ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39d13 |
|---|---|
| Clone Library Name | barley_pub |
>AAAS_MOUSE (P58742) Aladin (Adracalin)| Length = 546 Score = 80.5 bits (197), Expect = 4e-15 Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 2/196 (1%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK 261 +W+PH + A D + V++ ++ SL Q+ V A+ W+P S ++AV C+ Sbjct: 158 AWHPHTNKFAVALLDDSIRVYN---ANSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQ 214 Query: 262 GGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDG 441 I +W+ + +S P Q VL V++L W P+G Sbjct: 215 SCILIWT-------------LDPTSLSTRPSSGCAQ-----VLSHPGHTPVTSLAWAPNG 256 Query: 442 RYLASASCNGQSFTIWDVSEGLGTPIR--RGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 +L SAS +WDVS P+ RG ++ + WSP G L F +WE Sbjct: 257 GWLLSASPVDAVILVWDVSTETCVPLPWFRG-GGVTNLLWSPDGSKVLATTPSAVFRVWE 315 Query: 616 TNTWTSEPWSSSNGIC 663 WT E W + +G C Sbjct: 316 AQMWTCEAWPTLSGRC 331
>AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)| Length = 546 Score = 78.6 bits (192), Expect = 2e-14 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 2/196 (1%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK 261 +W+PH + A D V V++ + SL Q+ V ++ W+P S ++AV C+ Sbjct: 158 AWHPHTNKFAVALLDDSVRVYNASSTIVP---SLKHRLQRNVASLAWKPLSASVLAVACQ 214 Query: 262 GGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDG 441 I +W+ + +S P Q VL V++L W P G Sbjct: 215 SCILIWT-------------LDPTSLSTRPSSGCAQ-----VLSHPGHTPVTSLAWAPSG 256 Query: 442 RYLASASCNGQSFTIWDVSEGLGTPIR--RGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 L SAS + +WDVS P+ RG ++ + WSP G L F +WE Sbjct: 257 GRLLSASPVDAAIRVWDVSTETCVPLPWFRG-GGVTNLLWSPDGSKILATTPSAVFRVWE 315 Query: 616 TNTWTSEPWSSSNGIC 663 WT E W + +G C Sbjct: 316 AQMWTCERWPTLSGRC 331
>NLE1_PONPY (Q5RFF8) Notchless homolog 1| Length = 484 Score = 52.8 bits (125), Expect = 1e-06 Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 2/183 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+++P LA SG V D +C H+ V +I W P+ GK +A GC Sbjct: 119 VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK---GHRHWVLSISWSPD-GKKLASGC 174 Query: 259 KGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKP 435 K G I LW S V +G +WI G S E + A P Sbjct: 175 KNGQILLWDPSTGKQVGRTLAG-------------HSKWI-----TGLSWEPLHA---NP 213 Query: 436 DGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + RY+AS+S +G S IWD + G I G S++ +RW G +A D T +W Sbjct: 214 ECRYVASSSKDG-SVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 271 Query: 613 ETN 621 + Sbjct: 272 RAH 274 Score = 40.8 bits (94), Expect = 0.004 Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 1/167 (0%) Frame = +1 Query: 115 VSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYP 294 VSG D T+ + ++ K+ + + HQ + + + P+S + + I LW Sbjct: 344 VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWD---- 399 Query: 295 GNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQ 474 G TG+++ LRG V + W D R L S S + Sbjct: 400 --------------------GRTGKYLA--SLRG-HVAAVYQIAWSADSRLLVSGS-SDS 435 Query: 475 SFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + +WDV ++ L + + V WSP G + D +W Sbjct: 436 TLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 482 Score = 40.0 bits (92), Expect = 0.006 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRW-----SPSGD 570 V ++ W PDG+ LAS NGQ +WD S G +G + I+ + W +P Sbjct: 158 VLSISWSPDGKKLASGCKNGQ-ILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECR 216 Query: 571 YFLTAKFDGTFHLWETNTWTSE 636 Y ++ DG+ +W+T E Sbjct: 217 YVASSSKDGSVRIWDTTAGRCE 238 Score = 35.4 bits (80), Expect = 0.16 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTA 585 L++ + + PD R +ASAS + +S +WD G RG ++++ + WS ++ Sbjct: 373 LINQVLFSPDSRIVASASFD-KSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSG 431 Query: 586 KFDGTFHLWE 615 D T +W+ Sbjct: 432 SSDSTLKVWD 441 Score = 33.1 bits (74), Expect = 0.78 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFL 579 +E V ++ + P G+YLAS S + WD+S +G + + WSP G Sbjct: 113 SEAVISVAFSPTGKYLASGS-GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA 171 Query: 580 TAKFDGTFHLWETNT 624 + +G LW+ +T Sbjct: 172 SGCKNGQILLWDPST 186
>NLE1_HUMAN (Q9NVX2) Notchless homolog 1| Length = 484 Score = 52.8 bits (125), Expect = 1e-06 Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 2/183 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+++P LA SG V D +C H+ V +I W P+ GK +A GC Sbjct: 119 VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK---GHRHWVLSISWSPD-GKKLASGC 174 Query: 259 KGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKP 435 K G I LW S V +G +WI G S E + A P Sbjct: 175 KNGQILLWDPSTGKQVGRTLAG-------------HSKWI-----TGLSWEPLHA---NP 213 Query: 436 DGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + RY+AS+S +G S IWD + G I G S++ +RW G +A D T +W Sbjct: 214 ECRYVASSSKDG-SVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 271 Query: 613 ETN 621 + Sbjct: 272 RAH 274 Score = 40.8 bits (94), Expect = 0.004 Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 1/167 (0%) Frame = +1 Query: 115 VSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYP 294 VSG D T+ + ++ K+ + + HQ + + + P+S + + I LW Sbjct: 344 VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWD---- 399 Query: 295 GNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQ 474 G TG+++ LRG V + W D R L S S + Sbjct: 400 --------------------GRTGKYLA--SLRG-HVAAVYQIAWSADSRLLVSGS-SDS 435 Query: 475 SFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + +WDV ++ L + + V WSP G + D +W Sbjct: 436 TLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 482 Score = 40.0 bits (92), Expect = 0.006 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRW-----SPSGD 570 V ++ W PDG+ LAS NGQ +WD S G +G + I+ + W +P Sbjct: 158 VLSISWSPDGKKLASGCKNGQ-ILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECR 216 Query: 571 YFLTAKFDGTFHLWETNTWTSE 636 Y ++ DG+ +W+T E Sbjct: 217 YVASSSKDGSVRIWDTTAGRCE 238 Score = 35.4 bits (80), Expect = 0.16 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTA 585 L++ + + PD R +ASAS + +S +WD G RG ++++ + WS ++ Sbjct: 373 LINQVLFSPDSRIVASASFD-KSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSG 431 Query: 586 KFDGTFHLWE 615 D T +W+ Sbjct: 432 SSDSTLKVWD 441 Score = 33.1 bits (74), Expect = 0.78 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFL 579 +E V ++ + P G+YLAS S + WD+S +G + + WSP G Sbjct: 113 SEAVISVAFSPTGKYLASGS-GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA 171 Query: 580 TAKFDGTFHLWETNT 624 + +G LW+ +T Sbjct: 172 SGCKNGQILLWDPST 186
>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800| Length = 1258 Score = 52.4 bits (124), Expect = 1e-06 Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 19/214 (8%) Frame = +1 Query: 40 CNPKLLEEFD-TKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLT-SEHQKEVKA 213 C LLE D V ++P +A +G TV + S G+ C T SEH ++ Sbjct: 1012 CFQILLEHTDWVYAVVFHPQGKIIA--TGSADCTVKLWNISTGQ--CLKTLSEHSDKILG 1067 Query: 214 IEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAF--PRG------STGQ 369 + W P+ + + + LW G + G ++ + A P G ST Q Sbjct: 1068 MAWSPDGQLLASASADQSVRLWDCC-TGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQ 1126 Query: 370 WILV-DVLRGSS-------TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRR 525 + + D +G T V + + PDG+ LASAS + Q+ IWDV+ G I Sbjct: 1127 TVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASAS-HDQTVRIWDVNTGKCHHICI 1185 Query: 526 GLSS-ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 G + +S V +SP G+ + D T +W T Sbjct: 1186 GHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKT 1219 Score = 37.7 bits (86), Expect = 0.032 Identities = 42/191 (21%), Positives = 74/191 (38%), Gaps = 3/191 (1%) Frame = +1 Query: 61 EFDTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLT-SEHQKEVKAIEWRPNSG 237 E + V+++P LA SG + + D +D +C T + H V+ + + P+ Sbjct: 726 EHEVFSVAFHPDGETLASASGDKTIKLWDIQDG----TCLQTLTGHTDWVRCVAFSPDGN 781 Query: 238 KMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVS 417 + + I LW S + ++KS T V Sbjct: 782 TLASSAADHTIKLWDVSQGKCLRTLKS---------------------------HTGWVR 814 Query: 418 ALCWKPDGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTAKF 591 ++ + DG+ LAS S ++ IW+ G L T I +S+ + +SP ++ Sbjct: 815 SVAFSADGQTLASGS-GDRTIKIWNYHTGECLKTYIGH-TNSVYSIAYSPDSKILVSGSG 872 Query: 592 DGTFHLWETNT 624 D T LW+ T Sbjct: 873 DRTIKLWDCQT 883 Score = 34.7 bits (78), Expect = 0.27 Identities = 43/200 (21%), Positives = 74/200 (37%), Gaps = 18/200 (9%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVG 255 ++++P L SG + + D + C T H EV ++ + P+ + V Sbjct: 858 IAYSPDSKILVSGSGDRTIKLWDCQT----HICIKTLHGHTNEVCSVAFSPDGQTLACVS 913 Query: 256 CKGGICLWSA-------SYPGNVASVKSGVTSSSFGAFPRGSTGQWI---------LVDV 387 + LW+ ++ GN S GS + + + Sbjct: 914 LDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISS 973 Query: 388 LRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPI-RRGLSSISLVRWSPS 564 L G T+ + + + PD + LASAS + S +W++S G I + V + P Sbjct: 974 LEGH-TDFIYGIAFSPDSQTLASASTD-SSVRLWNISTGQCFQILLEHTDWVYAVVFHPQ 1031 Query: 565 GDYFLTAKFDGTFHLWETNT 624 G T D T LW +T Sbjct: 1032 GKIIATGSADCTVKLWNIST 1051 Score = 33.9 bits (76), Expect = 0.46 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 1/167 (0%) Frame = +1 Query: 133 VTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASV 312 V +HD + ++ SC + +E + + + P + + +W V Sbjct: 621 VNLHDVDFANSDLSCCVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWE---------V 671 Query: 313 KSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD 492 KSG L+ + RG S V + + PDG LAS + ++ +W Sbjct: 672 KSGK-----------------LLLICRGHSN-WVRFVVFSPDGEILASCGAD-ENVKLWS 712 Query: 493 VSEGLGTPIRRGLS-SISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 V +G+ G + V + P G+ +A D T LW+ T Sbjct: 713 VRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGT 759 Score = 30.4 bits (67), Expect = 5.1 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEG 504 T LVS++ + PDG +AS S Q+ IW+V G Sbjct: 1188 THLVSSVAFSPDGEVVASGS-QDQTVRIWNVKTG 1220
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 51.6 bits (122), Expect = 2e-06 Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 19/188 (10%) Frame = +1 Query: 118 SGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYP 294 SG D TV ++ S G +C T + H V+++ + P+ + + G + LW S Sbjct: 1049 SGSDDQTVRLWDISSG--NCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDIS-S 1105 Query: 295 GNVASVKSGVTS-------SSFGA-FPRGSTGQWI-LVDV--------LRGSSTELVSAL 423 GN G TS S G GS+ Q + L D+ L+G T V+A+ Sbjct: 1106 GNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGH-TNWVNAV 1164 Query: 424 CWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGT 600 + PDG LAS S Q+ +WD+S I +G +S ++ V ++P G + D T Sbjct: 1165 AFSPDGATLASGS-GDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQT 1223 Query: 601 FHLWETNT 624 LWE N+ Sbjct: 1224 VRLWEINS 1231 Score = 45.8 bits (107), Expect = 1e-04 Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 16/198 (8%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+++P LA SG V + D S + + H V ++ + P+ + + Sbjct: 1164 VAFSPDGATLASGSGDQTVRLWDISSS---KCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220 Query: 259 KGGICLWS-------ASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSS----- 402 + LW ++ G+ + V S V + GS+ + + + + S Sbjct: 1221 DQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF 1280 Query: 403 ---TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGD 570 T V+++ + PDG LAS S Q+ +W++S +G +S +S V +SP G Sbjct: 1281 QGHTNWVNSVAFNPDGSMLASGS-GDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGT 1339 Query: 571 YFLTAKFDGTFHLWETNT 624 + D T LW ++ Sbjct: 1340 MLASGSDDQTVRLWSISS 1357 Score = 42.0 bits (97), Expect = 0.002 Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 18/200 (9%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVG 255 V +NP LA SG TV ++ S K C T + H V ++ + P+ G M+A G Sbjct: 1248 VVFNPDGSMLA--SGSSDKTVRLWDISSSK--CLHTFQGHTNWVNSVAFNPD-GSMLASG 1302 Query: 256 CKGG-ICLWSAS-------YPGNVASVKSGVTSSSFGAFPRGSTGQWI-LVDVLRGSS-- 402 + LW S + G+ + V S S GS Q + L + G Sbjct: 1303 SGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLY 1362 Query: 403 -----TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPS 564 T V ++ + PDG LAS S Q+ +W +S G +G ++ + + +SP Sbjct: 1363 TFLGHTNWVGSVIFSPDGAILASGS-GDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPD 1421 Query: 565 GDYFLTAKFDGTFHLWETNT 624 G + D T LW ++ Sbjct: 1422 GTLLASGSDDQTVRLWNISS 1441
>CAF1B_MOUSE (Q9D0N7) Chromatin assembly factor 1 subunit B (CAF-1 subunit B)| (Chromatin assembly factor I p60 subunit) (CAF-I 60 kDa subunit) (CAF-Ip60) Length = 572 Score = 51.2 bits (121), Expect = 3e-06 Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 9/162 (5%) Frame = +1 Query: 160 DGK---ESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTS 330 DGK E S + H K V + + P + + G I LW + + Sbjct: 51 DGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKMNDSKEPEQI------ 104 Query: 331 SSFGAFPRGSTGQ-----WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 AF Q W +V LRG E V +CW DG + SAS + + IWDV Sbjct: 105 ----AFQDEEEAQLNKENWTVVKTLRGH-LEDVYDICWATDGNLMTSASVDN-TVIIWDV 158 Query: 496 SEGLGTPI-RRGLSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 S+G I S + V W P G Y T D ++ T Sbjct: 159 SKGQKISIFNEHKSYVQGVTWDPLGQYIATLSCDRVLRIYNT 200
>NLE1_MOUSE (Q8VEJ4) Notchless homolog 1| Length = 484 Score = 50.8 bits (120), Expect = 4e-06 Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 2/183 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+++P LA SG V D +C H+ V +I W P+ GK +A GC Sbjct: 119 VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK---GHRHWVLSISWSPD-GKKLASGC 174 Query: 259 KGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKP 435 K G I LW S V +G +WI G S E L P Sbjct: 175 KNGQILLWDPSTGLQVGRTLTG-------------HSKWI-----TGLSWE---PLHMNP 213 Query: 436 DGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + RY+AS+S +G S +WD + G I G S++ +RW G +A D T +W Sbjct: 214 ECRYVASSSKDG-SVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 271 Query: 613 ETN 621 + Sbjct: 272 RAH 274 Score = 43.1 bits (100), Expect = 8e-04 Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 1/167 (0%) Frame = +1 Query: 115 VSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYP 294 VSG D T+ + ++ K+ + + HQ + + + P+S + + I LW Sbjct: 344 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD---- 399 Query: 295 GNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQ 474 G TG+++ LRG V + W D R L S S + Sbjct: 400 --------------------GRTGKYLAS--LRGH-VAAVYQIAWSADSRLLVSGSSDS- 435 Query: 475 SFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + +WDV ++ L T + + V WSP G + D +W Sbjct: 436 TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 482 Score = 40.8 bits (94), Expect = 0.004 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGL--GTPIRRGLSSISLVRW-----SPSGD 570 V ++ W PDG+ LAS NGQ +WD S GL G + I+ + W +P Sbjct: 158 VLSISWSPDGKKLASGCKNGQ-ILLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECR 216 Query: 571 YFLTAKFDGTFHLWETNTWTSE 636 Y ++ DG+ +W+T E Sbjct: 217 YVASSSKDGSVRVWDTTAGRCE 238 Score = 33.1 bits (74), Expect = 0.78 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFL 579 +E V ++ + P G+YLAS S + WD+S +G + + WSP G Sbjct: 113 SEAVISVAFSPTGKYLASGS-GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA 171 Query: 580 TAKFDGTFHLWETNT 624 + +G LW+ +T Sbjct: 172 SGCKNGQILLWDPST 186
>WDS_DROME (Q9V3J8) Protein will die slowly| Length = 361 Score = 50.4 bits (119), Expect = 5e-06 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 2/181 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+W+ L VSG D T+ +E S GK +L H V + P S +++ Sbjct: 120 VAWSSDSRLL--VSGSDDKTLKVWELSTGKSLKTLKG-HSNYVFCCNFNPQSNLIVSGSF 176 Query: 259 KGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPD 438 + +W V++G + A ++ VSA+ + D Sbjct: 177 DESVRIWD---------VRTGKCLKTLPAH------------------SDPVSAVHFNRD 209 Query: 439 GRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 G + S+S +G IWD + G L T I +S V++SP+G Y L A D T LW Sbjct: 210 GSLIVSSSYDGLC-RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 268 Query: 613 E 615 + Sbjct: 269 D 269 Score = 38.5 bits (88), Expect = 0.019 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H K V A+++ PN + + I +W A Y G SG Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKLG------------- 116 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLV 549 +S + W D R L S S + ++ +W++S G +G S+ + Sbjct: 117 -------------ISDVAWSSDSRLLVSGS-DDKTLKVWELSTGKSLKTLKGHSNYVFCC 162 Query: 550 RWSPSGDYFLTAKFDGTFHLWETNT 624 ++P + ++ FD + +W+ T Sbjct: 163 NFNPQSNLIVSGSFDESVRIWDVRT 187 Score = 38.1 bits (87), Expect = 0.024 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Frame = +1 Query: 280 SASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASA 459 S PG S S ++ S + T ++ L T+ VSA+ + P+G +LAS+ Sbjct: 36 SVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLA-----GHTKAVSAVKFSPNGEWLASS 90 Query: 460 SCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFLTAKFDGTFHLWETNTWTS 633 S + + IW +G G IS V WS ++ D T +WE +T S Sbjct: 91 SAD-KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKS 148
>CAF1B_HUMAN (Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B)| (Chromatin assembly factor I p60 subunit) (CAF-I 60 kDa subunit) (CAF-Ip60) (M-phase phosphoprotein 7) Length = 559 Score = 50.4 bits (119), Expect = 5e-06 Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 9/160 (5%) Frame = +1 Query: 160 DGK---ESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTS 330 DGK E S + H K V + + P + + G I LW + + Sbjct: 51 DGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQI------ 104 Query: 331 SSFGAFPRGSTGQ-----WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 AF Q W +V LRG E V +CW DG +ASAS + + IWDV Sbjct: 105 ----AFQDEDEAQLNKENWTVVKTLRGH-LEDVYDICWATDGNLMASASVDNTAI-IWDV 158 Query: 496 SEGLGTPI-RRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 S+G I S + V W P G Y T D ++ Sbjct: 159 SKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVY 198
>NLE1_BOVIN (Q58D20) Notchless homolog 1| Length = 485 Score = 50.1 bits (118), Expect = 6e-06 Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 7/188 (3%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+++P LA SG V D +C H+ V +I W P+ GK +A GC Sbjct: 120 VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQ---GHRHWVLSISWSPD-GKKLASGC 175 Query: 259 KGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWK- 432 K G I LW S T G R TG ++ ++AL W+ Sbjct: 176 KNGQILLWDPS------------TGKQVG---RALTGH-----------SKWITALSWEP 209 Query: 433 ----PDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDG 597 P+ RY+AS+S +G S +WD + G G S++ +RW G +A D Sbjct: 210 LHANPECRYVASSSKDG-SVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDR 267 Query: 598 TFHLWETN 621 T +W + Sbjct: 268 TIKVWRAH 275 Score = 43.9 bits (102), Expect = 4e-04 Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 1/167 (0%) Frame = +1 Query: 115 VSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYP 294 VSG D T+ + ++ K+ + + HQ + + + P+S + + I LW Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD---- 400 Query: 295 GNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQ 474 G TG+++ LRG V + W D R L S S + Sbjct: 401 --------------------GRTGKYLAS--LRGH-VAAVYQIAWSADSRLLVSGSSDS- 436 Query: 475 SFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + +WDV ++ L T + + V WSP G + D +W Sbjct: 437 TLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483 Score = 40.8 bits (94), Expect = 0.004 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRW-----SPSGD 570 V ++ W PDG+ LAS NGQ +WD S G +G + I+ + W +P Sbjct: 159 VLSISWSPDGKKLASGCKNGQ-ILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECR 217 Query: 571 YFLTAKFDGTFHLWETNTWTSE 636 Y ++ DG+ +W+T E Sbjct: 218 YVASSSKDGSVRVWDTTAGRCE 239 Score = 33.1 bits (74), Expect = 0.78 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTP------IRRGLSSISLVRWSPS 564 +E V ++ + P G+YLAS S + WD+S TP R + SIS WSP Sbjct: 114 SEAVISVAFSPTGKYLASGS-GDTTVRFWDLS--TETPHFTCQGHRHWVLSIS---WSPD 167 Query: 565 GDYFLTAKFDGTFHLWETNT 624 G + +G LW+ +T Sbjct: 168 GKKLASGCKNGQILLWDPST 187
>TIPD_DICDI (O15736) Protein tipD| Length = 612 Score = 49.7 bits (117), Expect = 8e-06 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEG----LGTPIRRGLSSISLVRWSPSGDYFLTAKFD 594 W PDGRY+AS S +G S IWD + G + T + SS+ WSP + F++A D Sbjct: 547 WSPDGRYIASGSIDG-SICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLANIFISADKD 605 Query: 595 GTFHLWE 615 WE Sbjct: 606 KNIIQWE 612 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 +T ++ N H L + + T+ F+D + + + T W P+ G+ I Sbjct: 504 NTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKA--------SWSPD-GRYI 554 Query: 247 AVGC-KGGICLWSAS 288 A G G IC+W A+ Sbjct: 555 ASGSIDGSICIWDAT 569
>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1| Length = 1356 Score = 49.3 bits (116), Expect = 1e-05 Identities = 50/224 (22%), Positives = 85/224 (37%), Gaps = 1/224 (0%) Frame = +1 Query: 1 AIAESFKQMLFPSCNPKLLEEFDTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCS 180 A +S + +F P + + WN C + G + +DG+ S Sbjct: 802 APTDSMIKKIFKKEEPGWISTISVVEAEWNA---CTQTLEGHGSSVLSVAFSADGQRVAS 858 Query: 181 LTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGS 360 + + K +K + +G G G + WS ++ + V SG + + S Sbjct: 859 GSDD--KTIKIWDTASGTGTQTLEGHGGSV--WSVAFSPDRERVASGSDDKTIKIWDAAS 914 Query: 361 TGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGL-SS 537 L G V ++ + PDG+ +AS S + + IWD + G T G SS Sbjct: 915 G---TCTQTLEGHGGR-VQSVAFSPDGQRVASGS-DDHTIKIWDAASGTCTQTLEGHGSS 969 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSSSNGICNW 669 + V +SP G + D T +W+T + T +G W Sbjct: 970 VLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVW 1013 Score = 48.5 bits (114), Expect = 2e-05 Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%) Frame = +1 Query: 118 SGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS-- 288 SG D T+ ++ G +C+ T E H V ++ + P+ ++ + G I +W A+ Sbjct: 1068 SGSDDHTIKIWDAVSG--TCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG 1125 Query: 289 -----YPGNVASVKSGVTSSSFGAFPRGSTGQWILV-DVLRGSSTEL-------VSALCW 429 G+ V S S GS I + D G+ T+ V ++ + Sbjct: 1126 TCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAF 1185 Query: 430 KPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFH 606 PDG+ +AS S + ++ IWD + G T G + V +SP G + D T Sbjct: 1186 SPDGQRVASGSSD-KTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIK 1244 Query: 607 LWETNTWT 630 +W+T + T Sbjct: 1245 IWDTASGT 1252 Score = 48.5 bits (114), Expect = 2e-05 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 17/214 (7%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVG 255 V+++P + +A SG D T+ ++ + G +C+ T E H V+++ + P+ ++ + Sbjct: 889 VAFSPDRERVA--SGSDDKTIKIWDAASG--TCTQTLEGHGGRVQSVAFSPDGQRVASGS 944 Query: 256 CKGGICLWSAS-------YPGNVASVKSGVTSSSFGAFPRGSTGQWILV-DVLRGSSTEL 411 I +W A+ G+ +SV S S GS + I + D G+ T+ Sbjct: 945 DDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQT 1004 Query: 412 VS-------ALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSG 567 + ++ + PDG+ +AS S + ++ IWD + G T G + V +SP G Sbjct: 1005 LEGHGGSVWSVAFSPDGQRVASGS-DDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDG 1063 Query: 568 DYFLTAKFDGTFHLWETNTWTSEPWSSSNGICNW 669 + D T +W+ + T +G W Sbjct: 1064 QRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVW 1097 Score = 48.1 bits (113), Expect = 2e-05 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 17/203 (8%) Frame = +1 Query: 73 KKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIA 249 + V+++P +A SG D T+ ++ + G +C+ T E H V ++ + P+ ++ + Sbjct: 929 QSVAFSPDGQRVA--SGSDDHTIKIWDAASG--TCTQTLEGHGSSVLSVAFSPDGQRVAS 984 Query: 250 VGCKGGICLWSAS-------YPGNVASVKSGVTSSSFGAFPRGSTGQWILV-DVLRGSST 405 I +W + G+ SV S S GS + I + D G+ T Sbjct: 985 GSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCT 1044 Query: 406 EL-------VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSP 561 + V ++ + PDG+ +AS S + + IWD G T G S+ V +SP Sbjct: 1045 QTLEGHGGWVQSVVFSPDGQRVASGS-DDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSP 1103 Query: 562 SGDYFLTAKFDGTFHLWETNTWT 630 G + DGT +W+ + T Sbjct: 1104 DGQRVASGSIDGTIKIWDAASGT 1126 Score = 47.4 bits (111), Expect = 4e-05 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 17/188 (9%) Frame = +1 Query: 118 SGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS-- 288 SG T+ ++ + G +C+ T E H V ++ + P+ ++ + I +W + Sbjct: 984 SGSGDKTIKIWDTASG--TCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG 1041 Query: 289 -----YPGNVASVKSGVTSSSFGAFPRGSTGQWILV-DVLRGSSTELVS-------ALCW 429 G+ V+S V S GS I + D + G+ T+ + ++ + Sbjct: 1042 TCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAF 1101 Query: 430 KPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFH 606 PDG+ +AS S +G + IWD + G T G + V +SP G + DGT Sbjct: 1102 SPDGQRVASGSIDG-TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIK 1160 Query: 607 LWETNTWT 630 +W+ + T Sbjct: 1161 IWDAASGT 1168
