ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC156936.5| Mus musculus BAC clone RP24-90K8 from chromosome ... 44 0.51
2gb|AE006813.1| Sulfolobus solfataricus P2 section 172 of 272 of ... 44 0.51
3gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosom... 44 0.51
4emb|BX908774.13| Zebrafish DNA sequence from clone CH211-103A8 i... 44 0.51
5gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete se... 44 0.51
6emb|Y08256.1|SS100KBFR S.solfataricus 100 kbp DNA fragment 44 0.51
7emb|BX005166.14| Zebrafish DNA sequence from clone CH211-137K18 ... 44 0.51
8emb|AJ250315.1|PHY250315 Petunia hybrida mRNA for CYCB1-1 protei... 42 2.0
9gb|AC079285.1|AC079285 Arabidopsis thaliana chromosome 1 BAC T12... 42 2.0
10gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, comple... 42 2.0
11gb|AC108768.14| Mus musculus chromosome 8, clone RP23-398L15, co... 40 8.0
12gb|AC163680.2| Mus musculus BAC clone RP24-111M15 from chromosom... 40 8.0
13gb|AC099641.8| Mus musculus chromosome 1, clone RP24-342C13, com... 40 8.0
14gb|AC132889.10| Mus musculus chromosome 5, clone RP24-267K12, co... 40 8.0
15gb|AC154907.3| Mus musculus BAC clone RP23-312K18 from chromosom... 40 8.0
16gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosom... 40 8.0
17gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, co... 40 8.0
18gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome... 40 8.0
19gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, com... 40 8.0
20emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chro... 40 8.0
21gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, comp... 40 8.0
22ref|XM_796961.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
23ref|XM_775413.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
24ref|XM_796925.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
25ref|XM_796898.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
26ref|XM_796867.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
27ref|XM_797007.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
28ref|XM_796998.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
29ref|XM_796985.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
30ref|XM_796973.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
31ref|XM_796960.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
32ref|XM_775411.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
33ref|XM_796922.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
34ref|XM_796895.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
35ref|XM_796865.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
36ref|XM_796823.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
37ref|XM_796774.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
38ref|XM_790024.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
39emb|AL135797.10| Human DNA sequence from clone GS1-77J13 on chro... 40 8.0
40gb|AC158588.3| Mus musculus chromosome 5, clone RP24-372I18, com... 40 8.0
41ref|XM_794117.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
42gb|AC002088.2| Homo sapiens BAC clone CTB-13P7 from 7p15-p21, co... 40 8.0
43gb|AC016450.10| Homo sapiens chromosome 11, clone RP11-361K15, c... 40 8.0
44gb|AC068107.6| Homo sapiens chromosome 11, clone RP11-807F21, co... 40 8.0
45emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in... 40 8.0
46gb|AC163028.5| Mus musculus chromosome 1, clone RP23-393I22, com... 40 8.0
47gb|AC154914.3| Pan troglodytes BAC clone RP43-172A19 from chromo... 40 8.0
48emb|BX088582.4| Zebrafish DNA sequence from clone CH211-188B17 i... 40 8.0
49emb|BX005248.13| Zebrafish DNA sequence from clone CH211-155H12 ... 40 8.0
50emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 40 8.0
51emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p1... 40 8.0
52gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, co... 40 8.0
53gb|AC005622.1|AC005622 Homo sapiens chromosome 19, cosmid R30953... 40 8.0
54gb|AC132299.3| Mus musculus BAC clone RP24-336N1 from 1, complet... 40 8.0 
>gb|AC156936.5| Mus musculus BAC clone RP24-90K8 from chromosome 14, complete sequence
          Length = 203649

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 415   ttgttctgtatgttcagagtat 436
             ||||||||||||||||||||||
Sbjct: 96809 ttgttctgtatgttcagagtat 96788
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>gb|AE006813.1| Sulfolobus solfataricus P2 section 172 of 272 of the complete genome
          Length = 13260

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 262   gatgatacaccagggtgtacaa 283
             ||||||||||||||||||||||
Sbjct: 12743 gatgatacaccagggtgtacaa 12722
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>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete
             sequence
          Length = 200350

