ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009295.1| Triticum aestivum clone wlm1.pk0005.d6:fis, full insert mRNA sequence Length = 1948 Score = 983 bits (496), Expect = 0.0 Identities = 553/572 (96%) Strand = Plus / Plus Query: 13 ctgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtc 72 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 327 ctgaaattgatggaattgggtctgcaggactgcgttgatgaaattgatgcacagcgtgtc 386 Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 446 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 447 ttccattcagatgtggctggcaggagctttcacaatggacggttcatacagaggatgcga 506 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 gaaaaggctgcatctttgcccaatgtccaactggagcaaggaacagttacatctttgctt 566 Query: 253 gaagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 gaagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaa 626 Query: 313 gcttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgccctt 372 ||||||||||||||||||||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 627 gcttatgcaccattgacaattgtatgtgatggctgcttttcaaacttaagacgtgccctt 686 Query: 373 tgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaa 432 ||||||||||||||||| || |||||||||||||| || || ||||||||||||||| || Sbjct: 687 tgctctccaaaggttgaggtgccgtcttgctttgttggcctggtcttggagaattgtgaa 746 Query: 433 cttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 cttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttac 806 Query: 493 ccgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcc 552 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 807 ccgataagcagcaccgaggttcgctgtttggtagatgtccctggtcagaaggtgccttcc 866 Query: 553 atagcaagtggtgaaatggcaaattatctcaa 584 |||||||||||||||||| ||||||||||||| Sbjct: 867 atagcaagtggtgaaatgacaaattatctcaa 898
>ref|XM_470614.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1815 Score = 603 bits (304), Expect = e-169 Identities = 505/572 (88%) Strand = Plus / Plus Query: 13 ctgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtc 72 ||||||||||| || |||||||| |||| |||||| | ||||| ||||| ||||||||| Sbjct: 340 ctgaaattgatcgagttgggtctcgaggattgtgttcaagaaatagatgctcagcgtgtc 399 Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 |||||||| || ||||||||||||||||| |||||||||| || || |||||||||||| Sbjct: 400 cttggttacgcgttattcaaagatgggaaagacacaaaactctcctatcccttggagaag 459 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 460 ttccactcagatgttgctggtaggagctttcacaatggacggtttatacagaggatgcgc 519 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 | ||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| ||| || Sbjct: 520 cagaaagctgcatctttgcctaatgttcaattggagcaaggaactgttacatcattggtt 579 Query: 253 gaagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaa 312 |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| Sbjct: 580 gaagaagatggtacagttaagggtgttaaatacaagaccaagtcaggtgaagaattaaaa 639 Query: 313 gcttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgccctt 372 || |||||||| |||||||||| ||||||||||| || || ||| | | || |||||| Sbjct: 640 gcatatgcacctctgacaattgtatgcgatggctgtttctcaaaccttcgccgcgccctt 699 Query: 373 tgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaa 432 ||||||||||||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 700 tgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaa 759 Query: 433 cttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttac 492 ||||||||||| ||||||||||||||| || ||||||||||||| || |||||||||||| Sbjct: 760 cttcctcatgcaaaccatggccatgttgtcctggccaatccttcacctatcctattttac 819 Query: 493 ccgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcc 552 || ||||||||||| || |||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 820 ccaataagcagcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttcc 879 Query: 553 atagcaagtggtgaaatggcaaattatctcaa 584 ||||||| |||||||||||||| |||||||| Sbjct: 880 atagcaaacggtgaaatggcaaaatatctcaa 911
>dbj|AK098895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P20, full insert sequence Length = 2011 Score = 603 bits (304), Expect = e-169 Identities = 505/572 (88%) Strand = Plus / Plus Query: 13 ctgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtc 72 ||||||||||| || |||||||| |||| |||||| | ||||| ||||| ||||||||| Sbjct: 504 ctgaaattgatcgagttgggtctcgaggattgtgttcaagaaatagatgctcagcgtgtc 563 Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 |||||||| || ||||||||||||||||| |||||||||| || || |||||||||||| Sbjct: 564 cttggttacgcgttattcaaagatgggaaagacacaaaactctcctatcccttggagaag 623 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 624 ttccactcagatgttgctggtaggagctttcacaatggacggtttatacagaggatgcgc 683 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 | ||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| ||| || Sbjct: 684 cagaaagctgcatctttgcctaatgttcaattggagcaaggaactgttacatcattggtt 743 Query: 253 gaagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaa 312 |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| Sbjct: 744 gaagaagatggtacagttaagggtgttaaatacaagaccaagtcaggtgaagaattaaaa 803 Query: 313 gcttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgccctt 372 || |||||||| |||||||||| ||||||||||| || || ||| | | || |||||| Sbjct: 804 gcatatgcacctctgacaattgtatgcgatggctgtttctcaaaccttcgccgcgccctt 863 Query: 373 tgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaa 432 ||||||||||||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 864 tgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaa 923 Query: 433 cttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttac 492 ||||||||||| ||||||||||||||| || ||||||||||||| || |||||||||||| Sbjct: 924 cttcctcatgcaaaccatggccatgttgtcctggccaatccttcacctatcctattttac 983 Query: 493 ccgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcc 552 || ||||||||||| || |||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 984 ccaataagcagcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttcc 1043 Query: 553 atagcaagtggtgaaatggcaaattatctcaa 584 ||||||| |||||||||||||| |||||||| Sbjct: 1044 atagcaaacggtgaaatggcaaaatatctcaa 1075
>dbj|AK065032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H02, full insert sequence Length = 2034 Score = 595 bits (300), Expect = e-167 Identities = 504/572 (88%) Strand = Plus / Plus Query: 13 ctgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtc 72 ||||||||||| || |||||||| |||| |||||| | ||||| ||||| ||||||||| Sbjct: 505 ctgaaattgatcgagttgggtctcgaggattgtgttcaagaaatagatgctcagcgtgtc 564 Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 |||||||| || ||||||||||||||||| |||||||||| || || |||||||||||| Sbjct: 565 cttggttacgcgttattcaaagatgggaaagacacaaaactctcctatcccttggagaag 624 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 625 ttccactcagatgttgctggtaggagctttcacaatggacggtttatacagaggatgcgc 684 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 | ||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| ||| || Sbjct: 685 cagaaagctgcatctttgcctaatgttcaattggagcaaggaactgttacatcattggtt 744 Query: 253 gaagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaa 312 |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| ||||| Sbjct: 745 gaagaagatggtacagttaagggtgttaaatacaagaccaagtcaggtggagaattaaaa 804 Query: 313 gcttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgccctt 372 || |||||||| |||||||||| ||||||||||| || || ||| | | || |||||| Sbjct: 805 gcatatgcacctctgacaattgtatgcgatggctgtttctcaaaccttcgccgcgccctt 864 Query: 373 tgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaa 432 ||||||||||||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 865 tgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaa 924 Query: 433 cttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttac 492 ||||||||||| ||||||||||||||| || ||||||||||||| || |||||||||||| Sbjct: 925 cttcctcatgcaaaccatggccatgttgtcctggccaatccttcacctatcctattttac 984 Query: 493 ccgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcc 552 || ||||||||||| || |||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 985 ccaataagcagcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttcc 1044 Query: 553 atagcaagtggtgaaatggcaaattatctcaa 584 ||||||| |||||||||||||| |||||||| Sbjct: 1045 atagcaaacggtgaaatggcaaaatatctcaa 1076
