ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
3emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102... 145 2e-31
4dbj|AK064995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
5emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561... 143 9e-31
6dbj|AK064217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
7dbj|AK100699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
8ref|XM_947213.1| Theileria annulata strain Ankara pre-mRNA splic... 44 0.60
9emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in l... 42 2.4
10ref|NM_193838.1| Oryza sativa (japonica cultivar-group), predic... 40 9.4
11gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, comp... 40 9.4
12gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromo... 40 9.4
13gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosom... 40 9.4
14emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 o... 40 9.4
15gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, comple... 40 9.4
16emb|AJ250836.1|CAR250836 Cicer arietinum mRNA for phenylalanine ... 40 9.4
17gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, comp... 40 9.4
18gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, com... 40 9.4
19gb|AC115540.3| Homo sapiens BAC clone RP11-629I23 from 4, comple... 40 9.4
20gb|AC007662.3| Arabidopsis thaliana chromosome 2 BAC F9A16 genom... 40 9.4
21gb|AC006527.5| Arabidopsis thaliana chromosome 2 clone F27C21 ma... 40 9.4
22gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, compl... 40 9.4
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
24gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complet... 40 9.4
25ref|XM_218617.3| PREDICTED: Rattus norvegicus myosin, heavy poly... 40 9.4
26dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
27dbj|BS000015.1| Pan troglodytes chromosome 22 clone:PTB-017F24, ... 40 9.4
28dbj|AP000929.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.4
29dbj|AP003781.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.4

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  145 bits (73), Expect = 2e-31
 Identities = 151/177 (85%)
 Strand = Plus / Minus

                                                                           
Query: 455     ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 514
               ||||||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||
Sbjct: 5047818 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaaat 5047759

                                                                           
Query: 515     ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 574
               | ||  || | | ||  ||||| ||||||| | ||  ||||| |||  ||||||||||||
Sbjct: 5047758 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 5047699

                                                                        
Query: 575     aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggag 631
               ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 5047698 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggag 5047642



 Score =  143 bits (72), Expect = 9e-31
 Identities = 171/204 (83%)
 Strand = Plus / Minus

                                                                           
Query: 482     actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 541
               ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 5037940 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 5037881

                                                                           
Query: 542     gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 601
               ||||| ||| ||||| |||| ||||| | ||||||||||||||  | ||| ||||  |||
Sbjct: 5037880 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 5037821

                                                                           
Query: 602     agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 661
               || |||||||||   ||  | ||||| ||| | |||||||||||| |||| || ||||||
Sbjct: 5037820 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 5037761

                                       
Query: 662     tctggtgagcaatttgggaaatgg 685
               ||||| || |||||| ||||||||
Sbjct: 5037760 tctggcgaacaatttaggaaatgg 5037737



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                           
Query: 199     agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 258
               |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| ||||
Sbjct: 5038235 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 5038176

                          
Query: 259     tcctgaaagca 269
               | |||||||||
Sbjct: 5038175 tactgaaagca 5038165



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 132/164 (80%)
 Strand = Plus / Minus

                                                                           
Query: 106     tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 165
               ||||| |||||||| |||||||||||| ||||||| ||| ||| ||    ||||||  ||
Sbjct: 5048401 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 5048342

                                                                           
Query: 166     gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 225
               |  ||||||| || | |||||||||||    |||||||||||| |||| || ||||||||
Sbjct: 5048341 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 5048282

                                                           
Query: 226     ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 269
               || |||||||| | ||| | ||||| |||||||| |||| ||||
Sbjct: 5048281 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 5048238



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                           
Query: 195     acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 254
               |||||||||||||| || | || |||||||| | ||||||||   ||||| ||||| |||
Sbjct: 5048180 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 5048121

                                          
Query: 255     ctggtcctgaaagcagcaaggatgatg 281
               |||   || |||||| |||||||||||
Sbjct: 5048120 ctgactctcaaagcaacaaggatgatg 5048094



