ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39d06 |
|---|---|
| Clone Library Name | barley_pub |
>STI1_SCHPO (Q9USI5) Heat shock protein sti1 homolog| Length = 591 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/92 (28%), Positives = 41/92 (44%) Frame = +2 Query: 218 KKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXXXX 397 K KG+ AF +KD+ AID ++Q I + + +Y+ R Y Sbjct: 6 KAKGNAAFSKKDYKTAIDYFTQAIGLDER-NHILYSNRSACYASEKDYADALKDATKCTE 64 Query: 398 IFPTWPTAFYLQAAALFSLGKENEAREALKDG 493 + P W + + AAL LG + AR A ++G Sbjct: 65 LKPDWAKGWSRKGAALHGLGDLDAARSAYEEG 96 Score = 37.0 bits (84), Expect = 0.046 Identities = 26/100 (26%), Positives = 43/100 (43%) Frame = +2 Query: 212 DSKKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXX 391 +S+ KG+ F+ DF+ AI Y++ P + R +YL P Sbjct: 401 ESRVKGNELFKSGDFANAIKEYTEMTKRAPS-DPRGFGNRAAAYLKVMAPAECIRDCNKA 459 Query: 392 XXIFPTWPTAFYLQAAALFSLGKENEAREALKDGSAVETR 511 + P + A+ +A ALF L N+ +A + S V+ R Sbjct: 460 IELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRR 499
>STIP1_RAT (O35814) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 35.4 bits (80), Expect = 0.13 Identities = 23/99 (23%), Positives = 42/99 (42%) Frame = +2 Query: 197 MQATIDSKKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXX 376 M+ + K+KG+ A + A+ CYS+ I + + +Y+ R +Y Sbjct: 1 MEQVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQ-NHVLYSNRSAAYAKKGDYQKAYE 59 Query: 377 XXXXXXXIFPTWPTAFYLQAAALFSLGKENEAREALKDG 493 + P W + +AAAL L + EA+ ++G Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEG 98
>STIP1_MOUSE (Q60864) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (mSTI1) Length = 543 Score = 35.4 bits (80), Expect = 0.13 Identities = 23/99 (23%), Positives = 42/99 (42%) Frame = +2 Query: 197 MQATIDSKKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXX 376 M+ + K+KG+ A + A+ CYS+ I + + +Y+ R +Y Sbjct: 1 MEQVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQ-NHVLYSNRSAAYAKKGDYQKAYE 59 Query: 377 XXXXXXXIFPTWPTAFYLQAAALFSLGKENEAREALKDG 493 + P W + +AAAL L + EA+ ++G Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEG 98
>STIP1_CRIGR (O54981) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 35.4 bits (80), Expect = 0.13 Identities = 23/99 (23%), Positives = 42/99 (42%) Frame = +2 Query: 197 MQATIDSKKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXX 376 M+ + K+KG+ A + A+ CYS+ I + + +Y+ R +Y Sbjct: 1 MEQVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQ-NHVLYSNRSAAYAKKGDYQKAYE 59 Query: 377 XXXXXXXIFPTWPTAFYLQAAALFSLGKENEAREALKDG 493 + P W + +AAAL L + EA+ ++G Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEG 98
>PPP5_RAT (P53042) Serine/threonine-protein phosphatase 5 (EC 3.1.3.16) (PP5)| (Protein phosphatase T) (PPT) Length = 499 Score = 35.0 bits (79), Expect = 0.18 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = +2 Query: 218 KKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXXXX 397 K + + F+ KD+ AI YSQ I++ + Y R L+YL + Sbjct: 32 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 90 Query: 398 IFPTWPTAFYLQAAALFSLGKENEAREALKDGSAV 502 + + +Y +AA+ +LGK R AL+D V Sbjct: 91 LDKKYIKGYYRRAASNMALGK---FRAALRDYETV 122
>PPP5_HUMAN (P53041) Serine/threonine-protein phosphatase 5 (EC 3.1.3.16) (PP5)| (Protein phosphatase T) (PP-T) (PPT) Length = 499 Score = 35.0 bits (79), Expect = 0.18 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = +2 Query: 218 KKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXXXX 397 K + + F+ KD+ AI YSQ I++ + Y R L+YL + Sbjct: 32 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 90 Query: 398 IFPTWPTAFYLQAAALFSLGKENEAREALKDGSAV 502 + + +Y +AA+ +LGK R AL+D V Sbjct: 91 LDKKYIKGYYRRAASNMALGK---FRAALRDYETV 122
