ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39b04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M14, full insert sequence Length = 1960 Score = 729 bits (368), Expect = 0.0 Identities = 566/631 (89%), Gaps = 1/631 (0%) Strand = Plus / Plus Query: 5 atctgcggcatctttgattacctgcaggagcgtgccaaaggcagcaccatgtatggattc 64 |||||||||||||| |||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 409 atctgcggcatcttcgattacctgcaggaatatgcaaaaggatccgtcatgtatggattc 468 Query: 65 aagggaggcccagctggtgtcatgaagggcaagtacgtactagctgactgctgatttcgt 124 |||||||| |||||||| ||||||||| |||||||||| |||| ||||| |||| || Sbjct: 469 aagggaggtccagctggagtcatgaagtgcaagtacgttg-agctcactgcggattatgt 527 Query: 125 gtacccctacagaaaccagggtggattcgatatgatctgcagtggaagggacaagattga 184 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 528 gtacccctacagaaaccagggtggatttgatatgatctgcagtggtagggacaagattga 587 Query: 185 aacaccagagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggact 244 ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| || Sbjct: 588 aacaccagagcagttcaagcaagctgaagacactgtaaacaaacttgatttggatgggct 647 Query: 245 tgttgtcattggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcag 304 |||||||||||||||||||||||||||||| || |||||||| |||| ||| |||||||| Sbjct: 648 tgttgtcattggtggtgatgattcaaacacaaacgcatgccttcttgctgagtacttcag 707 Query: 305 gggaaggaacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaa 364 ||| | |||| |||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 708 ggggaagaacatgaaaactcgtgtcattggttgcccaaagactattgatggagatctgaa 767 Query: 365 atgcaaggaggtcccaacaagctttggatttgacactgcttgcaagatatactccgaaat 424 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 768 atgcaaggaggttccaacaagctttggttttgacactgcttgcaagatatactctgaaat 827 Query: 425 gattggcaatgtcatgactgatgcacggtcaacaggcaaatactaccactttgtgaggct 484 |||||| ||||| |||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 828 gattggtaatgttatgactgatgcacgctcaaccgggaagtactaccactttgtgaggct 887 Query: 485 tatgggtcgtnctgcttctcacattacactagagtgtgctctacagacacaccctaatgt 544 |||||| ||| ||||||||||||||||| | ||||||||||| || ||||| |||||||| Sbjct: 888 tatgggacgtgctgcttctcacattacattggagtgtgctctgcaaacacatcctaatgt 947 Query: 545 tgcactcatcggtgaagaggttgctgagaagaaggaaacactcaagaatgtcacagacta 604 ||||||||| || ||||||||||||| ||||||||||| || || | |||||| ||||| Sbjct: 948 tgcactcattggagaagaggttgctgcaaagaaggaaactcttaaaagtgtcaccgacta 1007 Query: 605 cattaccgatgttgtttgcaaacgtgcagaa 635 ||||||||| |||| ||||| ||||||||| Sbjct: 1008 cattaccgacattgtctgcaagcgtgcagaa 1038
>gb|AY104192.1| Zea mays PCO077725 mRNA sequence Length = 1688 Score = 662 bits (334), Expect = 0.0 Identities = 499/553 (90%), Gaps = 1/553 (0%) Strand = Plus / Plus Query: 58 tggattcaagggaggcccagctggtgtcatgaagggcaagtacgtactagctgactgctg 117 |||||||||||||||||| ||||| |||||||| |||| || || | || ||| | | Sbjct: 21 tggattcaagggaggccctgctgggatcatgaagtgcaaatatgtggaa-ctcacttcag 79 Query: 118 atttcgtgtacccctacagaaaccagggtggattcgatatgatctgcagtggaagggaca 177 | || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 80 actttgtgtatccctacagaaaccagggcggattcgatatgatctgcagtggaagggaca 139 Query: 178 agattgaaacaccagagcagttcaagcaagctgaagacacagtcaacagacttgatttgg 237 ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 140 agattgaaacaccggagcagttcaagcaagctgaagacacagccaacaagcttgatttgg 199 Query: 238 atggacttgttgtcattggtggtgatgattcaaacactaatgcatgcctccttggtgaat 297 ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 200 atggacttgttgtcattggtggtgatgattcaaacaccaatgcctgccttcttggtgaat 259 Query: 298 acttcaggggaaggaacttgaagactcgtgttattggttgcccaaagactattgatggag 357 |||| ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 260 actttaggtcaaggaacctgaagactcgtgttattggttgcccaaagactatcgatggag 319 Query: 358 atctgaaatgcaaggaggtcccaacaagctttggatttgacactgcttgcaagatatact 417 |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 320 atctgaaatgtaaggaggtaccaacaagctttggatttgatactgcttgcaagatatact 379 Query: 418 ccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaatactaccactttg 477 ||||||||||||||||||| |||||||||||| | || ||||| |||||||||||||||| Sbjct: 380 ccgaaatgattggcaatgttatgactgatgcaagatccacaggaaaatactaccactttg 439 Query: 478 tgaggcttatgggtcgtnctgcttctcacattacactagagtgtgctctacagacacacc 537 ||||||||||||||||| ||||||||||||||||| | || || ||| | || ||||||| Sbjct: 440 tgaggcttatgggtcgtgctgcttctcacattacattggaatgcgctttgcaaacacacc 499 Query: 538 ctaatgttgcactcatcggtgaagaggttgctgagaagaaggaaacactcaagaatgtca 597 | |||| ||||||||| || ||||||||||||| |||||| ||||| || |||||||||| Sbjct: 500 ccaatgctgcactcattggggaagaggttgctgcgaagaaagaaacccttaagaatgtca 559 Query: 598 cagactacattac 610 || |||||||||| Sbjct: 560 caaactacattac 572
>gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent phosphofructokinase beta subunit (PPi-PFKb) mRNA, complete cds Length = 2034 Score = 327 bits (165), Expect = 3e-86 Identities = 401/480 (83%) Strand = Plus / Plus Query: 129 ccctacagaaaccagggtggattcgatatgatctgcagtggaagggacaagattgaaaca 188 ||||| |||||||||||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct: 513 ccctatagaaaccagggtggctttgatatgatctgtagtgggagagacaagatcgaaacc 572 Query: 189 ccagagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgtt 248 ||||||||||| || |||||| ||| |||| | ||||||||||| || ||||| Sbjct: 573 ccagagcagtttaaacaagctacagaaacagcagtgaagcttgatttggacggccttgtc 632 Query: 249 gtcattggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcagggga 308 || |||||||||||||||||||| || ||||| |||||||||| |||| |||||||| | Sbjct: 633 gttattggtggtgatgattcaaatacaaatgcttgcctccttgctgaacacttcaggagt 692 Query: 309 aggaacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgc 368 | |||||||| |||| |||||| || |||||||| || |||||||| || |||| ||| Sbjct: 693 aaaaacttgaaaactcttgttatgggatgcccaaaaaccattgatggtgacttgaagtgc 752 Query: 369 aaggaggtcccaacaagctttggatttgacactgcttgcaagatatactccgaaatgatt 428 || |||||||| |||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 753 aaagaggtccctgcaagctttggatttgataccgcatgcaagatatatgcagaaatgatt 812 Query: 429 ggcaatgtcatgactgatgcacggtcaacaggcaaatactaccactttgtgaggcttatg 488 || |||||||||| |||||||||||||| || ||||| ||||||||||| |||||||| Sbjct: 813 ggaaatgtcatgatagatgcacggtcaactggaaaatattaccactttgtacggcttatg 872 Query: 489 ggtcgtnctgcttctcacattacactagagtgtgctctacagacacaccctaatgttgca 548 || ||| | |||||||| ||||| |||||||||||| | || || |||||||| || | Sbjct: 873 gggcgtgcagcttctcatattactctagagtgtgctttgcaaactcaccctaacattacc 932 Query: 549 ctcatcggtgaagaggttgctgagaagaaggaaacactcaagaatgtcacagactacatt 608 | ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 933 attatcggtgaagaggttgctgccaagaagcaaacactcaaaaatgtcacagactacatt 992 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 54 tgtatggattcaagggaggcccagctggtgtcatgaagggcaagtacgt 102 |||||||||||| ||||| |||||||| |||||||| |||| ||||| Sbjct: 439 tgtatggattcagaggaggtccagctggaatcatgaagtgcaaatacgt 487
>ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G12000 mRNA, complete cds Length = 2072 Score = 262 bits (132), Expect = 1e-66 Identities = 338/407 (83%) Strand = Plus / Plus Query: 132 tacagaaaccagggtggattcgatatgatctgcagtggaagggacaagattgaaacacca 191 ||||||||||||||||| || || ||||||||||||||||| ||||||||||||||||| Sbjct: 574 tacagaaaccagggtggttttgacatgatctgcagtggaagagacaagattgaaacacct 633 Query: 192 gagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgttgtc 251 || ||||| || ||||||||||| |||| || | |||||||||||||| | || || Sbjct: 634 gaccagtttaaacaagctgaagaaacagcaaagaagcttgatttggatgggttggtggtt 693 Query: 252 attggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcaggggaagg 311 || ||||| |||||||| ||||| ||||| ||||| |||| |||| |||||||| | | | Sbjct: 694 atcggtggagatgattccaacaccaatgcttgccttcttgctgaaaacttcaggagtaag 753 Query: 312 aacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgcaag 371 |||||||| || || || ||||| ||||| ||||| |||||||| ||| |||||||||| Sbjct: 754 aacttgaaaacccgagtcattgggtgccccaagaccattgatggtgatttgaaatgcaaa 813 Query: 372 gaggtcccaacaagctttggatttgacactgcttgcaagatatactccgaaatgattggc 431 ||||| || || || ||||| ||||| || ||||||||||| ||||| |||||||| || Sbjct: 814 gaggttcctactagttttgggtttgatacagcttgcaagatttactctgaaatgatcgga 873 Query: 432 aatgtcatgactgatgcacggtcaacaggcaaatactaccactttgtgaggcttatgggt 491 || ||||||| ||||||| |||| || || || ||||| || ||||| || ||||||||| Sbjct: 874 aacgtcatgattgatgcaaggtcgactggaaagtactatcattttgtaagacttatgggt 933 Query: 492 cgtnctgcttctcacattacactagagtgtgctctacagacacaccc 538 ||| ||||||| |||||||| || ||||||||| |||| || ||||| Sbjct: 934 cgtgctgcttcccacattacgcttgagtgtgctttacaaactcaccc 980 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 17 tttgattacctgcaggagcgtgccaaaggcagcaccatgtatggattcaagggaggccca 76 |||||||||||||| |||||||| ||||| ||||| | || || |||||||| || ||| Sbjct: 460 tttgattacctgcaagagcgtgcgaaaggtagcacattttacgggttcaagggtggtcca 519 Query: 77 gctggtgtcatgaa 90 |||||| ||||||| Sbjct: 520 gctggtatcatgaa 533 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 aagaatgtcacagactacat 607 |||||||||||||||||||| Sbjct: 1030 aagaatgtcacagactacat 1049
>gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dependent phosphofuctokinase beta subunit (At1g12000) mRNA, complete cds Length = 1733 Score = 262 bits (132), Expect = 1e-66 Identities = 338/407 (83%) Strand = Plus / Plus Query: 132 tacagaaaccagggtggattcgatatgatctgcagtggaagggacaagattgaaacacca 191 ||||||||||||||||| || || ||||||||||||||||| ||||||||||||||||| Sbjct: 466 tacagaaaccagggtggttttgacatgatctgcagtggaagagacaagattgaaacacct 525 Query: 192 gagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgttgtc 251 || ||||| || ||||||||||| |||| || | |||||||||||||| | || || Sbjct: 526 gaccagtttaaacaagctgaagaaacagcaaagaagcttgatttggatgggttggtggtt 585 Query: 252 attggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcaggggaagg 311 || ||||| |||||||| ||||| ||||| ||||| |||| |||| |||||||| | | | Sbjct: 586 atcggtggagatgattccaacaccaatgcttgccttcttgctgaaaacttcaggagtaag 645 Query: 312 aacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgcaag 371 |||||||| || || || ||||| ||||| ||||| |||||||| ||| |||||||||| Sbjct: 646 aacttgaaaacccgagtcattgggtgccccaagaccattgatggtgatttgaaatgcaaa 705 Query: 372 gaggtcccaacaagctttggatttgacactgcttgcaagatatactccgaaatgattggc 431 ||||| || || || ||||| ||||| || ||||||||||| ||||| |||||||| || Sbjct: 706 gaggttcctactagttttgggtttgatacagcttgcaagatttactctgaaatgatcgga 765 Query: 432 aatgtcatgactgatgcacggtcaacaggcaaatactaccactttgtgaggcttatgggt 491 || ||||||| ||||||| |||| || || || ||||| || ||||| || ||||||||| Sbjct: 766 aacgtcatgattgatgcaaggtcgactggaaagtactatcattttgtaagacttatgggt 825 Query: 492 cgtnctgcttctcacattacactagagtgtgctctacagacacaccc 538 ||| ||||||| |||||||| || ||||||||| |||| || ||||| Sbjct: 826 cgtgctgcttcccacattacgcttgagtgtgctttacaaactcaccc 872 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 17 tttgattacctgcaggagcgtgccaaaggcagcaccatgtatggattcaagggaggccca 76 |||||||||||||| |||||||| ||||| ||||| | || || |||||||| || ||| Sbjct: 352 tttgattacctgcaagagcgtgcgaaaggtagcacattttacgggttcaagggtggtcca 411 Query: 77 gctggtgtcatgaa 90 |||||| ||||||| Sbjct: 412 gctggtatcatgaa 425 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 aagaatgtcacagactacat 607 |||||||||||||||||||| Sbjct: 922 aagaatgtcacagactacat 941
>gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dependent phosphofuctokinase beta subunit (At1g12000; F12F1.13) mRNA, complete cds Length = 1965 Score = 262 bits (132), Expect = 1e-66 Identities = 338/407 (83%) Strand = Plus / Plus Query: 132 tacagaaaccagggtggattcgatatgatctgcagtggaagggacaagattgaaacacca 191 ||||||||||||||||| || || ||||||||||||||||| ||||||||||||||||| Sbjct: 574 tacagaaaccagggtggttttgacatgatctgcagtggaagagacaagattgaaacacct 633 Query: 192 gagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgttgtc 251 || ||||| || ||||||||||| |||| || | |||||||||||||| | || || Sbjct: 634 gaccagtttaaacaagctgaagaaacagcaaagaagcttgatttggatgggttggtggtt 693 Query: 252 attggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcaggggaagg 311 || ||||| |||||||| ||||| ||||| ||||| |||| |||| |||||||| | | | Sbjct: 694 atcggtggagatgattccaacaccaatgcttgccttcttgctgaaaacttcaggagtaag 753 Query: 312 aacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgcaag 371 |||||||| || || || ||||| ||||| ||||| |||||||| ||| |||||||||| Sbjct: 754 aacttgaaaacccgagtcattgggtgccccaagaccattgatggtgatttgaaatgcaaa 813 Query: 372 gaggtcccaacaagctttggatttgacactgcttgcaagatatactccgaaatgattggc 431 ||||| || || || ||||| ||||| || ||||||||||| ||||| |||||||| || Sbjct: 814 gaggttcctactagttttgggtttgatacagcttgcaagatttactctgaaatgatcgga 873 Query: 432 aatgtcatgactgatgcacggtcaacaggcaaatactaccactttgtgaggcttatgggt 491 || ||||||| ||||||| |||| || || || ||||| || ||||| || ||||||||| Sbjct: 874 aacgtcatgattgatgcaaggtcgactggaaagtactatcattttgtaagacttatgggt 933 Query: 492 cgtnctgcttctcacattacactagagtgtgctctacagacacaccc 538 ||| ||||||| |||||||| || ||||||||| |||| || ||||| Sbjct: 934 cgtgctgcttcccacattacgcttgagtgtgctttacaaactcaccc 980 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 17 tttgattacctgcaggagcgtgccaaaggcagcaccatgtatggattcaagggaggccca 76 |||||||||||||| |||||||| ||||| ||||| | || || |||||||| || ||| Sbjct: 460 tttgattacctgcaagagcgtgcgaaaggtagcacattttacgggttcaagggtggtcca 519 Query: 77 gctggtgtcatgaa 90 |||||| ||||||| Sbjct: 520 gctggtatcatgaa 533 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 aagaatgtcacagactacat 607 |||||||||||||||||||| Sbjct: 1030 aagaatgtcacagactacat 1049
>gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP) beta-subunit mRNA, complete cds Length = 1986 Score = 232 bits (117), Expect = 1e-57 Identities = 390/480 (81%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 47 agcaccatgtatggattcaagggaggcccagctggtgtcatgaagggcaagtacgtacta 106 ||||| |||||||| |||| ||| || |||||||| ||||||||||| ||||| || | Sbjct: 424 agcacaatgtatgggttcaggggtggaccagctggggtcatgaagggaaagtatgtggt- 482 Query: 107 gctgactgctgatttcgtgtacccctacagaaaccagggtggattcgatatgatctgcag 166 | |||| | || ||| | ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 483 gttgaccccggagttcatttacccatacagaaatcagggtggatttgatatgatctgcag 542 Query: 167 tggaagggacaagattgaaacaccagagcagttcaagcaagctgaagacacagtcaacag 226 ||| |||||||||||||| || ||||||||||| |||||||||||||| |||| ||| | Sbjct: 543 tggtagggacaagattgagactccagagcagtttaagcaagctgaagaaacagccaagaa 602 Query: 227 acttgatttggatggacttgttgtcattggtggtgatgattcaaacactaatgcatgcct 286 || ||||| ||||| ||||| || |||||||| ||||| || || || ||||| || || Sbjct: 603 gctcgatttagatggtcttgtcgtaattggtggagatgactccaatacaaatgcttgtct 662 Query: 287 ccttggtgaatacttcaggggaaggaacttgaagactcgtgttattggttgcccaaagac 