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 384     catctgagaaaagttttgagactcgcaaaa 413
               |||||||||||| |||||||||||| ||||
Sbjct: 5047889 catctgagaaaaattttgagactcgaaaaa 5047860



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  145 bits (73), Expect = 2e-31
 Identities = 151/177 (85%)
 Strand = Plus / Minus

                                                                           
Query: 455     ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 514
               ||||||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||
Sbjct: 5047800 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaaat 5047741

                                                                           
Query: 515     ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 574
               | ||  || | | ||  ||||| ||||||| | ||  ||||| |||  ||||||||||||
Sbjct: 5047740 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 5047681

                                                                        
Query: 575     aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggag 631
               ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 5047680 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggag 5047624



 Score =  143 bits (72), Expect = 9e-31
 Identities = 171/204 (83%)
 Strand = Plus / Minus

                                                                           
Query: 482     actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 541
               ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 5037922 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 5037863

                                                                           
Query: 542     gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 601
               ||||| ||| ||||| |||| ||||| | ||||||||||||||  | ||| ||||  |||
Sbjct: 5037862 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 5037803

                                                                           
Query: 602     agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 661
               || |||||||||   ||  | ||||| ||| | |||||||||||| |||| || ||||||
Sbjct: 5037802 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 5037743

                                       
Query: 662     tctggtgagcaatttgggaaatgg 685
               ||||| || |||||| ||||||||
Sbjct: 5037742 tctggcgaacaatttaggaaatgg 5037719



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                           
Query: 199     agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 258
               |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| ||||
Sbjct: 5038217 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 5038158

                          
Query: 259     tcctgaaagca 269
               | |||||||||
Sbjct: 5038157 tactgaaagca 5038147



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 132/164 (80%)
 Strand = Plus / Minus

                                                                           
Query: 106     tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 165
               ||||| |||||||| |||||||||||| ||||||| ||| ||| ||    ||||||  ||
Sbjct: 5048383 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 5048324

                                                                           
Query: 166     gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 225
               |  ||||||| || | |||||||||||    |||||||||||| |||| || ||||||||
Sbjct: 5048323 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 5048264

                                                           
Query: 226     ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 269
               || |||||||| | ||| | ||||| |||||||| |||| ||||
Sbjct: 5048263 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 5048220



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                           
Query: 195     acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 254
               |||||||||||||| || | || |||||||| | ||||||||   ||||| ||||| |||
Sbjct: 5048162 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 5048103

                                          
Query: 255     ctggtcctgaaagcagcaaggatgatg 281
               |||   || |||||| |||||||||||
Sbjct: 5048102 ctgactctcaaagcaacaaggatgatg 5048076



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 384     catctgagaaaagttttgagactcgcaaaa 413
               |||||||||||| |||||||||||| ||||
Sbjct: 5047871 catctgagaaaaattttgagactcgaaaaa 5047842



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>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112231

 Score =  145 bits (73), Expect = 2e-31
 Identities = 151/177 (85%)
 Strand = Plus / Minus

                                                                         
Query: 455   ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 514
             ||||||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||
Sbjct: 18471 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaaat 18412

                                                                         
Query: 515   ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 574
             | ||  || | | ||  ||||| ||||||| | ||  ||||| |||  ||||||||||||
Sbjct: 18411 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 18352

                                                                      
Query: 575   aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggag 631
             ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 18351 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggag 18295



 Score =  143 bits (72), Expect = 9e-31
 Identities = 171/204 (83%)
 Strand = Plus / Minus

                                                                        
Query: 482  actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 541
            ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 8593 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 8534

                                                                        
Query: 542  gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 601
            ||||| ||| ||||| |||| ||||| | ||||||||||||||  | ||| ||||  |||
Sbjct: 8533 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 8474

                                                                        
Query: 602  agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 661
            || |||||||||   ||  | ||||| ||| | |||||||||||| |||| || ||||||
Sbjct: 8473 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 8414