>ref|XM_470613.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1569 Score = 545 bits (275), Expect = e-152 Identities = 497/571 (87%) Strand = Plus / Plus Query: 14 tgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtcc 73 ||||||||||||| ||||||| |||| |||||||| ||||| ||||| |||||||||| Sbjct: 317 tgaaattgatggagctgggtcttgaggattgtgttgaagaaatcgatgctcagcgtgtcc 376 Query: 74 ttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaagt 133 ||||||| ||||| || |||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 377 ttggttacgcattgttgaaagatgggagaaacacaaagctttcttatcccttggagaagt 436 Query: 134 tccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgtg 193 ||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 437 tccattcagatgttgctggtaggagctttcacaatggacggtttatacagaagatgcgtc 496 Query: 194 aaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgcttg 253 ||||||||||||| ||||| ||||| || ||||||||||||| |||||||| ||||| | Sbjct: 497 aaaaagctgcatctttgcctaatgttcatttggagcaaggaaccgttacatcattgctcg 556 Query: 254 aagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaag 313 ||||| ||| || ||||||||||| |||||||||| ||||||||||||||| |||| | Sbjct: 557 aagaaggtggcacggttaagggtgttcaatacaagacaaagtcaggtgaagaattaaagg 616 Query: 314 cttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgcccttt 373 | |||||||||||||||||||| ||||||||||| || || ||| || |||||| ||| | Sbjct: 617 cctatgcaccattgacaattgtatgcgatggctgtttctcaaacctacggcgtgtcctgt 676 Query: 374 gctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaac 433 |||||||||||||||| || || || || ||||| ||| | || |||||||||||||||| Sbjct: 677 gctctccaaaggttgatgtgccatcctgttttgttgggttggttttggagaattgtcaac 736 Query: 434 ttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttacc 493 ||||||| | |||||||||||||||||| |||| |||||||| || ||||||| ||||| Sbjct: 737 ttcctcacccaaaccatggccatgttatcctggctaatccttcacctatcctatgttacc 796 Query: 494 cgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcca 553 ||||||||||||| ||| |||| |||||||| ||| ||||||| ||||||||||| |||| Sbjct: 797 cgataagcagcactgagattcgttgtttggttgatatccctgggcagaaggtgccttcca 856 Query: 554 tagcaagtggtgaaatggcaaattatctcaa 584 | |||| |||||||||||||| |||||||| Sbjct: 857 tggcaaccggtgaaatggcaaaatatctcaa 887
>dbj|AK073426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D18, full insert sequence Length = 2164 Score = 545 bits (275), Expect = e-152 Identities = 497/571 (87%) Strand = Plus / Plus Query: 14 tgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtcc 73 ||||||||||||| ||||||| |||| |||||||| ||||| ||||| |||||||||| Sbjct: 393 tgaaattgatggagctgggtcttgaggattgtgttgaagaaatcgatgctcagcgtgtcc 452 Query: 74 ttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaagt 133 ||||||| ||||| || |||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 453 ttggttacgcattgttgaaagatgggagaaacacaaagctttcttatcccttggagaagt 512 Query: 134 tccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgtg 193 ||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 513 tccattcagatgttgctggtaggagctttcacaatggacggtttatacagaagatgcgtc 572 Query: 194 aaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgcttg 253 ||||||||||||| ||||| ||||| || ||||||||||||| |||||||| ||||| | Sbjct: 573 aaaaagctgcatctttgcctaatgttcatttggagcaaggaaccgttacatcattgctcg 632 Query: 254 aagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaag 313 ||||| ||| || ||||||||||| |||||||||| ||||||||||||||| |||| | Sbjct: 633 aagaaggtggcacggttaagggtgttcaatacaagacaaagtcaggtgaagaattaaagg 692 Query: 314 cttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgcccttt 373 | |||||||||||||||||||| ||||||||||| || || ||| || |||||| ||| | Sbjct: 693 cctatgcaccattgacaattgtatgcgatggctgtttctcaaacctacggcgtgtcctgt 752 Query: 374 gctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaac 433 |||||||||||||||| || || || || ||||| ||| | || |||||||||||||||| Sbjct: 753 gctctccaaaggttgatgtgccatcctgttttgttgggttggttttggagaattgtcaac 812 Query: 434 ttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttacc 493 ||||||| | |||||||||||||||||| |||| |||||||| || ||||||| ||||| Sbjct: 813 ttcctcacccaaaccatggccatgttatcctggctaatccttcacctatcctatgttacc 872 Query: 494 cgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcca 553 ||||||||||||| ||| |||| |||||||| ||| ||||||| ||||||||||| |||| Sbjct: 873 cgataagcagcactgagattcgttgtttggttgatatccctgggcagaaggtgccttcca 932 Query: 554 tagcaagtggtgaaatggcaaattatctcaa 584 | |||| |||||||||||||| |||||||| Sbjct: 933 tggcaaccggtgaaatggcaaaatatctcaa 963
>dbj|AK068401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F23, full insert sequence Length = 3149 Score = 537 bits (271), Expect = e-149 Identities = 496/571 (86%) Strand = Plus / Plus Query: 14 tgaaattgatggaattgggtctgcaggactgtgttgatgaaattgatgcacagcgtgtcc 73 ||||||||||||| ||||||| |||| |||||||| ||||| ||||| |||||||||| Sbjct: 1627 tgaaattgatggagctgggtcttgaggattgtgttgaagaaatcgatgctcagcgtgtcc 1686 Query: 74 ttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaagt 133 ||||||| ||||| || ||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 1687 ttggttacgcattgttgcaagatgggagaaacacaaagctttcttatcccttggagaagt 1746 Query: 134 tccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgtg 193 ||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 1747 tccattcagatgttgctggtaggagctttcacaatggacggtttatacagaagatgcgtc 1806 Query: 194 aaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgcttg 253 ||||||||||||| ||||| ||||| || ||||||||||||| |||||||| ||||| | Sbjct: 1807 aaaaagctgcatctttgcctaatgttcatttggagcaaggaaccgttacatcattgctcg 1866 Query: 254 aagaaaatggtacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaag 313 ||||| ||| || ||||||||||| |||||||||| ||||||||||||||| |||| | Sbjct: 1867 aagaaggtggcacggttaagggtgttcaatacaagacaaagtcaggtgaagaattaaagg 1926 Query: 314 cttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgcccttt 373 | |||||||||||||||||||| ||||||||||| || || ||| || |||||| ||| | Sbjct: 1927 cctatgcaccattgacaattgtatgcgatggctgtttctcaaacctacggcgtgtcctgt 1986 Query: 374 gctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaac 433 |||||||||||||||| || || || || ||||| ||| | || |||||||||||||||| Sbjct: 1987 gctctccaaaggttgatgtgccatcctgttttgttgggttggttttggagaattgtcaac 2046 Query: 434 ttcctcatgcgaaccatggccatgttatcttggccaatccttctcccatcctattttacc 493 ||||||| | |||||||||||||||||| |||| |||||||| || ||||||| ||||| Sbjct: 2047 ttcctcacccaaaccatggccatgttatcctggctaatccttcacctatcctatgttacc 2106 Query: 494 cgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctcca 553 ||||||||||||| ||| |||| |||||||| ||| ||||||| ||||||||||| |||| Sbjct: 2107 cgataagcagcactgagattcgttgtttggttgatatccctgggcagaaggtgccttcca 2166 Query: 554 tagcaagtggtgaaatggcaaattatctcaa 584 | |||| |||||||||||||| |||||||| Sbjct: 2167 tggcaaccggtgaaatggcaaaatatctcaa 2197
