 9-like (mouse) pseudogene, the CST3 gene for cystatin C, a novel gene and a CpG island, complete sequence Length = 141079 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 tggtggtgatattatgtttt 507 |||||||||||||||||||| Sbjct: 138890 tggtggtgatattatgtttt 138871
>emb|CR859916.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0414 (from clone DKFZp469F0414) Length = 4346 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 1916 atgtggagcttgcttgccct 1897
>dbj|AK097425.1| Homo sapiens cDNA FLJ40106 fis, clone TESTI2006667, moderately similar to Probable acyl-CoA dehydrogenase Length = 2326 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 882 atgtggagcttgcttgccct 863
>dbj|AK092356.1| Homo sapiens cDNA FLJ35037 fis, clone OCBBF2016729, moderately similar to Probable acyl-CoA dehydrogenase - Deinococcus radiodurans Length = 2951 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 1917 atgtggagcttgcttgccct 1898
>gb|AC109812.5| Homo sapiens BAC clone RP13-578N3 from 4, complete sequence Length = 49372 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gtcatacaagaaactctgca 246 |||||||||||||||||||| Sbjct: 33661 gtcatacaagaaactctgca 33642
>emb|CR591627.1| full-length cDNA clone CS0DK002YE05 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1674 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 165 atgtggagcttgcttgccct 146
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tggtgatattatgttttctg 510 |||||||||||||||||||| Sbjct: 506168 tggtgatattatgttttctg 506149
>gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosome 16, complete sequence Length = 192526 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 agcatgtgaaggccagacac 266 |||||||||||||||||||| Sbjct: 71537 agcatgtgaaggccagacac 71556
>gb|AY323912.1| Homo sapiens ACAD 10 mRNA, complete cds Length = 3960 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 1888 atgtggagcttgcttgccct 1869
>emb|AL109985.5|CNS018P2 Human chromosome 14 DNA sequence BAC R-370E23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 186548 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 taactgtcttgagcagttca 27 |||||||||||||||||||| Sbjct: 4833 taactgtcttgagcagttca 4852
>emb|AL832043.1|HSM803350 Homo sapiens mRNA; cDNA DKFZp313G1710 (from clone DKFZp313G1710) Length = 4102 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtggagcttgcttgccct 122 |||||||||||||||||||| Sbjct: 2003 atgtggagcttgcttgccct 1984
>gb|AC151054.2| Mus musculus BAC clone RP23-147K16 from 13, complete sequence Length = 220038 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tggagcttgcttgccctatctgcc 129 ||||||||||||||||| |||||| Sbjct: 160967 tggagcttgcttgccctttctgcc 160990
>emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-16N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 145250 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 taactgtcttgagcagttca 27 |||||||||||||||||||| Sbjct: 133899 taactgtcttgagcagttca 133918 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,212,004 Number of Sequences: 3902068 Number of extensions: 5212004 Number of successful extensions: 90332 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90212 Number of HSP's gapped (non-prelim): 108 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)