ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482160.1| Oryza sativa (japonica cultivar-group), mRNA 422 e-115
2dbj|AK058827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
4dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
5emb|Z23266.1|DMDEADBXA D.melanogaster DEAD-box gene, complete CDS 46 0.12
6ref|NM_057579.3| Drosophila melanogaster DEAD box protein 45A CG... 46 0.12
7gb|AY058728.1| Drosophila melanogaster LD47509 full length cDNA 46 0.12
8gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45... 46 0.12
9gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, r... 46 0.12
10gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 46 0.12
11gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, r... 46 0.12
12gb|L13612.1|DRODBP45A Drosophila melanogaster dead-box protein (... 46 0.12
13gb|AC155287.6| Mus musculus 6 BAC RP23-103G18 (Roswell Park Canc... 44 0.47
14gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cance... 44 0.47
15dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
16gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
17emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573... 42 1.8
18emb|AL844864.6| Mouse DNA sequence from clone RP23-360L8 on chro... 42 1.8
19gb|AC156802.7| Mus musculus BAC clone RP23-119P9 from chromosome... 40 7.3
20gb|AY723778.1| Saccharomyces cerevisiae clone FLH001719.01X YDR1... 40 7.3
21gb|AC146541.2| Gasterosteus aculeatus clone CH213-33P7, complete... 40 7.3
22ref|XM_581754.2| PREDICTED: Bos taurus similar to inhibitor of k... 40 7.3
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.3
24gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosom... 40 7.3
25gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.3
26emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M1... 40 7.3
27emb|Z50046.1|SC8358 S.cerevisiae chromosome IV cosmid 8358 40 7.3
28dbj|AK135026.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.3
29gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 40 7.3
30gb|AC099537.2| Homo sapiens chromosome 3 clone RP11-44E8, comple... 40 7.3
31gb|AC160103.2| Mus musculus BAC clone RP24-422I4 from chromosome... 40 7.3
32dbj|AK076669.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 7.3
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
35gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosom... 40 7.3
36gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, comple... 40 7.3
37gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 40 7.3
38emb|X06978.1|SCSWI5 Yeast SWI5 gene 40 7.3
39emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
40gb|AC168059.3| Mus musculus BAC clone RP23-283G7 from chromosome... 40 7.3
41emb|AL137228.4|CNS01DWJ Human chromosome 14 DNA sequence BAC R-3... 40 7.3 
>ref|XM_482160.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1345

 Score =  422 bits (213), Expect = e-115
 Identities = 423/493 (85%)
 Strand = Plus / Plus

                                                                       
Query: 45  atttgtctcggctgaagcaacatttgttagataaggaccttgaagaccaagaaaagatgg 104
           ||||| ||||| |||| || |||||| |||||||||||||||| || |||||||||||||
Sbjct: 4   atttggctcggttgaaacagcatttgctagataaggaccttgaggatcaagaaaagatgg 63

                                                                       
Query: 105 atgaagatagcaaagtcattgaagggttgcgggtaatctgtgagcagcaaagaactcata 164
           |||||||||||||| |||||||||   |||||| ||||||||| ||||||||  ||||||
Sbjct: 64  atgaagatagcaaactcattgaagaactgcgggcaatctgtgaccagcaaagggctcata 123

                                                                       
Query: 165 tagtgcagttagagagggcattaaaggttgagattacaaagcaggaggagagtaagaaga 224
           ||||||||||||| ||||| || ||| |||||||  | |||||||||||||| ||||| |
Sbjct: 124 tagtgcagttagaaagggctttgaagtttgagatggcgaagcaggaggagagcaagaaaa 183

                                                                       
Query: 225 ccataaatgatgaacgcttgaggtcaaatgaacagatagaagatctgcaatacaagcttg 284
            ||| | ||| |||| |  ||||||||||||||| |||  |||| || ||||||||||||
Sbjct: 184 tcattagtgaagaacaccagaggtcaaatgaacaaataacagatttgaaatacaagcttg 243