>dbj|AK061945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E03, full insert sequence Length = 1273 Score = 351 bits (177), Expect = 2e-93 Identities = 285/321 (88%) Strand = Plus / Plus Query: 264 tacagttaagggtgtgcaatacaagatcaagtcaggtgaagaactaaaagcttatgcacc 323 ||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 1 tacagttaagggtgttaaatacaagaccaagtcaggtgaagaattaaaagcatatgcacc 60 Query: 324 attgacaattgtgtgcgatggctgcttttcgaacttaaggcgtgccctttgctctccaaa 383 |||||||||| ||||||||||| || || ||| | | || ||||||||||||||||| Sbjct: 61 tctgacaattgtatgcgatggctgtttctcaaaccttcgccgcgccctttgctctccaaa 120 Query: 384 ggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatgc 443 |||||| ||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 121 ggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatgc 180 Query: 444 gaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagcag 503 ||||||||||||||| || ||||||||||||| || |||||||||||||| |||||||| Sbjct: 181 aaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagcag 240 Query: 504 caccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtgg 563 ||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| || Sbjct: 241 cactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacgg 300 Query: 564 tgaaatggcaaattatctcaa 584 |||||||||||| |||||||| Sbjct: 301 tgaaatggcaaaatatctcaa 321
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 242 bits (122), Expect = 1e-60 Identities = 182/202 (90%) Strand = Plus / Minus Query: 383 aggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatg 442 ||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 6928785 aggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatg 6928726 Query: 443 cgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagca 502 | ||||||||||||||| || ||||||||||||| || |||||||||||||| ||||||| Sbjct: 6928725 caaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagca 6928666 Query: 503 gcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtg 562 |||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| | Sbjct: 6928665 gcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacg 6928606 Query: 563 gtgaaatggcaaattatctcaa 584 ||||||||||||| |||||||| Sbjct: 6928605 gtgaaatggcaaaatatctcaa 6928584 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||| Sbjct: 6924525 tgtgttgaagaaatcgatgctcagcgtgtccttggttacgcattgttgaaagatgggaga 6924466 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 6924465 aacacaaagctttcttatcccttggagaagttccattcagatgttgctggtaggagcttt 6924406 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 ||||||||||| |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 6924405 cacaatggacggtttatacagaagatgcgtcaaaaagctgcatctttgcc 6924356 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||| | ||||| ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 6929485 tgtgttcaagaaatagatgctcagcgtgtccttggttacgcgttattcaaagatgggaaa 6929426 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 |||||||||| || || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 6929425 gacacaaaactctcctatcccttggagaagttccactcagatgttgctggtaggagcttt 6929366 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 ||||||||||| ||||||||||||||||| | ||||||||||| ||||| Sbjct: 6929365 cacaatggacggtttatacagaggatgcgccagaaagctgcatctttgcc 6929316 Score = 180 bits (91), Expect = 3e-42 Identities = 148/167 (88%) Strand = Plus / Minus Query: 418 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 477 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 6923763 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 6923704 Query: 478 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 537 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 6923703 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 6923644 Query: 538 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaa 584 ||||||||||| ||||| |||| |||||||||||||| |||||||| Sbjct: 6923643 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaa 6923597 Score = 165 bits (83), Expect = 2e-37 Identities = 143/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||| ||| Sbjct: 6929023 tggagcaaggaactgttacatcattggttgaagaagatggtacagttaagggtgttaaat 6928964 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| |||||||||||||||| ||||||| |||||||| |||||||||| ||||||| Sbjct: 6928963 acaagaccaagtcaggtgaagaattaaaagcatatgcacctctgacaattgtatgcgatg 6928904 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| | | || |||||||||||||||||||| Sbjct: 6928903 gctgtttctcaaaccttcgccgcgccctttgctctccaaaggt 6928861 Score = 157 bits (79), Expect = 5e-35 Identities = 142/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||||| |||||| ||| || ||||||||||| |||| Sbjct: 6924060 tggagcaaggaaccgttacatcattgctcgaagaaggtggcacggttaagggtgttcaat 6924001 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 6924000 acaagacaaagtcaggtgaagaattaaaggcctatgcaccattgacaattgtatgcgatg 6923941 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| || |||||| ||| |||||||||||||| Sbjct: 6923940 gctgtttctcaaacctacggcgtgtcctgtgctctccaaaggt 6923898
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 242 bits (122), Expect = 1e-60 Identities = 182/202 (90%) Strand = Plus / Minus Query: 383 aggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatg 442 ||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 6926680 aggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatg 6926621 Query: 443 cgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagca 502 | ||||||||||||||| || ||||||||||||| || |||||||||||||| ||||||| Sbjct: 6926620 caaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagca 6926561 Query: 503 gcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtg 562 |||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| | Sbjct: 6926560 gcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacg 6926501 Query: 563 gtgaaatggcaaattatctcaa 584 ||||||||||||| |||||||| Sbjct: 6926500 gtgaaatggcaaaatatctcaa 6926479 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||| Sbjct: 6922420 tgtgttgaagaaatcgatgctcagcgtgtccttggttacgcattgttgaaagatgggaga 6922361 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 6922360 aacacaaagctttcttatcccttggagaagttccattcagatgttgctggtaggagcttt 6922301 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 ||||||||||| |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 6922300 cacaatggacggtttatacagaagatgcgtcaaaaagctgcatctttgcc 6922251 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||| | ||||| ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 6927380 tgtgttcaagaaatagatgctcagcgtgtccttggttacgcgttattcaaagatgggaaa 6927321 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 |||||||||| || || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 6927320 gacacaaaactctcctatcccttggagaagttccactcagatgttgctggtaggagcttt 6927261 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 ||||||||||| ||||||||||||||||| | ||||||||||| ||||| Sbjct: 6927260 cacaatggacggtttatacagaggatgcgccagaaagctgcatctttgcc 6927211 Score = 180 bits (91), Expect = 3e-42 Identities = 148/167 (88%) Strand = Plus / Minus Query: 418 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 477 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 6921658 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 6921599 Query: 478 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 537 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 6921598 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 6921539 Query: 538 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaa 584 ||||||||||| ||||| |||| |||||||||||||| |||||||| Sbjct: 6921538 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaa 6921492 Score = 165 bits (83), Expect = 2e-37 Identities = 143/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||| ||| Sbjct: 6926918 tggagcaaggaactgttacatcattggttgaagaagatggtacagttaagggtgttaaat 6926859 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| |||||||||||||||| ||||||| |||||||| |||||||||| ||||||| Sbjct: 6926858 acaagaccaagtcaggtgaagaattaaaagcatatgcacctctgacaattgtatgcgatg 6926799 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| | | || |||||||||||||||||||| Sbjct: 6926798 gctgtttctcaaaccttcgccgcgccctttgctctccaaaggt 6926756 Score = 157 bits (79), Expect = 5e-35 Identities = 142/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||||| |||||| ||| || ||||||||||| |||| Sbjct: 6921955 tggagcaaggaaccgttacatcattgctcgaagaaggtggcacggttaagggtgttcaat 6921896 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 6921895 acaagacaaagtcaggtgaagaattaaaggcctatgcaccattgacaattgtatgcgatg 6921836 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| || |||||| ||| |||||||||||||| Sbjct: 6921835 gctgtttctcaaacctacggcgtgtcctgtgctctccaaaggt 6921793