>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124| Length = 1683 Score = 49.3 bits (116), Expect = 1e-05 Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 + KV+++P LA S + TV + SDGK +L H EV + + P+ + Sbjct: 1448 EVNKVNFSPDGKTLASASRDN--TVKLWNVSDGKFKKTLKG-HTDEVFWVSFSPDGKIIA 1504 Query: 247 AVGCKGGICLWSASYPGN-----------VASVKSGVTSSSFGAFPRGSTGQ-WI----- 375 + I LW S+ GN V SV S + T + W Sbjct: 1505 SASADKTIRLWD-SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGH 1563 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRW 555 L+ G S + S+ + PDGRY+ASAS ++ IW + L T + + + + + Sbjct: 1564 LLHTFSGHSNVVYSS-SFSPDGRYIASAS-EDKTVKIWQIDGHLLTTLPQHQAGVMSAIF 1621 Query: 556 SPSGDYFLTAKFDGTFHLWETNTW---TSEPWSSSNGICNW 669 SP G ++ D T +W ++ TS+ + CNW Sbjct: 1622 SPDGKTLISGSLDTTTKIWRFDSQQAKTSQMNTLVMSACNW 1662 Score = 47.4 bits (111), Expect = 4e-05 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 3/187 (1%) Frame = +1 Query: 106 LAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAV--GCKGGICLW 279 L ++G +Q + + DGK S +S+H ++ W SG+++ G G+ Sbjct: 1148 LKTITGHEQTVNNVYFSPDGKNLASASSDHSIKL----WDTTSGQLLMTLTGHSAGVITV 1203 Query: 280 SASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASA 459 S G ++ +G + + R G+ L+ L G + V++L + PDG+ LASA Sbjct: 1204 RFSPDGQ--TIAAGSEDKTVKLWHR-QDGK--LLKTLNGHQ-DWVNSLSFSPDGKTLASA 1257 Query: 460 SCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 S + ++ +W +++G L ++ S+ V +S G +A D T LW + E Sbjct: 1258 SAD-KTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELE 1316 Query: 637 PWSSSNG 657 ++ +G Sbjct: 1317 TFTGHSG 1323 Score = 37.0 bits (84), Expect = 0.054 Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 16/159 (10%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASY--PGNVASVKSGVTSSSF--------G 342 H V A+ + P+S + + I LW P V + SGV + SF Sbjct: 1321 HSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIAT 1380 Query: 343 AFPRGSTGQW-----ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGL 507 A G+ W L+ L G+ + + + P G +ASA+ + ++ IW V +G Sbjct: 1381 AGADGNIQLWHSQDGSLLKTLPGNKA--IYGISFTPQGDLIASANAD-KTVKIWRVRDGK 1437 Query: 508 GTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWETN 621 G + ++ V +SP G +A D T LW + Sbjct: 1438 ALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVS 1476
>WDR39_HUMAN (O76071) WD-repeat protein 39 (Ciao 1 protein)| Length = 339 Score = 48.9 bits (115), Expect = 1e-05 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 6/189 (3%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 ++WNP LA G ++ + E L+ HQ+ V+ + W P + + Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 Query: 259 KGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPD 438 C+W + + + V L G E V ++ W P Sbjct: 82 DATTCIW------------------------KKNQDDFECVTTLEGHENE-VKSVAWAPS 116 Query: 439 GRYLASASCNGQSFTIWDVSE----GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFH 606 G LA+ S +S +W+V E + + + V W PS + +A +D T Sbjct: 117 GNLLATCS-RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175 Query: 607 LW--ETNTW 627 L+ E + W Sbjct: 176 LYREEEDDW 184 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = +1 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG---LGTPIRRGLSSI 540 WI VL V + W P G YLASAS + + IW ++ T + + + Sbjct: 50 WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT-CIWKKNQDDFECVTTLEGHENEV 108 Query: 541 SLVRWSPSGDYFLTAKFDGTFHLWETN 621 V W+PSG+ T D + +WE + Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVD 135 Score = 42.0 bits (97), Expect = 0.002 Identities = 29/121 (23%), Positives = 50/121 (41%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D K V W+P + LA S D V ++ E+ D C+ H+ V ++ + P+ ++ Sbjct: 152 DVKHVVWHPSQELLASASYDDTVKLYR-EEEDDWVCCATLEGHESTVWSLAFDPSGQRLA 210 Query: 247 AVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALC 426 + + +W PGN + GV S GS W + L G + + + Sbjct: 211 SCSDDRTVRIWRQYLPGN----EQGVACS-------GSDPSWKCICTLSGFHSRTIYDIA 259 Query: 427 W 429 W Sbjct: 260 W 260 Score = 40.4 bits (93), Expect = 0.005 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = +1 Query: 421 LCWKPDGRYLASASCNG-QSFTIWDVSEGLGTPIRRGLS-----SISLVRWSPSGDYFLT 582 L W P G LAS C G + IW +EG + LS ++ V WSP G+Y + Sbjct: 22 LAWNPAGTLLAS--CGGDRRIRIWG-TEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS 78 Query: 583 AKFDGTFHLWETN 621 A FD T +W+ N Sbjct: 79 ASFDATTCIWKKN 91
>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| (WD-repeat protein BIG-3) Length = 334 Score = 48.1 bits (113), Expect = 2e-05 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 3/182 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVG 255 V+W+ + L VS D T+ ++ S GK C T + H V + P S +++ Sbjct: 93 VAWSSDSNLL--VSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGS 148 Query: 256 CKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKP 435 + +W VK+G + A ++ VSA+ + Sbjct: 149 FDESVRIWD---------VKTGKCLKTLPAH------------------SDPVSAVHFNR 181 Query: 436 DGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHL 609 DG + S+S +G IWD + G L T I +S V++SP+G Y L A D T L Sbjct: 182 DGSLIVSSSYDGLC-RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240 Query: 610 WE 615 W+ Sbjct: 241 WD 242 Score = 39.3 bits (90), Expect = 0.011 Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H K V ++++ PN + + I +W A Y G SG Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKLG------------- 89 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLV 549 +S + W D L SAS + ++ IWDVS G +G S+ + Sbjct: 90 -------------ISDVAWSSDSNLLVSAS-DDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135 Query: 550 RWSPSGDYFLTAKFDGTFHLWETNT 624 ++P + ++ FD + +W+ T Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKT 160
>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| Length = 334 Score = 48.1 bits (113), Expect = 2e-05 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 3/182 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVG 255 V+W+ + L VS D T+ ++ S GK C T + H V + P S +++ Sbjct: 93 VAWSSDSNLL--VSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGS 148 Query: 256 CKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKP 435 + +W VK+G + A ++ VSA+ + Sbjct: 149 FDESVRIWD---------VKTGKCLKTLPAH------------------SDPVSAVHFNR 181 Query: 436 DGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHL 609 DG + S+S +G IWD + G L T I +S V++SP+G Y L A D T L Sbjct: 182 DGSLIVSSSYDGLC-RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240 Query: 610 WE 615 W+ Sbjct: 241 WD 242 Score = 39.3 bits (90), Expect = 0.011 Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H K V ++++ PN + + I +W A Y G SG Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKLG------------- 89 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLV 549 +S + W D L SAS + ++ IWDVS G +G S+ + Sbjct: 90 -------------ISDVAWSSDSNLLVSAS-DDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135 Query: 550 RWSPSGDYFLTAKFDGTFHLWETNT 624 ++P + ++ FD + +W+ T Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKT 160
>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4| Length = 376 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 2/181 (1%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 ++W+ C+ VS D T+ FE + + +L H V + P S +++ Sbjct: 135 IAWSSDSRCV--VSASDDKTLKIFEIVTSRMTKTLKG-HNNYVFCCNFNPQSSLVVSGSF 191 Query: 259 KGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPD 438 + +W VK+G+ + A ++ VSA+ + D Sbjct: 192 DESVRIWD---------VKTGMCIKTLPAH------------------SDPVSAVSFNRD 224 Query: 439 GRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 G +AS S +G IWD + G + T + ++ V++SP+G Y L + D T LW Sbjct: 225 GSLIASGSYDGL-VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW 283 Query: 613 E 615 + Sbjct: 284 D 284
>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 46.6 bits (109), Expect = 7e-05 Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H +V +++ PNS + + LWSA +V R TG Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV----------------RLFTGH- 467 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLV 549 RG V +L + P+G+YLASA Q +WD++ G L +R +I+ + Sbjct: 468 ------RGP----VLSLAFSPNGKYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSL 516 Query: 550 RWSPSGDYFLTAKFDGTFHLWE-TNTWTSEPWSSSN 654 +SP +A D + +W+ NT+ S P S+ Sbjct: 517 TFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSS 552
>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4| Length = 395 Score = 46.6 bits (109), Expect = 7e-05 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTA 585 VS++C+ DG YLAS S +G IWD + G + T I I+ V++SP+G Y L + Sbjct: 235 VSSVCFNRDGAYLASGSYDG-IVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILAS 293 Query: 586 KFDGTFHLWE 615 + T LW+ Sbjct: 294 NLNNTLKLWD 303 Score = 35.8 bits (81), Expect = 0.12 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 15/165 (9%) Frame = +1 Query: 181 LTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS--YPGNVASVKSGVTSSSFGAFPR 354 + + H+K + I++ P+ M + I +W Y + + G+ S+ + + Sbjct: 102 IPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSK 161 Query: 355 --GSTGQWILVDVLRGSSTELVSAL----------CWKPDGRYLASASCNGQSFTIWDVS 498 S LV V SS V L C+ P G +AS S + ++ IW Sbjct: 162 LIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFD-ETIRIWCAR 220 Query: 499 EGLGT-PIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 G I +S V ++ G Y + +DG +W++ T T Sbjct: 221 NGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGT 265
>HIRA_DROME (O17468) HIRA protein homolog (dHIRA)| Length = 1047 Score = 45.8 bits (107), Expect = 1e-04 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 8/139 (5%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-SYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H +V + W PN + + + +W A ++P +VA++K G TG Sbjct: 128 HDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLK-------------GHTG- 173 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD-----VSEGLGTPIRR--G 528 LV + W P GR+LAS S + +S IW+ +S + P G Sbjct: 174 -------------LVKGVSWDPLGRFLASQS-DDRSIKIWNTMNWSLSHTITEPFEECGG 219 Query: 529 LSSISLVRWSPSGDYFLTA 585 + I + WSP G Y ++A Sbjct: 220 TTHILRLSWSPDGQYLVSA 238 Score = 43.9 bits (102), Expect = 4e-04 Identities = 49/230 (21%), Positives = 82/230 (35%), Gaps = 26/230 (11%) Frame = +1 Query: 46 PKLLEEFDTKKVSWNPHKHCLAFVSGKD-----QVTVHDFE---------DSDGKESCSL 183 P + D + S + HK C F +G +V + + D+D + Sbjct: 6 PAWVHHDDKQIFSVDIHKDCTKFATGGQGSDCGRVVIWNLLPVLSDKAEFDADVPKMLCQ 65 Query: 184 TSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGST 363 +H V + W N + + I +W S + S G F G Sbjct: 66 MDQHLACVNCVRWSQNGQNLASGSDDKLIMIWRKS-------------AGSSGVFGTGGM 112 Query: 364 GQ----WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVS---EGLGTPIR 522 + W LRG +++ L W P+ YLAS S + + IWD + T ++ Sbjct: 113 QKNHESWKCFYTLRGHDGDVLD-LAWSPNDVYLASCSIDN-TVIIWDAQAFPHSVAT-LK 169 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT-----SEPWSSSNG 657 + V W P G + + D + +W T W+ +EP+ G Sbjct: 170 GHTGLVKGVSWDPLGRFLASQSDDRSIKIWNTMNWSLSHTITEPFEECGG 219
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC 2.7.11.1)| Length = 742 Score = 45.4 bits (106), Expect = 2e-04 Identities = 50/185 (27%), Positives = 74/185 (40%), Gaps = 16/185 (8%) Frame = +1 Query: 118 SGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGG-ICLWSAS-- 288 SG T + + G E L H V A+ + P+ G M+A G + G I LW + Sbjct: 560 SGSRDGTARLWNVATGTEHAVLKG-HTDYVYAVAFSPD-GSMVASGSRDGTIRLWDVATG 617 Query: 289 -----YPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSS-------TELVSALCWK 432 +V S S GS L DV G + T+ V A+ + Sbjct: 618 KERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFS 677 Query: 433 PDGRYLASASCNGQSFTIWDVS-EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHL 609 PDG LAS S + ++ +WDV+ + T + + V + P G +A DGT + Sbjct: 678 PDGALLASGS-DDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRI 736 Query: 610 WETNT 624 W T Sbjct: 737 WPIAT 741 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFL 579 T V + + PDG +AS S +G + +W+V+ G + +G + + V +SP G Sbjct: 543 THYVLDIAFSPDGSMVASGSRDGTA-RLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVA 601 Query: 580 TAKFDGTFHLWETNT 624 + DGT LW+ T Sbjct: 602 SGSRDGTIRLWDVAT 616 Score = 40.0 bits (92), Expect = 0.006 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISL-VRWSPSGDYFL 579 T+ V A+ + PDG LAS S + + +WDV+ + G + L + +SP G Sbjct: 501 TDWVRAVAFSPDGALLASGS-DDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVA 559 Query: 580 TAKFDGTFHLWETNTWT 630 + DGT LW T T Sbjct: 560 SGSRDGTARLWNVATGT 576 Score = 29.6 bits (65), Expect = 8.7 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 15/155 (9%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 V+++P +A SG T+ ++ + GKE L + + V ++ + P+ G M+ G Sbjct: 591 VAFSPDGSMVA--SGSRDGTIRLWDVATGKERDVLQAPAENVV-SLAFSPD-GSMLVHGS 646 Query: 259 KGGICLWSAS-------YPGNVASVKSGVTSSSFGAFPRGSTGQWI-LVDVLRGSS---- 402 + LW + + G+ V++ S GS + I L DV Sbjct: 647 DSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTL 706 Query: 403 ---TELVSALCWKPDGRYLASASCNGQSFTIWDVS 498 TE V ++ + P+G LASAS +G + IW ++ Sbjct: 707 EGHTEPVHSVAFHPEGTTLASASEDG-TIRIWPIA 740
>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) Length = 527 Score = 45.1 bits (105), Expect = 2e-04 Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H+ EV W P S + + +W+ + N G + Q Sbjct: 181 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN------------------GGSTQL 222 Query: 373 ILVDVLRGSSTEL-----VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +L +R ++ V++L W DG LA+ S +G + IW L + + + Sbjct: 223 VLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFA-RIWTEDGNLASTLGQHKGP 281 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 I ++W+ G+Y L+A D T +W+ +T Sbjct: 282 IFALKWNKKGNYILSAGVDKTTIIWDAHT 310 Score = 40.0 bits (92), Expect = 0.006 Identities = 48/194 (24%), Positives = 65/194 (33%), Gaps = 16/194 (8%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSG---------KDQVTVHDFEDSDGKESCSLTSEHQKEVKAIE 219 + + W+P LA S K VHD + H KE+ I+ Sbjct: 364 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ------------AHSKEIYTIK 411 Query: 220 WRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRG- 396 W P I L SAS+ V L DV RG Sbjct: 412 WSPTGPA--TSNPNSNIMLASASFDSTVR-----------------------LWDVERGV 446 Query: 397 ------SSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWS 558 E V ++ + PDG+YLAS S + + IW+ G RG I V W+ Sbjct: 447 CIHTLTKHQEPVYSVAFSPDGKYLASGSFD-KCVHIWNTQSGSLVHSYRGTGGIFEVCWN 505 Query: 559 PSGDYFLTAKFDGT 600 GD + DG+ Sbjct: 506 ARGDKVGASASDGS 519 Score = 38.9 bits (89), Expect = 0.014 Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 26/172 (15%) Frame = +1 Query: 178 SLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------SYPGNVASVKSGVTSSS 336 S +H+ + A++W +++ G +W A +P + A V + Sbjct: 273 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQN 331 Query: 337 FGAFPRGSTGQWI---------LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIW 489 F ST I V +G + E V+A+ W P G LAS S + + IW Sbjct: 332 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE-VNAIKWDPSGMLLASCS-DDMTLKIW 389 Query: 490 DVSEGLGT-PIRRGLSSISLVRWSPSGD---------YFLTAKFDGTFHLWE 615 + + ++ I ++WSP+G +A FD T LW+ Sbjct: 390 SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD 441 Score = 38.5 bits (88), Expect = 0.019 Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 10/154 (6%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H EV AI+W P+ M+ C + L + S+K Q Sbjct: 361 HTNEVNAIKWDPSG--MLLASCSDDMTL-------KIWSMK-----------------QD 394 Query: 373 ILVDVLRGSSTELVSALCWKPDGR---------YLASASCNGQSFTIWDVSEGLGT-PIR 522 V L+ S E+ + + W P G LASAS + + +WDV G+ + Sbjct: 395 ACVHDLQAHSKEIYT-IKWSPTGPATSNPNSNIMLASASFDS-TVRLWDVERGVCIHTLT 452 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 + + V +SP G Y + FD H+W T + Sbjct: 453 KHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 486
>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 45.1 bits (105), Expect = 2e-04 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 2/157 (1%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H +V +++ PNS + + LWSA +V R TG Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV----------------RLFTGH- 467 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLV 549 RG V +L + P+G+YLASA Q +WD++ G L +R SI+ + Sbjct: 468 ------RGP----VLSLSFSPNGKYLASAG-EDQRLKLWDLASGTLFKELRGHTDSITSL 516 Query: 550 RWSPSGDYFLTAKFDGTFHLWE-TNTWTSEPWSSSNG 657 +SP +A D + +W+ +T + P S+G Sbjct: 517 AFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSG 553
>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 85 kDa subunit) (p85) (TAFII-80) Length = 704 Score = 44.7 bits (104), Expect = 3e-04 Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 2/162 (1%) Frame = +1 Query: 157 SDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSS 336 +D ++ + H +V +++ PNS + + LW Sbjct: 521 TDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD------------------ 562 Query: 337 FGAFPRGSTGQWI-LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LG 510 TGQ + L+ +GS + L + C GRYLAS S + + IWD+S G L Sbjct: 563 ------NMTGQSVRLMTGHKGSVSSLAFSAC----GRYLASGSVD-HNIIIWDLSNGSLV 611 Query: 511 TPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 T + R S+++ + +S G A D LW+ + T + Sbjct: 612 TTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTED 653 Score = 30.8 bits (68), Expect = 3.9 Identities = 21/84 (25%), Positives = 33/84 (39%) Frame = +1 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVR 552 +L+ S+ L S L W Y G + +WDV R Sbjct: 464 LLLSCSEDSTIRLWSLLTWSCVVTY------RGHVYPVWDV------------------R 499 Query: 553 WSPSGDYFLTAKFDGTFHLWETNT 624 ++P G YF++ +D T LW T++ Sbjct: 500 FAPHGYYFVSCSYDKTARLWATDS 523
>HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1017 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 6/170 (3%) Frame = +1 Query: 145 DFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGG-ICLWS-ASYPGNVASVKS 318 D +D + + H V + W NSG +A G I +W A+Y G Sbjct: 53 DEKDENIPKMLCQMDNHLACVNCVRWS-NSGMYLASGGDDKLIMVWKRATYIG------- 104 Query: 319 GVTSSSFGAFPR-GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 S+ FG+ + + QW V +LR S +++ + W P +LAS S + + IW+ Sbjct: 105 --PSTVFGSSGKLANVEQWRCVSILRNHSGDVMD-VAWSPHDAWLASCSVDN-TVVIWNA 160 Query: 496 ---SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 E L T +R + + W P G Y + D + +W T W E Sbjct: 161 VKFPEILAT-LRGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLE 209 Score = 40.8 bits (94), Expect = 0.004 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 7/143 (4%) Frame = +1 Query: 178 SLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRG 357 S+ H +V + W P+ + + + +W+A VK FP Sbjct: 125 SILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNA--------VK----------FPE- 165 Query: 358 STGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRR--- 525 ++ LRG S LV L W P G+Y+AS + + +S +W + L T I + Sbjct: 166 ------ILATLRGHSG-LVKGLTWDPVGKYIASQA-DDRSLKVWRTLDWQLETSITKPFD 217 Query: 526 ---GLSSISLVRWSPSGDYFLTA 585 G + + + WSP G Y ++A Sbjct: 218 ECGGTTHVLRLSWSPDGHYLVSA 240
>HIRA_MOUSE (Q61666) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1015 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 6/170 (3%) Frame = +1 Query: 145 DFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGG-ICLWS-ASYPGNVASVKS 318 D +D + + H V + W NSG +A G I +W A+Y G Sbjct: 53 DEKDENIPKMLCQMDNHLACVNCVRWS-NSGMYLASGGDDKLIMVWKRATYIG------- 104 Query: 319 GVTSSSFGAFPR-GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 S+ FG+ + + QW V +LR S +++ + W P +LAS S + + IW+ Sbjct: 105 --PSTVFGSSGKLANVEQWRCVSILRSHSGDVMD-VAWSPHDAWLASCSVDN-TVVIWNA 160 Query: 496 ---SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 E L T +R + + W P G Y + D + +W T W E Sbjct: 161 VKFPEILAT-LRGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLE 209 Score = 40.8 bits (94), Expect = 0.004 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 7/143 (4%) Frame = +1 Query: 178 SLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRG 357 S+ H +V + W P+ + + + +W+A VK FP Sbjct: 125 SILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNA--------VK----------FPE- 165 Query: 358 STGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRR--- 525 ++ LRG S LV L W P G+Y+AS + + +S +W + L T I + Sbjct: 166 ------ILATLRGHSG-LVKGLTWDPVGKYIASQA-DDRSLKVWRTLDWQLETSITKPCD 217 Query: 526 ---GLSSISLVRWSPSGDYFLTA 585 G + + + WSP G Y ++A Sbjct: 218 ECGGTTHVLRLSWSPDGHYLVSA 240
>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like| 1Y protein) (Transducin-beta-like 1, Y-linked) Length = 522 Score = 44.3 bits (103), Expect = 3e-04 Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H+ EV W P S + + +W+ + N G + Q Sbjct: 178 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN------------------GGSTQL 219 Query: 373 ILVDVLRGSSTEL-----VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +L +R ++ V++L W DG LA S +G + IW + L + + + Sbjct: 220 VLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFA-RIWTENGNLASTLGQHKGP 278 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 I ++W+ G+Y L+A D T +W+ +T Sbjct: 279 IFALKWNKKGNYVLSAGVDKTTIIWDAHT 307 Score = 41.2 bits (95), Expect = 0.003 Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 10/154 (6%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H EV AI+W P+ M+ C + L + S+K Q Sbjct: 358 HTNEVNAIKWDPSG--MLLASCSDDMTL-------KIWSMK-----------------QD 391 Query: 373 ILVDVLRGSSTELVSALCWKPDGR---------YLASASCNGQSFTIWDVSEGLGT-PIR 522 V L+ S E+ + + W P G LASAS + + +WDV +G+ T + Sbjct: 392 ACVHDLQAHSKEIYT-IKWSPTGPATSNPNSSIMLASASFDS-TVRLWDVEQGVCTHTLM 449 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 + + V +SP G Y + FD H+W T + Sbjct: 450 KHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQS 483 Score = 39.3 bits (90), Expect = 0.011 Identities = 45/189 (23%), Positives = 66/189 (34%), Gaps = 11/189 (5%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSG---------KDQVTVHDFEDSDGKESCSLTSEHQKEVKAIE 219 + + W+P LA S K VHD + H KE+ I+ Sbjct: 361 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ------------AHSKEIYTIK 408 Query: 220 WRPNSGKMIAVGCKGGICLWSASYPGNVA--SVKSGVTSSSFGAFPRGSTGQWILVDVLR 393 W P I L SAS+ V V+ GV + + Sbjct: 409 WSPTGPA--TSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLM----------------- 449 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDY 573 E V ++ + PDG+YLAS S + + IW+ G +G I V W+ GD Sbjct: 450 -KHQEPVYSVAFSPDGKYLASGSFD-KYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDK 507 Query: 574 FLTAKFDGT 600 + DG+ Sbjct: 508 VGASASDGS 516 Score = 38.9 bits (89), Expect = 0.014 Identities = 45/209 (21%), Positives = 76/209 (36%), Gaps = 26/209 (12%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D + WN LA S + ++ S +H+ + A++W ++ Sbjct: 237 DVTSLDWNSDGTLLAMGSYDGFARIW----TENGNLASTLGQHKGPIFALKWNKKGNYVL 292 Query: 247 AVGCKGGICLWSA-------SYPGNVASVKSGVTSSSFGAFPRGSTGQWI---------L 378 + G +W A +P + A V + F ST I Sbjct: 293 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNMTFASCSTDMCIHVCRLGCDHP 351 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGT-PIRRGLSSISLVRW 555 V +G + E V+A+ W P G LAS S + + IW + + ++ I ++W Sbjct: 352 VKTFQGHTNE-VNAIKWDPSGMLLASCS-DDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 409 Query: 556 SPSGD---------YFLTAKFDGTFHLWE 615 SP+G +A FD T LW+ Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWD 438