                                                                       
Query: 285 caaactgtatgagtgcacttgaatcaaaagatcaggaactgcttaatctgcagactgccc 344
           |||||||||||| ||| |||||||||||| | | |||| |||| ||||||||||||||||
Sbjct: 244 caaactgtatgaatgcccttgaatcaaaaaacctggaattgctaaatctgcagactgccc 303

                                                                       
Query: 345 ttggacagtactatgccgagagtgaagcaaaggaacgacttgggggtgatttagctatgg 404
           |||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 304 ttggacagtactatgctgagagtgaagccaaggaacggcttggaggtgatttagctatgg 363

                                                                       
Query: 405 ctagagaagcattggctaaattatctgagtcactggaggtggcaaatcaaggaaccgaaa 464
           | || |||| |||||||||||| || |||||| || ||||||||||||||| ||  ||||
Sbjct: 364 ccagggaagaattggctaaattgtcagagtcattgaaggtggcaaatcaagcaattgaaa 423

                                                                       
Query: 465 tttcaagaagggaaaaggacgaagtagttgccaaactttctcaagctgagatgatgttag 524
           |||||||||| |||||||| || |||| |||||  ||||| ||||  |||  |||||| |
Sbjct: 424 tttcaagaagagaaaaggaagaggtagctgccaggctttcacaagtggaggggatgttgg 483

                        
Query: 525 cggatgggaagcg 537
           | |||||||||||
Sbjct: 484 cagatgggaagcg 496
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>dbj|AK058827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-H08, full
           insert sequence
          Length = 1346

 Score =  422 bits (213), Expect = e-115
 Identities = 423/493 (85%)
 Strand = Plus / Plus

                                                                       
Query: 45  atttgtctcggctgaagcaacatttgttagataaggaccttgaagaccaagaaaagatgg 104
           ||||| ||||| |||| || |||||| |||||||||||||||| || |||||||||||||
Sbjct: 4   atttggctcggttgaaacagcatttgctagataaggaccttgaggatcaagaaaagatgg 63

                                                                       
Query: 105 atgaagatagcaaagtcattgaagggttgcgggtaatctgtgagcagcaaagaactcata 164
           |||||||||||||| |||||||||   |||||| ||||||||| ||||||||  ||||||
Sbjct: 64  atgaagatagcaaactcattgaagaactgcgggcaatctgtgaccagcaaagggctcata 123

                                                                       
Query: 165 tagtgcagttagagagggcattaaaggttgagattacaaagcaggaggagagtaagaaga 224
           ||||||||||||| ||||| || ||| |||||||  | |||||||||||||| ||||| |
Sbjct: 124 tagtgcagttagaaagggctttgaagtttgagatggcgaagcaggaggagagcaagaaaa 183

                                                                       
Query: 225 ccataaatgatgaacgcttgaggtcaaatgaacagatagaagatctgcaatacaagcttg 284
            ||| | ||| |||| |  ||||||||||||||| |||  |||| || ||||||||||||
Sbjct: 184 tcattagtgaagaacaccagaggtcaaatgaacaaataacagatttgaaatacaagcttg 243

                                                                       
Query: 285 caaactgtatgagtgcacttgaatcaaaagatcaggaactgcttaatctgcagactgccc 344
           |||||||||||| ||| |||||||||||| | | |||| |||| ||||||||||||||||
Sbjct: 244 caaactgtatgaatgcccttgaatcaaaaaacctggaattgctaaatctgcagactgccc 303

                                                                       
Query: 345 ttggacagtactatgccgagagtgaagcaaaggaacgacttgggggtgatttagctatgg 404
           |||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 304 ttggacagtactatgctgagagtgaagccaaggaacggcttggaggtgatttagctatgg 363

                                                                       
Query: 405 ctagagaagcattggctaaattatctgagtcactggaggtggcaaatcaaggaaccgaaa 464
           | || |||| |||||||||||| || |||||| || ||||||||||||||| ||  ||||
Sbjct: 364 ccagggaagaattggctaaattgtcagagtcattgaaggtggcaaatcaagcaattgaaa 423