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 242 bits (122), Expect = 1e-60 Identities = 182/202 (90%) Strand = Plus / Minus Query: 383 aggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatg 442 ||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 95382 aggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatg 95323 Query: 443 cgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagca 502 | ||||||||||||||| || ||||||||||||| || |||||||||||||| ||||||| Sbjct: 95322 caaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagca 95263 Query: 503 gcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtg 562 |||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| | Sbjct: 95262 gcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacg 95203 Query: 563 gtgaaatggcaaattatctcaa 584 ||||||||||||| |||||||| Sbjct: 95202 gtgaaatggcaaaatatctcaa 95181 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||| Sbjct: 91122 tgtgttgaagaaatcgatgctcagcgtgtccttggttacgcattgttgaaagatgggaga 91063 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 91062 aacacaaagctttcttatcccttggagaagttccattcagatgttgctggtaggagcttt 91003 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 ||||||||||| |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 91002 cacaatggacggtttatacagaagatgcgtcaaaaagctgcatctttgcc 90953 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||| | ||||| ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 96082 tgtgttcaagaaatagatgctcagcgtgtccttggttacgcgttattcaaagatgggaaa 96023 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 |||||||||| || || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 96022 gacacaaaactctcctatcccttggagaagttccactcagatgttgctggtaggagcttt 95963 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 ||||||||||| ||||||||||||||||| | ||||||||||| ||||| Sbjct: 95962 cacaatggacggtttatacagaggatgcgccagaaagctgcatctttgcc 95913 Score = 180 bits (91), Expect = 3e-42 Identities = 148/167 (88%) Strand = Plus / Minus Query: 418 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 477 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 90360 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 90301 Query: 478 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 537 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 90300 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 90241 Query: 538 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaa 584 ||||||||||| ||||| |||| |||||||||||||| |||||||| Sbjct: 90240 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaa 90194 Score = 165 bits (83), Expect = 2e-37 Identities = 143/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||| ||| Sbjct: 95620 tggagcaaggaactgttacatcattggttgaagaagatggtacagttaagggtgttaaat 95561 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| |||||||||||||||| ||||||| |||||||| |||||||||| ||||||| Sbjct: 95560 acaagaccaagtcaggtgaagaattaaaagcatatgcacctctgacaattgtatgcgatg 95501 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| | | || |||||||||||||||||||| Sbjct: 95500 gctgtttctcaaaccttcgccgcgccctttgctctccaaaggt 95458 Score = 157 bits (79), Expect = 5e-35 Identities = 142/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||||| |||||| ||| || ||||||||||| |||| Sbjct: 90657 tggagcaaggaaccgttacatcattgctcgaagaaggtggcacggttaagggtgttcaat 90598 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 90597 acaagacaaagtcaggtgaagaattaaaggcctatgcaccattgacaattgtatgcgatg 90538 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| || |||||| ||| |||||||||||||| Sbjct: 90537 gctgtttctcaaacctacggcgtgtcctgtgctctccaaaggt 90495
>gb|AY104774.1| Zea mays PCO148653 mRNA sequence Length = 1228 Score = 234 bits (118), Expect = 3e-58 Identities = 211/242 (87%) Strand = Plus / Plus Query: 343 ggctgcttttcgaacttaaggcgtgccctttgctctccaaaggttgaagtaccgtcttgc 402 ||||||||||| || || |||||||||||||||||||||| ||||| || || || || Sbjct: 7 ggctgcttttcaaatctacggcgtgccctttgctctccaaaagttgatgttccatcatgt 66 Query: 403 tttgtagggcttgtcttggagaattgtcaacttcctcatgcgaaccatggccatgttatc 462 ||| | ||||| || ||||||||||| |||||||| ||| | |||||||||||||||||| Sbjct: 67 tttattgggctggtattggagaattgccaacttccacatccaaaccatggccatgttatc 126 Query: 463 ttggccaatccttctcccatcctattttacccgataagcagcaccgaggttcgctgtttg 522 |||||||||||||| || || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 127 ttggccaatccttcgccaatactattttacccaattagcagcacagaggtgcgctgtttg 186 Query: 523 gtagatgtccctggccagaaggtgccctccatagcaagtggtgaaatggcaaattatctc 582 || |||||||| || ||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 187 gttgatgtcccaggtcagaaggtgccttccatagctagcggtgaaatggcaaattatctc 246 Query: 583 aa 584 || Sbjct: 247 aa 248
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 180 bits (91), Expect = 3e-42 Identities = 148/167 (88%) Strand = Plus / Minus Query: 418 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 477 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 119696 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 119637 Query: 478 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 537 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 119636 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 119577 Query: 538 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaa 584 ||||||||||| ||||| |||| |||||||||||||| |||||||| Sbjct: 119576 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaa 119530 Score = 157 bits (79), Expect = 5e-35 Identities = 142/163 (87%) Strand = Plus / Minus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaat 283 ||||||||||||| |||||||| ||||| |||||| ||| || ||||||||||| |||| Sbjct: 119993 tggagcaaggaaccgttacatcattgctcgaagaaggtggcacggttaagggtgttcaat 119934 Query: 284 acaagatcaagtcaggtgaagaactaaaagcttatgcaccattgacaattgtgtgcgatg 343 |||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 119933 acaagacaaagtcaggtgaagaattaaaggcctatgcaccattgacaattgtatgcgatg 119874 Query: 344 gctgcttttcgaacttaaggcgtgccctttgctctccaaaggt 386 |||| || || ||| || |||||| ||| |||||||||||||| Sbjct: 119873 gctgtttctcaaacctacggcgtgtcctgtgctctccaaaggt 119831 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 112 ctttcttaccccttggagaagttccattcagatgtggctggcaggagctttcacaatgga 171 |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 120389 ctttcttatcccttggagaagttccattcagatgttgctggtaggagctttcacaatgga 120330 Query: 172 cgatttatacagaggatgcgtgaaaaagctgcatcattgcc 212 || |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 120329 cggtttatacagaagatgcgtcaaaaagctgcatctttgcc 120289