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 415   ttgttctgtatgttcagagtat 436
             ||||||||||||||||||||||
Sbjct: 12727 ttgttctgtatgttcagagtat 12748
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>emb|BX908774.13| Zebrafish DNA sequence from clone CH211-103A8 in linkage group 3,
              complete sequence
          Length = 165773

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 368    tacttgctctgtatgttcagag 389
              ||||||||||||||||||||||
Sbjct: 117086 tacttgctctgtatgttcagag 117065



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 511    tacttgctctgtatgttcagag 532
              ||||||||||||||||||||||
Sbjct: 117086 tacttgctctgtatgttcagag 117065
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>gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete sequence
          Length = 147669

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 468    aaagtatgatttgcttggctttcgaa 493
              ||||||||||||||||| ||||||||
Sbjct: 133633 aaagtatgatttgcttgcctttcgaa 133608



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 325    aaagtatgatttgcttggctttcgaa 350
              ||||||||||||||||| ||||||||
Sbjct: 133633 aaagtatgatttgcttgcctttcgaa 133608
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>emb|Y08256.1|SS100KBFR S.solfataricus 100 kbp DNA fragment
          Length = 100389

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 262 gatgatacaccagggtgtacaa 283
           ||||||||||||||||||||||
Sbjct: 31  gatgatacaccagggtgtacaa 10
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>emb|BX005166.14| Zebrafish DNA sequence from clone CH211-137K18 in linkage group 3,
              complete sequence
          Length = 178013

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 511    tacttgctctgtatgttcagag 532
              ||||||||||||||||||||||
Sbjct: 123118 tacttgctctgtatgttcagag 123097



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 368    tacttgctctgtatgttcagag 389
              ||||||||||||||||||||||
Sbjct: 123118 tacttgctctgtatgttcagag 123097
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>emb|AJ250315.1|PHY250315 Petunia hybrida mRNA for CYCB1-1 protein (CycB1-1 gene)
          Length = 1821

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 89   aagctcaaggccatctacaggaagt 113
            ||||||||||| |||||||||||||
Sbjct: 1432 aagctcaaggcaatctacaggaagt 1456
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>gb|AC079285.1|AC079285 Arabidopsis thaliana chromosome 1 BAC T12I7 genomic sequence, complete
             sequence
          Length = 35308

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    gtaaattctctctgttgttgg 32
             |||||||||||||||||||||
Sbjct: 10779 gtaaattctctctgttgttgg 10799
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>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence
          Length = 217058

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    agagcaagctcaaggccatct 104
             |||||||||||||||||||||
Sbjct: 81280 agagcaagctcaaggccatct 81260
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>gb|AC108768.14| Mus musculus chromosome 8, clone RP23-398L15, complete sequence
          Length = 209808

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    tgttcagagtatgttcattc 444
              ||||||||||||||||||||
Sbjct: 120102 tgttcagagtatgttcattc 120121
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>gb|AC163680.2| Mus musculus BAC clone RP24-111M15 from chromosome 8, complete sequence
          Length = 207917

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    tctgcttttaggatttgctg 217
              ||||||||||||||||||||
Sbjct: 159651 tctgcttttaggatttgctg 159670
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>gb|AC099641.8| Mus musculus chromosome 1, clone RP24-342C13, complete sequence
          Length = 188523

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    atatattcattcatatgttt 309
              ||||||||||||||||||||
Sbjct: 131452 atatattcattcatatgttt 131471
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>gb|AC132889.10| Mus musculus chromosome 5, clone RP24-267K12, complete sequence
          Length = 168641

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     aggccatctacaggaagtac 115
              ||||||||||||||||||||
Sbjct: 123203 aggccatctacaggaagtac 123184
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>gb|AC154907.3| Mus musculus BAC clone RP23-312K18 from chromosome 8, complete sequence
          Length = 182534

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   tctgcttttaggatttgctg 217
             ||||||||||||||||||||
Sbjct: 47725 tctgcttttaggatttgctg 47744
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>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete sequence
          Length = 191036

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    attcattcatatgtttgaat 313
              ||||||||||||||||||||
Sbjct: 128227 attcattcatatgtttgaat 128208
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>gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, complete sequence
          Length = 172228