346 |||| ||| ||||||| | | || ||||| ||||| ||||| || ||||| || || Sbjct: 663 tcttgctgagaacttcagaagtaaaaatttgaaaactcgggttataggatgcccgaaaac 722 Query: 347 tattgatggagatctgaaatgcaaggaggtcccaacaagctttggatttgacactgcttg 406 || ||||| || | |||| || ||||| || ||||| ||||| ||||| || || || Sbjct: 723 catagatggtgacttaaaatcgaaagaggttcccacaagttttggctttgatacggcatg 782 Query: 407 caagatatactccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaata 466 ||||||||| | ||||||||||| |||||||||| ||||| || |||||||| ||||| Sbjct: 783 caagatatatgcagaaatgattgggaatgtcatgatagatgctcgatcaacaggaaaata 842 Query: 467 ctaccactttgtgaggcttatgggtcgtnctgcttctcacattacactagagtgtgctct 526 ||| || ||||||||||| ||||| ||| ||||||| |||||||| |||||||||||||| Sbjct: 843 ctatcattttgtgaggctcatggggcgtgctgcttcacacattactctagagtgtgctct 902
>ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G04040 mRNA, complete cds Length = 1947 Score = 228 bits (115), Expect = 2e-56 Identities = 338/410 (82%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 106 agctgactgctgatttcgtgtacccctacagaaaccagggtggattcgatatgatctgca 165 |||| ||| |||| || |||||||| || ||||||||||||||||| |||||||| || | Sbjct: 494 agcttacttctgagtttgtgtacccttatagaaaccagggtggatttgatatgatatgta 553 Query: 166 gtggaagggacaagattgaaacaccagagcagttcaagcaagctgaagacacagtca-ac 224 ||||||| |||||||||||||| ||||||||||| |||||||||||||| || || | | Sbjct: 554 gtggaagagacaagattgaaactccagagcagtttaagcaagctgaagagactgttacaa 613 Query: 225 agacttgatttggatggacttgttgtcattggtggtgatgattcaaacactaatgcatgc 284 ||| | ||||| ||||| ||||| || |||||||| ||||| || || |||||||| || Sbjct: 614 aga-tggatttagatggtcttgtggtaattggtggagatgactccaatactaatgcttgt 672 Query: 285 ctccttggtgaatacttcaggggaaggaacttgaagactcgtgttattggttgcccaaag 344 ||||||| |||| |||| || | | ||| |||| |||| |||||||| ||||| ||| Sbjct: 673 ctccttgctgaacactttagagctaaaaacatgaaaactctggttattggatgccctaag 732 Query: 345 actattgatggagatctgaaatgcaaggaggtcccaacaagctttggatttgacactgct 404 || || ||||| ||| | || |||| || ||||| || || || || ||||| |||||| Sbjct: 733 acaatcgatggtgatttaaagagcaaagaagtccccacgagtttcgggtttgatactgct 792 Query: 405 tgcaagatatactccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaa 464 |||||||||||||| ||||||||||| ||||| |||| ||||| || || || || ||| Sbjct: 793 tgcaagatatactcagaaatgattggaaatgttatgatcgatgcgcgttccacgggaaaa 852 Query: 465 tactaccactttgtgaggcttatgggtcgtnctgcttctcacattacact 514 ||||| ||||||||| | |||||||||||| ||||||||||||||||||| Sbjct: 853 tactatcactttgtgcgtcttatgggtcgtgctgcttctcacattacact 902
>gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence Length = 1952 Score = 186 bits (94), Expect = 6e-44 Identities = 324/401 (80%) Strand = Plus / Plus Query: 126 tacccctacagaaaccagggtggattcgatatgatctgcagtggaagggacaagattgaa 185 ||||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 541 tacccatacagaaatcagggtggatttgatatgatttgcagtggtagggacaagattgag 600 Query: 186 acaccagagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggactt 245 || ||||||||||| |||||||||||||| |||| || | || ||| | ||||| ||| Sbjct: 601 actccagagcagtttaagcaagctgaagagacagcaaagaagctcgatctagatggtctt 660 Query: 246 gttgtcattggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcagg 305 || || |||||||| ||||| || || || ||||| || || |||| ||| ||||||| Sbjct: 661 gtcgtaattggtggagatgactccaatacaaatgcttgtcttcttgctgagaacttcaga 720 Query: 306 ggaaggaacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaa 365 | | || ||||| ||||| |||||||| ||||| || || || ||||| || | ||| Sbjct: 721 agtaaaaatttgaaaactcgggttattggatgcccgaaaaccatagatggtgacttaaaa 780 Query: 366 tgcaaggaggtcccaacaagctttggatttgacactgcttgcaagatatactccgaaatg 425 | || ||||| || ||||| ||||| ||||| || || ||||||||||| | |||||| Sbjct: 781 tcgaaagaggttcccacaagttttggctttgatacggcatgcaagatatatgcagaaatg 840 Query: 426 attggcaatgtcatgactgatgcacggtcaacaggcaaatactaccactttgtgaggctt 485 ||||| ||||| ||| ||||| || |||||||| |||||||| || |||||| |||| Sbjct: 841 attgggaatgtgatggtagatgctcgatcaacaggaaaatactatcattttgtgcggctc 900 Query: 486 atgggtcgtnctgcttctcacattacactagagtgtgctct 526 ||||| ||| ||||||| |||||||| |||||||||||||| Sbjct: 901 atggggcgtgctgcttcacacattactctagagtgtgctct 941 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 47 agcaccatgtatggattcaagggaggcccagctggtgtcatgaagggcaagta 99 ||||| ||||||||||||| ||| || |||||||| ||||||||||| ||||| Sbjct: 463 agcacaatgtatggattcaggggtggaccagctggagtcatgaagggaaagta 515