>gb|AY995182.1| Datura innoxia squalene monooxygenase mRNA, complete cds Length = 1990 Score = 123 bits (62), Expect = 7e-25 Identities = 221/274 (80%) Strand = Plus / Plus Query: 53 aaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaagaacacaaaac 112 |||||||||| || || || |||| |||||| | ||||| |||||||||| |||| | Sbjct: 445 aaattgatgctcaacgagtgtttgggtatgcacttttcaaggatgggaagagcacacgtc 504 Query: 113 tttcttaccccttggagaagttccattcagatgtggctggcaggagctttcacaatggac 172 ||||||| ||| ||||||| || || || ||||| ||||| ||||||||||||||||| | Sbjct: 505 tttcttatcccctggagaaatttcactctgatgttgctggaaggagctttcacaatgggc 564 Query: 173 gatttatacagaggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaag 232 | || || || || ||||| || ||||||||||| | ||||||||| |||| ||||||| Sbjct: 565 gtttcattcaaagaatgcgagagaaagctgcatctcttcccaatgtcaaactagagcaag 624 Query: 233 gaacagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaatacaagatca 292 | || ||||| ||| |||||||||||||||| || |||| ||||| || ||||| | | Sbjct: 625 gcactgttacgtctctgcttgaagaaaatgggaccattaaaggtgttcagtacaaaacta 684 Query: 293 agtcaggtgaagaactaaaagcttatgcaccatt 326 | || |||||||| | ||||| ||||||||||| Sbjct: 685 aatctggtgaagagttgaaagcgtatgcaccatt 718 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 379 ccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcct 438 |||||||| ||||| || ||||| ||||| || |||||| ||||||| || || ||||| Sbjct: 771 ccaaaggtagaagtgccttcttgttttgttggtcttgtcctggagaactgccagcttcca 830 Query: 439 catgcgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgata 498 |||| || ||||| ||||| || ||||| |||| || || ||| | || || || ||| Sbjct: 831 catgaaaatcatggacatgtcattttggcagatccatcacctatcttgttctatcccata 890 Query: 499 agcagcaccgaggttcgctgtttggtagatgtccctgg 536 ||||| || |||||||||||| |||| ||||| ||||| Sbjct: 891 agcagtactgaggttcgctgtctggttgatgtacctgg 928
>emb|AJ430608.1|MTR430608 Medicago truncatula mRNA for squalene monooxygenase 2 (sqp2 gene) Length = 1912 Score = 101 bits (51), Expect = 3e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 115 tcttaccccttggagaagttccattcagatgtggctggcaggagctttcacaatggacga 174 ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||||| || Sbjct: 552 tcttatcccttggaaaagtttcactcagatgtctctggcagaagctttcacaatgggcgt 611 Query: 175 tttatacagaggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaagga 234 ||||| ||||||||||| || |||||||| ||| | |||||||| | ||||||||||| Sbjct: 612 tttattcagaggatgcgagagaaagctgcctcacttcccaatgtaaatatggagcaagga 671 Query: 235 acagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaatacaaga 289 ||||| | || | |||||||| || || ||| | || |||||||||||||||| Sbjct: 672 acagtcatttccctacttgaagagaaggggacaatcaaaggtgtgcaatacaaga 726
>gb|BT013525.1| Lycopersicon esculentum clone 132243F, mRNA sequence Length = 1986 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||||| || |||||||| ||||| || |||| ||||| | ||||| ||||| ||| Sbjct: 407 tgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaag 466 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 | |||||| |||| || |||||| | || |||||||| ||||||||||| || |||||| Sbjct: 467 agcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagcttt 526 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagc 200 |||||||| || || ||||||| |||| | |||||||| Sbjct: 527 cacaatgggcgcttcatacagaagatgagagaaaaagc 564 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 445 aaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagcagc 504 |||||||| |||||||| |||| |||||||||||||| ||||||| || || || ||| Sbjct: 815 aaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagc 874 Query: 505 accgaggttcgctgtttggtagatgtccctgg 536 || || ||||||| ||||| ||||| ||||| Sbjct: 875 acggaaattcgctgcttggtcgatgtacctgg 906
>gb|AF167426.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase (ACS7B) and putative squalene epoxidase (ERG) genes, complete cds Length = 13830 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Minus Query: 43 tgtgttgatgaaattgatgcacagcgtgtccttggttatgcattattcaaagatgggaag 102 |||||||| || |||||||| ||||| || |||| ||||| | ||||| ||||| ||| Sbjct: 11750 tgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaag 11691 Query: 103 aacacaaaactttcttaccccttggagaagttccattcagatgtggctggcaggagcttt 162 | |||||| |||| || |||||| | || |||||||| ||||||||||| || |||||| Sbjct: 11690 agcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagcttt 11631 Query: 163 cacaatggacgatttatacagaggatgcgtgaaaaagc 200 |||||||| || || ||||||| |||| | |||||||| Sbjct: 11630 cacaatgggcgcttcatacagaagatgagagaaaaagc 11593 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 445 aaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagcagc 504 |||||||| |||||||| |||| |||||||||||||| ||||||| || || || ||| Sbjct: 10978 aaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagc 10919 Query: 505 accgaggttcgctgtttggtagatgtccctgg 536 || || ||||||| ||||| ||||| ||||| Sbjct: 10918 acggaaattcgctgcttggtcgatgtacctgg 10887
>ref|NM_104624.3| Arabidopsis thaliana XF1; oxidoreductase AT1G58440 (XF1) mRNA, complete cds Length = 1892 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 483 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 542 Query: 184 aggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagtt 240 || ||||| || |||||||| ||| | |||||||| || || ||||||||||||||| Sbjct: 543 agaatgcgggagaaagctgcttcacttcccaatgttcagctagagcaaggaacagtt 599
>gb|BT000239.1| Arabidopsis thaliana squalene monooxygenase, putative (At1g58440) mRNA, complete cds Length = 1672 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 439 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 498 Query: 184 aggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagtt 240 || ||||| || |||||||| ||| | |||||||| || || ||||||||||||||| Sbjct: 499 agaatgcgggagaaagctgcttcacttcccaatgttcagctagagcaaggaacagtt 555
>gb|AY099643.1| Arabidopsis thaliana squalene monooxygenase, putative (At1g58440) mRNA, complete cds Length = 1799 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 483 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 542 Query: 184 aggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagtt 240 || ||||| || |||||||| ||| | |||||||| || || ||||||||||||||| Sbjct: 543 agaatgcgggagaaagctgcttcacttcccaatgttcagctagagcaaggaacagtt 599
>emb|BX814705.1|CNS0AELG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZH03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1834 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 468 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 527 Query: 184 aggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagtt 240 || ||||| || |||||||| ||| | |||||||| || || ||||||||||||||| Sbjct: 528 agaatgcgggagaaagctgcttcacttcccaatgttcagctagagcaaggaacagtt 584
>dbj|AB008021.1| Arabidopsis thaliana XF1 mRNA, complete cds Length = 1800 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 467 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 526 Query: 184 aggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagtt 240 || ||||| || |||||||| ||| | |||||||| || || ||||||||||||||| Sbjct: 527 agaatgcgggagaaagctgcttcacttcccaatgttcagctagagcaaggaacagtt 583
>ref|NM_119938.3| Arabidopsis thaliana oxidoreductase AT4G37760 mRNA, complete cds Length = 2028 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 568 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 627 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 628 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 687 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 || |||||| | | | | |||||||| | | |||||||||||||||| ||||| ||| | Sbjct: 688 gagaaagcttctttacttcccaatgttcgaatggagcaaggaacagtgacatcgttggtg 747 Query: 253 gaagaaaa 260 |||||||| Sbjct: 748 gaagaaaa 755
>gb|BT001057.1| Arabidopsis thaliana At4g37760/T28I19_40 mRNA, complete cds Length = 1578 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 370 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 429 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 430 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 489 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 || |||||| | | | | |||||||| | | |||||||||||||||| ||||| ||| | Sbjct: 490 gagaaagcttctttacttcccaatgttcgaatggagcaaggaacagtgacatcgttggtg 549 Query: 253 gaagaaaa 260 |||||||| Sbjct: 550 gaagaaaa 557