                                                                       
Query: 465 tttcaagaagggaaaaggacgaagtagttgccaaactttctcaagctgagatgatgttag 524
           |||||||||| |||||||| || |||| |||||  ||||| ||||  |||  |||||| |
Sbjct: 424 tttcaagaagagaaaaggaagaggtagctgccaggctttcacaagtggaggggatgttgg 483

                        
Query: 525 cggatgggaagcg 537
           | |||||||||||
Sbjct: 484 cagatgggaagcg 496
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  278 bits (140), Expect = 2e-71
 Identities = 260/300 (86%)
 Strand = Plus / Plus

                                                                            
Query: 78       aggaccttgaagaccaagaaaagatggatgaagatagcaaagtcattgaagggttgcggg 137
                |||||||||| || ||||||||||||||||||||||||||| |||||||||   ||||||
Sbjct: 18259790 aggaccttgaggatcaagaaaagatggatgaagatagcaaactcattgaagaactgcggg 18259849

                                                                            
Query: 138      taatctgtgagcagcaaagaactcatatagtgcagttagagagggcattaaaggttgaga 197
                 ||||||||| ||||||||  ||||||||||||||||||| ||||| || ||| ||||||
Sbjct: 18259850 caatctgtgaccagcaaagggctcatatagtgcagttagaaagggctttgaagtttgaga 18259909

                                                                            
Query: 198      ttacaaagcaggaggagagtaagaagaccataaatgatgaacgcttgaggtcaaatgaac 257
                |  | |||||||||||||| ||||| | ||| | ||| |||| |  ||||||||||||||
Sbjct: 18259910 tggcgaagcaggaggagagcaagaaaatcattagtgaagaacaccagaggtcaaatgaac 18259969

                                                                            
Query: 258      agatagaagatctgcaatacaagcttgcaaactgtatgagtgcacttgaatcaaaagatc 317
                | |||  |||| || |||||||||||||||||||||||| ||| |||||||||||| | |
Sbjct: 18259970 aaataacagatttgaaatacaagcttgcaaactgtatgaatgcccttgaatcaaaaaacc 18260029

                                                                            
Query: 318      aggaactgcttaatctgcagactgcccttggacagtactatgccgagagtgaagcaaagg 377
                 |||| |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 18260030 tggaattgctaaatctgcagactgcccttggacagtactatgctgagagtgaagccaagg 18260089



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                            
Query: 375      aggaacgacttgggggtgatttagctatggctagagaagcattggctaaattatctgagt 434
                ||||||| ||||| ||||||||||||||||| || |||| |||||||||||| || ||||
Sbjct: 18260189 aggaacggcttggaggtgatttagctatggccagggaagaattggctaaattgtcagagt 18260248

                  
Query: 435      ca 436
                ||
Sbjct: 18260249 ca 18260250



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 81/97 (83%)
 Strand = Plus / Plus

                                                                            
Query: 441      aggtggcaaatcaaggaaccgaaatttcaagaagggaaaaggacgaagtagttgccaaac 500
                ||||||||||||||| ||  |||||||||||||| |||||||| || |||| |||||  |
Sbjct: 18260475 aggtggcaaatcaagcaattgaaatttcaagaagagaaaaggaagaggtagctgccaggc 18260534

                                                     
Query: 501      tttctcaagctgagatgatgttagcggatgggaagcg 537
                |||| ||||  |||  |||||| || |||||||||||
Sbjct: 18260535 tttcacaagtggaggggatgttggcagatgggaagcg 18260571
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>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0434E03
          Length = 142414

 Score =  278 bits (140), Expect = 2e-71
 Identities = 260/300 (86%)
 Strand = Plus / Plus

                                                                         
Query: 78    aggaccttgaagaccaagaaaagatggatgaagatagcaaagtcattgaagggttgcggg 137
             |||||||||| || ||||||||||||||||||||||||||| |||||||||   ||||||
Sbjct: 82102 aggaccttgaggatcaagaaaagatggatgaagatagcaaactcattgaagaactgcggg 82161