                                    
Query: 662  tctggtgagcaatttgggaaatgg 685
            ||||| || |||||| ||||||||
Sbjct: 8413 tctggcgaacaatttaggaaatgg 8390



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 199  agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 258
            |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| ||||
Sbjct: 8888 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 8829

                       
Query: 259  tcctgaaagca 269
            | |||||||||
Sbjct: 8828 tactgaaagca 8818



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 132/164 (80%)
 Strand = Plus / Minus

                                                                         
Query: 106   tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 165
             ||||| |||||||| |||||||||||| ||||||| ||| ||| ||    ||||||  ||
Sbjct: 19054 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 18995

                                                                         
Query: 166   gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 225
             |  ||||||| || | |||||||||||    |||||||||||| |||| || ||||||||
Sbjct: 18994 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 18935

                                                         
Query: 226   ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 269
             || |||||||| | ||| | ||||| |||||||| |||| ||||
Sbjct: 18934 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 18891



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                         
Query: 195   acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 254
             |||||||||||||| || | || |||||||| | ||||||||   ||||| ||||| |||
Sbjct: 18833 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 18774

                                        
Query: 255   ctggtcctgaaagcagcaaggatgatg 281
             |||   || |||||| |||||||||||
Sbjct: 18773 ctgactctcaaagcaacaaggatgatg 18747



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 384   catctgagaaaagttttgagactcgcaaaa 413
             |||||||||||| |||||||||||| ||||
Sbjct: 18542 catctgagaaaaattttgagactcgaaaaa 18513



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>dbj|AK064995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D20, full
           insert sequence
          Length = 2181

 Score =  143 bits (72), Expect = 9e-31
 Identities = 171/204 (83%)
 Strand = Plus / Plus

                                                                       
Query: 482 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 541
           ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 680 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 739

                                                                       
Query: 542 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 601
           ||||| ||| ||||| |||| ||||| | ||||||||||||||  | ||| ||||  |||
Sbjct: 740 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 799

                                                                       
Query: 602 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 661
           || |||||||||   ||  | ||||| ||| | |||||||||||| |||| || ||||||
Sbjct: 800 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 859

                                   
Query: 662 tctggtgagcaatttgggaaatgg 685
           ||||| || |||||| ||||||||
Sbjct: 860 tctggcgaacaatttaggaaatgg 883



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 199 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 258
           |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| ||||
Sbjct: 385 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 444

                      
Query: 259 tcctgaaagca 269
           | |||||||||
Sbjct: 445 tactgaaagca 455



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>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91053

 Score =  143 bits (72), Expect = 9e-31
 Identities = 171/204 (83%)
 Strand = Plus / Minus

                                                                         
Query: 482   actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 541
             ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 81314 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 81255

                                                                         
Query: 542   gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 601
             ||||| ||| ||||| |||| ||||| | ||||||||||||||  | ||| ||||  |||
Sbjct: 81254 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 81195

                                                                         
Query: 602   agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 661
             || |||||||||   ||  | ||||| ||| | |||||||||||| |||| || ||||||
Sbjct: 81194 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 81135

                                     
Query: 662   tctggtgagcaatttgggaaatgg 685
             ||||| || |||||| ||||||||
Sbjct: 81134 tctggcgaacaatttaggaaatgg 81111



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 199   agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 258
             |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| ||||
Sbjct: 81609 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 81550

                        
Query: 259   tcctgaaagca 269
             | |||||||||
Sbjct: 81549 tactgaaagca 81539



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 593   aagctccacagggaattggctgcattgctcgaagaggag 631
             ||||| ||||| |||||||||||||| || |||||||||
Sbjct: 91053 aagcttcacagagaattggctgcattactggaagaggag 91015



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>dbj|AK064217.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-F07, full
           insert sequence
          Length = 1556

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Plus

                                                                       
Query: 482 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 541
           ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 680 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 739