>PPP5_MOUSE (Q60676) Serine/threonine-protein phosphatase 5 (EC 3.1.3.16) (PP5)| (Protein phosphatase T) (PPT) Length = 499 Score = 34.3 bits (77), Expect = 0.30 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = +2 Query: 218 KKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXXXX 397 K + + F+ KD+ AI YSQ I++ + Y R L+YL + Sbjct: 32 KTQANDYFKAKDYENAIKFYSQAIELNP-GNAIYYGNRSLAYLRTECYGYALGDATRAIE 90 Query: 398 IFPTWPTAFYLQAAALFSLGKENEAREALKDGSAV 502 + + +Y +AA+ +LGK R AL+D V Sbjct: 91 LDKKYIKGYYRRAASNMALGK---FRAALRDYETV 122
>STIP1_HUMAN (P31948) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (NY-REN-11 antigen) Length = 543 Score = 34.3 bits (77), Expect = 0.30 Identities = 23/99 (23%), Positives = 42/99 (42%) Frame = +2 Query: 197 MQATIDSKKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXX 376 M+ + K+KG+ A + A+ CYS+ I + + +Y+ R +Y Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59 Query: 377 XXXXXXXIFPTWPTAFYLQAAALFSLGKENEAREALKDG 493 + P W + +AAAL L + EA+ ++G Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEG 98
>TOM70_SCHPO (O14217) Probable mitochondrial import receptor subunit tom40| (Translocase of outer membrane 40 kDa subunit) Length = 625 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Frame = +2 Query: 80 AEACSRKDLTAIHEHLETAGYKDDEGTANELSFQMWTNQMQATIDSKKK--GDTAFRQKD 253 A A +K + G + A E S + T + +A + ++ K G+ A+ QK+ Sbjct: 107 AAAAKKKKKNKKKVKAKKVGDSSVDKIATEESVKSMTKEERAKLAAELKTLGNKAYGQKE 166 Query: 254 FSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXXXXIFPTWPTAFYLQ 433 ++ AID Y+Q I P ++ R Y + ++ A + Sbjct: 167 YANAIDYYTQAITCSH--DPIFFSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRR 224 Query: 434 AAALFSLGKENEA 472 +AA LGK +EA Sbjct: 225 SAAYEQLGKLDEA 237
>Y2316_MYCBO (P63503) Putative aminotransferase Mb2316 (EC 2.6.1.-)| Length = 407 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +2 Query: 410 WPTAFYLQAAALFSLGKENEAREALKDGSAVETRSKGH*RWIAEHQ--VLSFGH 565 WP YL LG ++ A + + +G AV + G RW +H LS GH Sbjct: 318 WPQGTYLAWLDCRELGFDDAASDEMTEGLAVVSDLSGPARWFLDHARVALSSGH 371
>Y2294_MYCTU (P63502) Putative aminotransferase Rv2294/MT2351 (EC 2.6.1.-)| Length = 407 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +2 Query: 410 WPTAFYLQAAALFSLGKENEAREALKDGSAVETRSKGH*RWIAEHQ--VLSFGH 565 WP YL LG ++ A + + +G AV + G RW +H LS GH Sbjct: 318 WPQGTYLAWLDCRELGFDDAASDEMTEGLAVVSDLSGPARWFLDHARVALSSGH 371
>STIP_SOYBN (Q43468) Heat shock protein STI (Stress-inducible protein) (GmSTI)| Length = 569 Score = 30.4 bits (67), Expect = 4.3 Identities = 23/95 (24%), Positives = 40/95 (42%) Frame = +2 Query: 212 DSKKKGDTAFRQKDFSMAIDCYSQFIDVGTMVSPTIYARRCLSYLMNDMPXXXXXXXXXX 391 ++K KG+ AF DF+ A+ +S I + + +Y+ R + L ++ Sbjct: 4 EAKAKGNAAFSAGDFAAAVRHFSDAIALSPS-NHVLYSNRSAATLPPEL-RGGPSRRQKT 61 Query: 392 XXIFPTWPTAFYLQAAALFSLGKENEAREALKDGS 496 + P WP A+ AA L + +A K S Sbjct: 62 VDLKPDWPKAYSRLGAAHLGLRRHRDASPPTKPAS 96
>PRH1_SCHPO (Q03319) Probable ATP-dependent RNA helicase prh1 (EC 3.6.1.-)| Length = 719 Score = 29.6 bits (65), Expect = 7.4 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +2 Query: 92 SRKDLTAIHEHLETAGYKDDEGTANELSFQMWTNQMQATIDSKKKGDTAFRQKDFSMAID 271 S++ L EHL + G DD G N+L +QM + + S + A R+ + Sbjct: 480 SKEGLLRALEHLYSIGALDDNGHINDLGYQM---SLIPLLPSLARAVLAAREH------N 530 Query: 272 CYSQFIDVGTMVS 310 C S+ IDV + +S Sbjct: 531 CLSEVIDVVSCLS 543
>OPTIX_DROME (Q95RW8) Protein Optix (Homeobox protein SIX3) (D-Six3)| Length = 487 Score = 29.3 bits (64), Expect = 9.7 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = -3 Query: 545 DVQLSIFNAPCSLSPQPNHP*VLLELRFLFLTK---IRPQPEDKMQLAM*EISPEPALHH 375 D S+F+A C L N L E+ F + +RP P+ LA+ S P LHH Sbjct: 346 DAATSLFSAGCYLQSFSN----LKEMSQQFPIQPIVLRPHPQLPQSLALNGASGGPPLHH 401 Query: 374 PELVVA 357 P A Sbjct: 402 PAYAAA 407 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,618,740 Number of Sequences: 219361 Number of extensions: 1584097 Number of successful extensions: 3468 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3413 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3462 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