                                                                         
Query: 138   taatctgtgagcagcaaagaactcatatagtgcagttagagagggcattaaaggttgaga 197
              ||||||||| ||||||||  ||||||||||||||||||| ||||| || ||| ||||||
Sbjct: 82162 caatctgtgaccagcaaagggctcatatagtgcagttagaaagggctttgaagtttgaga 82221

                                                                         
Query: 198   ttacaaagcaggaggagagtaagaagaccataaatgatgaacgcttgaggtcaaatgaac 257
             |  | |||||||||||||| ||||| | ||| | ||| |||| |  ||||||||||||||
Sbjct: 82222 tggcgaagcaggaggagagcaagaaaatcattagtgaagaacaccagaggtcaaatgaac 82281

                                                                         
Query: 258   agatagaagatctgcaatacaagcttgcaaactgtatgagtgcacttgaatcaaaagatc 317
             | |||  |||| || |||||||||||||||||||||||| ||| |||||||||||| | |
Sbjct: 82282 aaataacagatttgaaatacaagcttgcaaactgtatgaatgcccttgaatcaaaaaacc 82341

                                                                         
Query: 318   aggaactgcttaatctgcagactgcccttggacagtactatgccgagagtgaagcaaagg 377
              |||| |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 82342 tggaattgctaaatctgcagactgcccttggacagtactatgctgagagtgaagccaagg 82401



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 375   aggaacgacttgggggtgatttagctatggctagagaagcattggctaaattatctgagt 434
             ||||||| ||||| ||||||||||||||||| || |||| |||||||||||| || ||||
Sbjct: 82501 aggaacggcttggaggtgatttagctatggccagggaagaattggctaaattgtcagagt 82560

               
Query: 435   ca 436
             ||
Sbjct: 82561 ca 82562



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 81/97 (83%)
 Strand = Plus / Plus

                                                                         
Query: 441   aggtggcaaatcaaggaaccgaaatttcaagaagggaaaaggacgaagtagttgccaaac 500
             ||||||||||||||| ||  |||||||||||||| |||||||| || |||| |||||  |
Sbjct: 82787 aggtggcaaatcaagcaattgaaatttcaagaagagaaaaggaagaggtagctgccaggc 82846

                                                  
Query: 501   tttctcaagctgagatgatgttagcggatgggaagcg 537
             |||| ||||  |||  |||||| || |||||||||||
Sbjct: 82847 tttcacaagtggaggggatgttggcagatgggaagcg 82883
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>emb|Z23266.1|DMDEADBXA D.melanogaster DEAD-box gene, complete CDS
          Length = 1997

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 469  aagaagggaaaaggacgaagtag 491
            |||||||||||||||||||||||
Sbjct: 1816 aagaagggaaaaggacgaagtag 1838
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>ref|NM_057579.3| Drosophila melanogaster DEAD box protein 45A CG12759-RA (Dbp45A),
            mRNA
          Length = 1661

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 469  aagaagggaaaaggacgaagtag 491
            |||||||||||||||||||||||
Sbjct: 1491 aagaagggaaaaggacgaagtag 1513
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>gb|AY058728.1| Drosophila melanogaster LD47509 full length cDNA
          Length = 1661

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 469  aagaagggaaaaggacgaagtag 491
            |||||||||||||||||||||||
Sbjct: 1491 aagaagggaaaaggacgaagtag 1513
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>gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45A-45A, BAC clone
             BACR08E17, complete sequence
          Length = 178262

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 469   aagaagggaaaaggacgaagtag 491
             |||||||||||||||||||||||
Sbjct: 32695 aagaagggaaaaggacgaagtag 32673
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>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone
             BACR10M14, complete sequence
          Length = 189757

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 469   aagaagggaaaaggacgaagtag 491
             |||||||||||||||||||||||
Sbjct: 17355 aagaagggaaaaggacgaagtag 17377
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>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
             sequence
          Length = 243313