>gb|AY072019.1| Arabidopsis thaliana AT4g37760/T28I19_40 mRNA, complete cds Length = 1837 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 458 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 517 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 518 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 577 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 || |||||| | | | | |||||||| | | |||||||||||||||| ||||| ||| | Sbjct: 578 gagaaagcttctttacttcccaatgttcgaatggagcaaggaacagtgacatcgttggtg 637 Query: 253 gaagaaaa 260 |||||||| Sbjct: 638 gaagaaaa 645
>gb|BT013842.1| Lycopersicon esculentum clone 132799F, mRNA sequence Length = 1978 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 112 ctttcttaccccttggagaagttccattcagatgtggctggcaggagctttcacaatgga 171 |||||||| ||| ||||||| || || || ||||| |||| |||||||| |||||||| Sbjct: 620 ctttcttatcccctggagaaatttcactctgatgtttctggaaggagcttccacaatggg 679 Query: 172 cgatttatacagaggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaa 231 || || || || || ||||| || ||||||||| | | ||||||||| |||| |||||| Sbjct: 680 cgtttcattcaaagaatgcgagagaaagctgcagctcttcccaatgtcaaactcgagcaa 739 Query: 232 ggaacagttacatctttgcttgaagaaaa 260 || || ||||| ||| ||||||||||||| Sbjct: 740 ggcactgttacgtctctgcttgaagaaaa 768
>emb|AJ430609.1|MTR430609 Medicago truncatula mRNA for squalene monooxygenase 1 (sqp1 gene) Length = 1848 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 115 tcttaccccttggagaagttccattcagatgtggctggcaggagctttcacaatggacga 174 ||||| |||||||| ||||| || |||||| | ||||| || |||||||||||||| || Sbjct: 528 tcttatcccttggaaaagtttcactcagatatcgctggaagaagctttcacaatgggcgt 587 Query: 175 tttatacagaggatgcgtgaaaaagctgcatcattgcccaatgtccaactggagcaagga 234 ||||| | ||| ||| | || |||||||| || | |||||||| | ||||||||||| Sbjct: 588 tttattctgagaatgagagagaaagctgcctcccttcccaatgtacggttggagcaagga 647 Query: 235 acagttacatctttgcttgaagaaaatggtacagttaagggtgtgcaatacaa 287 ||||| || || |||| ||||| ||||||||| |||| ||||| || ||||| Sbjct: 648 acagtcacttccctgctcgaagagaatggtacaattaaaggtgtacagtacaa 700 Score = 40.1 bits (20), Expect = 7.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 512 ttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtggtgaaatgg 571 |||||||| |||| ||||| ||||| |||||||| || || || | | ||||||||||| Sbjct: 925 ttcgctgtctggttgatgttcctggtcagaaggttccatctatttccaatggtgaaatgg 984 Query: 572 caaa 575 |||| Sbjct: 985 caaa 988
>emb|BX827194.1|CNS0A48X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2018 Score = 71.9 bits (36), Expect = 2e-09 Identities = 150/188 (79%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 568 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 627 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 628 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 687 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 || | |||| | | | | |||||||| | | |||||||||||||||| ||||| ||| | Sbjct: 688 gagagagcttctttacttcccaatgttcgaatggagcaaggaacagtgacatcgttggtg 747 Query: 253 gaagaaaa 260 |||||||| Sbjct: 748 gaagaaaa 755
>gb|AY084818.1| Arabidopsis thaliana clone 118648 mRNA, complete sequence Length = 1836 Score = 71.9 bits (36), Expect = 2e-09 Identities = 150/188 (79%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 450 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 509 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 510 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 569 Query: 193 gaaaaagctgcatcattgcccaatgtccaactggagcaaggaacagttacatctttgctt 252 || |||||| | | | | |||||||| | | || ||||||||||||| ||||| ||| | Sbjct: 570 gagaaagcttctttacttcccaatgttcgaatgaagcaaggaacagtgacatcgttggtg 629 Query: 253 gaagaaaa 260 |||||||| Sbjct: 630 gaagaaaa 637
>gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete sequence Length = 118803 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 418 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 477 |||||||||||| | ||||| ||||| || ||||| ||||||||||||| ||||||| Sbjct: 94682 ttggagaattgtaatcttccacatgcaaatcatggacatgttatcttgggtgatccttca 94741 Query: 478 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgt 530 || || | |||||||| ||||| || |||||| |||| |||||||| ||||| Sbjct: 94742 ccaattttgttttaccctataagtagtaccgagattcgttgtttggttgatgt 94794 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 94 gatgggaagaacacaaaactttcttaccccttggagaagttccattcagatgtggctggc 153 |||||||| || || ||||| ||||| |||||||| |||||| | || ||||| |||| Sbjct: 94166 gatgggaaaaataccaaactgtcttatcccttggaaaagttcgactctgatgtatctgga 94225 Query: 154 aggagctttcacaatggacgatttatacagaggatgcgtgaaaa 197 || || ||||||||||| || || |||||||| ||||| ||||| Sbjct: 94226 agaagttttcacaatggtcgtttcatacagagaatgcgagaaaa 94269 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 229 caaggaacagttacatctttgcttgaagaaaatgg 263 |||||||| |||||||| || |||||||||||||| Sbjct: 94394 caaggaaccgttacatcgttacttgaagaaaatgg 94428
>gb|DQ366569.1| Medicago sativa squalene epoxidase (SE1) gene, complete cds Length = 5812 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 115 tcttaccccttggagaagttccattcagatgtggctggcaggagctttcacaatggacga 174 ||||| |||||||| ||||| || |||||||| ||||||| ||||||||||| || || Sbjct: 2884 tcttatcccttggaaaagtttcactcagatgtctctggcagaagctttcacaacgggcgt 2943 Query: 175 tttatacagaggatgcg 191 ||||| ||||||||||| Sbjct: 2944 tttattcagaggatgcg 2960
>gb|DQ386734.1| Panax notoginseng squalene epoxidase mRNA, complete cds Length = 1623 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 112 ctttcttaccccttggagaagttccattcagatgtggctggcaggagctttca 164 |||||||||||||||||||| || ||||| ||||| ||||| || |||||||| Sbjct: 471 ctttcttaccccttggagaaatttcattcggatgtagctggaagaagctttca 523 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 505 accgaggttcgctgtttggtagatgtccctggccagaaggtgcc 548 |||||| ||||||||||||| ||| | ||||| || |||||||| Sbjct: 864 accgagattcgctgtttggttgatttgcctggacaaaaggtgcc 907
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 47385 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 47444 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 47445 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 47504 Query: 193 gaaaaagct 201 || |||||| Sbjct: 47505 gagaaagct 47513 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaa 260 |||||||||||||||| ||||| ||| | |||||||| Sbjct: 47627 tggagcaaggaacagtgacatcgttggtggaagaaaa 47663
>emb|AL035709.1|ATT28I19 Arabidopsis thaliana DNA chromosome 4, BAC clone T28I19 (ESSA project) Length = 110766 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 73 cttggttatgcattattcaaagatgggaagaacacaaaactttcttaccccttggagaag 132 ||||||||||| | || ||||||||||| |||| ||||| |||||||| ||||| || Sbjct: 43682 cttggttatgctctctttaaagatgggaaacacactaaactctcttacccgttggatcag 43741 Query: 133 ttccattcagatgtggctggcaggagctttcacaatggacgatttatacagaggatgcgt 192 || |||| ||||| || || | |||||||||||||| ||||| | ||||||||||| Sbjct: 43742 tttgattccgatgttgcgggtcgtagctttcacaatgggagatttgtgcagaggatgcga 43801 Query: 193 gaaaaagct 201 || |||||| Sbjct: 43802 gagaaagct 43810 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 224 tggagcaaggaacagttacatctttgcttgaagaaaa 260 |||||||||||||||| ||||| ||| | |||||||| Sbjct: 43924 tggagcaaggaacagtgacatcgttggtggaagaaaa 43960