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVS-------EGLGTPIRRGLSSISLVRWSPSG 567 LV + W PDG+ L +AS +G + +WD+S EG G +R +SP G Sbjct: 1590 LVGTVDWSPDGQMLVTASNDGTA-RLWDLSGRELLTLEGHGNWVRSA-------EFSPDG 1641 Query: 568 DYFLTAKFDGTFHLWETNT 624 + LT+ DGT LW T Sbjct: 1642 RWVLTSSADGTAKLWPVKT 1660 Score = 42.7 bits (99), Expect = 0.001 Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 16/166 (9%) Frame = +1 Query: 163 GKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSG----VTS 330 G+E +L H+ V+++ + P+ ++ G +W+ + G ++ G V + Sbjct: 1086 GEEVATLRG-HEDWVRSVHFSPHHQFLVTSGQDNTARIWN--FAGEQLTLCQGHADWVRN 1142 Query: 331 SSFGAFPR--------GSTGQWIL----VDVLRGSSTELVSALCWKPDGRYLASASCNGQ 474 + F + G+ W L + + +G ++ + +A + PDG+++ + S +G Sbjct: 1143 AEFNCHGQILLTASRDGTARLWDLEGREIGLCQGHTSWVRNAQ-FSPDGQWIVTCSADGT 1201 Query: 475 SFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 + +WD+S ++ + ++ WSP G + +T+ DGT +W Sbjct: 1202 A-RLWDLSSQCFAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVW 1246 Score = 41.6 bits (96), Expect = 0.002 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 14/156 (8%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSA---------SYPGNVASVKSGVTSSSFGA 345 HQ V W P+ +I G +WS + N+ + + Sbjct: 1218 HQNWVNNALWSPDGQHIITSSSDGTARVWSRHGKCLGTLRGHDHNIHGARFSLDGQKIVT 1277 Query: 346 FPRGSTGQ-WI----LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLG 510 + +T + W L+ +LRG E+ A + DGR++ + S + Q+ WD+S+ Sbjct: 1278 YSTDNTARLWTKEGTLLTILRGHQKEVYDA-DFSADGRFVFTVSAD-QTARQWDISQKDT 1335 Query: 511 TPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 + + ++P GD LT D T LW T Sbjct: 1336 ITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTT 1371 Score = 41.2 bits (95), Expect = 0.003 Identities = 27/98 (27%), Positives = 46/98 (46%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRW 555 L++VLRG E ++AL W DG+Y A+AS + + +W +R + V + Sbjct: 1047 LINVLRGHQ-EAITALDWSADGQYFATASAD-HTVKLWQRHGEEVATLRGHEDWVRSVHF 1104 Query: 556 SPSGDYFLTAKFDGTFHLWETNTWTSEPWSSSNGICNW 669 SP + +T+ D T +W + E + G +W Sbjct: 1105 SPHHQFLVTSGQDNTARIW---NFAGEQLTLCQGHADW 1139 Score = 38.9 bits (89), Expect = 0.014 Identities = 19/62 (30%), Positives = 35/62 (56%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFH 606 + PDG+++ + S + ++ +W+V T +R ++ VR+SP Y +TA DGT Sbjct: 1391 FSPDGQWIVTGSAD-KTAQLWNVLGKKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTAR 1449 Query: 607 LW 612 +W Sbjct: 1450 VW 1451 Score = 37.4 bits (85), Expect = 0.041 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFH 606 + P+G +A+ S + + +WD S + + V WSP G +TA DGT Sbjct: 1555 FSPEGNLIATVSAD-HTARLWDRSGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTAR 1613 Query: 607 LWE 615 LW+ Sbjct: 1614 LWD 1616 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 454 SASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 +A+ NG ++ +W L +R +I+ + WS G YF TA D T LW+ Sbjct: 1031 TATTNGIAY-LWSFHGELINVLRGHQEAITALDWSADGQYFATASADHTVKLWQ 1083 Score = 34.7 bits (78), Expect = 0.27 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS---------YPGNVASVKSGVTSSSF-G 342 HQ V + + P+S ++ G +W+ + Y N+ + + Sbjct: 1423 HQDAVLNVRFSPDSQYIVTASKDGTARVWNNTGRELAVLRHYEKNIFAAEFSADGQFIVT 1482 Query: 343 AFPRGSTGQWILVD----VLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLG 510 A + G W +V + RG + A + D RY+ +AS + + IWD LG Sbjct: 1483 ASDDNTAGIWEIVGREVGICRGHEGPVYFAQ-FSADSRYILTASVDNTA-RIWDF---LG 1537 Query: 511 TPIRRGLSSISLV---RWSPSGDYFLTAKFDGTFHLWE 615 P+ S+V R+SP G+ T D T LW+ Sbjct: 1538 RPLLTLAGHQSIVYQARFSPEGNLIATVSADHTARLWD 1575 Score = 34.3 bits (77), Expect = 0.35 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = +1 Query: 439 GRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWE 615 G+ L +AS +G + +WD+ EG + +G +S + ++SP G + +T DGT LW+ Sbjct: 1149 GQILLTASRDGTA-RLWDL-EGREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWD 1206 Query: 616 TNTWTSEPWSSSNGICNW 669 +S+ ++ G NW Sbjct: 1207 L---SSQCFAVLKGHQNW 1221
>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) (Transducin-beta-like 1, X-linked) (SMAP55) Length = 526 Score = 43.9 bits (102), Expect = 4e-04 Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 15/194 (7%) Frame = +1 Query: 88 NPHKHCLAFVSGKDQ----VTVH------DFEDSDGKESCSLTSEHQKEVKAIEWRPNSG 237 NP K+ A V+G++ V H D E ++ H+ EV W P S Sbjct: 135 NPSKNREATVNGEENRAHSVNNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPVSD 194 Query: 238 KMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTEL-- 411 + + +W+ + N G + Q +L +R ++ Sbjct: 195 LLASGSGDSTARIWNLNENSN------------------GGSTQLVLRHCIREGGHDVPS 236 Query: 412 ---VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLT 582 V++L W +G LA+ S +G + IW L + + + I ++W+ G+Y L+ Sbjct: 237 NKDVTSLDWNTNGTLLATGSYDGFA-RIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS 295 Query: 583 AKFDGTFHLWETNT 624 A D T +W+ +T Sbjct: 296 AGVDKTTIIWDAHT 309 Score = 42.7 bits (99), Expect = 0.001 Identities = 48/194 (24%), Positives = 68/194 (35%), Gaps = 16/194 (8%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSG---------KDQVTVHDFEDSDGKESCSLTSEHQKEVKAIE 219 + + W+P LA S K +V +HD + H KE+ I+ Sbjct: 363 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQ------------AHNKEIYTIK 410 Query: 220 WRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGS 399 W P I L SAS+ V L D+ RG Sbjct: 411 WSPTGPA--TSNPNSNIMLASASFDSTVR-----------------------LWDIERGV 445 Query: 400 ST-------ELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWS 558 T E V ++ + PDG+YLAS S + + IW+ G RG I V W+ Sbjct: 446 CTHTLTKHQEPVYSVAFSPDGKYLASGSFD-KCVHIWNTQSGNLVHSYRGTGGIFEVCWN 504 Query: 559 PSGDYFLTAKFDGT 600 GD + DG+ Sbjct: 505 ARGDKVGASASDGS 518 Score = 40.8 bits (94), Expect = 0.004 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 10/154 (6%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H EV AI+W P+ M+ C + L + S+K Q Sbjct: 360 HTNEVNAIKWDPSG--MLLASCSDDMTL-------KIWSMK-----------------QE 393 Query: 373 ILVDVLRGSSTELVSALCWKPDGR---------YLASASCNGQSFTIWDVSEGLGT-PIR 522 + + L+ + E+ + + W P G LASAS + + +WD+ G+ T + Sbjct: 394 VCIHDLQAHNKEIYT-IKWSPTGPATSNPNSNIMLASASFDS-TVRLWDIERGVCTHTLT 451 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 + + V +SP G Y + FD H+W T + Sbjct: 452 KHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 485
>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog| Length = 694 Score = 43.9 bits (102), Expect = 4e-04 Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 17/167 (10%) Frame = +1 Query: 166 KESCSLT-SEHQKEVKAIEWRPNSGKMIAVGCKGGICLW---SASYPGNVASVKSGVTSS 333 K +C ++ + H V I++ + +++A G + LW +A + K+ ++S Sbjct: 52 KPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSL 111 Query: 334 SFGAFPR----GSTGQWI-LVDVLRGSS-------TELVSALCWKPDGRYLASASCNGQS 477 F GS I L DV R T+ V L + PDG++LASAS + + Sbjct: 112 DFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASAS-DDST 170 Query: 478 FTIWDVSEG-LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 +WD+ G + T S++++V++ P+ + D T LW+ Sbjct: 171 VKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD 217
>TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL1XR1-A| (Transducin beta-like 1X-related protein 1-A) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-A) (TBL1-related protein 1-A) (xTBLR1) Length = 519 Score = 43.5 bits (101), Expect = 6e-04 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICL-------------------------WSASYPG 297 H EV AI+W P +G ++A C + L WS + PG Sbjct: 353 HTNEVNAIKWDP-TGNLLA-SCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPTGPG 410 Query: 298 -NVASVKSGVTSSSFGAFPRGSTGQWILVDVLRG-------SSTELVSALCWKPDGRYLA 453 N + + S+SF + R L DV RG E V ++ + PDGRYLA Sbjct: 411 TNNPNANLMLASASFDSTVR-------LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 463 Query: 454 SASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 S S + + IW+ G RG I V W+ +GD + DG+ Sbjct: 464 SGSFD-KCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGS 511 Score = 40.8 bits (94), Expect = 0.004 Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 26/211 (12%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D + WN LA S + DG + +L +H+ + A++W ++ Sbjct: 232 DVTSLDWNSEGTLLATGSYDGFARIWT---KDGNLASTL-GQHKGPIFALKWNKKGNFIL 287 Query: 247 AVGCKGGICLWSA-------SYPGNVASVKSGVTSSSFGAFPRGST---------GQWIL 378 + G +W A +P + A V S F ST GQ Sbjct: 288 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTFASCSTDMCIHVCKLGQDRP 346 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGT-PIRRGLSSISLVRW 555 + +G + E V+A+ W P G LAS S + + IW + ++ I ++W Sbjct: 347 IKTFQGHTNE-VNAIKWDPTGNLLASCS-DDMTLKIWSMKHDTCVHDLQAHNKEIYTIKW 404 Query: 556 SPSGD---------YFLTAKFDGTFHLWETN 621 SP+G +A FD T LW+ + Sbjct: 405 SPTGPGTNNPNANLMLASASFDSTVRLWDVD 435 Score = 40.8 bits (94), Expect = 0.004 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 5/149 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H+ EV W P S + + +W+ S S+S GST Q Sbjct: 173 HESEVFICAWNPVSDLLASGSGDSTARIWNLSE-----------NSTS------GST-QL 214 Query: 373 ILVDVLRGSSTEL-----VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +L +R ++ V++L W +G LA+ S +G + IW L + + + Sbjct: 215 VLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFA-RIWTKDGNLASTLGQHKGP 273 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 I ++W+ G++ L+A D T +W+ +T Sbjct: 274 IFALKWNKKGNFILSAGVDKTTIIWDAHT 302
>TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL1XR1-B| (Transducin beta-like 1X-related homolog 1-B) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-B) (TBL1-related protein 1-B) Length = 522 Score = 43.5 bits (101), Expect = 6e-04 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICL-------------------------WSASYPG 297 H EV AI+W P +G ++A C + L WS + PG Sbjct: 356 HTNEVNAIKWDP-TGNLLA-SCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPTGPG 413 Query: 298 -NVASVKSGVTSSSFGAFPRGSTGQWILVDVLRG-------SSTELVSALCWKPDGRYLA 453 N + + S+SF + R L DV RG E V ++ + PDGRYLA Sbjct: 414 TNNPNANLMLASASFDSTVR-------LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 466 Query: 454 SASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 S S + + IW+ G RG I V W+ +GD + DG+ Sbjct: 467 SGSFD-KCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGS 514 Score = 40.8 bits (94), Expect = 0.004 Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 26/211 (12%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D + WN LA S + DG + +L +H+ + A++W ++ Sbjct: 235 DVTSLDWNSEGTLLATGSYDGFARIWT---KDGNLASTL-GQHKGPIFALKWNKKGNFIL 290 Query: 247 AVGCKGGICLWSA-------SYPGNVASVKSGVTSSSFGAFPRGST---------GQWIL 378 + G +W A +P + A V S F ST GQ Sbjct: 291 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTFASCSTDMCIHVCKLGQDRP 349 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGT-PIRRGLSSISLVRW 555 + +G + E V+A+ W P G LAS S + + IW + ++ I ++W Sbjct: 350 IKTFQGHTNE-VNAIKWDPTGNLLASCS-DDMTLKIWSMKHDTCVHDLQAHNKEIYTIKW 407 Query: 556 SPSGD---------YFLTAKFDGTFHLWETN 621 SP+G +A FD T LW+ + Sbjct: 408 SPTGPGTNNPNANLMLASASFDSTVRLWDVD 438 Score = 40.8 bits (94), Expect = 0.004 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 5/149 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H+ EV W P S + + +W+ S S+S GST Q Sbjct: 176 HESEVFICAWNPVSDLLASGSGDSTARIWNLSE-----------NSTS------GST-QL 217 Query: 373 ILVDVLRGSSTEL-----VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +L +R ++ V++L W +G LA+ S +G + IW L + + + Sbjct: 218 VLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFA-RIWTKDGNLASTLGQHKGP 276 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 I ++W+ G++ L+A D T +W+ +T Sbjct: 277 IFALKWNKKGNFILSAGVDKTTIIWDAHT 305
>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 43.5 bits (101), Expect = 6e-04 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICL-------------------------WSASYPG 297 H EV AI+W P +G ++A C + L WS + PG Sbjct: 348 HTNEVNAIKWDP-TGNLLA-SCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405 Query: 298 -NVASVKSGVTSSSFGAFPRGSTGQWILVDVLRG-------SSTELVSALCWKPDGRYLA 453 N + + S+SF + R L DV RG E V ++ + PDGRYLA Sbjct: 406 TNNPNANLMLASASFDSTVR-------LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458 Query: 454 SASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 S S + + IW+ G RG I V W+ +GD + DG+ Sbjct: 459 SGSFD-KCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGS 506 Score = 41.2 bits (95), Expect = 0.003 Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 26/211 (12%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D + WN LA S + DG + +L +H+ + A++W ++ Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWT---KDGNLASTL-GQHKGPIFALKWNKKGNFIL 282 Query: 247 AVGCKGGICLWSA-------SYPGNVASVKSGVTSSSFGAFPRGST---------GQWIL 378 + G +W A +P + A V S F ST GQ Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTFASCSTDMCIHVCKLGQDRP 341 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRW 555 + +G + E V+A+ W P G LAS S + + IW + + ++ I ++W Sbjct: 342 IKTFQGHTNE-VNAIKWDPTGNLLASCS-DDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399 Query: 556 SPSGD---------YFLTAKFDGTFHLWETN 621 SP+G +A FD T LW+ + Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVD 430 Score = 40.4 bits (93), Expect = 0.005 Identities = 21/75 (28%), Positives = 40/75 (53%) Frame = +1 Query: 400 STELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFL 579 S + V++L W +G LA+ S +G + IW L + + + I ++W+ G++ L Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFA-RIWTKDGNLASTLGQHKGPIFALKWNKKGNFIL 282 Query: 580 TAKFDGTFHLWETNT 624 +A D T +W+ +T Sbjct: 283 SAGVDKTTIIWDAHT 297
>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 43.5 bits (101), Expect = 6e-04 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICL-------------------------WSASYPG 297 H EV AI+W P +G ++A C + L WS + PG Sbjct: 348 HTNEVNAIKWDP-TGNLLA-SCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405 Query: 298 -NVASVKSGVTSSSFGAFPRGSTGQWILVDVLRG-------SSTELVSALCWKPDGRYLA 453 N + + S+SF + R L DV RG E V ++ + PDGRYLA Sbjct: 406 TNNPNANLMLASASFDSTVR-------LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458 Query: 454 SASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 S S + + IW+ G RG I V W+ +GD + DG+ Sbjct: 459 SGSFD-KCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGS 506 Score = 41.2 bits (95), Expect = 0.003 Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 26/211 (12%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D + WN LA S + DG + +L +H+ + A++W ++ Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWT---KDGNLASTL-GQHKGPIFALKWNKKGNFIL 282 Query: 247 AVGCKGGICLWSA-------SYPGNVASVKSGVTSSSFGAFPRGST---------GQWIL 378 + G +W A +P + A V S F ST GQ Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTFASCSTDMCIHVCKLGQDRP 341 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRW 555 + +G + E V+A+ W P G LAS S + + IW + + ++ I ++W Sbjct: 342 IKTFQGHTNE-VNAIKWDPTGNLLASCS-DDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399 Query: 556 SPSGD---------YFLTAKFDGTFHLWETN 621 SP+G +A FD T LW+ + Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVD 430 Score = 40.8 bits (94), Expect = 0.004 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 5/149 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H+ EV W P S + + +W+ S S+S GST Q Sbjct: 168 HESEVFICAWNPVSDLLASGSGDSTARIWNLSE-----------NSTS------GST-QL 209 Query: 373 ILVDVLRGSSTEL-----VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +L +R ++ V++L W +G LA+ S +G + IW L + + + Sbjct: 210 VLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFA-RIWTKDGNLASTLGQHKGP 268 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 I ++W+ G++ L+A D T +W+ +T Sbjct: 269 IFALKWNKKGNFILSAGVDKTTIIWDAHT 297
>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12| Length = 586 Score = 43.1 bits (100), Expect = 8e-04 Identities = 39/181 (21%), Positives = 76/181 (41%) Frame = +1 Query: 73 KKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAV 252 + V+++P LA Q+ + D K L + H++E+ ++++ + +++ Sbjct: 338 RSVAFSPDGKYLATGVEDQQIRIWDIAQ---KRVYRLLTGHEQEIYSLDFSKDGKTLVSG 394 Query: 253 GCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWK 432 +CLW V++G Q +++ G +T + S Sbjct: 395 SGDRTVCLWD---------VEAGE--------------QKLILHTDDGVTTVMFS----- 426 Query: 433 PDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 PDG+++A+ S + + IW S L + S+ V +SP G Y ++ D T LW Sbjct: 427 PDGQFIAAGSLD-KVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 485 Query: 613 E 615 E Sbjct: 486 E 486 Score = 34.3 bits (77), Expect = 0.35 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = +1 Query: 385 VLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPS 564 +L G E+ S L + DG+ L S S ++ +WDV G I ++ V +SP Sbjct: 371 LLTGHEQEIYS-LDFSKDGKTLVSGS-GDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPD 428 Query: 565 GDYFLTAKFDGTFHLWETN 621 G + D +W ++ Sbjct: 429 GQFIAAGSLDKVIRIWTSS 447
>WDR1_DROME (Q9VU68) Putative actin-interacting protein 1 (AIP1)| Length = 608 Score = 43.1 bits (100), Expect = 8e-04 Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 22/158 (13%) Frame = +1 Query: 205 VKAIEWRPNSGKMIAVGC---KGGICLWS--ASYPGNVASVKSGVTSSSFGA-----FPR 354 +K I W P++ +++AVG + G S + G ++ + S+ F Sbjct: 111 IKDISWSPDNQRIVAVGEGRERFGHVFMSETGTSVGEISGQSKSINSADFRPARPFRIVT 170 Query: 355 GSTGQWILV--------DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGL- 507 GS I V + + + V A+ + PDG++ ASA +G+ F S L Sbjct: 171 GSEDNTIAVFEGPPFKFKMTKQDHSRFVQAVRYSPDGKFFASAGFDGKVFLYDGTSSELV 230 Query: 508 ---GTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 G+P +G + + W P LT D T LW Sbjct: 231 GEFGSPAHKG--GVYALAWKPDSTQLLTCSGDKTCRLW 266
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 43.1 bits (100), Expect = 8e-04 Identities = 23/75 (30%), Positives = 40/75 (53%) Frame = +1 Query: 400 STELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFL 579 S + V++L W DG LA+ S +G + IW L + + + I ++W+ G+Y L Sbjct: 409 SNKDVTSLDWNCDGSLLATGSYDGYA-RIWKTDGRLASTLGQHKGPIFALKWNKCGNYIL 467 Query: 580 TAKFDGTFHLWETNT 624 +A D T +W+ +T Sbjct: 468 SAGVDKTTIIWDAST 482 Score = 39.3 bits (90), Expect = 0.011 Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 8/186 (4%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 + + W P LA S D +T+ + + + C H KE+ I+W P Sbjct: 536 EVNAIKWCPQGQLLASCS--DDMTLKIWSMNRDR-CCHDLQAHSKEIYTIKWSPTG---- 588 Query: 247 AVGCKGGICLWSASYPG-NVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGS-------S 402 PG N + + S+SF + R L DV RGS Sbjct: 589 ---------------PGTNNPNTNLILASASFDSTVR-------LWDVERGSCIHTLTKH 626 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLT 582 TE V ++ + PDG++LAS S + + IW G +G I V W+ G Sbjct: 627 TEPVYSVAFSPDGKHLASGSFD-KCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGA 685 Query: 583 AKFDGT 600 + DG+ Sbjct: 686 SASDGS 691 Score = 34.3 bits (77), Expect = 0.35 Identities = 46/212 (21%), Positives = 77/212 (36%), Gaps = 32/212 (15%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEH-----------QKEVKAIEWRP 228 +WNP + LA SG + D D++ S L H K+V +++W Sbjct: 362 AWNPSRDLLASGSGDSTARIWDMSDAN-TNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNC 420 Query: 229 NSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV-------- 381 + G ++A G G +W G +AS G A G +IL Sbjct: 421 D-GSLLATGSYDGYARIWKTD--GRLASTL-GQHKGPIFALKWNKCGNYILSAGVDKTTI 476 Query: 382 --DVLRGSSTELVSA-------LCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRR--- 525 D G T+ + + W+ + + ASC+ I G+ PI+ Sbjct: 477 IWDASTGQCTQQFAFHSAPALDVDWQTNQAF---ASCSTDQ-RIHVCRLGVNEPIKTFKG 532 Query: 526 GLSSISLVRWSPSGDYFLTAKFDGTFHLWETN 621 + ++ ++W P G + D T +W N Sbjct: 533 HTNEVNAIKWCPQGQLLASCSDDMTLKIWSMN 564 Score = 33.9 bits (76), Expect = 0.46 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Frame = +1 Query: 388 LRGSSTELVSALCWKPDGR---------YLASASCNGQSFTIWDVSEGLGT-PIRRGLSS 537 L+ S E+ + + W P G LASAS + + +WDV G + + Sbjct: 572 LQAHSKEIYT-IKWSPTGPGTNNPNTNLILASASFDS-TVRLWDVERGSCIHTLTKHTEP 629 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 + V +SP G + + FD H+W T T Sbjct: 630 VYSVAFSPDGKHLASGSFDKCVHIWSTQT 658
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2| Length = 501 Score = 42.7 bits (99), Expect = 0.001 Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 3/181 (1%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVGC 258 SW+ + +A S D TV F+ G +C T H V + P S + + G Sbjct: 262 SWSSNSQFIA--SASDDTTVKIFDVISG--ACLRTMRGHTNYVFCCSFNPQSSLIASAGF 317 Query: 259 KGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPD 438 + +W K+G+ A ++ ++++ + D Sbjct: 318 DETVRVWD---------FKTGLCVKCIPAH------------------SDPITSISYNHD 350 Query: 439 GRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 G +A++S +G +WD + G L T + + ++ V +SP+G Y L+A+ D + LW Sbjct: 351 GNTMATSSYDG-CIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLW 409 Query: 613 E 615 + Sbjct: 410 D 410
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +1 Query: 406 ELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLT 582 +LV+ + + PDGRY+ SAS + S +WD +G RG ++S+ V WS ++ Sbjct: 403 KLVNHVAFSPDGRYIVSASFD-NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVS 461 Query: 583 AKFDGTFHLWETNT 624 D T +W+ T Sbjct: 462 CSKDTTLKVWDVRT 475 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = +1 Query: 400 STELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYF 576 ST L SA R + A N + IWD +G + + V WSP G+ Sbjct: 144 STILCSAFAPHTSSRMVTGAGDN--TARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVI 201 Query: 577 LTAKFDGTFHLWE 615 T D T LW+ Sbjct: 202 ATGSMDNTIRLWD 214
>EMAL2_HUMAN (O95834) Echinoderm microtubule-associated protein-like 2 (EMAP-2)| (HuEMAP-2) Length = 649 Score = 42.4 bits (98), Expect = 0.001 Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 19/167 (11%) Frame = +1 Query: 181 LTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGS 360 L H +E+ + P+ + + G + LWS+ + S + S G P GS Sbjct: 372 LVQGHVEELWGLATHPSRAQFVTCGQDKLVHLWSSDSHQPLWSRIIEDPARSAGFHPSGS 431 Query: 361 -------TGQWILVDV-------LRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVS 498 TG+W+L+D + E +S + + PDG YLA S + + ++ V Sbjct: 432 VLAVGTVTGRWLLLDTETHDLVAIHTDGNEQISVVSFSPDGAYLAVGSHDNLVY-VYTVD 490 Query: 499 EGLGTPIRRGLSS-----ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 +G R G S I+ + W+ F+T D W+ T Sbjct: 491 QGGRKVSRLGKCSGHSSFITHLDWAQDSSCFVTNSGDYEILYWDPAT 537
>HIRA_CHICK (P79987) HIRA protein (TUP1-like enhancer of split protein 1)| (CHIRA) Length = 1018 Score = 42.4 bits (98), Expect = 0.001 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 7/144 (4%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPR 354 CS+ H +V + W P+ + + + +W+A+ FP Sbjct: 123 CSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAAV-----------------KFPE 165 Query: 355 GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRR-- 525 ++ L+G S LV L W P G+Y+AS + +S +W +G L T I + Sbjct: 166 -------ILATLKGHS-GLVKGLTWDPVGKYIAS-QADDRSLKVWRTMDGQLETSITKPF 216 Query: 526 ----GLSSISLVRWSPSGDYFLTA 585 G + + + SP G Y ++A Sbjct: 217 DECGGTTHVLRLSGSPDGHYLVSA 240 Score = 34.7 bits (78), Expect = 0.27 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 5/147 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWS-ASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H V + W N + + G I +W A+Y G S+ FG+ + + + Sbjct: 69 HLACVNCVRWSNNGVYLASGGDDKLIMVWKRAAYIG---------PSTVFGSSSKLTNVE 119 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVS----EGLGTPIRRGLSS 537 +LR S +++ + W P +LAS S + + IW+ + E L T ++ Sbjct: 120 QWRCSILRSHSGDVMD-VAWSPHDAWLASCSVDN-TVVIWNAAVKFPEILAT-LKGHSGL 176 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWET 618 + + W P G Y + D + +W T Sbjct: 177 VKGLTWDPVGKYIASQADDRSLKVWRT 203
>HIRA_FUGRU (O42611) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1025 Score = 41.2 bits (95), Expect = 0.003 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 8/118 (6%) Frame = +1 Query: 328 SSSFGAFPR-GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSE- 501 S+ FG+ + + QW V +LR + +++ + W P +LAS S + + IW+ + Sbjct: 106 STVFGSSNKLANVEQWRCVTILRNHTGDVMD-VSWSPHDVWLASCSVDN-TIVIWNARKF 163 Query: 502 -GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE-----PWSSSNG 657 + T +R + + W P G Y + D + +W T W E P+S G Sbjct: 164 PEMVTCLRGHTGLVKGLTWDPVGKYIASQADDHSLRVWRTVDWQMEANITKPFSECGG 221 Score = 39.7 bits (91), Expect = 0.008 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 7/143 (4%) Frame = +1 Query: 178 SLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRG 357 ++ H +V + W P+ + + I +W+A FP Sbjct: 125 TILRNHTGDVMDVSWSPHDVWLASCSVDNTIVIWNAR------------------KFPE- 165 Query: 358 STGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIW-----DVSEGLGTPIR 522 +V LRG T LV L W P G+Y+AS + + S +W + + P Sbjct: 166 ------MVTCLRGH-TGLVKGLTWDPVGKYIASQA-DDHSLRVWRTVDWQMEANITKPFS 217 Query: 523 R--GLSSISLVRWSPSGDYFLTA 585 G + + + WSP G Y ++A Sbjct: 218 ECGGTTHVLRLSWSPDGQYLVSA 240
>PWP2_YEAST (P25635) Periodic tryptophan protein 2 (U3 small nucleolar| RNA-associated protein 1) (U3 snoRNA-associated protein 1) Length = 923 Score = 41.2 bits (95), Expect = 0.003 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 30/188 (15%) Frame = +1 Query: 142 HDFEDSDGKE-------SCSLTSEH-----QKEVKAIEWRPNSGKMIAVGCKGG------ 267 ++ ED D +E S +T +H Q +VK + + P + +++AVG G Sbjct: 230 NESEDDDKQEEVDISKYSWRITKKHFFYANQAKVKCVTFHPAT-RLLAVGFTSGEFRLYD 288 Query: 268 ----ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVD-------VLRGSSTELV 414 + S N + S + + AF GQ ++ + + + + Sbjct: 289 LPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDST 348 Query: 415 SALCWKPDGRYLASASCNGQSFTIWDVSEGLG-TPIRRGLSSISLVRWSPSGDYFLTAKF 591 ++L + PDG + +AS +G+ +WD++ G SS++ V+++ G ++ Sbjct: 349 NSLAYSPDGSRVVTASEDGK-IKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSL 407 Query: 592 DGTFHLWE 615 DGT W+ Sbjct: 408 DGTVRAWD 415
>PFS2_YEAST (P42841) Protein PFS2| Length = 465 Score = 41.2 bits (95), Expect = 0.003 Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVSE-GLGTPIRRGLSSISLVRWSPSGDYFLTA 585 ++ A+ W P+GR L A+ +G+ F++W+ S T ++ S+++ +++S D+ ++ Sbjct: 95 VIPAIQWTPEGRRLVVATYSGE-FSLWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISG 153 Query: 586 KFDGTFHLWETN 621 DG +W+ N Sbjct: 154 DADGMIKIWQPN 165 Score = 37.4 bits (85), Expect = 0.041 Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 21/188 (11%) Frame = +1 Query: 112 FVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLW---S 282 FV+ D + + S+GK+ L+ H +VK+ +W P G + + + LW S Sbjct: 192 FVTCSDDNILKIWNFSNGKQERVLSGHHW-DVKSCDWHPEMGLIASASKDNLVKLWDPRS 250 Query: 283 ASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDV------LRGSSTELV--------SA 420 + ++ K V + F +G+ I D +R S EL+ Sbjct: 251 GNCISSILKFKHTVLKTRFQP-TKGNLLMAISKDKSCRVFDIRYSMKELMCVRDETDYMT 309 Query: 421 LCWKPDGRYLASASCNGQSFTIWDVSEGLGTPI----RRGLSSISLVRWSPSGDYFLTAK 588 L W P + + +C S +D+ + L PI I+ + ++P G F TA Sbjct: 310 LEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAA 369 Query: 589 FDGTFHLW 612 D T W Sbjct: 370 KDRTIRFW 377 Score = 31.6 bits (70), Expect = 2.3 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 I ++W+P G + A + G F LW +++T E Sbjct: 96 IPAIQWTPEGRRLVVATYSGEFSLWNASSFTFE 128