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Minus Query: 311 gaacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgcaa 370 |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 7663142 gaacatgaaaactcgtgtcattggttgcccaaagactattgatggagatctgaaatgcaa 7663083 Query: 371 ggaggtcccaacaagctttggatttgacactgcttgcaag 410 |||||| |||||||||||||| |||||||||||||||||| Sbjct: 7663082 ggaggttccaacaagctttgggtttgacactgcttgcaag 7663043 Score = 155 bits (78), Expect = 2e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 192 gagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgttgtc 251 |||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||| Sbjct: 7663619 gagcagttcaagcaagctgaagacactgtaaacaaacttgatttggatgggcttgttgtc 7663560 Query: 252 attggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcagg 305 ||||||||||||||||||||||| || |||||||| |||| ||| ||||||||| Sbjct: 7663559 attggtggtgatgattcaaacacaaacgcatgccttcttgctgagtacttcagg 7663506 Score = 113 bits (57), Expect = 7e-22 Identities = 83/92 (90%) Strand = Plus / Minus Query: 475 ttgtgaggcttatgggtcgtnctgcttctcacattacactagagtgtgctctacagacac 534 |||||||||||||||| ||| ||||||||||||||||| | ||||||||||| || |||| Sbjct: 7662366 ttgtgaggcttatgggacgtgctgcttctcacattacattggagtgtgctctgcaaacac 7662307 Query: 535 accctaatgttgcactcatcggtgaagaggtt 566 | ||||||||||||||||| || ||||||||| Sbjct: 7662306 atcctaatgttgcactcattggagaagaggtt 7662275 Score = 97.6 bits (49), Expect = 4e-17 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 52 catgtatggattcaagggaggcccagctggtgtcatgaagggcaagtacgtactagctga 111 ||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||| | Sbjct: 7664195 catgtatggattcaagggaggtccagctggagtcatgaagtgcaagtacgt-tgagctca 7664137 Query: 112 ctgctgatttcgtgtacccctacagaaaccagg 144 |||| |||| |||||||||||||||||||||| Sbjct: 7664136 ctgcggattatgtgtacccctacagaaaccagg 7664104 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 142 agggtggattcgatatgatctgcagtggaagggacaagattgaaacaccagagcag 197 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 7663799 agggtggatttgatatgatctgcagtggtagggacaagattgaaacaccagagcag 7663744 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 409 agatatactccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaatact 468 |||||||||| ||||||||||| ||||| |||||||||||||| ||||| || || |||| Sbjct: 7662826 agatatactctgaaatgattggtaatgttatgactgatgcacgctcaaccgggaagtact 7662767 Query: 469 accact 474 |||||| Sbjct: 7662766 accact 7662761 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 562 aggttgctgagaagaaggaaacactcaagaatgtcacagactacattaccgatgttgttt 621 ||||||||| ||||||||||| || || | |||||| |||||||||||||| |||| | Sbjct: 7661705 aggttgctgcaaagaaggaaactcttaaaagtgtcaccgactacattaccgacattgtct 7661646 Query: 622 gcaaacgtgcagaa 635 |||| ||||||||| Sbjct: 7661645 gcaagcgtgcagaa 7661632
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Minus Query: 311 gaacttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgcaa 370 |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86397 gaacatgaaaactcgtgtcattggttgcccaaagactattgatggagatctgaaatgcaa 86338 Query: 371 ggaggtcccaacaagctttggatttgacactgcttgcaag 410 |||||| |||||||||||||| |||||||||||||||||| Sbjct: 86337 ggaggttccaacaagctttgggtttgacactgcttgcaag 86298 Score = 155 bits (78), Expect = 2e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 192 gagcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgttgtc 251 |||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||| Sbjct: 86874 gagcagttcaagcaagctgaagacactgtaaacaaacttgatttggatgggcttgttgtc 86815 Query: 252 attggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcagg 305 ||||||||||||||||||||||| || |||||||| |||| ||| ||||||||| Sbjct: 86814 attggtggtgatgattcaaacacaaacgcatgccttcttgctgagtacttcagg 86761 Score = 113 bits (57), Expect = 7e-22 Identities = 83/92 (90%) Strand = Plus / Minus Query: 475 ttgtgaggcttatgggtcgtnctgcttctcacattacactagagtgtgctctacagacac 534 |||||||||||||||| ||| ||||||||||||||||| | ||||||||||| || |||| Sbjct: 85621 ttgtgaggcttatgggacgtgctgcttctcacattacattggagtgtgctctgcaaacac 85562 Query: 535 accctaatgttgcactcatcggtgaagaggtt 566 | ||||||||||||||||| || ||||||||| Sbjct: 85561 atcctaatgttgcactcattggagaagaggtt 85530 Score = 97.6 bits (49), Expect = 4e-17 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 52 catgtatggattcaagggaggcccagctggtgtcatgaagggcaagtacgtactagctga 111 ||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||| | Sbjct: 87450 catgtatggattcaagggaggtccagctggagtcatgaagtgcaagtacgt-tgagctca 87392 Query: 112 ctgctgatttcgtgtacccctacagaaaccagg 144 |||| |||| |||||||||||||||||||||| Sbjct: 87391 ctgcggattatgtgtacccctacagaaaccagg 87359 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 142 agggtggattcgatatgatctgcagtggaagggacaagattgaaacaccagagcag 197 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87054 agggtggatttgatatgatctgcagtggtagggacaagattgaaacaccagagcag 86999 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 409 agatatactccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaatact 468 |||||||||| ||||||||||| ||||| |||||||||||||| ||||| || || |||| Sbjct: 86081 agatatactctgaaatgattggtaatgttatgactgatgcacgctcaaccgggaagtact 86022 Query: 469 accact 474 |||||| Sbjct: 86021 accact 86016 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 562 aggttgctgagaagaaggaaacactcaagaatgtcacagactacattaccgatgttgttt 621 ||||||||| ||||||||||| || || | |||||| |||||||||||||| |||| | Sbjct: 84960 aggttgctgcaaagaaggaaactcttaaaagtgtcaccgactacattaccgacattgtct 84901 Query: 622 gcaaacgtgcagaa 635 |||| ||||||||| Sbjct: 84900 gcaagcgtgcagaa 84887
>emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent phosphofructokinase beta subunit Length = 5280 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 315 ttgaagactcgtgttattggttgcccaaagactattgatggagatctgaaatgcaaggag 374 ||||| || ||||| ||||| ||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 1540 ttgaaaacccgtgtcattggctgcccaaagaccattgatggtgatctcaaatgcaaagag 1599 Query: 375 gtcccaacaagctttggatttgacactgcttgcaag 410 || ||||| || ||||||||||||||||| |||||| Sbjct: 1600 gttccaaccagttttggatttgacactgcatgcaag 1635 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 141 cagggtggattcgatatgatctgcagtggaagggacaagattgaaacaccagagcag 197 |||||||| || ||||||||||||||||| || ||||| ||||||||||| |||||| Sbjct: 1175 cagggtggttttgatatgatctgcagtgggagagacaaaattgaaacacctgagcag 1231 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 420 gaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaata 466 ||||||||||| |||||||||| |||||| || ||||| || ||||| Sbjct: 1983 gaaatgattggaaatgtcatgattgatgcccgatcaactggaaaata 2029
>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence Length = 120811 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 234 ttggatggacttgttgtcattggtggtgatgattcaaacactaatgcatgcctccttggt 293 |||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||||| | Sbjct: 83907 ttggatgggcttgttgttattggtggagatgactcaaacaccaatgcatgcctccttgct 83966 Query: 294 gaatacttcagg 305 || |||||||| Sbjct: 83967 gagaacttcagg 83978 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 141 cagggtggattcgatatgatctgcagtggaagggacaagattgaaacaccagagcag 197 |||||||| || || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 83728 cagggtggttttgacatgatttgcagtgggagggacaagattgaaactccagagcag 83784 Score = 58.0 bits (29), Expect = 4e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 475 ttgtgaggcttatgggtcgtnctgcttctcacattacactagagtgtgctctacagacac 534 ||||| |||||||||| ||| | ||||| ||||||||||| || ||||||||||| || | Sbjct: 86352 ttgtgcggcttatggggcgtgcagcttcacacattacactggaatgtgctctacaaactc 86411 Query: 535 accc 538 |||| Sbjct: 86412 accc 86415 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 331 ttggttgcccaaagactattgatggagatctgaaatgcaaggaggtcccaacaagctttg 390 |||| ||||| || || |||||||| ||| ||||| |||| || || || |||||||||| Sbjct: 84234 ttggatgccctaaaaccattgatggtgatttgaaaagcaaagaagttcccacaagctttg 84293 Query: 391 gatttgacactgcttgcaag 410 | ||||| |||||||||||| Sbjct: 84294 ggtttgatactgcttgcaag 84313
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11 Length = 198022 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 141 cagggtggattcgatatgatctgcagtggaagggacaagattgaaacaccagagcag 197 ||||||||||| |||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 55282 cagggtggatttgatatgatatgtagtggaagagacaagattgaaactccagagcag 55338 Score = 58.0 bits (29), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 483 cttatgggtcgtnctgcttctcacattacact 514 |||||||||||| ||||||||||||||||||| Sbjct: 55959 cttatgggtcgtgctgcttctcacattacact 55990 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 409 agatatactccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaatact 468 |||||||||| ||||||||||| ||||| |||| ||||| || || || || ||||||| Sbjct: 55804 agatatactcagaaatgattggaaatgttatgatcgatgcgcgttccacgggaaaatact 55863 Query: 469 accact 474 | |||| Sbjct: 55864 atcact 55869
>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 Length = 88848 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 141 cagggtggattcgatatgatctgcagtggaagggacaagattgaaacaccagagcag 197 ||||||||||| |||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 62153 cagggtggatttgatatgatatgtagtggaagagacaagattgaaactccagagcag 62097 Score = 58.0 bits (29), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 483 cttatgggtcgtnctgcttctcacattacact 514 |||||||||||| ||||||||||||||||||| Sbjct: 61476 cttatgggtcgtgctgcttctcacattacact 61445 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Minus Query: 409 agatatactccgaaatgattggcaatgtcatgactgatgcacggtcaacaggcaaatact 468 |||||||||| ||||||||||| ||||| |||| ||||| || || || || ||||||| Sbjct: 61631 agatatactcagaaatgattggaaatgttatgatcgatgcgcgttccacgggaaaatact 61572 Query: 469 accact 474 | |||| Sbjct: 61571 atcact 61566