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 469   aagaagggaaaaggacgaagtag 491
             |||||||||||||||||||||||
Sbjct: 24197 aagaagggaaaaggacgaagtag 24219
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>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones
             DS05998, DS07727, DS05175, and DS01885, complete sequence
          Length = 204617

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 469   aagaagggaaaaggacgaagtag 491
             |||||||||||||||||||||||
Sbjct: 24507 aagaagggaaaaggacgaagtag 24485
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>gb|L13612.1|DRODBP45A Drosophila melanogaster dead-box protein (dbp45A) gene, complete cds
          Length = 1997

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 469  aagaagggaaaaggacgaagtag 491
            |||||||||||||||||||||||
Sbjct: 1816 aagaagggaaaaggacgaagtag 1838
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>gb|AC155287.6| Mus musculus 6 BAC RP23-103G18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221335

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    ccaagaaaagatggatgaagat 112
             ||||||||||||||||||||||
Sbjct: 64053 ccaagaaaagatggatgaagat 64032
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>gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195726

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    ccaagaaaagatggatgaagat 112
             ||||||||||||||||||||||
Sbjct: 24388 ccaagaaaagatggatgaagat 24409
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 292      tatgagtgcacttgaatcaaaagat 316
                |||||||||| ||||||||||||||
Sbjct: 24628359 tatgagtgcatttgaatcaaaagat 24628335
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 292      tatgagtgcacttgaatcaaaagat 316
                |||||||||| ||||||||||||||
Sbjct: 24556565 tatgagtgcatttgaatcaaaagat 24556541
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>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143895

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 292   tatgagtgcacttgaatcaaaagat 316
             |||||||||| ||||||||||||||
Sbjct: 73225 tatgagtgcatttgaatcaaaagat 73201
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>emb|AL844864.6| Mouse DNA sequence from clone RP23-360L8 on chromosome X, complete
             sequence
          Length = 138582

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 301   acttgaatcaaaagatcagga 321
             |||||||||||||||||||||
Sbjct: 93578 acttgaatcaaaagatcagga 93558
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>gb|AC156802.7| Mus musculus BAC clone RP23-119P9 from chromosome 13, complete sequence
          Length = 209975

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   agcaggaggagagtaagaagacca 227
             ||||||||||| ||||||||||||
Sbjct: 14167 agcaggaggagggtaagaagacca 14190
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>gb|AY723778.1| Saccharomyces cerevisiae clone FLH001719.01X YDR146C gene, complete
            cds
          Length = 2130

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   gaagaccaagaaaagatgga 105
            ||||||||||||||||||||
Sbjct: 1952 gaagaccaagaaaagatgga 1971
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>gb|AC146541.2| Gasterosteus aculeatus clone CH213-33P7, complete sequence
          Length = 209797

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    agattacaaagcaggaggag 214
              ||||||||||||||||||||
Sbjct: 142112 agattacaaagcaggaggag 142093
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>ref|XM_581754.2| PREDICTED: Bos taurus similar to inhibitor of kappa light
           polypeptide gene enhancer in B-cells, kinase
           complex-associated protein (LOC505465), mRNA
          Length = 5534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 gttgagattacaaagcagga 210
           ||||||||||||||||||||
Sbjct: 402 gttgagattacaaagcagga 383
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 464      atttcaagaagggaaaagga 483
                ||||||||||||||||||||
Sbjct: 33048510 atttcaagaagggaaaagga 33048529
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>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence
          Length = 213684

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    caaatgaacagatagaagatctgc 272
              |||||||||||| |||||||||||
Sbjct: 179252 caaatgaacagagagaagatctgc 179229
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 144    gtgagcagcaaagaactcatatag 167
              ||||||||||||||||||| ||||
Sbjct: 654798 gtgagcagcaaagaactcacatag 654821
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>emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M11 on chromosome 1p31.1 Contains
             the 3' end of the SIAT7E gene for sialyltransferase 7
             ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,
             3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase)
             E, a novel gene and 3' end of the PIGK gene for
             phosphatidylinositol glycan class K, complete sequence
          Length = 138783