                                                                       
Query: 542 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 601
           ||||| ||| ||||| |||| ||||| | ||||||||||||||  | ||| ||||  |||
Sbjct: 740 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 799

                                                                       
Query: 602 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 661
           || |||||||||   ||  | ||||| ||| | |||||||||||| |||| || ||||||
Sbjct: 800 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 859

                                   
Query: 662 tctggtgagcaatttgggaaatgg 685
           ||||| |  |||||| ||||||||
Sbjct: 860 tctggcggacaatttaggaaatgg 883



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 199 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 258
           |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| ||||
Sbjct: 385 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 444

                      
Query: 259 tcctgaaagca 269
           | |||||||||
Sbjct: 445 tactgaaagca 455



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>dbj|AK100699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114M02, full
            insert sequence
          Length = 2570

 Score =  129 bits (65), Expect = 1e-26
 Identities = 150/177 (84%), Gaps = 1/177 (0%)
 Strand = Plus / Plus

                                                                        
Query: 455  ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 514
            ||||||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| |
Sbjct: 876  ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaa-t 934

                                                                        
Query: 515  ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 574
            | ||  || | | ||  ||||| ||||||| | ||  ||||| |||  ||||||||||||
Sbjct: 935  gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 994

                                                                     
Query: 575  aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggag 631
            ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 995  aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggag 1051



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 132/164 (80%)
 Strand = Plus / Plus

                                                                       
Query: 106 tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 165
           ||||| |||||||| |||||||||||| ||||||| ||| ||| ||    ||||||  ||
Sbjct: 293 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 352

                                                                       
Query: 166 gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 225
           |  ||||||| || | |||||||||||    |||||||||||| |||| || ||||||||
Sbjct: 353 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 412

                                                       
Query: 226 ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 269
           || |||||||| | ||| | ||||| |||||||| |||| ||||
Sbjct: 413 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 456



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                       
Query: 195 acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 254
           |||||||||||||| || | || |||||||| | ||||||||   ||||| ||||| |||
Sbjct: 514 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 573

                                      
Query: 255 ctggtcctgaaagcagcaaggatgatg 281
           |||   || |||||| |||||||||||
Sbjct: 574 ctgactctcaaagcaacaaggatgatg 600



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 384 catctgagaaaagttttgagactcgcaaaa 413
           |||||||||||| |||||||||||| ||||
Sbjct: 805 catctgagaaaaattttgagactcgaaaaa 834



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>ref|XM_947213.1| Theileria annulata strain Ankara pre-mRNA splicing factor (TA13035)
            partial mRNA
          Length = 2082

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 657  taccatctggtgagcaatttgg 678
            ||||||||||||||||||||||
Sbjct: 1903 taccatctggtgagcaatttgg 1882



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>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete
              sequence
          Length = 202134

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 215    ctggcaaatggttggcagtgg 235
              |||||||||||||||||||||
Sbjct: 115940 ctggcaaatggttggcagtgg 115960



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>ref|NM_193838.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 414

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   gggcaccatggggttcatcc 28
           ||||||||||||||||||||
Sbjct: 168 gggcaccatggggttcatcc 149



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>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence
          Length = 158864

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   aataatcctgaagctgagga 330
             ||||||||||||||||||||
Sbjct: 40381 aataatcctgaagctgagga 40362



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>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete
             sequence
          Length = 206418

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   aataatcctgaagctgagga 330
             ||||||||||||||||||||
Sbjct: 87454 aataatcctgaagctgagga 87435



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>gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosome 12, complete sequence
          Length = 202970

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 255    ctggtcctgaaagcagcaaggatg 278
              |||||||||||||||| |||||||
Sbjct: 136272 ctggtcctgaaagcagaaaggatg 136295



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>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3,
             complete sequence
          Length = 114882

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 563   catgctagaacaaagggttctaagagggttaagctccacaggga 606
             |||||||  ||||||||||| |||||||| ||| | ||||||||
Sbjct: 24108 catgctaagacaaagggttcaaagagggtgaaggttcacaggga 24065