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 141 cagggtggattcgatatgatctgcagtggaagggacaagattgaaacacc 190 |||||||| || || ||||||||||||||||| ||||||||||||||||| Sbjct: 61836 cagggtggttttgacatgatctgcagtggaagagacaagattgaaacacc 61885 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 483 cttatgggtcgtnctgcttctcacattacactagagtgtgctctacagacacaccc 538 |||||||||||| ||||||| |||||||| || ||||||||| |||| || ||||| Sbjct: 62671 cttatgggtcgtgctgcttcccacattacgcttgagtgtgctttacaaactcaccc 62726 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 194 gcagttcaagcaagctgaagacacagtcaacagacttgatttggatggacttgttgtcat 253 |||||| || ||||||||||| |||| || | |||||||||||||| | || || || Sbjct: 61985 gcagtttaaacaagctgaagaaacagcaaagaagcttgatttggatgggttggtggttat 62044 Query: 254 tggtggtgatgattcaaacactaatgcatgcctccttggtgaatacttcagg 305 ||||| |||||||| ||||| ||||| ||||| |||| |||| |||||||| Sbjct: 62045 cggtggagatgattccaacaccaatgcttgccttcttgctgaaaacttcagg 62096 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 20 gattacctgcaggagcgtgccaaaggcagcaccatgtatggattcaagggaggcccagct 79 ||||||||||| |||||||| ||||| ||||| | || || |||||||| || |||||| Sbjct: 61587 gattacctgcaagagcgtgcgaaaggtagcacattttacgggttcaagggtggtccagct 61646 Query: 80 ggtgtcatgaa 90 ||| ||||||| Sbjct: 61647 ggtatcatgaa 61657 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 aagaatgtcacagactacat 607 |||||||||||||||||||| Sbjct: 63002 aagaatgtcacagactacat 63021
>gb|AY034597.1| Bacillus sphaericus putative acetyl-CoA carboxylase alpha subunit (accA) gene, partial cds; 6-phosphofructokinase (pfk) gene, complete cds; and putative pyruvate kinase (pykA) gene, partial cds Length = 2922 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 cttgttgtcattggtggtgatg 264 |||||||||||||||||||||| Sbjct: 911 cttgttgtcattggtggtgatg 932
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 252 attggtggtgatgattcaaacactaatgc 280 ||||||||||||||||| || |||||||| Sbjct: 19308 attggtggtgatgattcgaatactaatgc 19280
>emb|AJ697761.1| Eucalyptus globulus subsp. globulus partial precursor RNA for putative pyrophosphate dependent phosphofrutokinase Length = 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 231 gatttggatggacttgttgtcattggtggtgatgattcaaacactaatgcatgcctcctt 290 ||||||||||||||| | |||||||| || || ||||| || || ||||| ||||| ||| Sbjct: 181 gatttggatggacttttggtcattggaggggacgattccaatacaaatgcgtgccttctt 240 Query: 291 g 291 | Sbjct: 241 g 241
>gb|AC015801.25|AC015801 Homo sapiens chromosome 17, clone RP11-854A13, complete sequence Length = 185351 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 gaagaggttgctgagaagaaggaaa 582 ||||||||||||||||| ||||||| Sbjct: 116265 gaagaggttgctgagaataaggaaa 116289
>dbj|AB016081.2| Oryzias latipes OlGC6 gene for guanylyl cyclase C, complete cds Length = 21935 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 aacagacttgatttggatgga 242 ||||||||||||||||||||| Sbjct: 6562 aacagacttgatttggatgga 6542
>gb|AC124326.11| Mus musculus chromosome 16, clone RP24-463I7, complete sequence Length = 168107 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 atgatctgcagtggaaggga 175 |||||||||||||||||||| Sbjct: 32394 atgatctgcagtggaaggga 32375
>ref|XM_612488.2| PREDICTED: Bos taurus similar to RAB GTPase activating protein 1 (LOC533170), mRNA Length = 3601 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 tgagaagaaggaaacactcaagaa 592 |||| ||||||||||||||||||| Sbjct: 1770 tgaggagaaggaaacactcaagaa 1793
>gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome 15, complete sequence Length = 212090 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 actcaagaatgtcacagact 603 |||||||||||||||||||| Sbjct: 71281 actcaagaatgtcacagact 71262
>gb|AC138299.14| Mus musculus chromosome 18, clone RP23-296E4, complete sequence Length = 257153 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cttcaggggaaggaacttga 318 |||||||||||||||||||| Sbjct: 158695 cttcaggggaaggaacttga 158676
>gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, complete sequence Length = 196923 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 actcaagaatgtcacagact 603 |||||||||||||||||||| Sbjct: 188351 actcaagaatgtcacagact 188332
>ref|XM_648081.1| Entamoeba histolytica HM-1:IMSS pyrophosphate-dependent phosphofructokinase (91.t00031) partial mRNA Length = 1641 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 ttggtggtgatgattcaaacactaatgc 280 |||||||||||||||| || |||||||| Sbjct: 512 ttggtggtgatgattctaatactaatgc 539
>ref|XM_661445.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80102) partial mRNA Length = 801 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 agaagaaggaaacactcaag 590 |||||||||||||||||||| Sbjct: 411 agaagaaggaaacactcaag 430
>gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, complete sequence Length = 163375 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tgttgtcattggtggtgatg 264 |||||||||||||||||||| Sbjct: 153652 tgttgtcattggtggtgatg 153633
>emb|CR457442.11| Zebrafish DNA sequence from clone CH211-228G24 in linkage group 14, complete sequence Length = 132912 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgtgtacccctacagaaacc 141 |||||||||||||||||||| Sbjct: 5193 cgtgtacccctacagaaacc 5174
>emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chromosome 13, complete sequence Length = 52119 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 gctgagaagaaggaaacact 586 |||||||||||||||||||| Sbjct: 33657 gctgagaagaaggaaacact 33676
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tgcaggagcgtgccaaaggc 46 |||||||||||||||||||| Sbjct: 3177183 tgcaggagcgtgccaaaggc 3177202
>gb|AC015820.10| Homo sapiens chromosome 11, clone RP11-108G3, complete sequence Length = 165149 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 aaatactaccactttgtgag 481 |||||||||||||||||||| Sbjct: 134883 aaatactaccactttgtgag 134902
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tgtcatgaagggcaagtacg 101 |||||||||||||||||||| Sbjct: 3201998 tgtcatgaagggcaagtacg 3202017
>gb|AF422165.1|AF422165 Hexamita inflata putative pyrophosphate-dependent phosphofructokinase (pp-pfk) gene, complete cds Length = 2369 Score = 40.1 bits (20), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 486 atgggtcgtnctgcttctcacat 508 ||||||||| ||||||||||||| Sbjct: 1050 atgggtcgttctgcttctcacat 1072
>gb|AC080004.12| Homo sapiens 3q BAC RP11-307O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 206162 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 aaatactaccactttgtgag 481 |||||||||||||||||||| Sbjct: 61865 aaatactaccactttgtgag 61846
>ref|XM_626992.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_830), partial mRNA Length = 801 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 agaagaaggaaacactcaag 590 |||||||||||||||||||| Sbjct: 411 agaagaaggaaacactcaag 430
>gb|AC012388.5| Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone BACR10P16, complete sequence Length = 171972 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 caagctgaagacacagtcaa 223 |||||||||||||||||||| Sbjct: 106088 caagctgaagacacagtcaa 106069
>gb|AC008289.5|AC008289 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone BACR04E05, complete sequence Length = 163012 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 caagctgaagacacagtcaa 223 |||||||||||||||||||| Sbjct: 72239 caagctgaagacacagtcaa 72258
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone BACR10P11, complete sequence Length = 164035 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 caagctgaagacacagtcaa 223 |||||||||||||||||||| Sbjct: 145020 caagctgaagacacagtcaa 145039
>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence Length = 184868 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 gctgagaagaaggaaacact 586 |||||||||||||||||||| Sbjct: 32351 gctgagaagaaggaaacact 32332
>gb|AC125455.3| Mus musculus BAC clone RP24-170L2 from chromosome 15, complete sequence Length = 145059 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actcaagaatgtcacagact 603 |||||||||||||||||||| Sbjct: 29621 actcaagaatgtcacagact 29640
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete sequence Length = 303438 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 caagctgaagacacagtcaa 223 |||||||||||||||||||| Sbjct: 106248 caagctgaagacacagtcaa 106229
>gb|AC004433.1|AC004433 Drosophila melanogaster, chromosome 2R, region 57B1-57B6, P1 clone DS03659, complete sequence Length = 85862 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 caagctgaagacacagtcaa 223 |||||||||||||||||||| Sbjct: 15411 caagctgaagacacagtcaa 15430
>gb|AF013986.1|AF013986 Entamoeba histolytica PPi-dependent phosphofructokinase (ehpfk) mRNA, complete cds Length = 1696 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 ttggtggtgatgattcaaacactaatgc 280 |||||||||||||||| || |||||||| Sbjct: 529 ttggtggtgatgattctaatactaatgc 556
>gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, complete sequence Length = 202377 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tgttgtcattggtggtgatg 264 |||||||||||||||||||| Sbjct: 168563 tgttgtcattggtggtgatg 168582
>dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT03D07, TM0180a, complete sequence Length = 76444 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agggacaagattgaaacacc 190 |||||||||||||||||||| Sbjct: 72554 agggacaagattgaaacacc 72573
>gb|M57300.1|DROADHM Drosophila mettleri alcohol dehydrogenase gene, complete cds, and alcohol dehydrogenase pseudogene, complete Length = 4616 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 caagggaggcccagctggtgtcat 87 |||||||||||||| ||||||||| Sbjct: 3418 caagggaggcccaggtggtgtcat 3441 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 caagggaggcccagctggtgtcat 87 |||||||||||||| ||||||||| Sbjct: 1293 caagggaggcccaggtggtgtcat 1316 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,156,161 Number of Sequences: 3902068 Number of extensions: 5156161 Number of successful extensions: 121059 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120851 Number of HSP's gapped (non-prelim): 200 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