>SPG16_MOUSE (Q8K450) Sperm-associated antigen 16 protein (PF20 protein homolog)| Length = 639 Score = 40.8 bits (94), Expect = 0.004 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = +1 Query: 385 VLRGSS-TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWS 558 +L GS T+ +S C+ P G LA++S + +WD+++G T G + ++ W Sbjct: 395 LLTGSGHTDWLSGCCFHPSGSKLATSS-GDSTIKLWDLNKGECTLTLEGHNHAVWSCTWH 453 Query: 559 PSGDYFLTAKFDGTFHLWETNT 624 GD+ +A D T +W+ N+ Sbjct: 454 SCGDFVASASLDMTSKIWDVNS 475 Score = 34.7 bits (78), Expect = 0.27 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTF 603 W G ++ASAS + S IWDV SE + S++ + + P + LTA D T Sbjct: 452 WHSCGDFVASASLDMTS-KIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTL 510 Query: 604 HLWETNTWTSE 636 +W+ T E Sbjct: 511 SVWDARTGKCE 521
>GBLP_ORENI (O42249) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 40.8 bits (94), Expect = 0.004 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 147 HTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 205 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G S ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPNRYWLCAAT--GPSIKIWDLEG 263 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 264 KIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGT 316
>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491| Length = 348 Score = 40.8 bits (94), Expect = 0.004 Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 20/167 (11%) Frame = +1 Query: 187 SEHQKEVKAIEWRPNSGKMIAVGCKGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGST 363 S Q + A+ P+ GK +AV I L + V S +S V ++F + Sbjct: 58 SGFQGIITALNITPD-GKYLAVATADNQITLIDLANQEVVYSQRSPV--NNFADLAISAD 114 Query: 364 GQWIL------VDVLRGSS----------TELVSALCWKPDGRYLASASCNGQSFTIWDV 495 GQW+ VDV R T+ VS + + PDG + S S ++ IW+ Sbjct: 115 GQWLAIAADNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWER 174 Query: 496 SEG-LGTPIRRGLSSISLVRWSPSGDYFLTAKF--DGTFHLWETNTW 627 + G L + L + V ++P G F+T D T W+ NT+ Sbjct: 175 ASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTF 221
>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143| Length = 1191 Score = 40.8 bits (94), Expect = 0.004 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +1 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRR-GLSSISL--VRWSPS 564 G T+ V + PDG+ L S +GQ +WD+ G IR+ GL ++ V W P+ Sbjct: 681 GGHTKSVDDAQFSPDGQTLVSVCRDGQ-IRLWDLD---GNLIRQFGLPEVAFFGVNWHPN 736 Query: 565 GDYFLTAKFDGTFHLW 612 G+ A DGT LW Sbjct: 737 GNLLAVAADDGTVRLW 752 Score = 34.3 bits (77), Expect = 0.35 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFH 606 + P+G+ A+A Q+ IWD+ L ++ S+ V +SP G+ + D T Sbjct: 609 FSPNGKIFATAG-QDQTVKIWDLDGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVR 667 Query: 607 LW 612 LW Sbjct: 668 LW 669 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVR 552 L+ L+G + S + + PDG LAS S ++ +W G + G S+ + Sbjct: 634 LLQTLKGHQDSVYS-VSFSPDGEILASTS-RDRTVRLWHWRSGKTLAVLGGHTKSVDDAQ 691 Query: 553 WSPSGDYFLTAKFDGTFHLWE 615 +SP G ++ DG LW+ Sbjct: 692 FSPDGQTLVSVCRDGQIRLWD 712 Score = 30.8 bits (68), Expect = 3.9 Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 16/156 (10%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 VS++P LA S +D+ TV + GK + ++ H K V ++ P+ +++V Sbjct: 648 VSFSPDGEILASTS-RDR-TVRLWHWRSGK-TLAVLGGHTKSVDDAQFSPDGQTLVSVCR 704 Query: 259 KGGICLWSASYPGNVASVKSGVTSSSFGA--FPRGS--------------TGQWILVDVL 390 G I LW GN+ + FG P G+ T Q + L Sbjct: 705 DGQIRLWDLD--GNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQGEIKATL 762 Query: 391 RGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVS 498 G E V+ + + PDG+ L S+S NG S W S Sbjct: 763 SGHD-EFVTRVVFTPDGKQLFSSSSNG-SVIHWSTS 796
>RAE1L_HUMAN (P78406) mRNA-associated protein mrnp 41 (Rae1 protein homolog)| Length = 368 Score = 40.4 bits (93), Expect = 0.005 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 2/151 (1%) Frame = +1 Query: 178 SLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRG 357 S T+++ +K IE S ++GC + + PGN + +G ++ + Sbjct: 20 SATTDNHNPMKDIE--VTSSPDDSIGC---LSFSPPTLPGNF--LIAGSWANDVRCWEVQ 72 Query: 358 STGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +GQ I + T V +CW DG + +ASC+ ++ +WD+S I + + Sbjct: 73 DSGQTI--PKAQQMHTGPVLDVCWSDDGSKVFTASCD-KTAKMWDLSSNQAIQIAQHDAP 129 Query: 538 ISLVRW--SPSGDYFLTAKFDGTFHLWETNT 624 + + W +P+ +T +D T W+T + Sbjct: 130 VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160
>GBB_ARATH (P49177) Guanine nucleotide-binding protein beta subunit| (transducin) (AGB1) Length = 377 Score = 40.4 bits (93), Expect = 0.005 Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 31/179 (17%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------------------SYPG 297 C H +V +++W P ++++ G + +W+A ++ Sbjct: 58 CRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP 117 Query: 298 NVASVKSGVTSSSFGAFPRGSTGQ---WILVDVLRGSSTELVSALCWKPDGRYLASASCN 468 N SV G S F ST + V + VS + P+ S Sbjct: 118 NGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177 Query: 469 GQSFTIWDVSEGLGTPIRRG---------LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 Q+ +WDV+ GL T + G + S+S+ +P ++F++ D T LW+T Sbjct: 178 DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNP--NWFISGSCDSTARLWDT 234
>WD42_DICDI (P54686) WD-repeat protein 2| Length = 597 Score = 40.4 bits (93), Expect = 0.005 Identities = 24/92 (26%), Positives = 39/92 (42%) Frame = +1 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWS 558 +D RG+ T+L + P G+YLAS C+ + +W E + I+ V WS Sbjct: 478 LDNHRGAITDL----SYSPCGKYLASG-CSNREVIVWSGKEAKSKGWVNHTARINAVAWS 532 Query: 559 PSGDYFLTAKFDGTFHLWETNTWTSEPWSSSN 654 + +A D ++W T+ P N Sbjct: 533 NDSKFVASASLDSQIYIWNVENPTASPVQVKN 564 Score = 33.9 bits (76), Expect = 0.46 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = +1 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLG----TPIRRGLSSISLV 549 ++ G T V+ + + PDG L + + ++F ++D G P ++ I Sbjct: 184 NIAAGDFTRFVNCVRFSPDGNKLVTVGADKKAF-VYDGKTGEKLIELNPAQQHTGGIYGC 242 Query: 550 RWSPSGDYFLTAKFDGTFHLWETNT 624 WS + LTA D + +W+T T Sbjct: 243 SWSADNNRVLTASADKSCKIWDTTT 267
>STRAP_MOUSE (Q9Z1Z2) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) Length = 351 Score = 40.4 bits (93), Expect = 0.005 Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 17/161 (10%) Frame = +1 Query: 187 SEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTG 366 S H +K W + ++++ K + LW + V S+ ++ SS P G Sbjct: 140 SGHTSGIKKALWCSDDKQILSADDKT-VRLWDHATMTEVKSLNFNMSVSSMEYIPEGE-- 196 Query: 367 QWILVDVLRGSSTELVSALCWKPDGRYLASASCN--------------GQSFTIWDVSEG 504 ILV + G S SA+ +P + A A+ N G+ F ++ Sbjct: 197 --ILV-ITYGRSIAFHSAVSLEPIKSFEAPATINSASLHPEKEFLVAGGEDFKLYKYDYN 253 Query: 505 LGTPI---RRGLSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 G + + I VR+SP G+ + + DGT LW+T Sbjct: 254 SGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)| (COMPASS component swd3) (Complex proteins associated with set1 protein swd3) Length = 380 Score = 40.4 bits (93), Expect = 0.005 Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 2/166 (1%) Frame = +1 Query: 139 VHDFEDSDG-KESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVK 315 + ++E G E C+L H+K V + PN + G I +WSA + Sbjct: 35 IRNYESHSGFSEYCTLFG-HEKSVTCVSVSPNKRWIATSSSDGTIKIWSA--------LT 85 Query: 316 SGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 + + FG + RG +S + W +YLASAS + ++ IWD Sbjct: 86 FRLECTLFGHY-RG------------------ISQVKWATGSKYLASAS-DDKTIRIWDF 125 Query: 496 SEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 + +G ++ +S + ++P G ++ +D T +W T Sbjct: 126 EKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
>PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog)| Length = 505 Score = 40.0 bits (92), Expect = 0.006 Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%) Frame = +1 Query: 154 DSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA----------SYPGNV 303 D ++ + H K+V ++ + P+ + + I +WS ++ G+V Sbjct: 251 DKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSV 310 Query: 304 ASVKSGVT-----SSS---FGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASA 459 + T SSS + AF TG+ +L V SS ++ + PDG + Sbjct: 311 TGLSLHATGDYLLSSSDDQYWAFSDIQTGR-VLTKVTDESSGCALTCAQFHPDGLIFGTG 369 Query: 460 SCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWE 615 + + Q IWD+ E G S I+ + +S +G Y TA D + LW+ Sbjct: 370 TMDSQ-IKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 421
>GBLP_RAT (P63245) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 146 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 204 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 205 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 262 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 263 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 315
>GBLP_PIG (P63246) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 146 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 204 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 205 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 262 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 263 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 315
>GBLP_MOUSE (P68040) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) (p205) (12-3) Length = 316 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 146 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 204 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 205 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 262 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 263 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 315
>GBLP_MACFA (Q4R7Y4) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 316 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 146 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 204 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 205 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 262 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 263 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 315
>GBLP_HUMAN (P63244) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 146 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 204 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 205 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 262 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 263 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 315
>GBLP_CHICK (P63247) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 317 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 205 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 263 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 264 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>GBLP_BOVIN (P63243) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 146 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 204 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G ++++ALC+ P+ +L +A+ G S IWD+ Sbjct: 205 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEG 262 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 E + T + + + WS G D +W+ T Sbjct: 263 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 315
>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 605 Score = 40.0 bits (92), Expect = 0.006 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Frame = +1 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-----LGTPIRRGLSSISLVRWS 558 G + V+ + + PDG A+AS +GQ F I+D G LG I + WS Sbjct: 185 GDHSRFVNCVRFSPDGNRFATASADGQIF-IYDGKTGEKVCALGESKAHD-GGIYAISWS 242 Query: 559 PSGDYFLTAKFDGTFHLWETN 621 P + L+A D T +W+ N Sbjct: 243 PDSTHLLSASGDKTSKIWDVN 263 Score = 30.4 bits (67), Expect = 5.1 Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 5/194 (2%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSL--TSEHQKEVKAIEWRPNSGKMIAV 252 V ++P + A S Q+ ++D G++ C+L + H + AI W P+S +++ Sbjct: 194 VRFSPDGNRFATASADGQIFIYD--GKTGEKVCALGESKAHDGGIYAISWSPDSTHLLSA 251 Query: 253 GCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWK 432 +W NV SV S FP GS ++D G W+ Sbjct: 252 SGDKTSKIWDV----NVNSVVS--------TFPMGSN----VLDQQLG--------CLWQ 287 Query: 433 PDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSG--DYFLTAKFDGTF 603 D +L S S +G + + + +G S SI + +G Y + DG Sbjct: 288 KD--HLLSISLSGYINYLDKNNPSKPLRVIKGHSKSIQCLTVHRNGGKSYIYSGSHDGHI 345 Query: 604 HLWETNTWTSEPWS 645 + W++ T ++ +S Sbjct: 346 NYWDSETGENDSFS 359
>SOF1_YEAST (P33750) Protein SOF1| Length = 489 Score = 40.0 bits (92), Expect = 0.006 Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 26/189 (13%) Frame = +1 Query: 133 VTVHDFEDSDGKESCSLTSEH--------QKEVKAIEWRPNSGKMIAVGCKGGICLWSAS 288 + V D+ + + ++ S+T+E + + I+ + G K I LW + Sbjct: 150 INVDDYSNKNSSDNDSVTNEEGLIRTFDGESAFQGIDSHRENSTFATGGAK--IHLWDVN 207 Query: 289 YPGNVASVKSG---VTSSSFGA------FPRGSTGQWILVDVLRGSSTELV------SAL 423 V+ + G +TS F GS +L D+ S T+ + +A+ Sbjct: 208 RLKPVSDLSWGADNITSLKFNQNETDILASTGSDNSIVLYDLRTNSPTQKIVQTMRTNAI 267 Query: 424 CWKPDGRY---LASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFD 594 CW P + A+ N + + ++S L + +S++ V +SP+GD +T +D Sbjct: 268 CWNPMEAFNFVTANEDHNAYYYDMRNLSRSLNV-FKDHVSAVMDVDFSPTGDEIVTGSYD 326 Query: 595 GTFHLWETN 621 + +++TN Sbjct: 327 KSIRIYKTN 335
>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog| Length = 492 Score = 39.7 bits (91), Expect = 0.008 Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 21/191 (10%) Frame = +1 Query: 106 LAFVSGKDQ-VTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVGCKGGICLW 279 L+ G D+ V ++D+E KE T + H K++ A+ P++ I+ I +W Sbjct: 223 LSLTGGIDKTVVLYDYE----KEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVW 278 Query: 280 SASYPGNVASV---KSGVTSSSFGA-----FPRGSTGQWILVDVLRGSSTELVS------ 417 SA+ + A + ++ VT S A W D+ G S VS Sbjct: 279 SATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQ 338 Query: 418 ----ALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLT 582 ++ + PDG + + + IWD+ ++ + +++ + +S +G Y T Sbjct: 339 IAVHSIEFHPDGLIFGTGAADA-VVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLAT 397 Query: 583 AKFDGTFHLWE 615 DG LW+ Sbjct: 398 GSEDGEVKLWD 408
>STRAP_HUMAN (Q9Y3F4) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats) Length = 350 Score = 39.3 bits (90), Expect = 0.011 Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Frame = +1 Query: 187 SEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTG 366 S H +K W ++++ K + LW + V S+ ++ SS P G Sbjct: 140 SGHTSGIKKALWCSEDKQILSADDKT-VRLWDHATMTEVKSLNFNMSVSSMEYIPEGE-- 196 Query: 367 QWILVDVLRGSSTELVSALCWKPDGRYLASASCN--------------GQSFTIWDVSEG 504 ILV + G S SA+ P + A A+ N G+ F ++ Sbjct: 197 --ILV-ITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPEKEFLVAGGEDFKLYKYDYN 253 Query: 505 LGTPI---RRGLSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 G + + I VR+SP G+ + + DGT LW+T Sbjct: 254 SGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation| suppressor protein) (Repressor AER2) Length = 713 Score = 39.3 bits (90), Expect = 0.011 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = +1 Query: 397 SSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDY 573 SS + ++C+ PDG++LA+ + + IWD+ I +G I + + PSGD Sbjct: 441 SSDLYIRSVCFSPDGKFLATGA-EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK 499 Query: 574 FLTAKFDGTFHLWETNT 624 ++ D T +W+ T Sbjct: 500 LVSGSGDRTVRIWDLRT 516
>TUP1_KLULA (P56094) Transcriptional repressor TUP1| Length = 682 Score = 39.3 bits (90), Expect = 0.011 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Frame = +1 Query: 190 EHQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS------------------YPGNVASVK 315 EH V + + + G+ +A GC ++ S P N Sbjct: 319 EHSSVVCCVRFS-SDGEFLATGCNKTTQVYKVSTGELVARLSDDSASQPQPQPQNQTVTA 377 Query: 316 SGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 TS+S G+ TG SS + ++C+ PDG++LA+ + + IWD+ Sbjct: 378 ETSTSNSNGSSAEDGTGNQNSA-ASTASSDLYIRSVCFSPDGKFLATGA-EDKLIRIWDL 435 Query: 496 -SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 ++ + ++ I + + PSG+ ++ D T +W+ T T Sbjct: 436 ETKKIVMTLKGHEQDIYSLDYFPSGNKLVSGSGDRTVRIWDLTTGT 481
>TOLB_GEOSL (Q74H67) Protein tolB precursor| Length = 432 Score = 39.3 bits (90), Expect = 0.011 Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 5/165 (3%) Frame = +1 Query: 82 SWNPHKHCLAFVS---GKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAV 252 +W+P +AFVS GK QV + + +DG + LT+ V W P +++ Sbjct: 297 AWSPDGKRIAFVSDRLGKPQVFIMN---ADGSDVRRLTTSGAYNVSP-RWSPKGDRLVYC 352 Query: 253 GCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWK 432 +GG ++S + G + + +TS PR W Sbjct: 353 RQEGGFQIYSIATDG---TGDTRLTSEGSNEHPR------------------------WS 385 Query: 433 PDGRYLASASCNGQSFTIWDV-SEGLG-TPIRRGLSSISLVRWSP 561 PDGR+L +S I+ + S+G G T + R S WSP Sbjct: 386 PDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYRSKGKASHPTWSP 430 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRR----GLSSISLVRWSPSGDYFLTAKFD 594 W PDG+ +A S ++ + G+ +RR G ++S RWSP GD + + + Sbjct: 298 WSPDGKRIAFVSDRLGKPQVF-IMNADGSDVRRLTTSGAYNVS-PRWSPKGDRLVYCRQE 355 Query: 595 GTFHLWETNT 624 G F ++ T Sbjct: 356 GGFQIYSIAT 365
>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5| (TBP-associated factor 5) (TBP-associated factor 90 kDa) (TAFII-90) Length = 798 Score = 38.9 bits (89), Expect = 0.014 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +1 Query: 379 VDVLRGSSTELVS-ALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG--LSSISLV 549 V + G + ++S A+C PDGR+L++ S +G +WD+ G RG ++I + Sbjct: 644 VRLFLGHTAPVISIAVC--PDGRWLSTGSEDG-IINVWDIGTGKRLKQMRGHGKNAIYSL 700 Query: 550 RWSPSGDYFLTAKFDGTFHLWETNTWTSEP 639 +S G+ ++ D T +W+ T+EP Sbjct: 701 SYSKEGNVLISGGADHTVRVWDLKKATTEP 730 Score = 33.9 bits (76), Expect = 0.46 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTF 603 + P G Y A+AS + Q+ +W I G L+ + V + P+G Y T D T Sbjct: 575 FSPLGHYFATAS-HDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTC 633 Query: 604 HLWETNTWTS 633 +W+ +T S Sbjct: 634 RMWDVSTGDS 643 Score = 33.1 bits (74), Expect = 0.78 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAK 588 V + + PD +YL S S ++ +W + +G + + V +SP G YF TA Sbjct: 528 VYSTSFSPDNKYLLSGS-EDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATAS 586 Query: 589 FDGTFHLW 612 D T LW Sbjct: 587 HDQTARLW 594
>PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear| matrix protein 200) (hPso4) Length = 504 Score = 38.9 bits (89), Expect = 0.014 Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 18/172 (10%) Frame = +1 Query: 154 DSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWS---ASYPGNVASVKSGV 324 D ++ + H K+V ++ + P+ + + I +WS AS V + +S V Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAV 309 Query: 325 TSSSFGA-----FPRGSTGQWILVDVLRG-------SSTELVSALC--WKPDGRYLASAS 462 T S A W D+ G T S C + PDG + + Sbjct: 310 TGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGT 369 Query: 463 CNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWE 615 + Q IWD+ E G S I+ + +S +G Y TA D + LW+ Sbjct: 370 MDSQ-IKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 420
>RAE1L_ARATH (Q38942) Rae1-like protein At1g80670| Length = 349 Score = 38.9 bits (89), Expect = 0.014 Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 2/157 (1%) Frame = +1 Query: 154 DSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSS 333 +S+ +S +T + ++ + P + ++A + W S G + Sbjct: 11 NSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSG-----------A 59 Query: 334 SFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGT 513 S + P+ S S + V WK DG + S C+ Q+ +W + G G Sbjct: 60 SLASAPKASI-----------SHDQPVLCSAWKDDGTTVFSGGCDKQA-KMWPLLSG-GQ 106 Query: 514 PIRRGLSS--ISLVRWSPSGDYFLTAKFDGTFHLWET 618 P+ + I+ + W P + T +D T W+T Sbjct: 107 PVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
>AAC3_DICDI (P14197) AAC-rich mRNA clone AAC3 protein (Fragment)| Length = 437 Score = 38.9 bits (89), Expect = 0.014 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 2/136 (1%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 ++K+ ++ W N K+ + G G + +W+ GN + + +SS S Sbjct: 123 NKKKSTSVAWNANGTKIASSGSDGIVRVWNFDPLGNSNNNNNSNNTSS------NSKNNN 176 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG--LGTPIRRGLSSISL 546 I + + + W P L +++ + IWDV G +GT + +I Sbjct: 177 IKETIELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGT-VSTNSENID- 234 Query: 547 VRWSPSGDYFLTAKFD 594 VRWSP G + + D Sbjct: 235 VRWSPDGQFIVACTRD 250
>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26| Length = 514 Score = 38.5 bits (88), Expect = 0.019 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQS-FTIWDVSEG-LGTPIRRGLS-SISLVRWSPSGDYFLT 582 VS + W PD YL + + S +W+V G L T + + S++ V W+P G F+T Sbjct: 257 VSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVT 316 Query: 583 AKFDGTFHLWETNTWTSEPWSSSNGICNW 669 G F+ + + + W C W Sbjct: 317 GGQRGQFYQCDLDGNLLDSWEGVRVQCLW 345
>GBB1_TOBAC (P93397) Guanine nucleotide-binding protein beta subunit 1| Length = 377 Score = 38.5 bits (88), Expect = 0.019 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 32/180 (17%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------------------SYPG 297 C + H +V +++W P ++++ G + +W+A ++ Sbjct: 58 CRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP 117 Query: 298 NVASVKSGVTSSSFGAF----PRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASC 465 + SV G S F P G + +L G VS+ + PD S Sbjct: 118 SGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHK-GYVSSCQYVPDEDTHLITSS 176 Query: 466 NGQSFTIWDVSEGLGTPIRRG---------LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 Q+ +WD++ GL T + G + S+S+ +P F++ D T LW+T Sbjct: 177 GDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPR--LFVSGSCDTTARLWDT 234 Score = 29.6 bits (65), Expect = 8.7 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 4/161 (2%) Frame = +1 Query: 154 DSDGKESCS-LTSEHQKEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVT 327 D DG S + S H+ V + ++ P+ + C LW + +G+ Sbjct: 141 DKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWD---------ITTGLR 191 Query: 328 SSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD--VSE 501 +S FG + G + ++ S + R S SC+ + +WD V+ Sbjct: 192 TSVFGG------------EFQSGHTADVQSVSISSSNPRLFVSGSCDTTA-RLWDTRVAS 238 Query: 502 GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 ++ V++ P G+ F T DGT L++ T Sbjct: 239 RAQRTFYGHEGDVNTVKFFPDGNRFGTGSEDGTCRLFDIRT 279
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 38.5 bits (88), Expect = 0.019 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 17/158 (10%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGG-ICLWSA-------SYPGNVASVKSGVTSSSFGAF 348 H V + P SG+++ G + + LW+ S G+ + V S +SS Sbjct: 15 HSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELV 74 Query: 349 PRGS-TGQWILVD-----VLRGSSTELVSALC--WKPDGRYLASASCNGQSFTIWDVS-E 501 GS +G + D ++R + S C + P G ++AS S + + +WDV + Sbjct: 75 VAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTD-TNVKLWDVRRK 133 Query: 502 GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 G + ++++++SP G + +TA D T LW+ Sbjct: 134 GCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWD 171
>MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer 1 (MAPK| organizer 1) Length = 315 Score = 38.1 bits (87), Expect = 0.024 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 4/152 (2%) Frame = +1 Query: 196 QKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWI 375 Q V+A+ + + ++ G + LWS S RG+ Sbjct: 25 QGAVRAVRFNADGNYLLTCGSDKSLKLWSVS---------------------RGT----- 58 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQS---FTIWDVSEGLGTPIRRG-LSSIS 543 L+ G E++ A DG Y S C+ S +WDV+ G T RG ++ Sbjct: 59 LLKTYSGHGYEVLDA-----DGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVN 113 Query: 544 LVRWSPSGDYFLTAKFDGTFHLWETNTWTSEP 639 V+++ L+ DGT W+T + EP Sbjct: 114 CVQFNEEATVMLSGSIDGTVRCWDTRSRRMEP 145
>HIRL_SCHPO (P87314) Histone transcription regulator 1 homolog| Length = 932 Score = 38.1 bits (87), Expect = 0.024 Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 9/171 (5%) Frame = +1 Query: 151 EDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICL-W--SASYPGNVASVKSG 321 E+ D + S H V ++ + PN G+ +A G + + W + PG Sbjct: 59 ENEDLPKQLCCMSTHTGTVTSVRFSPN-GQYLASGSDDRVVIIWHKEEAIPG-------- 109 Query: 322 VTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSE 501 S+FG+ + T W L G + + LCW D + + S + S +W+ Sbjct: 110 -LGSTFGSGEK-HTENWRSYRRLLGHDND-IQDLCWSYDSQLVVSVGLDS-SIIVWN--- 162 Query: 502 GLGTPIRR------GLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 GT R S + + + P+G YF T D T +W + ++ E Sbjct: 163 --GTTFERLKRIEAHQSHVKGITFDPAGKYFATESDDRTIKVWRVSDFSIE 211
>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26| Length = 514 Score = 38.1 bits (87), Expect = 0.024 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQS-FTIWDVSEG-LGTPIRRGLS-SISLVRWSPSGDYFLT 582 VS + W PD YL + + S +W+V G L T + + S++ V W+P G F+T Sbjct: 257 VSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVT 316 Query: 583 AKFDGTFHLWETNTWTSEPWSSSNGICNW 669 G F+ + + + W C W Sbjct: 317 GGQRGQFYQCDLDGNLLDSWEGVRVQCLW 345