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    atacactagactatttgttc 420
              ||||||||||||||||||||
Sbjct: 137287 atacactagactatttgttc 137268
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>gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome 17, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aggccatctacaggaagtac 115
             ||||||||||||||||||||
Sbjct: 18521 aggccatctacaggaagtac 18540
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>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence
          Length = 191038

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aggccatctacaggaagtac 115
             ||||||||||||||||||||
Sbjct: 87369 aggccatctacaggaagtac 87388
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>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete
              sequence
          Length = 220233

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    attcattcatatgtttgaat 313
              ||||||||||||||||||||
Sbjct: 181452 attcattcatatgtttgaat 181471
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>gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, complete sequence
          Length = 149599

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 416    tgttctgtatgttcagagtatgttcatt 443
              ||||||||||||||| | ||||||||||
Sbjct: 114571 tgttctgtatgttcatattatgttcatt 114544
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>ref|XM_796961.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal (vacuolar proton pump) noncat,
           transcript variant 5 (LOC576071), mRNA
          Length = 1966

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 426 gcaagctcaaggccatctac 445
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>ref|XM_775413.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal (vacuolar proton pump) noncat,
           transcript variant 1 (LOC576071), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 426 gcaagctcaaggccatctac 445
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>ref|XM_796925.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal (vacuolar proton pump) noncat,
           transcript variant 4 (LOC576071), mRNA
          Length = 1948

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 426 gcaagctcaaggccatctac 445
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>ref|XM_796898.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal (vacuolar proton pump) noncat,
           transcript variant 3 (LOC576071), mRNA
          Length = 1993

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 426 gcaagctcaaggccatctac 445
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>ref|XM_796867.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal (vacuolar proton pump) noncat,
           transcript variant 2 (LOC576071), mRNA
          Length = 1900

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 426 gcaagctcaaggccatctac 445
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>ref|XM_797007.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
            transporting, lysosomal V0 subunit a isoform 1,
            transcript variant 11 (LOC578518), mRNA
          Length = 1554

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   gcaagctcaaggccatctac 106
            ||||||||||||||||||||
Sbjct: 983  gcaagctcaaggccatctac 1002
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>ref|XM_796998.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 10 (LOC578518), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 893 gcaagctcaaggccatctac 912
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>ref|XM_796985.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 9 (LOC578518), mRNA
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 908 gcaagctcaaggccatctac 927
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>ref|XM_796973.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 8 (LOC578518), mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 950 gcaagctcaaggccatctac 969
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>ref|XM_796960.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 7 (LOC578518), mRNA
          Length = 1458

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 887 gcaagctcaaggccatctac 906
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>ref|XM_775411.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 1 (LOC578518), mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 902 gcaagctcaaggccatctac 921
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>ref|XM_796922.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 6 (LOC578518), mRNA
          Length = 1458

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 887 gcaagctcaaggccatctac 906
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>ref|XM_796895.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 5 (LOC578518), mRNA
          Length = 1470

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 899 gcaagctcaaggccatctac 918
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>ref|XM_796865.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 4 (LOC578518), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 890 gcaagctcaaggccatctac 909
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>ref|XM_796823.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 3 (LOC578518), mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 857 gcaagctcaaggccatctac 876
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>ref|XM_796774.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1,
           transcript variant 2 (LOC578518), mRNA
          Length = 1506

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 935 gcaagctcaaggccatctac 954
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>ref|XM_790024.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+
           transporting, lysosomal V0 subunit a isoform 1
           (LOC590419), partial mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 893 gcaagctcaaggccatctac 912
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>emb|AL135797.10| Human DNA sequence from clone GS1-77J13 on chromosome 1 Contains part
            of the gene for hemicentin, complete sequence
          Length = 41219

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  atgttcattcatatgtttga 454
            ||||||||||||||||||||
Sbjct: 8151 atgttcattcatatgtttga 8132
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>gb|AC158588.3| Mus musculus chromosome 5, clone RP24-372I18, complete sequence
          Length = 179677