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>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence
          Length = 157813

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    aataatcctgaagctgagga 330
              ||||||||||||||||||||
Sbjct: 149023 aataatcctgaagctgagga 149004



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>emb|AJ250836.1|CAR250836 Cicer arietinum mRNA for phenylalanine ammonia-lyase (pal gene)
          Length = 2276

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 gcaccaaacccagttgtgactcca 211
           |||||||||||||| |||||||||
Sbjct: 353 gcaccaaacccagtggtgactcca 330



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>gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, complete sequence
          Length = 187924

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ggcatgcaaaaatggaccag 521
             ||||||||||||||||||||
Sbjct: 16714 ggcatgcaaaaatggaccag 16733



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>gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, complete sequence
          Length = 171818

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    tgaaagcagcaaggatgatg 281
              ||||||||||||||||||||
Sbjct: 153841 tgaaagcagcaaggatgatg 153860



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>gb|AC115540.3| Homo sapiens BAC clone RP11-629I23 from 4, complete sequence
          Length = 167483

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 390   agaaaagttttgagactcgcaaaatgaa 417
             ||||||||||||||||||  ||||||||
Sbjct: 44395 agaaaagttttgagactctgaaaatgaa 44422



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>gb|AC007662.3| Arabidopsis thaliana chromosome 2 BAC F9A16 genomic sequence, complete
             sequence
          Length = 102249

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atggggttcatcctcaaatg 35
             ||||||||||||||||||||
Sbjct: 94380 atggggttcatcctcaaatg 94399



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>gb|AC006527.5| Arabidopsis thaliana chromosome 2 clone F27C21 map mi421, complete
             sequence
          Length = 33117

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atggggttcatcctcaaatg 35
             ||||||||||||||||||||
Sbjct: 14691 atggggttcatcctcaaatg 14710



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>gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, complete sequence
          Length = 182622

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   ggcatgcaaaaatggaccag 521
             ||||||||||||||||||||
Sbjct: 15220 ggcatgcaaaaatggaccag 15201



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 9        gggcaccatggggttcatcc 28
                ||||||||||||||||||||
Sbjct: 15258509 gggcaccatggggttcatcc 15258528



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>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence
          Length = 161391

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     acaattgggctcaaccttctgatc 119
              ||||||| ||||||||||||||||
Sbjct: 149340 acaattgcgctcaaccttctgatc 149317



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>ref|XM_218617.3| PREDICTED: Rattus norvegicus myosin, heavy polypeptide 14 (predicted)
            (Myh14_predicted), mRNA
          Length = 6449

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  aagcagcaaggatgatgttg 284
            ||||||||||||||||||||
Sbjct: 4661 aagcagcaaggatgatgttg 4680



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>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0493G01
          Length = 167587

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      gggcaccatggggttcatcc 28
              ||||||||||||||||||||
Sbjct: 111882 gggcaccatggggttcatcc 111901



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>dbj|BS000015.1| Pan troglodytes chromosome 22 clone:PTB-017F24, map 22, complete
             sequences
          Length = 117746

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   atctggtttagactctgagg 308
             ||||||||||||||||||||
Sbjct: 28556 atctggtttagactctgagg 28537



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>dbj|AP000929.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-778B17, complete
              sequence
          Length = 197195

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    catctggtcctgaaagcagc 271
              ||||||||||||||||||||
Sbjct: 176285 catctggtcctgaaagcagc 176266



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>dbj|AP003781.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-49K4, complete
              sequence
          Length = 177748

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    catctggtcctgaaagcagc 271
              ||||||||||||||||||||
Sbjct: 145453 catctggtcctgaaagcagc 145434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,166,091
Number of Sequences: 3902068
Number of extensions: 5166091
Number of successful extensions: 102699
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102548
Number of HSP's gapped (non-prelim): 145
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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