>GBB_SOLTU (P93563) Guanine nucleotide-binding protein beta subunit| Length = 377 Score = 38.1 bits (87), Expect = 0.024 Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 32/180 (17%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------------------SYPG 297 C + H +V +++W P ++++ G + +W+A ++ Sbjct: 58 CRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP 117 Query: 298 NVASVKSGVTSSSFGAF----PRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASC 465 + SV G S+ F P G + +L G VS+ + PD S Sbjct: 118 SGQSVACGGLDSACSIFNLNSPIDKDGIHPVSRMLSGHK-GYVSSCQYVPDEDTHLITSS 176 Query: 466 NGQSFTIWDVSEGLGTPIRRG---------LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 Q+ +WD++ GL T + G + S+S+ +P F++ D T LW+T Sbjct: 177 GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISSSNPK--LFVSGSCDTTARLWDT 234
>GBB_NICPL (P93339) Guanine nucleotide-binding protein beta subunit (NpGPB1)| Length = 377 Score = 38.1 bits (87), Expect = 0.024 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 32/180 (17%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------------------SYPG 297 C + H +V +++W P ++++ G + +W+A ++ Sbjct: 58 CRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP 117 Query: 298 NVASVKSGVTSSSFGAF----PRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASC 465 + SV G S F P G + +L G VS+ + PD S Sbjct: 118 SGHSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHK-GYVSSCQYVPDEDTHLITSS 176 Query: 466 NGQSFTIWDVSEGLGTPIRRG---------LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 Q+ +WD++ GL T + G + S+S+ +P F++ D T LW+T Sbjct: 177 GDQTCVLWDITTGLRTSVFGGEFQFGHTADVQSVSISSSNPR--LFVSGSCDTTARLWDT 234
>A16L1_HUMAN (Q676U5) Autophagy-related protein 16-1 (APG16-like 1)| Length = 607 Score = 38.1 bits (87), Expect = 0.024 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPI--RRGLSSISLVRWSPSGDYFLTAKFDGT 600 + PDG Y+A+ S G S IW V G + ++ SSI+ V WSPSG + ++ Sbjct: 542 FSPDGSYVAAGSAEG-SLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK 600 Query: 601 FHLW 612 LW Sbjct: 601 AVLW 604 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +1 Query: 67 DTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMI 246 D +V ++P +A +G + +++ + GK L+ +H + A+ W P+ ++ Sbjct: 536 DWTRVVFSPDGSYVA--AGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVV 593 Query: 247 AV--GCKGGICLWS 282 +V GCK LW+ Sbjct: 594 SVDKGCKA--VLWA 605
>RBBP4_XENTR (Q5M7K4) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 424 Score = 38.1 bits (87), Expect = 0.024 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGNLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog| Length = 899 Score = 37.7 bits (86), Expect = 0.032 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 21/208 (10%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGK-DQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAV 252 V+ N LAF + K Q+ V +++ ES L + H + ++ + P+ +++ V Sbjct: 302 VTINKSGEWLAFGASKLGQLLVWEWQS----ESYILKQQGHFDSMNSLVYSPDGQRIVTV 357 Query: 253 GCKGGICLWSASYPGNVASVK---SGVTSSSFGAFPR--------GSTGQWILV---DVL 390 G I +W + + SG+T+ F GS W L+ + Sbjct: 358 ADDGKIKVWDTESGFCIVTFTEHTSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFR 417 Query: 391 RGSSTELVSALCWK--PDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSP 561 ++ E +S C P G +A+ S + IW V G L + +S + ++P Sbjct: 418 TFTAPERLSFSCMAVDPSGEIVAAGSVDSFDIHIWSVQTGQLLDRLSGHEGPVSSLAFAP 477 Query: 562 SGDYFLTAKFDGTFHLWE--TNTWTSEP 639 +G ++ +D T +W T TSEP Sbjct: 478 NGGLLVSGSWDRTARIWSIFNRTQTSEP 505
>PRP4_YEAST (P20053) U4/U6 small nuclear ribonucleoprotein PRP4| Length = 465 Score = 37.7 bits (86), Expect = 0.032 Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 24/165 (14%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC--------------KGGICLWS--ASYPGNVASVKSGV 324 H ++ AI+W P+S + + C +GG+ L + ++ VK Sbjct: 217 HVGKIGAIDWHPDSNNQM-ISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHP 275 Query: 325 TSSSFGAFPRGSTGQWILVD-------VLRGSSTELVSALCWKPDGRYLASASCNGQSFT 483 + G+ T W L D +L+ + V +L ++ DG + S + S Sbjct: 276 SGKFIGSASHDMT--WRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSM- 332 Query: 484 IWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWE 615 +WD+ G G S I V WSP+G T DG ++W+ Sbjct: 333 LWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWD 377
>WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| (NORI-1) Length = 605 Score = 37.7 bits (86), Expect = 0.032 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = +1 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS----ISLVRWSP 561 G + V+ + + PDG A+AS +GQ + I+D G G + I + WSP Sbjct: 185 GDHSRFVNCVRFSPDGNRFATASADGQIY-IYDGKTGEKVCALGGSKAHDGGIYAISWSP 243 Query: 562 SGDYFLTAKFDGTFHLWETN 621 + L+A D T +W+ + Sbjct: 244 DSTHLLSASGDKTSKIWDVS 263 Score = 31.2 bits (69), Expect = 3.0 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 5/194 (2%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSL--TSEHQKEVKAIEWRPNSGKMIAV 252 V ++P + A S Q+ ++D G++ C+L + H + AI W P+S +++ Sbjct: 194 VRFSPDGNRFATASADGQIYIYD--GKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSA 251 Query: 253 GCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWK 432 +W S +S FP GST ++D G W+ Sbjct: 252 SGDKTSKIWDVS------------VNSVVSTFPMGST----VLDQQLG--------CLWQ 287 Query: 433 PDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSG--DYFLTAKFDGTF 603 D +L S S +G + + + +G S SI + +G Y + DG Sbjct: 288 KD--HLLSVSLSGYINYLDRNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHI 345 Query: 604 HLWETNTWTSEPWS 645 + W++ T ++ ++ Sbjct: 346 NYWDSETGENDSFA 359
>RBP4A_XENLA (O93377) Histone-binding protein RBBP4-A (Retinoblastoma-binding| protein 4-A) (RBBP-4-A) (Retinoblastoma-binding protein p48-A) Length = 424 Score = 37.7 bits (86), Expect = 0.032 Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFE------DSDGKESCSLTSE-HQKE 204 K+ + + + + P C+ A + V V D+ D G+ + +L HQKE Sbjct: 119 KITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGNLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>RBBP4_PONPY (Q5RF92) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 424 Score = 37.7 bits (86), Expect = 0.032 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGHLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>RBBP4_MOUSE (Q60972) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) Length = 424 Score = 37.7 bits (86), Expect = 0.032 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGHLLSASDDHTICLWDIS------------------AVPK--KGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>RBBP4_HUMAN (Q09028) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) Length = 424 Score = 37.7 bits (86), Expect = 0.032 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGHLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>RBBP4_CHICK (Q9W7I5) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) Length = 424 Score = 37.7 bits (86), Expect = 0.032 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGHLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>RBBP4_BOVIN (Q3MHL3) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 424 Score = 37.7 bits (86), Expect = 0.032 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGHLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>WDR1_XENLA (Q9W7F2) WD-repeat protein 1 (Actin-interacting protein 1) (XAIP1)| Length = 608 Score = 37.7 bits (86), Expect = 0.032 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS----ISLVRWSPSGD 570 + V+ + + PDG LASA +GQ F ++D G G + I V WSP G Sbjct: 189 SRFVNCVRFSPDGSKLASAGADGQIF-LYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGT 247 Query: 571 YFLTAKFDGTFHLWE 615 L+A D T +W+ Sbjct: 248 QLLSASGDKTTKIWD 262
>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72) Length = 643 Score = 37.7 bits (86), Expect = 0.032 Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 17/175 (9%) Frame = +1 Query: 151 EDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS----------YPGN 300 EDSDG S L S H V + P++ +++ LWS + G Sbjct: 367 EDSDG--SVRLLS-HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGP 423 Query: 301 VASVKSGVTSSSFGAFPRGSTGQWILVD------VLRGSSTELVSALCWKPDGRYLASAS 462 V V G F T Q D V G ++ V + + P+ Y+ + S Sbjct: 424 VWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSD-VDCVTFHPNSAYVLTGS 482 Query: 463 CNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 + ++ +WDV G + G + ++ V +P G +A +G HLW+ T Sbjct: 483 SD-KTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGT 536 Score = 34.3 bits (77), Expect = 0.35 Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 3/149 (2%) Frame = +1 Query: 175 CSLTSEH-QKEVKAIEWRPNSGKMIAVGCKGG-ICLWSASYPGNVASVKSGVTSSSFGAF 348 C T H + E+ P+S MIA G + I LWS A KS S+S Sbjct: 316 CMYTFHHTNNNMNCAEFSPDS-TMIACGFQESYIRLWSIK-----ADKKSLPKSTSV--- 366 Query: 349 PRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG 528 S G L+ S + V + PD +YL S S S +W V +G Sbjct: 367 -EDSDGSVRLL-----SHSGPVYGTTFSPDNKYLLSCS-EDASARLWSVDTKTALVAYKG 419 Query: 529 LSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 + + V + P G YF TA D T LW Sbjct: 420 HTGPVWDVAFGPFGHYFATASHDQTAQLW 448
>APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1249 Score = 37.4 bits (85), Expect = 0.041 Identities = 49/188 (26%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Frame = +1 Query: 85 WNPHKHCLAFVSGKDQVTVHDFEDSDGKESCS-----LTSEHQKE-----VKAIEWRPNS 234 ++P LA S + + D ++ ++S + L+SE E VK W + Sbjct: 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG 810 Query: 235 GKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELV 414 K+I V K + L+ G +A + +G S+ + S + V L EL Sbjct: 811 DKII-VAAKNKVLLFDIHTSGLLAEIHTGHHSTI--QYCDFSPYDHLAVIALSQYCVEL- 866 Query: 415 SALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFD 594 W D R L A C G LS + V +SP G FLTA D Sbjct: 867 ----WNIDSR-LKVADCRGH------------------LSWVHGVMFSPDGSSFLTASDD 903 Query: 595 GTFHLWET 618 T +WET Sbjct: 904 QTIRVWET 911
>TOLB_CHRVO (Q7P1V3) Protein tolB precursor| Length = 428 Score = 37.4 bits (85), Expect = 0.041 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +1 Query: 400 STELVSALCWKPDGRYLASASCNGQSFTIW--DVSEGLGTPIRRGLSSISLVRWSPSG 567 STE + + W PDGR++A S Q +W D++ G + S S WSP G Sbjct: 194 STEPIISPSWSPDGRHIAYVSFASQKPVVWVQDLATGQRRAVANFKGSNSAPAWSPDG 251
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 37.4 bits (85), Expect = 0.041 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWD-VSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTF 603 W P+GR L + + +G+ FT+W+ ++ T ++ S + + WS + + LTA G Sbjct: 127 WTPEGRRLVTGASSGE-FTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYV 185 Query: 604 HLWETN 621 W++N Sbjct: 186 KYWQSN 191
>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20| Length = 606 Score = 37.4 bits (85), Expect = 0.041 Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 1/179 (0%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-HQKEVKAIEWRPNSGKMIAVG 255 ++W P LA S V+V D C+ T HQ + + ++ + Sbjct: 458 LAWQPFSSSLATASSDKTVSVWDARAG----LCTQTYYGHQNSCNGVSFNILGTQLASTD 513 Query: 256 CKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKP 435 G + LW VA++ +G ++ F R S ++++ C Sbjct: 514 ADGVVKLWDTRMTAEVATINTGKHPANKSCFDR---------------SGQVLAVAC--D 556 Query: 436 DGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 DG+ A ++ +G L + ++ V + P+G Y ++ D TF LW Sbjct: 557 DGKVKAYSTTDGV----------LQAELAGHEDAVQAVLFDPAGQYLVSCGSDNTFRLW 605
>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 658 Score = 37.0 bits (84), Expect = 0.054 Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGIC---LWSASYPGNVASVKSGVTSSS--------- 336 H V ++ SG+++A G G C LWS + P + S+ +G TS Sbjct: 19 HASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMSL-TGHTSPVESVRLNTPE 75 Query: 337 ---FGAFPRGSTGQWIL-----VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD 492 GS W L + L G + S L + P G ++AS S + +WD Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHPYGEFVASGS-QDTNIKLWD 133 Query: 493 VS-EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 + +G R ++ +R+SP G + +A D T LW+ Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>ELP2_YEAST (P42935) Elongator complex protein 2 (Gamma-toxin target 2)| Length = 788 Score = 37.0 bits (84), Expect = 0.054 Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 6/194 (3%) Frame = +1 Query: 106 LAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA 285 L +S K D E G +L H + +++W + +++A + +W Sbjct: 251 LTLLSNKQYKFQIDDELRVGINFEALIMGHDDWISSLQWHESRLQLLAATADTSLMVWEP 310 Query: 286 SYPGN--VASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASA 459 V S++ G SS + GS+G + S L + + Sbjct: 311 DETSGIWVCSLRLGEMSSKGASTATGSSGGFW-------------SCLWFTHERMDFFLT 357 Query: 460 SCNGQSFTIWDVSEGLGTPIRRGLSS----ISLVRWSPSGDYFLTAKFDGTFHLWETNTW 627 + S+ +W + + R G+S ++ + WSPSG+Y L D T L+ W Sbjct: 358 NGKTGSWRMWATKDNIICDQRLGISGATKDVTDIAWSPSGEYLLATSLDQTTRLFA--PW 415 Query: 628 TSEPWSSSNGICNW 669 + I W Sbjct: 416 IYDASGRKREIATW 429
>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 655 Score = 37.0 bits (84), Expect = 0.054 Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGIC---LWSASYPGNVASVKSGVTSSS--------- 336 H V ++ SG+++A G G C LWS + P + S+ +G TS Sbjct: 19 HASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMSL-TGHTSPVESVRLNTPE 75 Query: 337 ---FGAFPRGSTGQWIL-----VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD 492 GS W L + L G + S L + P G ++AS S + +WD Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICS-LDFHPYGEFVASGS-QDTNIKLWD 133 Query: 493 VS-EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 + +G R ++ +R+SP G + +A D T LW+ Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>RBP4B_XENLA (Q6INH0) Histone-binding protein RBBP4-B (Retinoblastoma-binding| protein 4-B) (RBBP-4-B) (Retinoblastoma-binding protein p48-B) Length = 424 Score = 37.0 bits (84), Expect = 0.054 Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN SG +++ ICLW S A P+ G+ + Sbjct: 179 GYGLSWNPNLSGNLLSASDDHTICLWDIS------------------AVPK--EGKVVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>ATG21_SCHPO (Q9P6N1) Autophagy-related protein 21| Length = 335 Score = 37.0 bits (84), Expect = 0.054 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGL--SSISLVRWSPSGDYFLT 582 V + + P G +A+AS G + S+G L T +RRG +SI + + P + Sbjct: 170 VQVVDFHPRGHLIATASAKGTVIRVITTSDGELVTELRRGYIPASIVSISFHPVEPFLAC 229 Query: 583 AKFDGTFHLWETNTWTSEPWSS 648 A +GT H+++ + S+P SS Sbjct: 230 ASENGTIHVFKISKQPSDPNSS 251
>GRWD1_RAT (Q5XI13) Glutamate-rich WD repeat-containing protein 1| Length = 445 Score = 37.0 bits (84), Expect = 0.054 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 6/153 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H E A++W P G+++ C+ I LW+ + G S+ R G Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGG------------SWNVDQRPFVGH 259 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLG-----TPIRRGLS 534 T V L W P + ++ S IWD+ G T Sbjct: 260 -----------TRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDG 308 Query: 535 SISLVRWSPSGDYFLTAKFDGTFHLWETNTWTS 633 ++++ WS + L+ DGT +W+ + S Sbjct: 309 DVNVISWSRREPFLLSGGDDGTLKVWDLRQFKS 341
>LIS1_DROME (Q7KNS3) Lissencephaly-1 homolog (Lissencephaly1) (Dlis1) (DLis-1)| Length = 411 Score = 36.6 bits (83), Expect = 0.071 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGT--PIRRGLSSISLVRWSPSGDYF 576 T+ V + + G+ LAS S + S +WD + + ++S V + P+GDY Sbjct: 150 TDSVQDVAFDAQGKLLASCSAD-LSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208 Query: 577 LTAKFDGTFHLWETNT 624 L+A D T +WE T Sbjct: 209 LSASRDRTIKMWEVAT 224 Score = 34.7 bits (78), Expect = 0.27 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAK 588 VS++ + P G Y+ SAS ++ +W+V+ G G + +VR G F T Sbjct: 196 VSSVAFVPAGDYVLSAS-RDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCS 254 Query: 589 FDGTFHLWETNT 624 D T +W TN+ Sbjct: 255 NDQTIRVWLTNS 266 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +1 Query: 439 GRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWE 615 G +LAS S ++ IWDVS GL G + + + + P G Y ++A D T +W+ Sbjct: 309 GPFLASGS-RDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
>WDR1_CHICK (O93277) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 609 Score = 36.6 bits (83), Expect = 0.071 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS----ISLVRWSPSGD 570 T V+ + + PDG A+AS +GQ F I+D G G + I + WSP Sbjct: 191 TRFVNCVRFSPDGNRFATASADGQIF-IYDGKTGEKVCALGGGKAHDGGIYAISWSPDSS 249 Query: 571 YFLTAKFDGTFHLWE 615 L+A D T +W+ Sbjct: 250 QLLSASGDKTAKIWD 264
>A16L1_PONPY (Q5RAC9) Autophagy-related protein 16-1 (APG16-like 1)| Length = 607 Score = 36.6 bits (83), Expect = 0.071 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPI--RRGLSSISLVRWSPSG 567 + PDG Y+A+ S G +T W V G + ++ SSI+ V WSPSG Sbjct: 542 FSPDGSYVAAGSAEGSLYT-WSVLTGKVEKVLSKQHSSSINAVAWSPSG 589
>GBLP_BRARE (O42248) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 36.2 bits (82), Expect = 0.092 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 27/173 (15%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGC---------KGGICLWSASYPGNVASVKSGVTSSSFGA 345 H + V + + PNS I V C C ++ G+ + + VT S G+ Sbjct: 147 HTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT-VTVSPDGS 205 Query: 346 F--PRGSTGQWILVDVLRG------SSTELVSALCWKPDGRYLASASCNGQSFTIWDV-- 495 G GQ +L D+ G + ++ALC+ P+ +L +A+ G S IWD+ Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALCFSPNRYWLCAAT--GPSIKIWDLEG 263 Query: 496 --------SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWT 630 + + T + + + WS G D +W+ T Sbjct: 264 KIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGT 316
>TUP11_SCHPO (Q09715) Transcriptional repressor tup11| Length = 614 Score = 36.2 bits (82), Expect = 0.092 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 3/104 (2%) Frame = +1 Query: 361 TGQWIL-VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 TGQ IL +++ G V+A+ P+ +++A S + Q +W VS L + S Sbjct: 433 TGQCILKLEIENG-----VTAIAISPNDQFIAVGSLD-QIIRVWSVSGTLVERLEGHKES 486 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSS--SNGIC 663 + + +SP L+ D T +WE S S+ GIC Sbjct: 487 VYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGIC 530
>A16L1_MOUSE (Q8C0J2) Autophagy-related protein 16-1 (APG16-like 1)| Length = 607 Score = 36.2 bits (82), Expect = 0.092 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPI--RRGLSSISLVRWSPSGDYFLTAKFDGT 600 + PDG Y+A+ S G S +W V G + ++ SSI+ V W+PSG + ++ Sbjct: 542 FSPDGSYVAAGSAEG-SLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSR 600 Query: 601 FHLW 612 LW Sbjct: 601 AVLW 604
>SLP1_SCHPO (P78972) WD-repeat-containing protein slp1| Length = 488 Score = 36.2 bits (82), Expect = 0.092 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 25/131 (19%) Frame = +1 Query: 187 SEHQKEVKAIEWRPNSGKMIAVGCKGG-----ICLWSASYPGNVASVKSG--VTS----- 330 + H VKA+ W P ++A G GG I W+A+ V +V +G VTS Sbjct: 343 TNHNAAVKAVAWCPWQSNLLATG--GGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP 400 Query: 331 -----SSFGAFPRGSTGQWIL--------VDVLRGSSTELVSALCWKPDGRYLASASCNG 471 S FP + W VD+ + L SAL PDGR L++A+ + Sbjct: 401 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSAL--SPDGRILSTAA-SD 457 Query: 472 QSFTIWDVSEG 504 ++ W V +G Sbjct: 458 ENLKFWRVYDG 468
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 35.8 bits (81), Expect = 0.12 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 9/146 (6%) Frame = +1 Query: 202 EVKAIEWRPNSGKM-IAVGCKGGICLWSASYP-----GNVASVKSGVTSSSFGA---FPR 354 +V ++W P S + +A G + L++ S+P + +K G + + A PR Sbjct: 197 KVTYLKWLPESESLFLASHASGHLYLYNVSHPCTSTPPQYSLLKQGEGFAVYAAKSKAPR 256 Query: 355 GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS 534 +W + + G E + PDGR+LA S +G S L ++ Sbjct: 257 NPLAKWAVGE---GPLNEFA----FSPDGRHLACVSQDGCLRVFHFDSMLLRGLMKSYFG 309 Query: 535 SISLVRWSPSGDYFLTAKFDGTFHLW 612 + V WSP G Y +T D +W Sbjct: 310 GLLCVCWSPDGRYVVTGGEDDLVTVW 335 Score = 30.8 bits (68), Expect = 3.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 421 LCWKPDGRYLASASCNGQSFTIWDVSEG 504 +CW PDGRY+ + T+W +EG Sbjct: 314 VCWSPDGRYVVTGG-EDDLVTVWSFTEG 340
>TUP1_CANAL (P56093) Transcriptional repressor TUP1| Length = 514 Score = 35.8 bits (81), Expect = 0.12 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG---LGTPIRRGLSSISL 546 ++ +LRG ++ S L + PDG L S S +S IWD+ L I G++++++ Sbjct: 291 IIKILRGHEQDIYS-LDFFPDGDRLVSGS-GDRSVRIWDLRTSQCSLTLSIEDGVTTVAV 348 Query: 547 VRWSPSGDYFLTAKFDGTFHLWETNT 624 SP G D T +W++ T Sbjct: 349 ---SPDGKLIAAGSLDRTVRVWDSTT 371
>GBB_ORYSA (Q40687) Guanine nucleotide-binding protein beta subunit| Length = 380 Score = 35.8 bits (81), Expect = 0.12 Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 29/176 (16%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------------------SYPG 297 C H +V +++W P +++ G + +W+A ++ Sbjct: 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAP 118 Query: 298 NVASVKSGVTSSSFGAFPRGSTGQW---ILVDVLRGSSTELVSALCWKPDGRYLASASCN 468 N SV G S+ F S I V + VS+ + PD S Sbjct: 119 NGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSSG 178 Query: 469 GQSFTIWDVSEGLGTPIRRG-------LSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 Q+ +WDV+ G I G +SL S + + F++ D T LW+ Sbjct: 179 DQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWD 234 Score = 30.0 bits (66), Expect = 6.6 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 6/163 (3%) Frame = +1 Query: 154 DSDGKESCS-LTSEHQKEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVT 327 D DG S + + H+ V + ++ P+ + C LW V +G Sbjct: 142 DRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWD---------VTTGQR 192 Query: 328 SSSFGA-FPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV--- 495 S FG FP G T + + + +S VS C + +WD+ Sbjct: 193 ISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSC--------------DATVRLWDIRIA 238 Query: 496 SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 S + T I+ V++ P G F T DGT L++ T Sbjct: 239 SRAVRT-YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDVRT 280
>WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat protein) (spWD)| Length = 367 Score = 35.8 bits (81), Expect = 0.12 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVR---WSPSGDYFL 579 +V+ L PD L + S S +WDV G G + R S +LV W PS Y + Sbjct: 148 VVTGLAVSPDSSQLCTGS-RDNSLLLWDV--GTGQCVERASVSRNLVTHLCWVPSEPYIV 204 Query: 580 TAKFDGTFHLWET 618 D T LW++ Sbjct: 205 QTSEDKTIRLWDS 217
>RBBP7_BRARE (Q7ZTY4) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 426 Score = 35.4 bits (80), Expect = 0.16 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 6/147 (4%) Frame = +1 Query: 193 HQKEVKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 HQKE + W PN SG +++ ICLW S + K G + F TG Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-----GAPKEGKIVDAKTIF----TGH 226 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSS 537 T +V + W L + + Q IWD S P + + Sbjct: 227 -----------TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275 Query: 538 ISLVRWSPSGDYFL-TAKFDGTFHLWE 615 ++ + ++P ++ L T D T LW+ Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWD 302
>PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-like protein| Length = 554 Score = 35.4 bits (80), Expect = 0.16 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 406 ELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTA 585 E + + + P LA+AS + ++ +W L L ++ V + PSG Y T Sbjct: 299 ERATDVVFSPVDDCLATASAD-RTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTT 357 Query: 586 KFDGTFHLWETNT 624 +D T+ LW+ NT Sbjct: 358 SYDKTWRLWDINT 370
>CDT2_SCHPO (Q10990) Cell division cycle protein cdt2| Length = 490 Score = 35.4 bits (80), Expect = 0.16 Identities = 16/56 (28%), Positives = 32/56 (57%) Frame = +1 Query: 172 SCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSF 339 S LT H K+V A++W + G++ ++ G + +W++S G+ A+++ S F Sbjct: 429 SAMLTGGHTKDVTAVDW-SSEGQLASISDDGSVRVWNSSLHGSAANLREKNFSEIF 483
>DLG1_HUMAN (Q12959) Disks large homolog 1 (Synapse-associated protein 97)| (SAP-97) (hDlg) Length = 904 Score = 35.4 bits (80), Expect = 0.16 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 9/111 (8%) Frame = -1 Query: 539 MLLNPRRIGVPNPSETSQIVNDWPLQEAEAKYLPSGFQQSALTSSVEEPRRTSTRIH*PV 360 +L NP+ I PSE Q VN W + + + S S+L+ SVE+ R P Sbjct: 60 LLDNPKCIDRSKPSEPIQPVNTWEISSLPSSTVTSETLPSSLSPSVEKYRYQDEDTP-PQ 118 Query: 359 EPLGKAPKEEEVTPDFTDAT---------LPGYDADQRHIPPLQPTAIIFP 234 E + E + P+ + + G+ HI P++PT + P Sbjct: 119 EHISPQITNEVIGPELVHVSEKNLSEIENVHGF-VSHSHISPIKPTEAVLP 168
>YNH9_SCHPO (Q96WW0) Hypothetical WD-repeat protein C32H8.09 in chromosome II| Length = 483 Score = 35.4 bits (80), Expect = 0.16 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%) Frame = +1 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCN-------GQSFTIWDVSEGLGTPIRRGLSS 537 V +L + V L WKP+ L + C+ + F + V I+ Sbjct: 46 VFLLNAQFIQKVVYLLWKPN---LGAEKCHQICVASVDKVFVLDIVQHDYYASIQCDQDP 102 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 +S + WSPSG+ L + FD +W NT Sbjct: 103 LSSISWSPSGELLLWSSFDSKITVWSLNT 131