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    atacactagactatttgttc 420
              ||||||||||||||||||||
Sbjct: 131336 atacactagactatttgttc 131355
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>ref|XM_794117.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1709-PE,
           isoform E (LOC594684), partial mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcaagctcaaggccatctac 106
           ||||||||||||||||||||
Sbjct: 395 gcaagctcaaggccatctac 414
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>gb|AC002088.2| Homo sapiens BAC clone CTB-13P7 from 7p15-p21, complete sequence
          Length = 85633

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   cttgctctgtatgttcagagtatg 536
             |||||||||||| |||||||||||
Sbjct: 56558 cttgctctgtattttcagagtatg 56535



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 370   cttgctctgtatgttcagagtatg 393
             |||||||||||| |||||||||||
Sbjct: 56558 cttgctctgtattttcagagtatg 56535
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>gb|AC016450.10| Homo sapiens chromosome 11, clone RP11-361K15, complete sequence
          Length = 187449

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   aatatattcattcatatgtttgaa 312
             ||||||||||||||| ||||||||
Sbjct: 53896 aatatattcattcatgtgtttgaa 53919
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>gb|AC068107.6| Homo sapiens chromosome 11, clone RP11-807F21, complete sequence
          Length = 177969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 289    aatatattcattcatatgtttgaa 312
              ||||||||||||||| ||||||||
Sbjct: 105134 aatatattcattcatgtgtttgaa 105111
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>emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in linkage group 3,
              complete sequence
          Length = 155448

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 434    tatgttcattcatatgtttgaatc 457
              ||||||||||||||| ||||||||
Sbjct: 152711 tatgttcattcatatttttgaatc 152688
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>gb|AC163028.5| Mus musculus chromosome 1, clone RP23-393I22, complete sequence
          Length = 206399

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    atatattcattcatatgttt 309
              ||||||||||||||||||||
Sbjct: 137540 atatattcattcatatgttt 137521
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>gb|AC154914.3| Pan troglodytes BAC clone RP43-172A19 from chromosome 7, complete
             sequence
          Length = 154883

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 370   cttgctctgtatgttcagagtatg 393
             |||||||||||| |||||||||||
Sbjct: 84038 cttgctctgtattttcagagtatg 84015



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   cttgctctgtatgttcagagtatg 536
             |||||||||||| |||||||||||
Sbjct: 84038 cttgctctgtattttcagagtatg 84015
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>emb|BX088582.4| Zebrafish DNA sequence from clone CH211-188B17 in linkage group 15,
             complete sequence
          Length = 155363

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    ttctctctgttgttggtttcaggg 40
             ||||||||||||||| ||||||||
Sbjct: 22488 ttctctctgttgttgttttcaggg 22465
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>emb|BX005248.13| Zebrafish DNA sequence from clone CH211-155H12 in linkage group 8,
              complete sequence
          Length = 185135

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    tatttgttgtcttcagtgta 574
              ||||||||||||||||||||
Sbjct: 170602 tatttgttgtcttcagtgta 170621
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>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
              complete sequence
          Length = 236784

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    aatatattcattcatatgtt 308
              ||||||||||||||||||||
Sbjct: 185421 aatatattcattcatatgtt 185402
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>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE
          Length = 125647

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   tcgacttcattcaaagtatg 332
             ||||||||||||||||||||
Sbjct: 83549 tcgacttcattcaaagtatg 83530



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   tcgacttcattcaaagtatg 475
             ||||||||||||||||||||
Sbjct: 83549 tcgacttcattcaaagtatg 83530
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>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence
          Length = 185278

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    attcattcatatgtttgaat 313
              ||||||||||||||||||||
Sbjct: 123595 attcattcatatgtttgaat 123576
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>gb|AC005622.1|AC005622 Homo sapiens chromosome 19, cosmid R30953, complete sequence
          Length = 41311

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  tatgttcagagtatgttcat 442
            ||||||||||||||||||||
Sbjct: 9336 tatgttcagagtatgttcat 9317
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>gb|AC132299.3| Mus musculus BAC clone RP24-336N1 from 1, complete sequence
          Length = 148456

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    atatattcattcatatgttt 309
              ||||||||||||||||||||
Sbjct: 119206 atatattcattcatatgttt 119225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,241,097
Number of Sequences: 3902068
Number of extensions: 5241097
Number of successful extensions: 111776
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111661
Number of HSP's gapped (non-prelim): 115
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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