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   aaaagatcaggaactgctta 329
             ||||||||||||||||||||
Sbjct: 56640 aaaagatcaggaactgctta 56621
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>emb|Z50046.1|SC8358 S.cerevisiae chromosome IV cosmid 8358
          Length = 43468

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   gaagaccaagaaaagatgga 105
            ||||||||||||||||||||
Sbjct: 3278 gaagaccaagaaaagatgga 3259
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>dbj|AK135026.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430547G06
            product:unclassifiable, full insert sequence
          Length = 1944

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 249  caaatgaacagatagaagatctgc 272
            |||||||||||| |||||||||||
Sbjct: 1243 caaatgaacagagagaagatctgc 1266
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>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ctgcagactgcccttggaca 351
             ||||||||||||||||||||
Sbjct: 49244 ctgcagactgcccttggaca 49225
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>gb|AC099537.2| Homo sapiens chromosome 3 clone RP11-44E8, complete sequence
          Length = 156512

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 299   gcacttgaatcaaaagatcaggaa 322
             ||||||||||||| ||||||||||
Sbjct: 25227 gcacttgaatcaagagatcaggaa 25250
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>gb|AC160103.2| Mus musculus BAC clone RP24-422I4 from chromosome 13, complete sequence
          Length = 201998

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   agcaggaggagagtaagaagacca 227
             ||||||||||| ||||||||||||
Sbjct: 67872 agcaggaggagggtaagaagacca 67895
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>dbj|AK076669.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930408H07 product:unclassifiable, full
           insert sequence
          Length = 963

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 249 caaatgaacagatagaagatctgc 272
           |||||||||||| |||||||||||
Sbjct: 782 caaatgaacagagagaagatctgc 805
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 323      ctgcttaatctgcagactgc 342
                ||||||||||||||||||||
Sbjct: 30329511 ctgcttaatctgcagactgc 30329492
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 464      atttcaagaagggaaaagga 483
                ||||||||||||||||||||
Sbjct: 33139020 atttcaagaagggaaaagga 33139039
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>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete
             sequence
          Length = 207534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 249   caaatgaacagatagaagatctgc 272
             |||||||||||| |||||||||||
Sbjct: 87463 caaatgaacagagagaagatctgc 87440
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>gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, complete sequence
          Length = 169286

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aagcaacatttgttagataa 78
             ||||||||||||||||||||
Sbjct: 58052 aagcaacatttgttagataa 58071
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
             sequence
          Length = 139823

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   atttcaagaagggaaaagga 483
             ||||||||||||||||||||
Sbjct: 74798 atttcaagaagggaaaagga 74779
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>emb|X06978.1|SCSWI5 Yeast SWI5 gene
          Length = 3639

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   gaagaccaagaaaagatgga 105
            ||||||||||||||||||||
Sbjct: 3184 gaagaccaagaaaagatgga 3203
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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
             complete sequence
          Length = 160989

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   ctgcttaatctgcagactgc 342
             ||||||||||||||||||||
Sbjct: 79407 ctgcttaatctgcagactgc 79388
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>gb|AC168059.3| Mus musculus BAC clone RP23-283G7 from chromosome 13, complete sequence
          Length = 200413

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   agcaggaggagagtaagaagacca 227
             ||||||||||| ||||||||||||
Sbjct: 83559 agcaggaggagggtaagaagacca 83536
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>emb|AL137228.4|CNS01DWJ Human chromosome 14 DNA sequence BAC R-369N15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160901

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gaagaccaagaaaagatgga 105
             ||||||||||||||||||||
Sbjct: 61200 gaagaccaagaaaagatgga 61181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,924,960
Number of Sequences: 3902068
Number of extensions: 4924960
Number of successful extensions: 88449
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88199
Number of HSP's gapped (non-prelim): 250
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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