>WDR7_RAT (Q9ERH3) WD-repeat protein 7 (TGF-beta resistance-associated| protein TRAG) Length = 1488 Score = 35.4 bits (80), Expect = 0.16 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 97 KHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC-KGGIC 273 +HC+ V+ V + + K+ L S H ++ I+WRP S + VGC G +C Sbjct: 530 QHCVCSVASDHSVGLLSLRE---KKCIMLASRHLFPIQVIKWRP-SDDYLVVGCTDGSVC 585 Query: 274 LW 279 +W Sbjct: 586 VW 587 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 R L I +++W PS DY + DG+ +W+ +T Sbjct: 558 RHLFPIQVIKWRPSDDYLVVGCTDGSVCVWQMDT 591
>SWD3_YEAST (P38123) COMPASS component SWD3 (Complex proteins associated with| SET1 protein SWD3) (Set1C component SWD3) Length = 315 Score = 35.4 bits (80), Expect = 0.16 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = +1 Query: 415 SALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFD 594 S LCW PDG+ +A+AS + S I +S GL + + + ++ G+ T+ D Sbjct: 59 SELCWSPDGQCIATAS-DDFSVEIIHLSYGLLHTFIGHTAPVISLTFNRKGNLLFTSSMD 117 Query: 595 GTFHLWET 618 + +W+T Sbjct: 118 ESIKIWDT 125
>WDHD1_MOUSE (P59328) WD repeat and HMG-box DNA-binding protein 1 (Acidic| nucleoplasmic DNA-binding protein 1) (And-1) Length = 1117 Score = 35.4 bits (80), Expect = 0.16 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 16/109 (14%) Frame = +1 Query: 376 LVDVLRGSSTEL-------VSALCWKPDGRYLASASCNGQSFTIWDVSE---GLGTPIRR 525 +VDV+ S + V +L + P +LASASC+G + +W++S+ + P+ + Sbjct: 120 VVDVMDNSQQQTFRGHDAPVLSLSFDPKDIFLASASCDG-TVRVWNISDQTCAVSWPVLQ 178 Query: 526 ------GLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSSSN 654 SI + W P L + + L+ TW S P+ S+ Sbjct: 179 KSNDVVNAKSICRLAWQPKAGKLLAVPVEKSVKLYRRETW-SNPFDLSD 226 Score = 29.6 bits (65), Expect = 8.7 Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 4/148 (2%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 H V ++ + P + + C G + +W+ S +V V S Sbjct: 135 HDAPVLSLSFDPKDIFLASASCDGTVRVWNIS--DQTCAVSWPVLQKSN----------- 181 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSIS--- 543 DV+ S + L W+P L + +S ++ E P SSIS Sbjct: 182 ---DVVNAKS---ICRLAWQPKAGKLLAVPVE-KSVKLYR-RETWSNPFDLSDSSISQTL 233 Query: 544 -LVRWSPSGDYFLTAKFDGTFHLWETNT 624 +V WSP G Y +G +W T Sbjct: 234 NIVTWSPCGQYLAAGAINGLIVVWNVET 261
>GRWD1_MOUSE (Q810D6) Glutamate-rich WD repeat-containing protein 1 (Protein| A301) Length = 446 Score = 35.0 bits (79), Expect = 0.21 Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 6/153 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H E A++W P G+++ C+ + LW+ + G S+ R G Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGG------------SWNVDQRPFVGH 260 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLG-----TPIRRGLS 534 T V L W P + ++ S IWD+ G T Sbjct: 261 -----------TRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDG 309 Query: 535 SISLVRWSPSGDYFLTAKFDGTFHLWETNTWTS 633 ++++ WS + L+ DG +W+ + S Sbjct: 310 DVNVISWSRREPFLLSGGDDGALKVWDLRQFKS 342
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 35.0 bits (79), Expect = 0.21 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +1 Query: 397 SSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDY 573 S T+ V L + PDG++LASA+ + + +WD++ G G S +++V + PS Sbjct: 144 SHTQAVRCLRFSPDGKWLASAA-DDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYL 202 Query: 574 FLTAKFDGTFHLWE 615 + D T W+ Sbjct: 203 LASGSSDRTIRFWD 216
>WDR7_MOUSE (Q920I9) WD-repeat protein 7 (TGF-beta resistance-associated| protein TRAG) Length = 1489 Score = 35.0 bits (79), Expect = 0.21 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +1 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 R L I +++W PS DY + DG+ ++W+ +T Sbjct: 558 RHLFPIQVIKWRPSDDYLVVGSTDGSVYVWQMDT 591 Score = 34.3 bits (77), Expect = 0.35 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Frame = +1 Query: 229 NSGKMIAVGCKGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSST 405 + G I GC G ICLW S ++ + FG +S Sbjct: 29 DDGGTIVTGCHDGQICLWDVS-----VELEVNPRALLFG----------------HTASI 67 Query: 406 ELVSALCWKPDGRYLASASCNGQSFTIWDVSEG 504 +S C D RY SAS NG+ +WDV++G Sbjct: 68 TCLSKACASGDKRYTVSASANGE-MCLWDVNDG 99 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/61 (22%), Positives = 28/61 (45%) Frame = +1 Query: 97 KHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICL 276 +HC+ V+ V + + K+ L S H ++ I+WRP+ ++ G + + Sbjct: 530 QHCICSVASDHSVGLLSLRE---KKCIMLASRHLFPIQVIKWRPSDDYLVVGSTDGSVYV 586 Query: 277 W 279 W Sbjct: 587 W 587
>PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog| Length = 910 Score = 34.7 bits (78), Expect = 0.27 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 21/101 (20%) Frame = +1 Query: 361 TGQWILVDVLRGSSTELV--------------------SALCWKPDGRYLASASCNGQSF 480 TG W+ + +GS+ +LV + + PDG +A+ + +G+ Sbjct: 326 TGDWLAIGCGKGSTAQLVVWEWQSESYVMKQQAHSLRITTAEYSPDGSLMATGAEDGK-V 384 Query: 481 TIWDVSEGLGT-PIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 IW+ T S ++ V+W+ SG L+A DGT Sbjct: 385 KIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASLDGT 425
>CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chromatin assembly| factor 1 p55 subunit) (CAF-1 p55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF-55) Length = 430 Score = 34.7 bits (78), Expect = 0.27 Identities = 47/231 (20%), Positives = 87/231 (37%), Gaps = 42/231 (18%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHC-LAFVSGKDQVTVHDFEDSDGKESCSLTSE-------HQKE 204 K+ E + + + P C +A + V V D+ K S + HQKE Sbjct: 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE 183 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSAS--------------YPGNVASVKSG----VT 327 + W PN +G +++ ICLW + + G+ A V+ + Sbjct: 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH 243 Query: 328 SSSFGAFPRGSTGQWILVDVLRGSSTEL-----------VSALCWKPDGRYLASASCNGQ 474 S FG+ + Q +++ R ++T V+ L + P ++ + + Sbjct: 244 ESLFGSV---ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 300 Query: 475 SFTIWDVSEGLGTPIRRGLS---SISLVRWSPSGDYFLTAK-FDGTFHLWE 615 + +WD+ L + S I V+WSP + L + D H+W+ Sbjct: 301 TVALWDL-RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350
>SRW1_SCHPO (O13286) WD-repeat-containing protein srw1 (Suppressor of rad/wee1)| Length = 556 Score = 34.7 bits (78), Expect = 0.27 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 24/203 (11%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 +SWN H + G+D +H + LT+ H++EV +EW N + + G Sbjct: 339 LSWNDH---VLSSGGRDNHILHRDVRAPEHYFRVLTA-HRQEVCGLEWNSNENLLASGGN 394 Query: 259 KGGICLWSA-------SYPGNVASVKS--------GVTSSSFGAFPRGSTGQWILVDVLR 393 + +W S+ ++A+VK+ G+ +S G R L + R Sbjct: 395 DNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIK----LWNTQR 450 Query: 394 GS-------STELVSALCWKPDGRYLASASCNGQSFTIWDVS--EGLGTPIRRGLSSISL 546 GS +++ + L K ++++ +W+ +GT ++ + Sbjct: 451 GSMLHNIDTGSQVCNLLWSKQTNEFISTHGFMENEVALWNYPSVSRVGT-LKGHTDRVLY 509 Query: 547 VRWSPSGDYFLTAKFDGTFHLWE 615 + SP+G+ +T D T W+ Sbjct: 510 LAMSPNGENIVTGAADETLRFWK 532
>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) (Protein 59) (Fragment) Length = 553 Score = 34.7 bits (78), Expect = 0.27 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 9/146 (6%) Frame = +1 Query: 202 EVKAIEWRPNSGKM-IAVGCKGGICLWSASYPGNVAS-----VKSGVTSSSFGA---FPR 354 +V ++W P S + +A G + L++ S+P A +K G S + A PR Sbjct: 93 KVTYLKWLPESESLFLASHASGHLYLYNVSHPCASAPPQYSLLKQGEGFSVYAAKSKAPR 152 Query: 355 GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS 534 +W + + G E + PDGR+LA S + S L ++ Sbjct: 153 NPLAKWAVGE---GPLNEFA----FSPDGRHLACVSQDACLRVFHFDSMLLRGLMKSYFG 205 Query: 535 SISLVRWSPSGDYFLTAKFDGTFHLW 612 + V WSP G Y +T D +W Sbjct: 206 GLLCVCWSPDGRYVVTGGEDDLVTVW 231 Score = 30.8 bits (68), Expect = 3.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 421 LCWKPDGRYLASASCNGQSFTIWDVSEG 504 +CW PDGRY+ + T+W +EG Sbjct: 210 VCWSPDGRYVVTGG-EDDLVTVWSFTEG 236
>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1| Length = 446 Score = 34.7 bits (78), Expect = 0.27 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 6/153 (3%) Frame = +1 Query: 193 HQKEVKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H E A++W P +G+++ C+ I LW+ + G Sbjct: 213 HMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPT-----------------------DGGS 249 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-----LGTPIRRGLS 534 W + T V L W P + ++ S IWD+ + T Sbjct: 250 WHVDQRPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDG 309 Query: 535 SISLVRWSPSGDYFLTAKFDGTFHLWETNTWTS 633 ++++ WS + L+ DG +W+ + S Sbjct: 310 DVNVISWSRREPFLLSGGDDGALKIWDLRQFKS 342
>PRP4_MOUSE (Q9DAW6) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 34.7 bits (78), Expect = 0.27 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 10/149 (6%) Frame = +1 Query: 199 KEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWI 375 + + + PNS KM+A C G+C LWS Sbjct: 231 RPISYCHFSPNS-KMLATACWSGLCKLWSVP--------------------------DCS 263 Query: 376 LVDVLRGSSTELVSALCWKPDGRY--------LASASCNGQSFTIWDV-SEGLGTPIRRG 528 L+ LRG +T V A+ + P LAS + +G S +W + S+ I Sbjct: 264 LLHTLRGHNTN-VGAIVFHPKSTVSLDQKDVNLASCAADG-SVKLWSLDSDEPVADIEGH 321 Query: 529 LSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 ++ V W PSG + T +D ++ LW+ Sbjct: 322 TVRVARVMWHPSGRFLGTTCYDRSWRLWD 350 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Frame = +1 Query: 361 TGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG---LGTPIRRGL 531 TG+ I+ L G E+ + + P+G ++A+ S + +WD+ + P + L Sbjct: 395 TGRCIMF--LEGHLKEIYG-INFSPNGYHIATGS-GDNTCKVWDLRQRRCVYTIPAHQNL 450 Query: 532 SSISLVRWSP-SGDYFLTAKFDGTFHLWETNTWT 630 ++ V++ P GD+ LT +D T +W W+ Sbjct: 451 --VTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWS 482
>GBLP_LEIMA (Q25306) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 34.3 bits (77), Expect = 0.35 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 2/147 (1%) Frame = +1 Query: 190 EHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 +H K+V A+ + P+ +++ G I +W NVA Sbjct: 105 KHTKDVLAVAFSPDDRLIVSAGRDNVIRVW------NVAGE------------------- 139 Query: 370 WILVDVLRGSSTELVSALCWKPDGRY-LASASCNGQSFTIWDVSEGLGTPIRRGLSS-IS 543 + + LR + VS++C+ P + + + + +W+V+ G +G S+ +S Sbjct: 140 -CMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVS 198 Query: 544 LVRWSPSGDYFLTAKFDGTFHLWETNT 624 V SP G + DG LW+ +T Sbjct: 199 TVTVSPDGSLCASGGKDGAALLWDLST 225
>GBLP_LEIIN (P62884) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) (LiP36) (p36Li) Length = 312 Score = 34.3 bits (77), Expect = 0.35 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 2/147 (1%) Frame = +1 Query: 190 EHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 +H K+V A+ + P+ +++ G I +W NVA Sbjct: 105 KHTKDVLAVAFSPDDRLIVSAGRDNVIRVW------NVAGE------------------- 139 Query: 370 WILVDVLRGSSTELVSALCWKPDGRY-LASASCNGQSFTIWDVSEGLGTPIRRGLSS-IS 543 + + LR + VS++C+ P + + + + +W+V+ G +G S+ +S Sbjct: 140 -CMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVS 198 Query: 544 LVRWSPSGDYFLTAKFDGTFHLWETNT 624 V SP G + DG LW+ +T Sbjct: 199 TVTVSPDGSLCASGGKDGAALLWDLST 225
>GBLP_LEICH (P62883) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 34.3 bits (77), Expect = 0.35 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 2/147 (1%) Frame = +1 Query: 190 EHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 +H K+V A+ + P+ +++ G I +W NVA Sbjct: 105 KHTKDVLAVAFSPDDRLIVSAGRDNVIRVW------NVAGE------------------- 139 Query: 370 WILVDVLRGSSTELVSALCWKPDGRY-LASASCNGQSFTIWDVSEGLGTPIRRGLSS-IS 543 + + LR + VS++C+ P + + + + +W+V+ G +G S+ +S Sbjct: 140 -CMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVS 198 Query: 544 LVRWSPSGDYFLTAKFDGTFHLWETNT 624 V SP G + DG LW+ +T Sbjct: 199 TVTVSPDGSLCASGGKDGAALLWDLST 225
>PRP4_HUMAN (O43172) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) (hPrp4) Length = 522 Score = 34.3 bits (77), Expect = 0.35 Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 9/148 (6%) Frame = +1 Query: 199 KEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWI 375 + + + PNS KM+A C G+C LWS Sbjct: 232 RPISYCHFSPNS-KMLATACWSGLCKLWSVP--------------------------DCN 264 Query: 376 LVDVLRGSSTEL-------VSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGL 531 L+ LRG +T + S + P LAS + +G S +W + S+ I Sbjct: 265 LLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADG-SVKLWSLDSDEPVADIEGHT 323 Query: 532 SSISLVRWSPSGDYFLTAKFDGTFHLWE 615 ++ V W PSG + T +D ++ LW+ Sbjct: 324 VRVARVMWHPSGRFLGTTCYDRSWRLWD 351
>ATG16_XENTR (Q5I0B9) Autophagy-related protein 16 (APG16-like 1)| Length = 537 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPI--RRGLSSISLVRWSPSGDYFLTAKFDGT 600 + PDG Y+++ S G + W+V G + ++ SSI+ V WSPSG + ++ Sbjct: 472 FSPDGSYVSAGSAEGTLY-FWNVLTGKVERMFSKQHSSSINAVAWSPSGTHVVSVDKGSR 530 Query: 601 FHLW 612 LW Sbjct: 531 GVLW 534
>WDR1_CAEEL (Q11176) Actin-interacting protein 1 (AIP1) (Uncoordinated protein| 78) Length = 611 Score = 34.3 bits (77), Expect = 0.35 Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 22/188 (11%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGK---ESCSLTS-EHQKEVKAIEWRPNSGKMI 246 V +NP A G + +++ D E SL + H V + W P+ K+ Sbjct: 196 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA 255 Query: 247 AVGCKGGICLWSAS----------------YPGNVASVKSGVTSSSFGAFPRGSTGQWIL 378 + I +W+ + + K + S S F + Sbjct: 256 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS 315 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGL--SSISLVR 552 +D +R + ++AL DG+ L SA G WD+S G+ + + + I+ ++ Sbjct: 316 IDQVRYGHNKAITALSSSADGKTLFSADAEGH-INSWDISTGISNRVFPDVHATMITGIK 374 Query: 553 WSPSGDYF 576 + GD F Sbjct: 375 TTSKGDLF 382 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Frame = +1 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS--------SISLV 549 G T+ V ++ + PDG AS +G + +++ +G T + S S+ + Sbjct: 187 GEHTKFVHSVRYNPDGSLFASTGGDG-TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGL 245 Query: 550 RWSPSGDYFLTAKFDGTFHLWETNT 624 WSP G +A D T +W T Sbjct: 246 TWSPDGTKIASASADKTIKIWNVAT 270
>MSI1_ARATH (O22467) WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF| IRA 1) (Protein medicis) Length = 424 Score = 34.3 bits (77), Expect = 0.35 Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 45/244 (18%) Frame = +1 Query: 19 KQMLFPSCNPKLLEEFDTKK---VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTS 189 K L +CNP L + + +SW+ K +SG D + ++ + ++ SL + Sbjct: 161 KPPLDGACNPDLKLRGHSSEGYGLSWSKFKQG-HLLSGSDDAQICLWDINATPKNKSLDA 219 Query: 190 E-----HQKEVKAIEWRPNSGKMI-AVGCKGGICLWSASYPGNVASVKSGVTSS------ 333 + H+ V+ + W + +VG + +W P V+S V S Sbjct: 220 QQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCL 279 Query: 334 SFGAFPR-----GSTGQWILVDVLRGSSTEL---------VSALCWKPDGRYLASASCNG 471 +F F GST + + + LR ST L V + W P + ++ C G Sbjct: 280 AFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLG 339 Query: 472 QSFTIWDVSE----------GLGTP----IRRG-LSSISLVRWSPSGDYFLTA-KFDGTF 603 + +WD+S G P I G S IS W+P D+ +++ D Sbjct: 340 RRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNIL 399 Query: 604 HLWE 615 +W+ Sbjct: 400 QIWQ 403 Score = 32.0 bits (71), Expect = 1.7 Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 9/145 (6%) Frame = +1 Query: 100 HCLAF--------VSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVG 255 +CLAF +G TV F+ + H++EV + W P + ++A Sbjct: 277 NCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASC 336 Query: 256 CKGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWK 432 C G + +W S +V+ F + G T +S W Sbjct: 337 CLGRRLMVWDLSRIDEEQTVEDAEDGPPELLF-------------IHGGHTSKISDFSWN 383 Query: 433 PDGRYLASASCNGQSFTIWDVSEGL 507 P ++ S+ IW ++E + Sbjct: 384 PCEDWVISSVAEDNILQIWQMAENI 408
>APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1249 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +1 Query: 445 YLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 +LA + + +W++ + RG LS + V +SP G FLTA D T +WET Sbjct: 853 HLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911
>YA98_SCHPO (Q09786) Hypothetical WD-repeat protein C13G6.08 in chromosome I| Length = 535 Score = 34.3 bits (77), Expect = 0.35 Identities = 17/69 (24%), Positives = 28/69 (40%) Frame = +1 Query: 415 SALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFD 594 S L W P G + ++ +W G + + +S V +S +GD + D Sbjct: 195 SLLSWSPKGDLAIGLA---ENIYLWSKELGPTRVLEESIYDVSSVAYSYNGDILAVGRVD 251 Query: 595 GTFHLWETN 621 GT W+ N Sbjct: 252 GTLQFWQDN 260
>SIF2_YEAST (P38262) SIR4-interacting protein SIF2| Length = 535 Score = 34.3 bits (77), Expect = 0.35 Identities = 18/79 (22%), Positives = 35/79 (44%) Frame = +1 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDY 573 G +T V+ L W DG + + NG+ +W+ + L + + I V+W+ G + Sbjct: 217 GKTTNQVTCLAWSHDGNSIVTGVENGE-LRLWNKTGALLNVLNFHRAPIVSVKWNKDGTH 275 Query: 574 FLTAKFDGTFHLWETNTWT 630 ++ + LW + T Sbjct: 276 IISMDVENVTILWNVISGT 294
>PRP4_PONPY (Q5NVD0) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 34.3 bits (77), Expect = 0.35 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 10/149 (6%) Frame = +1 Query: 199 KEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWI 375 + + + PNS KM+A C G+C LWS Sbjct: 231 RPISYCHFSPNS-KMLATACWSGLCKLWSVP--------------------------DCN 263 Query: 376 LVDVLRGSSTELVSALCWKPDGRY--------LASASCNGQSFTIWDV-SEGLGTPIRRG 528 L+ LRG +T V A+ + P LAS + +G S +W + S+ I Sbjct: 264 LLHTLRGHNTN-VGAIVFHPKSTVSLDQKDVNLASCAADG-SVKLWSLDSDEPVADIEGH 321 Query: 529 LSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 ++ V W PSG + T +D ++ LW+ Sbjct: 322 TVRVARVMWHPSGRFLGTTCYDRSWRLWD 350
>GBB_MAIZE (P49178) Guanine nucleotide-binding protein beta subunit| Length = 380 Score = 34.3 bits (77), Expect = 0.35 Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 32/179 (17%) Frame = +1 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA-------------------SYPG 297 C H +V +++W P +++ G + +W+A ++ Sbjct: 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMACAFAP 118 Query: 298 NVASVKSGVTSSSFGAFPRGS----TGQWILVDVLRGSSTELVSALCWKPDGRYLASASC 465 N SV G S+ F S G + +L G VS+ + PD S Sbjct: 119 NGQSVACGGLDSACSIFNLNSQADRDGNMPVSRILTGHK-GYVSSCQYVPDQETRLITSS 177 Query: 466 NGQSFTIWDVSEGLGTPIRRG---------LSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 Q+ +WDV+ G I G + S+S+ S + + F++ D T LW+ Sbjct: 178 GDQTCVLWDVTTGQRISIFGGEFPSGHTADVQSVSIN--SSNTNMFVSGSCDTTVRLWD 234
>WDHD1_HUMAN (O75717) WD repeat and HMG-box DNA-binding protein 1 (Acidic| nucleoplasmic DNA-binding protein 1) (And-1) Length = 1129 Score = 34.3 bits (77), Expect = 0.35 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 16/111 (14%) Frame = +1 Query: 376 LVDVLRGSSTEL-------VSALCWKPDGRYLASASCNGQSFTIWDVSE---GLGTPIRR 525 +VDV+ S + V +L + P +LASASC+G S +W +S+ + P+ + Sbjct: 120 IVDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDG-SVRVWQISDQTCAISWPLLQ 178 Query: 526 ------GLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSSSNGI 660 SI + W P L + + L+ +W+ + S N I Sbjct: 179 KCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFI 229
>HSV2_PICAN (Q5QA93) SVP1-like protein 2| Length = 360 Score = 33.9 bits (76), Expect = 0.46 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 14/120 (11%) Frame = +1 Query: 331 SSFGAFPRGSTGQWILVDV-----------LRGSSTELVSALCWKPDGRYLASASCNGQS 477 +SF AFP + GQ LVDV + + + L G +ASAS G Sbjct: 158 TSFLAFPGRAIGQIQLVDVSPAHRDRNLISIIKAHKSRIQCLAISNSGLLIASASQTGTI 217 Query: 478 FTIWDVSE-GLGTPIRRGL--SSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSS 648 I D ++ L +RRGL ++++ +++SP T H++ +P S+ Sbjct: 218 IRIHDTAKCSLRFELRRGLDRATVTSIKFSPDDSKLAVLSDKNTLHVYNLTAADPQPESA 277
>GBLP_MEDSA (O24076) Guanine nucleotide-binding protein beta subunit-like| protein Length = 325 Score = 33.9 bits (76), Expect = 0.46 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Frame = +1 Query: 385 VLRGSS---TELVSALCWKPDGRYLASASCNGQSFTIWDVSEG---LGTPIRRGLSSISL 546 VLRG+ T++V+A+ D + + +S +W +++ G P RR Sbjct: 6 VLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHF 65 Query: 547 VR---WSPSGDYFLTAKFDGTFHLWETNTWTS 633 V+ S G + L+ +DG LW+ N TS Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLNAGTS 97
>LIN53_CAEEL (P90916) Probable histone-binding protein lin-53 (Abnormal cell| lineage protein 53) Length = 417 Score = 33.9 bits (76), Expect = 0.46 Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 26/179 (14%) Frame = +1 Query: 43 NPKLLEEFDTKK---VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSE-----HQ 198 NP + + TK+ +SWNP+K L + DQ H +++ + L ++ H+ Sbjct: 163 NPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHE 222 Query: 199 KEVKAIEWRP-NSGKMIAVGCKGGICLWS--ASYPGNVASVKSG-VTSSSFGAFPR---- 354 V+ + W + G +VG + +W S PG+ S V +F + Sbjct: 223 SVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILA 282 Query: 355 -GSTGQWILVDVLRG---------SSTELVSALCWKPDGRYLASASCNGQSFTIWDVSE 501 GS + + + LR S + + + W P + ++S + +WD+S+ Sbjct: 283 TGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSK 341
>Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409| Length = 326 Score = 33.9 bits (76), Expect = 0.46 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKF 591 ++ + + PDG++L +A+ +G T+W + ++ + R SP +T + Sbjct: 52 INRIHFSPDGQFLLTAAADGVG-TLWTKEGEMLGQLQGQKPPMFNARLSPDRQILITTGY 110 Query: 592 DGTFHLW 612 DGT LW Sbjct: 111 DGTIRLW 117 Score = 33.5 bits (75), Expect = 0.60 Identities = 20/64 (31%), Positives = 34/64 (53%) Frame = +1 Query: 421 LCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 L + P G +AS S +G S + + + + I G I+ V +SP+G+ LT+ +G+ Sbjct: 177 LAYHPQGLLIASVSDSG-SLHLINPNGKIEREISTGQGRINNVNFSPNGEQLLTSGINGS 235 Query: 601 FHLW 612 LW Sbjct: 236 AKLW 239
>WDR7_HUMAN (Q9Y4E6) WD-repeat protein 7 (TGF-beta resistance-associated| protein TRAG) (Rabconnectin-3 beta) Length = 1490 Score = 33.9 bits (76), Expect = 0.46 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +1 Query: 523 RGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 R L I +++W PS DY + DG+ ++W+ +T Sbjct: 558 RHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDT 591 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +1 Query: 97 KHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK-GGIC 273 +HC+ V+ V + + K+ L S H ++ I+WRP S + VGC G + Sbjct: 530 QHCICSVASDHSVGLLSLRE---KKCIMLASRHLFPIQVIKWRP-SDDYLVVGCSDGSVY 585 Query: 274 LW 279 +W Sbjct: 586 VW 587 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSP 561 ++A+ + PDGRYLA+ S + W ++ L L SI ++ +P Sbjct: 1397 ITAVAFAPDGRYLATYSNTDSHISFWQMNTSL-------LGSIGMLNSAP 1439
>WD51B_PONPY (Q5RD06) WD-repeat protein 51B| Length = 451 Score = 33.5 bits (75), Expect = 0.60 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 18/177 (10%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS-------YPGN---VASVKSGVTSSSFG 342 H+ + +++ PN ++ + LW+ Y G+ V SV+ + Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLA 76 Query: 343 AFPRGSTGQWILVDVLRGSSTEL------VSALCWKPDGRYLASASCNGQSFTIWDV-SE 501 + R T + + D RG +E V ++ + DG++LA+AS +S +W + + Sbjct: 77 SASRDRTVRLWIPDK-RGKFSEFKAHTAPVRSVDFSADGQFLATAS-EDKSIKVWSMYRQ 134 Query: 502 GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE-TNTWTSEPWSSSNGICNW 669 + R + ++SP G ++ D T +W+ TN +S S G N+ Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
>WD51B_HUMAN (Q8TC44) WD-repeat protein 51B| Length = 478 Score = 33.5 bits (75), Expect = 0.60 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 18/177 (10%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS-------YPGN---VASVKSGVTSSSFG 342 H+ + +++ PN ++ + LW+ Y G+ V SV+ + Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLA 76 Query: 343 AFPRGSTGQWILVDVLRGSSTEL------VSALCWKPDGRYLASASCNGQSFTIWDV-SE 501 + R T + + D RG +E V ++ + DG++LA+AS +S +W + + Sbjct: 77 SASRDRTVRLWIPDK-RGKFSEFKAHTAPVRSVDFSADGQFLATAS-EDKSIKVWSMYRQ 134 Query: 502 GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE-TNTWTSEPWSSSNGICNW 669 + R + ++SP G ++ D T +W+ TN +S S G N+ Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTF 603 + P G +ASA + Q+ +WDV L + ++ + + PSG+Y +TA DGT Sbjct: 194 FNPSGTCIASAGSD-QTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTL 252 Query: 604 HL 609 + Sbjct: 253 KI 254
>GBLP_CHLRE (P25387) Guanine nucleotide-binding protein beta subunit-like| protein Length = 318 Score = 33.5 bits (75), Expect = 0.60 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = +1 Query: 433 PDGRYLASASCNGQSFTIWDVSE-----GLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFD 594 P L SAS +S +W++ G RG S + V S G + LT +D Sbjct: 27 PSSNTLLSAS-RDKSVLVWELERSESNYGYARKALRGHSHFVQDVVISSDGQFCLTGSWD 85 Query: 595 GTFHLWETNTWTS 633 GT LW+ NT T+ Sbjct: 86 GTLRLWDLNTGTT 98
>TEP1_MOUSE (P97499) Telomerase protein component 1 (Telomerase-associated| protein 1) (Telomerase protein 1) (p240) (p80 homolog) Length = 2629 Score = 33.5 bits (75), Expect = 0.60 Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 19/162 (11%) Frame = +1 Query: 184 TSEHQKEVKAIEWRPNSGKMIAVGCKGG-ICLWSASYPGNVASVKSGVTSSSFGAF-PRG 357 T HQ ++ P+ +++A C GG + LW + G +A + S + AF P G Sbjct: 1762 TKAHQYQITGCCLSPDR-RLLATVCLGGYLKLWD-TVRGQLAFQYTHPKSLNCVAFHPEG 1819 Query: 358 ---STGQW-----------ILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV 495 +TG W + V G+ V +L + G+ +A +G + +W Sbjct: 1820 QVVATGSWAGSITFFQADGLKVTKELGAPGPSVCSLAFNKPGKIVAVGRIDG-TVELWAW 1878 Query: 496 SEGL---GTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 EG P + G +S V + +GD FLTA DG LW Sbjct: 1879 QEGARLAAFPAQCGC--VSAVLFLHAGDRFLTAGEDGKAQLW 1918
>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A| Length = 407 Score = 33.5 bits (75), Expect = 0.60 Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGG-ICLW-------SASYPGNVASVKSGVTSSSFGAF 348 H+ V + + P SG ++A G + + +W S + + A+V+S S +F Sbjct: 60 HKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 118 Query: 349 PRGSTGQWILV------DVLRGSSTELVSALCWK--PDGRYLASASCNGQSFTIWDVS-- 498 S + + V L S + C K PDGR + SAS + ++ +WD S Sbjct: 119 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS-DDKTVKLWDKSSR 177 Query: 499 EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 E + + G ++ V + PSG A D T +W+ T Sbjct: 178 ECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSPSGDYFLTAK 588 V+ L + P G YL +AS + + I D+ EG L + + V +S +G+YF + Sbjct: 232 VNGLSFHPSGNYLITASSDS-TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290 Query: 589 FDGTFHLWETN 621 D +W++N Sbjct: 291 SDEQVMVWKSN 301
>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A| Length = 407 Score = 33.5 bits (75), Expect = 0.60 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSPSGDYFLTAK 588 V+AL + P G YL +AS + + I D+ EG L + + V +S +G+YF + Sbjct: 232 VNALSFHPSGNYLVTASSDS-TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290 Query: 589 FDGTFHLWETN 621 D +W++N Sbjct: 291 SDEQVMVWKSN 301 Score = 33.1 bits (74), Expect = 0.78 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +1 Query: 406 ELVSALCWKPDGRYLASASCNGQSFTIWDVS-EGLGTPIRRGLSSISLVRWSPSGDYFLT 582 + V+ + + P G LAS S ++ IW + +G T R +++ V + G F+T Sbjct: 62 DAVTCVNFSPSGHLLASGS-RDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120 Query: 583 AKFDGTFHLWETN 621 A D T +W T+ Sbjct: 121 ASDDKTVKVWSTH 133 Score = 32.3 bits (72), Expect = 1.3 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 18/162 (11%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGG-ICLW-------SASYPGNVASVKSGVTSSSFGAF 348 H+ V + + P SG ++A G + + +W S + + A+V+S S +F Sbjct: 60 HKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 118 Query: 349 PRGSTGQWILV------DVLRGSSTELVSALCWK--PDGRYLASASCNGQSFTIWDVS-- 498 S + + V L S + C K PDGR + SAS + ++ +WD + Sbjct: 119 VTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS-DDKTVKLWDKTSR 177 Query: 499 EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 E + + G ++ V + PSG A D T +W+ T Sbjct: 178 ECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
>PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog| Length = 854 Score = 33.5 bits (75), Expect = 0.60 Identities = 29/157 (18%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Frame = +1 Query: 202 EVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 +++ + P S ++ VG G+ P + +T S+ STG WI + Sbjct: 256 KLRCAAFHPTSN-LLVVGFSSGL-FGIYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAI 313 Query: 382 D------------------VLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGL 507 + + S + +S L + DG+ + + + +G+ +WD++ G Sbjct: 314 GSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGK-IKVWDMNSGF 372 Query: 508 G-TPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 + S++S + +S G+ ++ DG+ W+ Sbjct: 373 CIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWD 409 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSIS 543 V +L + PDG+ + AS +GQ T W+V EG T + G +S Sbjct: 512 VLSLAFHPDGKEVCVASLDGQ-LTFWNVQEGKQTSLIDGRKDLS 554
>GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subunit 5| (Transducin beta chain 5) (Gbeta5) Length = 353 Score = 33.5 bits (75), Expect = 0.60 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 L A N + +WDV +G I G + +S +R SP G F + +D T +W Sbjct: 297 LLFAGYNDYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>ARC1A_RAT (Q99PD4) Actin-related protein 2/3 complex subunit 1A| Length = 370 Score = 33.5 bits (75), Expect = 0.60 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 23/152 (15%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK 261 +WN + +A +V ++ S ++ L EH + I+W P S +++ G Sbjct: 15 AWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHEL-KEHNGHITGIDWAPKSDRIVTCGAD 73 Query: 262 GGICLWSA-----------------------SYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 +WS S N +V SG S F S W Sbjct: 74 RNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFE--SENDW 131 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCN 468 + ++ V +L W P+ LA+ SC+ Sbjct: 132 WVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCD 163
>ARC1A_MOUSE (Q9R0Q6) Actin-related protein 2/3 complex subunit 1A (SOP2-like| protein) (Sid 329) Length = 370 Score = 33.5 bits (75), Expect = 0.60 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 23/152 (15%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK 261 +WN + +A +V ++ S ++ L EH + I+W P S +++ G Sbjct: 15 AWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHEL-KEHNGHITGIDWAPKSDRIVTCGAD 73 Query: 262 GGICLWSA-----------------------SYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 +WS S N +V SG S F S W Sbjct: 74 RNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFE--SENDW 131 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCN 468 + ++ V +L W P+ LA+ SC+ Sbjct: 132 WVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCD 163
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 33.5 bits (75), Expect = 0.60 Identities = 22/81 (27%), Positives = 43/81 (53%) Frame = +1 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWS 558 V+ +R S+T+ V+ + DG+ LASA + ++ + + T + + I+ +R+S Sbjct: 644 VNSVRASTTK-VTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFS 702 Query: 559 PSGDYFLTAKFDGTFHLWETN 621 PS T+ FD T +W+ + Sbjct: 703 PSQLRLATSSFDKTVRVWDAD 723 Score = 28.9 bits (63), Expect(2) = 2.3 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = +1 Query: 385 VLRGSSTELVSALCWKPD-GRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRWS 558 V +G ST++ ++P G+YLA++S N + DV ++ + ++ + I+ V W Sbjct: 774 VYKGGSTQIR----FQPRVGKYLAASSAN--LVNVLDVETQAIRHSLQGHANPINSVCWD 827 Query: 559 PSGDYFLTAKFDGTFHLWETNT 624 PSGD FL + + +W T Sbjct: 828 PSGD-FLASVSEDMVKVWTLGT 848 Score = 21.2 bits (43), Expect(2) = 2.3 Identities = 5/10 (50%), Positives = 9/10 (90%) Frame = +3 Query: 360 YWSVDSGGCS 389 YWS+++G C+ Sbjct: 763 YWSINNGSCT 772
>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A| Length = 405 Score = 33.1 bits (74), Expect = 0.78 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSPSGDYFLTAK 588 V+AL + P G YL +AS + + I D+ EG L + + V +S +G+YF + Sbjct: 232 VNALSFHPSGNYLITASSDS-TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290 Query: 589 FDGTFHLWETN 621 D +W++N Sbjct: 291 SDEQVMVWKSN 301 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVS--EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGT 600 + PDGR + SAS + ++ +WD + E + + G ++ V + PSG A D T Sbjct: 153 FSPDGRLIVSAS-DDKTVKLWDKTSRECIHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNT 210 Query: 601 FHLWETNT 624 +W+ T Sbjct: 211 VKVWDART 218
>PWP2_HUMAN (Q15269) Periodic tryptophan protein 2 homolog| Length = 919 Score = 33.1 bits (74), Expect = 0.78 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISL-VR 552 L+DVL G +S LC+ P LASAS + ++ +WD+ + T L+S +L V Sbjct: 493 LLDVLSGHEGP-ISGLCFNPMKSVLASASWD-KTVRLWDMFDSWRTKETLALTSDALAVT 550 Query: 553 WSPSGDYFLTAKFDGTFHLWE 615 + P G A + W+ Sbjct: 551 FRPDGAELAVATLNSQITFWD 571
>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)| (E(spl)m9/10) Length = 719 Score = 33.1 bits (74), Expect = 0.78 Identities = 37/152 (24%), Positives = 52/152 (34%), Gaps = 23/152 (15%) Frame = +1 Query: 229 NSGKMIAVGCKGGICLWSASYPGN------VASVKSGVTSSSFGAFPRGST--------- 363 N K + G KG + +W S PGN + ++ S P G T Sbjct: 443 NPTKYVYTGGKGCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 502 Query: 364 -GQWILVDVLRGSSTELVS------ALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPI 519 W L EL S AL PD + S C+ + +WD+ +E L Sbjct: 503 LSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNEILVRQF 561 Query: 520 RRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 + S + SP G T D T W+ Sbjct: 562 QGHTDGASCIDISPDGSRLWTGGLDNTVRSWD 593
>GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subunit-like| protein (GPB-LR) (RWD) Length = 334 Score = 33.1 bits (74), Expect = 0.78 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 15/105 (14%) Frame = +1 Query: 355 GSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD-------VSEGLGT 513 G+ +L V+ G + ++V+A+ D +S +S +WD V EG G Sbjct: 3 GAQESLVLAGVMHGHN-DVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGA 61 Query: 514 -----PIRRGLSSISLVR---WSPSGDYFLTAKFDGTFHLWETNT 624 P RR V+ S G + L+ +DG LW+ +T Sbjct: 62 SEYGVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLST 106
>TEP1_RAT (O08653) Telomerase protein component 1 (rTLP1)| (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p230) (p80 telomerase homolog) Length = 2629 Score = 33.1 bits (74), Expect = 0.78 Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 14/127 (11%) Frame = +1 Query: 241 MIAVGCKGGICLWSA----------SYPGNVASVKSGVTSSSFGAFPRGSTGQWILV--- 381 ++ VG G LW + G V + + S S W + Sbjct: 2222 VVTVGLDGATKLWHPLLVCQIHTLQGHSGPVTAAAASEASGLLLTSDNSSVRLWQIPKEA 2281 Query: 382 -DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWS 558 D + S+ +++A+ W PDG + S + G+ T+W ++ + T R +S + W Sbjct: 2282 DDTCKPRSSAVITAVAWAPDGSLVVSGNEAGE-LTLWQKAQAVAT--ARAPGRVSDLIWC 2338 Query: 559 PSGDYFL 579 + +F+ Sbjct: 2339 SANAFFV 2345 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Frame = +1 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRW 555 + L+G S + +A + G L S + S +W + E T R + I+ V W Sbjct: 2242 IHTLQGHSGPVTAAAASEASGLLLTS---DNSSVRLWQIPKEADDTCKPRSSAVITAVAW 2298 Query: 556 SPSGDYFLTAKFDGTFHLWE 615 +P G ++ G LW+ Sbjct: 2299 APDGSLVVSGNEAGELTLWQ 2318
>WDR20_MOUSE (Q9D5R2) WD-repeat protein 20| Length = 567 Score = 33.1 bits (74), Expect = 0.78 Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 14/163 (8%) Frame = +1 Query: 166 KESCSLTSEHQ----KEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSS 333 KE+ L +E + V ++W P S + V G Y NV G T+ Sbjct: 135 KETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSG-----NMYSYNVEHTY-GTTAP 188 Query: 334 SFGAFPRGSTGQWILVDVLRGSSTE---------LVSALCWKPDGRYLASASCNGQSFTI 486 + +G + V + ST ++ + PDG++LA S +G Sbjct: 189 HYQLLKQGES---FAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVF 245 Query: 487 -WDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLW 612 +D +E GT ++ + + WSP G Y +T D +W Sbjct: 246 NFDSAELHGT-MKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVW 287
>IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD and| tetratricopeptide repeats protein 2) Length = 1462 Score = 33.1 bits (74), Expect = 0.78 Identities = 20/67 (29%), Positives = 30/67 (44%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKF 591 V++LCW P LA G+ + T + I+++RWSPSG+ L+ Sbjct: 64 VASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPLTHTADITVLRWSPSGNCLLSGDR 123 Query: 592 DGTFHLW 612 G LW Sbjct: 124 LGVLLLW 130 Score = 33.1 bits (74), Expect = 0.78 Identities = 19/80 (23%), Positives = 35/80 (43%) Frame = +1 Query: 64 FDTKKVSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKM 243 F + W+P + LA +VTV + +D KE ++ H ++ + W P+ + Sbjct: 62 FRVASLCWHPTRLVLAVGWETGEVTVFNKQD---KEQHTMPLTHTADITVLRWSPSGNCL 118 Query: 244 IAVGCKGGICLWSASYPGNV 303 ++ G + LW G V Sbjct: 119 LSGDRLGVLLLWRLDQRGRV 138
>GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subunit 5| (Transducin beta chain 5) (Gbeta5) Length = 395 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 L A N + +WDV +G I G + +S +R SP G F + +D T +W Sbjct: 339 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subunit 5| (Transducin beta chain 5) (Gbeta5) Length = 395 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 L A N + +WDV +G I G + +S +R SP G F + +D T +W Sbjct: 339 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subunit 5| (Transducin beta chain 5) (Gbeta5) Length = 353 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 L A N + +WDV +G I G + +S +R SP G F + +D T +W Sbjct: 297 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subunit 5| (Transducin beta chain 5) (Gbeta5) Length = 353 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 L A N + +WDV +G I G + +S +R SP G F + +D T +W Sbjct: 297 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subunit 5| (Transducin beta chain 5) (Gbeta5) Length = 353 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLW 612 L A N + +WDV +G I G + +S +R SP G F + +D T +W Sbjct: 297 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>ARC1A_HUMAN (Q92747) Actin-related protein 2/3 complex subunit 1A (SOP2-like| protein) Length = 370 Score = 33.1 bits (74), Expect = 0.78 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 23/152 (15%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK 261 +WN + +A +V ++ S ++ L EH + I+W P S +++ G Sbjct: 15 AWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHEL-KEHNGHITGIDWAPKSDRIVTCGAD 73 Query: 262 GGICLWSA-----------------------SYPGNVASVKSGVTSSSFGAFPRGSTGQW 372 +WS S N +V SG S F S W Sbjct: 74 RNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFE--SENDW 131 Query: 373 ILVDVLRGSSTELVSALCWKPDGRYLASASCN 468 + ++ V +L W P+ LA+ SC+ Sbjct: 132 WVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCD 163
>WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B| Length = 476 Score = 32.7 bits (73), Expect = 1.0 Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 17/176 (9%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSAS-------YPGNVASVKSGVTSSSFGAFP 351 H+ + + ++ PN ++ + LWS Y G+ V S S Sbjct: 17 HKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLA 76 Query: 352 RGSTGQWILVDVL--RGSSTEL------VSALCWKPDGRYLASASCNGQSFTIWDV-SEG 504 S + + + VL +G S+E V ++ + DG+ L +AS +S +W + + Sbjct: 77 SASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTAS-EDKSIKVWSMFRQR 135 Query: 505 LGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE-TNTWTSEPWSSSNGICNW 669 + R + ++SP G ++ D T +W+ TN +S S G N+ Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
>PWP2_MOUSE (Q8BU03) Periodic tryptophan protein 2 homolog| Length = 919 Score = 32.7 bits (73), Expect = 1.0 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISL-VR 552 L+DVL G VS LC+ P LASAS + ++ +WD+ + T L+S +L V Sbjct: 493 LLDVLSGHEGP-VSGLCFNPMKSILASASWD-KTVRLWDMFDSWRTKETLTLTSDALAVT 550 Query: 553 WSPSGDYFLTAKFDGTFHLWE 615 + P G A + W+ Sbjct: 551 FRPDGAELAVATLNSQITFWD 571 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Frame = +1 Query: 322 VTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD-VS 498 VT + G F ++ L+ L S + V+++ G ++A +W+ S Sbjct: 304 VTGFASGIFHLHELPEFNLIHSL-SISDQRVASVAINSSGDWIAFGCSGMGQLLVWEWQS 362 Query: 499 EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 E + +S+ + +SP G Y +T DG +W T Sbjct: 363 ESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNT 402
>THOC3_MOUSE (Q8VE80) THO complex subunit 3 (Tho3)| Length = 351 Score = 32.7 bits (73), Expect = 1.0 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGL--GTPIRRGLSSISLVRWSPSG-DYFLT 582 V ++ W DGR LAS S + + + L R S+ + W PS D F+T Sbjct: 58 VHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVT 117 Query: 583 AKFDGTFHLWETNT 624 A D T +W+ T Sbjct: 118 ASGDKTIRIWDVRT 131
>THOC3_HUMAN (Q96J01) THO complex subunit 3 (Tho3) (TEX1 homolog)| Length = 351 Score = 32.7 bits (73), Expect = 1.0 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGL--GTPIRRGLSSISLVRWSPSG-DYFLT 582 V ++ W DGR LAS S + + + L R S+ + W PS D F+T Sbjct: 58 VHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVT 117 Query: 583 AKFDGTFHLWETNT 624 A D T +W+ T Sbjct: 118 ASGDKTIRIWDVRT 131
>PK1IP_BRARE (Q6TNS2) p21-activated protein kinase-interacting protein 1-like| (PAK1-interacting protein 1-like) Length = 368 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 358 STGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 ST +W + +R + V++L P G+ S + ++ W++ EG I+ + Sbjct: 114 STKKWECLKTIRAHKGQ-VTSLSVHPSGKLALSVGTD-KTLRTWNLIEGRSAFIKNIKQN 171 Query: 538 ISLVRWSPSGDYF 576 +V WSP GD + Sbjct: 172 AEIVLWSPDGDKY 184
>MSI1_LYCES (O22466) WD-40 repeat protein MSI1| Length = 424 Score = 32.7 bits (73), Expect = 1.0 Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 45/244 (18%) Frame = +1 Query: 19 KQMLFPSCNPKL-LEEFDTKK--VSWNPHKHCLAFVSGKDQV-----TVHDFEDSDGKES 174 K L +CNP L L T+ +SW+ K +SG D ++ + E+ Sbjct: 161 KPPLDGACNPDLRLRGHSTEGYGLSWSQFKQG-HLLSGSDDSHICLWDINATPKNKALEA 219 Query: 175 CSLTSEHQKEVKAIEWRPNSGKMI-AVGCKGGICLWSASYPG------NVASVKSGVTSS 333 + H+ V+ + W + +VG + +W P +V + +S V Sbjct: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCL 279 Query: 334 SFGAFPR-----GSTGQWILVDVLRGSSTELVSALC---------WKPDGRYLASASCNG 471 +F F GST + + + LR ST L + C W P + ++ C G Sbjct: 280 AFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLG 339 Query: 472 QSFTIWDVS--EGLGTP------------IRRG-LSSISLVRWSPSGDYFL-TAKFDGTF 603 + +WD+S + TP I G S IS W+P D+ + + D Sbjct: 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNIL 399 Query: 604 HLWE 615 +W+ Sbjct: 400 QIWQ 403
>SWD1_YEAST (P39706) COMPASS component SWD1 (Complex proteins associated with| SET1 protein SWD1) (Set1C component SWD1) Length = 426 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = +1 Query: 421 LCWKPDGRYLASASCNGQSFTIWDVSEGL-----GTPIRRGLSSISLVRWSPSGDYFLTA 585 L + P G YLA NG + I+D+ G + + I+ + WSP G LT+ Sbjct: 32 LQFSPCGDYLALGCANG-ALVIYDMDTFRPICVPGNMLGAHVRPITSIAWSPDGRLLLTS 90 Query: 586 KFDGTFHLWE 615 D + LW+ Sbjct: 91 SRDWSIKLWD 100 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +1 Query: 394 GSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSE 501 G+ ++++ W PDGR L ++S S +WD+S+ Sbjct: 69 GAHVRPITSIAWSPDGRLLLTSS-RDWSIKLWDLSK 103
>HAT2_SCHPO (O94244) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 430 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 1/103 (0%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGG-ICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H+ EV +EW P+ ++A +C+W G + + S F Sbjct: 324 HEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLF------- 376 Query: 370 WILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVS 498 + G T +S W P+ R++ + + IW S Sbjct: 377 ------MHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPS 413
>APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1248 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 445 YLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 +LA + + +W+ RG LS + V +SP G FLT+ D T LWET Sbjct: 853 HLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWET 911
>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) Length = 801 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAK 588 V+ + P+ Y+A+ S + ++ +WDV G I G I + +SP+G + T Sbjct: 631 VNCTRYHPNSNYVATGSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGA 689 Query: 589 FDGTFHLWE 615 DG LW+ Sbjct: 690 TDGRVLLWD 698
>YGA4_YEAST (P53196) Hypothetical 46.4 kDa Trp-Asp repeats-containing protein| in PMC1-TFG2 intergenic region Length = 417 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAK 588 ++ L + P G L S+S + Q IW V +G G ++++ + G L+A Sbjct: 139 ITKLKFFPSGEALISSSQDMQ-LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS 197 Query: 589 FDGTFHLWETNTWTS 633 DGT LWE T T+ Sbjct: 198 LDGTIRLWECGTGTT 212
>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 777 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = +1 Query: 409 LVSALCW-KPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISL-VRWSPSGDYFLT 582 ++SALC+ K ++ ++ + +WD++ + G SS+ + + P+G + L+ Sbjct: 147 VISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLS 206 Query: 583 AKFDGTFHLW 612 D T +W Sbjct: 207 GSRDKTVQVW 216
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAK 588 + ++C+ PDG+YLA+ + + +WD+ S + I + +S G + Sbjct: 347 IRSVCFSPDGKYLATGA-EDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGS 405 Query: 589 FDGTFHLWETNT 624 D T LW+ T Sbjct: 406 GDRTVRLWDIET 417 Score = 31.2 bits (69), Expect = 3.0 Identities = 39/190 (20%), Positives = 81/190 (42%), Gaps = 23/190 (12%) Frame = +1 Query: 148 FEDSDGKESCSLTSEH-----QKEVKAIEWRPNSGKMIAVGCKGGIC-LWSA-------S 288 ++ G++ C L E+ ++++ + P+ GK +A G + + +W + Sbjct: 323 YDVETGEKLCILQDENIDLTGDLYIRSVCFSPD-GKYLATGAEDKLIRVWDIQSRTIRNT 381 Query: 289 YPGNVASVKSGVTSSSFGAFPRGSTGQWI-LVDVLRGSSTELVS------ALCWKPDGRY 447 + G+ + S S GS + + L D+ G +T ++S + PD ++ Sbjct: 382 FHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSIEDGVTTVAISPDKQF 441 Query: 448 LASASCNGQSFTIWDVSEGLGTPIRRG---LSSISLVRWSPSGDYFLTAKFDGTFHLWET 618 +A+ S + +S +WD+ L + S+ V +SP G ++ D T +WE Sbjct: 442 VAAGSLD-KSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWEL 500 Query: 619 NTWTSEPWSS 648 + P S+ Sbjct: 501 SAPRGIPSSA 510
>LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T+ V + + G+ LAS S + + +WD G ++S V P+GD+ + Sbjct: 149 TDSVQDISFDHSGKLLASCSAD-MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 207 Query: 580 TAKFDGTFHLWETNT 624 +A D T +WE T Sbjct: 208 SASRDKTIKMWEVQT 222
>LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T+ V + + G+ LAS S + + +WD G ++S V P+GD+ + Sbjct: 149 TDSVQDISFDHSGKLLASCSAD-MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 207 Query: 580 TAKFDGTFHLWETNT 624 +A D T +WE T Sbjct: 208 SASRDKTIKMWEVQT 222
>LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T+ V + + G+ LAS S + + +WD G ++S V P+GD+ + Sbjct: 149 TDSVQDISFDHSGKLLASCSAD-MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 207 Query: 580 TAKFDGTFHLWETNT 624 +A D T +WE T Sbjct: 208 SASRDKTIKMWEVQT 222
>LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T+ V + + G+ LAS S + + +WD G ++S V P+GD+ + Sbjct: 149 TDSVQDISFDHSGKLLASCSAD-MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 207 Query: 580 TAKFDGTFHLWETNT 624 +A D T +WE T Sbjct: 208 SASRDKTIKMWEVQT 222
>LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T+ V + + G+ LAS S + + +WD G ++S V P+GD+ + Sbjct: 149 TDSVEDISFDHSGKLLASCSAD-MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 207 Query: 580 TAKFDGTFHLWETNT 624 +A D T +WE T Sbjct: 208 SASRDKTIKMWEVQT 222
>WDFY2_HUMAN (Q96P53) WD repeat and FYVE domain-containing protein 2 (WD40- and| FYVE domain-containing protein 2) (Zinc finger FYVE domain-containing protein 22) Length = 400 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/48 (43%), Positives = 25/48 (52%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPI 519 LV RG T V+ALCW P R L S S + S +WD+ GT I Sbjct: 191 LVTTFRGH-TGGVTALCWDPVQRVLFSGS-SDHSVIMWDIGGRKGTAI 236
>IF39_TOBAC (P56821) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) (eIF3 p110) (eIF3b) Length = 719 Score = 32.0 bits (71), Expect = 1.7 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%) Frame = +1 Query: 376 LVDVLRGSSTELVSALCWKPDGRYLASASCNG--QSFTIWDVSEGLGTPIRRGLSSISLV 549 LV L + +AL W P GR+L G +DV E L T + V Sbjct: 504 LVSKLTTLKGKQANALYWSPGGRFLILTGLKGFNGQLEFFDVDE-LETMASAEHFMATDV 562 Query: 550 RWSPSGDYFLTA-----KFDGTFHLWETN 621 W P+G Y T+ + + F++W N Sbjct: 563 EWDPTGRYVATSVTSVHEMENGFNIWSFN 591
>CDC20_HUMAN (Q12834) Cell division cycle protein 20 homolog (p55CDC)| Length = 499 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Frame = +1 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLG--TPIR---RGLSSIS 543 V L G S E V L W PDGR+LAS N +W + G G P++ + ++ Sbjct: 302 VATLSGHSQE-VCGLRWAPDGRHLASGG-NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 359 Query: 544 LVRWSP 561 V W P Sbjct: 360 AVAWCP 365
>ARC1B_RAT (O88656) Actin-related protein 2/3 complex subunit 1B (ARP2/3| complex 41 kDa subunit) (p41-ARC) Length = 371 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGK-ESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 +WN + +A +V H +E S K EH +V I+W P S +++ G Sbjct: 14 AWNKDRTQIAICPNNHEV--HIYEKSGAKWNKVHELKEHNGQVTGIDWAPESNRIVTCGT 71 Query: 259 KGGICLWS 282 +W+ Sbjct: 72 DRNAYVWT 79
>ARC1B_MOUSE (Q9WV32) Actin-related protein 2/3 complex subunit 1B (ARP2/3| complex 41 kDa subunit) (p41-ARC) Length = 371 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGK-ESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 +WN + +A +V H +E S K EH +V I+W P S +++ G Sbjct: 14 AWNKDRTQIAICPNNHEV--HIYEKSGAKWNKVHELKEHNGQVTGIDWAPESNRIVTCGT 71 Query: 259 KGGICLWS 282 +W+ Sbjct: 72 DRNAYVWT 79
>TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) Length = 800 Score = 32.0 bits (71), Expect = 1.7 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAK 588 V+ + P+ Y+A+ S + ++ +WDV G I G I + +SP+G + T Sbjct: 630 VNCTRFHPNSNYVATGSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGA 688 Query: 589 FDGTFHLWE 615 DG LW+ Sbjct: 689 TDGRVLLWD 697
>GLE2_YEAST (P40066) Nucleoporin GLE2 (Nuclear pore protein GLE2) (poly(A) RNA| export protein RAE1) Length = 365 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Frame = +1 Query: 385 VLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGL--GTPIRRGLSSISLVRWS 558 V+ + + +S + + P ++ SAS IWDV G+ G S + RWS Sbjct: 30 VINSPAEDSISDIAFSPQQDFMFSASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRWS 89 Query: 559 PSGDYFLTAKFDGTFHLWE 615 G + D L++ Sbjct: 90 NDGTKVASGGCDNALKLYD 108
>CDH1_YEAST (P53197) APC/C activator protein CDH1 (CDC20 homolog 1) (Homolog of| CDC twenty 1) Length = 566 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Frame = +1 Query: 79 VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 + WN + LA SG + VH +E + K EH+ VKA+ W P+ ++A G Sbjct: 391 LKWNVADNKLA--SGGNDNVVHVYEGTS-KSPILTFDEHKAAVKAMAWSPHKRGVLATG- 446 Query: 259 KGG-----ICLWSASYPGNVASVKSG 321 GG + +W+ + ++ + SG Sbjct: 447 -GGTADRRLKIWNVNTSIKMSDIDSG 471
>LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migration abnormal| protein 1) Length = 404 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Frame = +1 Query: 361 TGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGT--PIRRGLS 534 TGQ L L+G T+ V+ + G+ L S S + S +WD + ++ Sbjct: 137 TGQ--LERTLKGH-TDAVNDIAIDAAGKQLVSCSSD-LSIKLWDFGQTYDCLKSLKGHEH 192 Query: 535 SISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 ++S V + P+GD+ L+A D T W+ +T Sbjct: 193 TVSSVTFLPTGDFVLSASRDHTIKQWDIST 222 Score = 30.0 bits (66), Expect = 6.6 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Frame = +1 Query: 133 VTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASV 312 VTV F K + +H+ V+ +EW P++ G GN + Sbjct: 257 VTVWSFATKSAK---LVLRDHEHAVECVEWAPDTAYTNVTG---------QQPEGNSTHI 304 Query: 313 K-SGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIW 489 SG S A+ +TG +L +L + V L + P G+YL S + + ++ +W Sbjct: 305 LFSGSRDRSIKAW-NINTGD-VLFTLL--AHENWVRGLAFHPKGKYLISVA-DDKTLRVW 359 Query: 490 DVS-EGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWE 615 ++S + I +S V + + + +T D + +WE Sbjct: 360 ELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
>SWD1_SCHPO (O42858) Set1 complex component swd1 (Set1C component swd1)| (COMPASS component swd1) (Complex proteins associated with set1 protein swd1) Length = 398 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +1 Query: 415 SALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFLTAKF 591 +++ + +G +LAS NG S IWD+S + + G + +I V WS + LTA Sbjct: 28 TSIRFSTNGYHLASGLVNG-SVVIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASR 86 Query: 592 DGTFHLWE 615 D LW+ Sbjct: 87 DWKCILWD 94
>WS17_SCHMA (Q26544) WD-repeat protein SL1-17| Length = 301 Score = 31.6 bits (70), Expect = 2.3 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 379 VDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSS-ISLVR 552 V L G +T V ++ + PDGR LASAS + + ++DV +G L P G + V Sbjct: 179 VQFLDGHATP-VRSVSFSPDGRLLASAS-DDKQIKVFDVRDGRLVIPSLNGHKGWVVSVD 236 Query: 553 WSPSGDYFLTAKFDGTFHLWE 615 ++ + +TA D + +W+ Sbjct: 237 FASDNRHLVTASTDCSVRIWD 257
>YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in chromosome I| Length = 509 Score = 31.6 bits (70), Expect = 2.3 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 538 ISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 I++VRW+P G LT G F LW T+ E Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFE 116 Score = 30.8 bits (68), Expect = 3.9 Identities = 26/105 (24%), Positives = 44/105 (41%) Frame = +1 Query: 322 VTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSE 501 +T SS G F + G +++ S V W DGR+L S G ++ + Sbjct: 97 LTGSSTGEFTLWN-GLTFNFELINQSHDYAVRCAEWSTDGRWLISGDGGGM-VKYFEPNL 154 Query: 502 GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSE 636 ++ + V +SP+ F+TA DG+ +W + T E Sbjct: 155 NNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEE 199 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFLTA 585 +++ + W PDGR L + S G+ FT+W+ I + ++ WS G + ++ Sbjct: 83 VINVVRWTPDGRRLLTGSSTGE-FTLWNGLTFNFELINQSHDYAVRCAEWSTDGRWLISG 141 Query: 586 KFDGTFHLWETN 621 G +E N Sbjct: 142 DGGGMVKYFEPN 153
>WDHD1_XENLA (O13046) WD repeat and HMG-box DNA-binding protein 1 (Acidic| nucleoplasmic DNA-binding protein 1) (And-1) Length = 1127 Score = 31.6 bits (70), Expect = 2.3 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 28/184 (15%) Frame = +1 Query: 31 FPSCNPK-LLEEFDTKK--VSWNPHKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQK 201 FP P +L F T V +N +A SG V V EDS +++ H Sbjct: 81 FPDGEPDGILTRFTTNANHVVFNTDGTRIAAGSGDFLVKVLQVEDSTQQKTLR---GHSA 137 Query: 202 EVKAIEWRPNSGKMIAVGCKGGICLWSASYP------------GNVASVKS------GVT 327 V ++ + P + + C G + +W S +V + KS Sbjct: 138 PVLSVSFDPKDIYLASASCDGSVRIWKISDQTCEAVLPLLEKCNDVFNAKSICRLAWQPK 197 Query: 328 SSSFGAFPRGSTGQWILVDVLRGSS-------TELVSALCWKPDGRYLASASCNGQSFTI 486 S F A P G D L+ T+ V+ + W P G+YL + S +G Sbjct: 198 SGKFVAIPVGKAVHLYDRDSLKNICTLSDDFITQPVNIVAWSPCGQYLVAGSVDG-CIVA 256 Query: 487 WDVS 498 W+++ Sbjct: 257 WNIA 260
>ARC1B_HUMAN (O15143) Actin-related protein 2/3 complex subunit 1B (ARP2/3| complex 41 kDa subunit) (p41-ARC) Length = 371 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 82 SWNPHKHCLAFVSGKDQVTVHDFEDSDGK-ESCSLTSEHQKEVKAIEWRPNSGKMIAVGC 258 +WN + +A +V H +E S K EH +V I+W P S +++ G Sbjct: 14 AWNKDRTQIAICPNNHEV--HIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGT 71 Query: 259 KGGICLWS 282 +W+ Sbjct: 72 DRNAYVWT 79
>YEV4_YEAST (P40077) Hypothetical 64.0 kDa protein in CKI3-RSP5 intergenic| region Length = 573 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/99 (19%), Positives = 46/99 (46%) Frame = +1 Query: 127 DQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVA 306 D++ + D + DGK C L ++ + ++++++ N+G + + +G + W N+ Sbjct: 336 DKIQIWDIQSCDGKPVCELYAK-KGYIESLKFNENTGALYSSDDQGFVICWDLQ---NLQ 391 Query: 307 SVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSAL 423 ++K G F + S + +L + +VS + Sbjct: 392 NMKYGELVHGFNSISLDSESELLLTKQVFQCGNIIVSGM 430
>GID7_YEAST (P25569) Glucose-induced degradation protein 7| Length = 759 Score = 31.2 bits (69), Expect = 3.0 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Frame = +1 Query: 400 STELVSALCWKPDGRYLASA---SCNGQSFTIWDVSEGLGTPIRRGLSSIS----LVRWS 558 +T+ + L + P+G+YLASA S G T++DV + I + S+S + +S Sbjct: 337 TTDEIWFLTFSPNGKYLASATSESSRGYFITVYDVEQDF--KIYKTCVSLSQSVLYLMFS 394 Query: 559 PSGDYFLTAKFDGTFHLWETNTWTSEPWSSS 651 P Y + F +++ N TS P +S+ Sbjct: 395 PDSRYLVACPFSEDVTIYDMNA-TSLPDASA 424
>COR1C_MOUSE (Q9WUM4) Coronin-1C (Coronin-3)| Length = 474 Score = 31.2 bits (69), Expect = 3.0 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 4/138 (2%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKG-GICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQ 369 H V I+W P++ ++IA G + + +W G S+ V Sbjct: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVV-------------- 124 Query: 370 WILVDVLRGSSTELVSALCWKPDGR-YLASASCNGQSFTIWDVSEGLGTPIRRGLSS--I 540 +L G S V + W P R L SA C+ + IW+V G + S I Sbjct: 125 -----ILEGHSKR-VGIVAWHPTARNVLLSAGCD-NAIIIWNVGTGEALINLDDMHSDMI 177 Query: 541 SLVRWSPSGDYFLTAKFD 594 V WS +G TA D Sbjct: 178 YNVSWSRNGSLICTASKD 195
>WDR36_HUMAN (Q8NI36) WD repeat-containing protein 36 (T-cell activation WD| repeat-containing protein) (TA-WDRP) Length = 951 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKF 591 ++ + + PDGR+L SA+ + S WD+ G S+ V SP+GD+ T+ Sbjct: 625 INDMAFSPDGRWLISAAMD-CSIRTWDLPSGCLIDCFLLDSAPLNVSMSPTGDFLATSHV 683 Query: 592 DGT-FHLW 612 D +LW Sbjct: 684 DHLGIYLW 691
>WDR20_HUMAN (Q8TBZ3) WD-repeat protein 20 (DMR protein)| Length = 569 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKF 591 ++ + PDG++LA S +G S L ++ + V WSP G Y +T Sbjct: 223 LNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGE 282 Query: 592 DGTFHLW 612 D +W Sbjct: 283 DDLVTVW 289
>MSI1_YEAST (P13712) Chromatin assembly factor 1 subunit p50 (CAF-1 p50| subunit) (MSI1 protein) (IRA1 multicopy suppressor) Length = 422 Score = 31.2 bits (69), Expect = 3.0 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 5/121 (4%) Frame = +1 Query: 94 HKHCLAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCK--GG 267 +K+ L S ++ ++ + +S T EH V +EW PN ++A + G Sbjct: 306 YKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGL 365 Query: 268 ICLWSASYPGNV---ASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPD 438 + LW S + GV S+ A W++ V +S + WKP Sbjct: 366 VKLWDTSCEETIFTHGGHMLGVNDISWDAH-----DPWLMCSVANDNSVHI-----WKPA 415 Query: 439 G 441 G Sbjct: 416 G 416
>DYIN_DICDI (P54703) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic| dynein intermediate chain) Length = 652 Score = 31.2 bits (69), Expect = 3.0 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRR---GLSSISLVRWSPSGDYFLTAKFDG 597 W P + S + ++WD+++ L PI R S++ + WS G L G Sbjct: 546 WSPVHPSIFSTGDGSGTLSLWDLNQDLEGPIFRHKISNRSVNRLAWSHDGKRILVGDSGG 605 Query: 598 TFHLWETNTWTS 633 + L++++ ++S Sbjct: 606 SLSLFDSSEFSS 617
>RBBP4_BRARE (Q6P3H7) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 423 Score = 30.8 bits (68), Expect = 3.9 Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 14/203 (6%) Frame = +1 Query: 49 KLLEEFDTKKVSWNPHKHCL-AFVSGKDQVTVHDFEDSDGKESCS-------LTSEHQKE 204 K+ E + + + P C+ A + V V D+ K S HQKE Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKE 178 Query: 205 VKAIEWRPN-SGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSTGQWILV 381 + W PN +++ ICLW S P+ G+ + Sbjct: 179 GYGLSWNPNLRSCLLSASDDHTICLWDIS------------------TVPK--EGKIVDA 218 Query: 382 DVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV-SEGLGTP---IRRGLSSISLV 549 + T +V + W L + + Q IWD S P + + ++ + Sbjct: 219 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCL 278 Query: 550 RWSPSGDYFL-TAKFDGTFHLWE 615 ++P ++ L T D T LW+ Sbjct: 279 SFNPYSEFILATGSADKTVALWD 301
>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11| Length = 506 Score = 30.8 bits (68), Expect = 3.9 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 7/117 (5%) Frame = +1 Query: 295 GNVASVKSGVTSSSFGAFPRGSTGQWILV-DVLRGSSTELVSA-----LCWKPDGRYLAS 456 G++ASV S SS G S+ + + D+ G ++ A C + +G+++ S Sbjct: 345 GHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVS 404 Query: 457 ASCNGQSFTIWDVSEGLGTPIRRGLSS-ISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 S + + I++ S G + +G I VR++ + ++ +DGT +W NT Sbjct: 405 GSSD-LTIRIFEASSGKLLRMLQGHEDLIRTVRFND--EKIVSGGYDGTVRIWNFNT 458
>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS| box-containing WD protein SWiP-1) Length = 421 Score = 30.8 bits (68), Expect = 3.9 Identities = 29/133 (21%), Positives = 51/133 (38%) Frame = +1 Query: 106 LAFVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSA 285 L VS T+ ++ D + HQ V + + P+S + +VG + LW+ Sbjct: 184 LILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNM 243 Query: 286 SYPGNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASC 465 ++ ++ L G ++V A + PDG LA+AS Sbjct: 244 D--------------------------KYTMIRKLEGHHHDVV-ACDFSPDGALLATASY 276 Query: 466 NGQSFTIWDVSEG 504 + + + IWD G Sbjct: 277 DTRVY-IWDPHNG 288
>GBB2_TOBAC (P93398) Guanine nucleotide-binding protein beta subunit 2| Length = 377 Score = 30.8 bits (68), Expect = 3.9 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 4/161 (2%) Frame = +1 Query: 154 DSDGKESCS-LTSEHQKEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPGNVASVKSGVT 327 D DG S + S H+ V + ++ P+ + C LW + +G+ Sbjct: 141 DKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHVITSSGDQTCVLWD---------ITTGLR 191 Query: 328 SSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWD--VSE 501 +S FG + G + ++ S + R S SC+ + +WD V+ Sbjct: 192 TSVFGG------------EFQSGHTADVQSVSISSSNPRLFVSGSCDSTA-RLWDTRVAS 238 Query: 502 GLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNT 624 ++ V++ P G+ F T DGT L++ T Sbjct: 239 RAQRTFYGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRT 279
>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 889 Score = 30.8 bits (68), Expect = 3.9 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = +1 Query: 433 PDGRYLASASCNGQSFTIWDV-SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHL 609 PD Y+ +AS + + IWD ++ + +S++S + P+ ++ DGT + Sbjct: 196 PDKPYMITAS-DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 Query: 610 WETNTWTSE 636 W ++T+ E Sbjct: 255 WNSSTYKVE 263
>PK1IP_CHICK (Q5ZKU8) p21-activated protein kinase-interacting protein 1-like| (PAK1-interacting protein 1-like) Length = 369 Score = 30.8 bits (68), Expect = 3.9 Identities = 14/57 (24%), Positives = 30/57 (52%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLT 582 V++L P G+ S + ++ W++ EG I+ + +++WSP G+ ++T Sbjct: 119 VTSLSIHPSGKLALSVGTD-KTLRTWNLVEGRSAFIKNLKQNAHIIKWSPDGEKYVT 174
>LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T+ V + + G+ L S S + + +WD G ++S V P+GD+ + Sbjct: 149 TDSVQDISFDHSGKLLTSCSAD-MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLV 207 Query: 580 TAKFDGTFHLWETNT 624 +A D T +WE T Sbjct: 208 SASRDKTIKMWEVQT 222
>HSV2_KLULA (Q6CN23) SVP1-like protein 2| Length = 339 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +1 Query: 439 GRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLV--RWSPSGDYFLTAKFDGTFHL 609 G +A+ S +G ++ G L RRGL S++ RWSP G T H+ Sbjct: 191 GDMVATCSQDGTLIRVFQTDNGVLVREFRRGLDRTSIIDMRWSPDGSKLAVVSDKWTLHV 250 Query: 610 WE 615 +E Sbjct: 251 FE 252
>YE85_SCHPO (O14301) Hypothetical WD-repeat protein C9G1.05 in chromosome I| Length = 595 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = +1 Query: 427 WKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFH 606 + P+ ASA +G+ + + I SI + WSP F+T+ + Sbjct: 197 YSPNDERFASAGADGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCK 256 Query: 607 LWETNTWT-SEPWSSSN 654 +W+ NT + W SS+ Sbjct: 257 IWDANTGSLIREWLSSD 273 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +1 Query: 400 STELVSALCWKPDGRYLASASCNGQSFTIWDVS--EGLGTPIRRGLSSISLVRWSPSGDY 573 ST ++ L + PDG+YLA +G+ ++D + E + + I + W+ + Sbjct: 478 STAPITCLAYSPDGKYLACGDASGK-VVLYDANSREVITSRWAFHTGRILGMSWNAKSTH 536 Query: 574 FLTAKFDGTFHLW 612 TA D H++ Sbjct: 537 LATASLDTNIHIY 549
>GBLP_TOBAC (P49026) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 30.8 bits (68), Expect = 3.9 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 9/92 (9%) Frame = +1 Query: 385 VLRGSS---TELVSALCWKPDGRYLASASCNGQSFTIWDVSEG---LGTPIRRGLSSISL 546 VLRG+ T+ V+A+ D + S +S +W +++ G P RR Sbjct: 7 VLRGTMRAHTDWVTAIATAVDNSDMIVTSSRDKSIIVWSITKDGPQYGVPRRRLTGHGHF 66 Query: 547 VR---WSPSGDYFLTAKFDGTFHLWETNTWTS 633 V+ S G + L+ +DG LW+ T+ Sbjct: 67 VQDVVLSSDGMFALSGSWDGELRLWDLQAGTT 98
>AHI1_HUMAN (Q8N157) Jouberin (Abelson helper integration site 1 protein| homolog) (AHI-1) Length = 1196 Score = 30.8 bits (68), Expect = 3.9 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = +1 Query: 436 DGRYLASA--SCNGQSFTIWDVSEGLGTPIRRG-LSSISLVRWSPSGDYFLTAKFDGTFH 606 +GR LA+A S +G ++++ G G L+ I + WS Y LT+ DGT Sbjct: 620 NGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTSSSDGTAR 679 Query: 607 LWE-----TNTWTSEPWSS 648 +W+ TNT+ P S Sbjct: 680 IWKNEINNTNTFRVLPHPS 698
>WDFY2_MOUSE (Q8BUB4) WD repeat and FYVE domain-containing protein 2 (WD40- and| FYVE domain-containing protein 2) Length = 400 Score = 30.4 bits (67), Expect = 5.1 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPI 519 V+ALCW P R L S S + S +WD+ GT I Sbjct: 202 VTALCWDPVQRVLFSGS-SDHSVIMWDIGGRKGTAI 236
>P2SAF_ARATH (O82660) Photosystem II stability/assembly factor HCF136,| chloroplast precursor Length = 403 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLS-SISLVRWSPSGDYFL 579 T SA+ PDGRY+A S G F W+ + P R ++ I + W G +L Sbjct: 246 TGTFSAVNRSPDGRYVA-VSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWL 304 Query: 580 TAKFDGTF 603 + G + Sbjct: 305 LVRGGGLY 312
>MATK_HORVU (P17158) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORVD (Q76LM0) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORSP (Q76LL9) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORSA (Q85ZS9) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORML (Q85BR7) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORLE (Q85ZU4) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORJU (Q85ZU5) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>MATK_HORBU (Q85ZV6) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 294 WQCCIREIWCHFFFLWCLP*RFYWSVDSGGCSSWFFY*AS 413 W+C + W ++FF W P R + + + C + Y +S Sbjct: 301 WKCYLINFWQYYFFFWTQPRRIHINQLANSCFDFMGYLSS 340
>DMXL2_MOUSE (Q8BPN8) DMX-like-2 protein (Rabconnectin-3) (Fragment)| Length = 1485 Score = 30.4 bits (67), Expect = 5.1 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +1 Query: 535 SISLVRWSPSGDYFLTA-KFDGTFHLWETNT-WTS 633 S+ L+ WSP G+YF TA K D +W T W S Sbjct: 171 SVHLMEWSPDGEYFATAGKDDCLLKVWYPMTGWKS 205
>YD83_SCHPO (Q10408) Hypothetical protein C1F3.03 in chromosome I| Length = 1004 Score = 30.4 bits (67), Expect = 5.1 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 Query: 547 VRWSPSGDYFLTAKFDGTFHLWETN 621 + WSP GD+F++ D TF W+ + Sbjct: 252 IEWSPWGDHFVSYYTDSTFAFWDVD 276
>WDR16_HUMAN (Q8N1V2) WD-repeat protein 16 (WD40-repeat protein up-regulated in| HCC) Length = 620 Score = 30.4 bits (67), Expect = 5.1 Identities = 37/187 (19%), Positives = 77/187 (41%), Gaps = 19/187 (10%) Frame = +1 Query: 112 FVSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASY 291 F+ G ++ ++ +D KE+ T H VK I + + ++ A K I +W S Sbjct: 305 FLVGTEESHIYRVSFTDFKETLIATC-HFDAVKDIVFPFGTAELFATCAKKDIRVWHTSS 363 Query: 292 PGNVASV----------------KSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSAL 423 + + KS +++ + G + L+ V+ + V+A+ Sbjct: 364 NRELLRITVPNMTCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIGVTAI 423 Query: 424 CWKPDGRYLASASCNGQSFTIWDV---SEGLGTPIRRGLSSISLVRWSPSGDYFLTAKFD 594 D + + S G+ +W + ++ L ++ SS+S +R + + +TA D Sbjct: 424 ATTSDCKRVISGGGEGE-VRVWQIGCQTQKLEEALKEHKSSVSCIRVKRNNEECVTASTD 482 Query: 595 GTFHLWE 615 GT +W+ Sbjct: 483 GTCIIWD 489
>UTP18_YEAST (P40362) U3 small nucleolar RNA-associated protein 18 (U3| snoRNA-associated protein 18) Length = 594 Score = 30.4 bits (67), Expect = 5.1 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQS------------FTIWDVSEGLGTPIRRGLSSISL 546 T +S L + PDG+ L AS + F+ W S GTP L ++ Sbjct: 515 TTTISNLQFSPDGQILCMASRAVKDALRLVHLPSCSVFSNWPTS---GTP----LGKVTS 567 Query: 547 VRWSPSGDYFLTAKFDGTFHLWETN 621 V +SPSG G LW+ N Sbjct: 568 VAFSPSGGLLAVGNEQGKVRLWKLN 592
>GBLP_TRYBR (P69104) Guanine nucleotide-binding protein beta subunit-like| protein (Activated protein kinase C receptor homolog) (Track) Length = 318 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = +1 Query: 391 RGSSTELVSALCWKP--DGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSP 561 RG+ T+ VS + + P D + S + +WD++ G L T ++ + ++ V SP Sbjct: 148 RGAHTDWVSCVRFSPSLDAPVIVSGGWDNL-VKVWDLATGRLVTDLKGHTNYVTSVTVSP 206 Query: 562 SGDYFLTAKFDGTFHLWE 615 G ++ DG LW+ Sbjct: 207 DGSLCASSDKDGVARLWD 224
>GBLP_TRYBB (P69103) Guanine nucleotide-binding protein beta subunit-like| protein (Activated protein kinase C receptor homolog) Length = 318 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = +1 Query: 391 RGSSTELVSALCWKP--DGRYLASASCNGQSFTIWDVSEG-LGTPIRRGLSSISLVRWSP 561 RG+ T+ VS + + P D + S + +WD++ G L T ++ + ++ V SP Sbjct: 148 RGAHTDWVSCVRFSPSLDAPVIVSGGWDNL-VKVWDLATGRLVTDLKGHTNYVTSVTVSP 206 Query: 562 SGDYFLTAKFDGTFHLWE 615 G ++ DG LW+ Sbjct: 207 DGSLCASSDKDGVARLWD 224
>MIP1_SCHPO (P87141) WD-repeat protein mip1| Length = 1313 Score = 30.4 bits (67), Expect = 5.1 Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 30/172 (17%) Frame = +1 Query: 214 IEWRPNSGKMIAVGCKGGICLWSAS-------YPGNVASVKSGVTSSSFG---------- 342 + W+ N G ++ G I +W AS P ++ + +TS G Sbjct: 1095 MSWQQNCGHLLVAGDVRVIRIWDASKEICYANLPVRSSNSITSLTSDLVGCNIIVAGFSD 1154 Query: 343 ----AFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDV--SEG 504 + + + L DV + S+E+V+ R L SAS +G+ +WD+ + Sbjct: 1155 GVLRVYDKRLPARDSLTDVWKEHSSEIVNVEMQSSGMRELISASSDGE-VKLWDIRMNHS 1213 Query: 505 LGT--PIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWET-----NTWTSEP 639 L T GL+S+++ +P + T + + +W+T NT+ P Sbjct: 1214 LQTFSTDNSGLTSLTVHSHAP---VYATGSSNQSIKIWDTLGQNINTFRENP 1262
>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)| Length = 3036 Score = 30.4 bits (67), Expect = 5.1 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +1 Query: 535 SISLVRWSPSGDYFLTA-KFDGTFHLWETNT-WTS 633 S+ L+ WSP G+YF TA K D +W T W S Sbjct: 171 SVHLMEWSPDGEYFATAGKDDCLLKVWYPMTGWKS 205
>PK1IP_BOVIN (Q5EA99) p21-activated protein kinase-interacting protein 1| (PAK1-interacting protein 1) Length = 392 Score = 30.4 bits (67), Expect = 5.1 Identities = 32/155 (20%), Positives = 56/155 (36%) Frame = +1 Query: 115 VSGKDQVTVHDFEDSDGKESCSLTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYP 294 V+G T+H + D K H + +++ N +I+ G IC+W A Sbjct: 56 VTGSKDETIHIY-DMKKKVDHGALMHHNGTITCLKFHGNR-HLISGAEDGLICVWDAR-- 111 Query: 295 GNVASVKSGVTSSSFGAFPRGSTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQ 474 +W + +R V+ L P GR S + + Sbjct: 112 ------------------------RWECLKSIRAHKGH-VTFLSIHPSGRLALSVGTD-K 145 Query: 475 SFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFL 579 + W++ EG I+ S +V WSP G+ ++ Sbjct: 146 TLRTWNLVEGRSAFIKNIKQSAHIVEWSPKGEKYV 180
>MSI5_ARATH (Q9SU78) WD-40 repeat protein MSI5| Length = 487 Score = 30.4 bits (67), Expect = 5.1 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 6/94 (6%) Frame = +1 Query: 34 PSCNPKLLEEFDTKKVSWNPHKHCLAFVSGKDQVTVHDFE----DSDGKESCSLTSE-HQ 198 P+ + + D V WNPH + L D TV F+ S+G S E H+ Sbjct: 308 PAMKVEKAHDADLHCVDWNPHDNNLILTGSADN-TVRVFDRRNLTSNGVGSPVYKFEGHR 366 Query: 199 KEVKAIEWRPNSGKMIAVGCKGGIC-LWSASYPG 297 V ++W P+ + + G+ +W G Sbjct: 367 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVG 400
>TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-associated| protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog) Length = 2627 Score = 30.4 bits (67), Expect = 5.1 Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 23/175 (13%) Frame = +1 Query: 193 HQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVASV-KSGVTSSSFGAFPRGS--- 360 H V+A SG M+ G + LW + + +S ++ P GS Sbjct: 2237 HSGPVRAAAVSETSGLMLTASEDGSVRLWQVPKEADDTCIPRSSAAVTAVAWAPDGSMAV 2296 Query: 361 ----TGQWILVDVLRGSSTEL----VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTP 516 G+ IL + +T + AL W + ++ + + W V G+ Sbjct: 2297 SGNQAGELILWQEAKAVATAQAPGHIGALIWSSAHTFFVLSA--DEKISEWQVKLRKGSA 2354 Query: 517 -----------IRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSS 648 ++ L ++ + W+P G + + AK D + SE WSS Sbjct: 2355 PGNLSLHLNRILQEDLGVLTSLDWAPDGHFLILAKADLKLLCMKPGDAPSEIWSS 2409
>PK1IP_XENLA (Q68FJ6) p21-activated protein kinase-interacting protein 1-like| (PAK1-interacting protein 1-like) Length = 363 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/79 (22%), Positives = 36/79 (45%) Frame = +1 Query: 358 STGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSS 537 +T +W + +++S L P G+ S + ++ W++ EG I+ + Sbjct: 107 NTKKWECQQTFKAHKGQVLS-LSIHPSGKLALSVGTD-KTLRTWNLVEGRSAFIKNIKKN 164 Query: 538 ISLVRWSPSGDYFLTAKFD 594 +V WSPSG+ ++ D Sbjct: 165 AHIVHWSPSGEKYVVVIHD 183
>WDR31_HUMAN (Q8NA23) WD-repeat protein 31| Length = 367 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +1 Query: 409 LVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVR---WSPSGDYFL 579 +V+ L PD L + S + +WDV G + R S ++V W P Y L Sbjct: 148 VVTGLAVSPDSSQLCTGS-RDNTLLLWDVVTGQS--VERASVSRNVVTHLCWVPREPYIL 204 Query: 580 TAKFDGTFHLWET 618 D T LW++ Sbjct: 205 QTSEDKTLRLWDS 217
>WDR12_MOUSE (Q9JJA4) WD-repeat protein 12 (YTM1 homolog)| Length = 423 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/74 (25%), Positives = 31/74 (41%) Frame = +1 Query: 403 TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPIRRGLSSISLVRWSPSGDYFLT 582 TE +S++ W D + SAS + + +WDV G G + + +SP + Sbjct: 257 TEAISSVLWS-DAEEICSASWD-HTIRVWDVESGGLKSTLTGNKVFNCISYSPLCKRLAS 314 Query: 583 AKFDGTFHLWETNT 624 D LW+ T Sbjct: 315 GSTDRHIRLWDPRT 328
>PLB1_YEAST (P39105) Lysophospholipase 1 precursor (EC 3.1.1.5) (Phospholipase| B 1) Length = 664 Score = 30.0 bits (66), Expect = 6.6 Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Frame = +1 Query: 229 NSGKM--IAVGCKGGICLWSASYPGNVASVKS---GVTSSSFGAFPRGSTGQWILVDVLR 393 NS M IAV C GG S G +A++ + G G +G+T L Sbjct: 92 NSSNMPKIAVACSGGGYRAMLSGAGMLAAMDNRTDGANEHGLGGLLQGAT-------YLA 144 Query: 394 GSS--TELVSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTP 516 G S L S L W A +S +IWD+S + TP Sbjct: 145 GLSGGNWLTSTLAWNNWTSVQAIVDNTTESNSIWDISHSILTP 187
>POP3_SCHPO (O74184) WD-repeat protein pop3 (WD-repeat protein wat1)| Length = 314 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +1 Query: 412 VSALCWKPDGRYLASASCNGQSFTIWDVSEGLGTPI---RRGLSSISLVRWSPSGDYFLT 582 V+ LC PD ++LA+A ++D++ P+ ++++ + + G + T Sbjct: 43 VNRLCISPDKKFLAAA--GNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLAT 100 Query: 583 AKFDGTFHLWE 615 + DGT +W+ Sbjct: 101 SSEDGTVKVWD 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.132 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,433,525 Number of Sequences: 219361 Number of extensions: 2183624 Number of successful extensions: 7562 Number of sequences better than 10.0: 273 Number of HSP's better than 10.0 without gapping: 6395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7251 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