>dbj|AB003516.1| Panax ginseng mRNA for squalene epoxidase, complete cds Length = 1845 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 112 ctttcttaccccttggagaagttccattcagatgtggctggcaggagctttca 164 |||||||||||||||||||| || ||||| ||||| ||||| || |||||||| Sbjct: 511 ctttcttaccccttggagaaatttcattcggatgtagctggaagaagctttca 563 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 505 accgaggttcgctgtttggtagatgtccctggccagaaggtgcc 548 |||||| ||||||||||||| ||||| ||||| || |||||||| Sbjct: 904 accgagattcgctgtttggttgatgtgcctggacaaaaggtgcc 947
>gb|AC082643.6|AC082643 Arabidopsis thaliana chromosome 1 BAC F9K23 genomic sequence, complete sequence Length = 48891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 16880 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 16939 Query: 184 aggatgcgtgaaaaagctgc 203 || ||||| || |||||||| Sbjct: 16940 agaatgcgggagaaagctgc 16959
>dbj|AB077822.1| Arabidopsis thaliana genomic DNA, chromosome 1, P1 clone:X7J, complete sequence Length = 77636 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 124 ttggagaagttccattcagatgtggctggcaggagctttcacaatggacgatttatacag 183 ||||||||||| || |||||| |||| |||||||||||||||||||| ||||| || Sbjct: 44444 ttggagaagtttcacgaagatgtatctggaaggagctttcacaatggacgttttattcaa 44385 Query: 184 aggatgcgtgaaaaagctgc 203 || ||||| || |||||||| Sbjct: 44384 agaatgcgggagaaagctgc 44365
>ref|NM_127848.2| Arabidopsis thaliana oxidoreductase AT2G22830 mRNA, complete cds Length = 2017 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 91 aaagatgggaagaacacaaaactttcttaccccttggagaagttccattcagatgtggct 150 |||||||||||| | || |||||| ||||||||||||| | ||| |||| ||||| || Sbjct: 592 aaagatgggaagcatactaaacttgcttaccccttggaaacgtttgattcggatgtagcc 651 Query: 151 ggcaggagctttcacaatggacgatttatacagaggatgcgtgaaaaagc 200 || || || || || ||||| ||||| ||||||| ||||| |||||||| Sbjct: 652 gggagaagtttccataatgggagatttgtacagagaatgcgagaaaaagc 701
>gb|AC004786.3| Arabidopsis thaliana chromosome 2 clone T20K9 map CIC06C07, complete sequence Length = 86686 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 91 aaagatgggaagaacacaaaactttcttaccccttggagaagttccattcagatgtggct 150 |||||||||||| | || |||||| ||||||||||||| | ||| |||| ||||| || Sbjct: 21036 aaagatgggaagcatactaaacttgcttaccccttggaaacgtttgattcggatgtagcc 20977 Query: 151 ggcaggagctttcacaatggacgatttatacagaggatgcgtgaaaaagc 200 || || || || || ||||| ||||| ||||||| ||||| |||||||| Sbjct: 20976 gggagaagtttccataatgggagatttgtacagagaatgcgagaaaaagc 20927
>dbj|AB122078.1| Panax ginseng mRNA for squalene epoxidase, complete cds Length = 2005 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 112 ctttcttaccccttggagaagttccattcagatgtggctggcaggagctttca 164 |||||||||||||||||||| || ||||| ||||| || || || |||||||| Sbjct: 572 ctttcttaccccttggagaaatttcattcggatgtagccggaagaagctttca 624 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 505 accgaggttcgctgtttggtagatgtccctggccagaaggtgcc 548 |||||| ||||||||||||| ||||| ||||| || |||||||| Sbjct: 965 accgagattcgctgtttggttgatgtgcctggacaaaaggtgcc 1008
>gb|AC092586.2| Homo sapiens BAC clone RP11-30H15 from 2, complete sequence Length = 130636 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 caatccttctcccatcctattt 489 |||||||||||||||||||||| Sbjct: 83159 caatccttctcccatcctattt 83138
>gb|AC127680.3| Mus musculus BAC clone RP24-159F1 from chromosome X, complete sequence Length = 199848 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 117346 cattattcaaagatgggaaga 117366
>emb|CR936360.14| Human DNA sequence from clone RP13-440N7 on chromosome X, complete sequence Length = 154563 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 cctttgctctccaaaggttga 389 ||||||||||||||||||||| Sbjct: 43030 cctttgctctccaaaggttga 43010
>gb|AC124386.4| Mus musculus BAC clone RP24-422C24 from chromosome 1, complete sequence Length = 146080 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 caaagatgggaagaacacaaaactt 114 |||||| |||||||||||||||||| Sbjct: 1640 caaagaagggaagaacacaaaactt 1616
>gb|AC127688.7| Mus musculus BAC clone RP24-200F13 from chromosome X, complete sequence Length = 162832 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 15425 cattattcaaagatgggaaga 15445
>gb|DQ457054.1| Panax notoginseng squalene epoxidase mRNA, complete cds Length = 1648 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 112 ctttcttaccccttggagaagttccattcagatgtggctggcaggagctttca 164 |||||||||||||||||| | | ||||| ||||| ||||| || |||||||| Sbjct: 476 ctttcttaccccttggaggaaattcattcggatgtagctggaagaagctttca 528 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 505 accgaggttcgctgtttggtagatgtccctggccagaaggtgcc 548 |||||| ||||||||||||| ||| | ||||| || |||||||| Sbjct: 869 accgagattcgctgtttggttgatttgcctggacaaaaggtgcc 912
>emb|BX908402.3| Human DNA sequence from clone WI2-87136C11 on chromosome X, complete sequence Length = 36556 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 cctttgctctccaaaggttga 389 ||||||||||||||||||||| Sbjct: 15997 cctttgctctccaaaggttga 15977
>emb|BX649635.3| Human DNA sequence from clone WI2-82904A1 on chromosome X, complete sequence Length = 43709 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 cctttgctctccaaaggttga 389 ||||||||||||||||||||| Sbjct: 5369 cctttgctctccaaaggttga 5349
>gb|AC162904.4| Mus musculus BAC clone RP24-152H15 from chromosome 1, complete sequence Length = 147442 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 caaagatgggaagaacacaaaactt 114 |||||| |||||||||||||||||| Sbjct: 97119 caaagaagggaagaacacaaaactt 97095
>emb|BX649235.2| Mouse DNA sequence from clone RP24-85D2 on chromosome X, complete sequence Length = 133621 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 70210 cattattcaaagatgggaaga 70230
>emb|CR381683.9| Mouse DNA sequence from clone RP24-559I10 on chromosome X, complete sequence Length = 150276 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 86173 cattattcaaagatgggaaga 86193
>emb|BX088531.8| Mouse DNA sequence from clone RP23-106J7 on chromosome X, complete sequence Length = 208905 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 47284 cattattcaaagatgggaaga 47304
>emb|BX571804.4| Mouse DNA sequence from clone RP23-133K13 on chromosome X, complete sequence Length = 101631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 80654 cattattcaaagatgggaaga 80674
>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence Length = 182507 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tgatgaaattgatgcacagcg 68 ||||||||||||||||||||| Sbjct: 91869 tgatgaaattgatgcacagcg 91889
>gb|AF248484.1|AF248484 Homo sapiens chromosome 21 PAC 30P13 map 21q11.2, complete sequence, containing gene for nuclear factor RIP140 Length = 148131 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggactgtgttgatgaaattga 59 ||||||||||||||||||||| Sbjct: 86574 ggactgtgttgatgaaattga 86594
>emb|BX005468.9| Mouse DNA sequence from clone RP23-142E21 on chromosome X, complete sequence Length = 217179 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 68066 cattattcaaagatgggaaga 68086
>dbj|BS000013.1| Pan troglodytes chromosome 22 clone:RP43-009O02, map 22, complete sequences Length = 180661 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggactgtgttgatgaaattga 59 ||||||||||||||||||||| Sbjct: 53869 ggactgtgttgatgaaattga 53889
>emb|BX119993.9| Mouse DNA sequence from clone RP23-13I18 on chromosome X, complete sequence Length = 234697 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cattattcaaagatgggaaga 103 ||||||||||||||||||||| Sbjct: 161827 cattattcaaagatgggaaga 161807
>gb|AF127577.2|AF127577 Homo sapiens clone PAC 270M7 chromosome 21 map 21q11.2, complete sequence Length = 168153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggactgtgttgatgaaattga 59 ||||||||||||||||||||| Sbjct: 9666 ggactgtgttgatgaaattga 9686
>emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007 Length = 340000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggactgtgttgatgaaattga 59 ||||||||||||||||||||| Sbjct: 268585 ggactgtgttgatgaaattga 268605
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ctgtttggtagatgtccctg 535 |||||||||||||||||||| Sbjct: 103221 ctgtttggtagatgtccctg 103202
>ref|NM_174901.3| Homo sapiens family with sequence similarity 9, member C (FAM9C), mRNA Length = 3502 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctttgcttgaagaaaatggt 264 |||||||||||||||||||| Sbjct: 2621 ctttgcttgaagaaaatggt 2602
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 ttgatgaaattgatgcacagcgtg 70 ||||||||||||||||| |||||| Sbjct: 1132959 ttgatgaaattgatgcagagcgtg 1132982
>gb|AC116460.10| Mus musculus chromosome 10, clone RP23-244G12, complete sequence Length = 203330 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gcaatacaagatcaagtcag 298 |||||||||||||||||||| Sbjct: 35931 gcaatacaagatcaagtcag 35912
>ref|XM_501576.1| Yarrowia lipolytica CLIB122, YALI0C07909g predicted mRNA Length = 2730 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 cttggccaatccttctccca 481 |||||||||||||||||||| Sbjct: 2334 cttggccaatccttctccca 2315
>emb|AL390119.25| Human DNA sequence from clone RP11-403P14 on chromosome 1 Contains the 3' end of the PBX1 gene for pre-B-cell leukemia transcription factor 1 and a ribosomal protein L35a (RPL35A) pseudogene, complete sequence Length = 197482 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gtggctggcaggagctttca 164 |||||||||||||||||||| Sbjct: 156880 gtggctggcaggagctttca 156899
>emb|AL365276.9| Human DNA sequence from clone RP11-274C15 on chromosome 6, complete sequence Length = 158737 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 catcattgcccaatgtccaa 222 |||||||||||||||||||| Sbjct: 104876 catcattgcccaatgtccaa 104857
>emb|BX648919.1|HSM809070 Homo sapiens mRNA; cDNA DKFZp686B0429 (from clone DKFZp686B0429) Length = 5881 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctttgcttgaagaaaatggt 264 |||||||||||||||||||| Sbjct: 5024 ctttgcttgaagaaaatggt 5005
>emb|BX648111.1|HSM808258 Homo sapiens mRNA; cDNA DKFZp686G2432 (from clone DKFZp686G2432) Length = 5875 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctttgcttgaagaaaatggt 264 |||||||||||||||||||| Sbjct: 5023 ctttgcttgaagaaaatggt 5004
>emb|BX647580.1|HSM807726 Homo sapiens mRNA; cDNA DKFZp313N1430 (from clone DKFZp313N1430) Length = 3502 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctttgcttgaagaaaatggt 264 |||||||||||||||||||| Sbjct: 2621 ctttgcttgaagaaaatggt 2602
>emb|AL606488.15| Mouse DNA sequence from clone RP23-90E8 on chromosome 13 Contains part of a novel gene, complete sequence Length = 188423 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 tggccaatccttctcccatc 483 |||||||||||||||||||| Sbjct: 101997 tggccaatccttctcccatc 101978
>gb|AF480912.1| Legionella pneumophila clone pA37F putative lipoprotein (plpA), putative copper efflux ATPase (copA2), chemiosmotic efflux system C protein A (cecA), chemiosmotic efflux system C protein B (cecB), chemiosmotic efflux system C protein C (cecC), putative copper efflux ATPase (copA1), chemiosmotic efflux system B protein A (cebA), chemiosmotic efflux system B protein B (cebB), chemiosmotic efflux system B protein C (cebC), putative cation efflux transporter (ctpA), putative cadmium efflux ATPase (cadA1), and cadA2 genes, complete cds; and unknown genes Length = 38800 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ttgatgaaattgatgcacagcgtg 70 ||||||||||||||||| |||||| Sbjct: 6295 ttgatgaaattgatgcagagcgtg 6272
>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence Length = 111010 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gttatgcattattcaaagat 96 |||||||||||||||||||| Sbjct: 65826 gttatgcattattcaaagat 65807
>gb|AC146758.11| Medicago truncatula clone mth2-64b11, complete sequence Length = 111089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tgaaattgatggaattgggt 33 |||||||||||||||||||| Sbjct: 78505 tgaaattgatggaattgggt 78486
>gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K3 complete sequence Length = 166757 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctttgcttgaagaaaatggt 264 |||||||||||||||||||| Sbjct: 94443 ctttgcttgaagaaaatggt 94424
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC Library) complete sequence Length = 148984 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tgatgaaattgatgcacagc 67 |||||||||||||||||||| Sbjct: 23913 tgatgaaattgatgcacagc 23932
>gb|AC008676.6| Homo sapiens chromosome 5 clone CTB-47B11, complete sequence Length = 208065 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 caggtgaagaactaaaagct 315 |||||||||||||||||||| Sbjct: 202495 caggtgaagaactaaaagct 202476
>gb|AC158501.3| Medicago truncatula chromosome 2 BAC clone mth2-70b22, complete sequence Length = 108930 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aggtgaagaactaaaagctt 316 |||||||||||||||||||| Sbjct: 75832 aggtgaagaactaaaagctt 75813
>gb|AC016571.7| Homo sapiens chromosome 5 clone CTB-109A12, complete sequence Length = 73304 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 caggtgaagaactaaaagct 315 |||||||||||||||||||| Sbjct: 51481 caggtgaagaactaaaagct 51500
>dbj|AB168433.1| Macaca fascicularis testis cDNA clone: QtsA-12125, similar to human RIKEN cDNA 4930578I06 (LOC203076), mRNA, RefSeq: XM_114621.4 Length = 2367 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ctggccagaaggtgccctcc 552 |||||||||||||||||||| Sbjct: 889 ctggccagaaggtgccctcc 870
>gb|AC093859.3| Homo sapiens BAC clone RP11-538A7 from 2, complete sequence Length = 107842 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 catctttgcttgaagaaaat 261 |||||||||||||||||||| Sbjct: 69853 catctttgcttgaagaaaat 69872
>gb|AC139705.4| Homo sapiens X BAC RP11-102M2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148316 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ctttgcttgaagaaaatggt 264 |||||||||||||||||||| Sbjct: 115354 ctttgcttgaagaaaatggt 115373
>gb|AC153531.5| Mus musculus 10 BAC RP23-22C3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186219 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gcaatacaagatcaagtcag 298 |||||||||||||||||||| Sbjct: 114246 gcaatacaagatcaagtcag 114227
>gb|AC007074.2|AC007074 Homo sapiens PAC clone RP3-368G6 from X, complete sequence Length = 57876 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 ttatgcaccattgacaattgtgtg 338 ||||||||||||||| |||||||| Sbjct: 27310 ttatgcaccattgactattgtgtg 27287
>dbj|AP006201.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-79K22, complete sequence Length = 172172 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 catcattgcccaatgtccaa 222 |||||||||||||||||||| Sbjct: 73121 catcattgcccaatgtccaa 73102
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete sequence Length = 239958 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 agggcttgtcttggagaatt 427 |||||||||||||||||||| Sbjct: 103336 agggcttgtcttggagaatt 103355
>gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, complete sequence Length = 159472 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 agggcttgtcttggagaatt 427 |||||||||||||||||||| Sbjct: 78051 agggcttgtcttggagaatt 78070
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 cttggccaatccttctccca 481 |||||||||||||||||||| Sbjct: 1047838 cttggccaatccttctccca 1047819
>dbj|AP002528.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 1/4 Length = 300000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 catcattgcccaatgtccaa 222 |||||||||||||||||||| Sbjct: 26011 catcattgcccaatgtccaa 25992
>dbj|AB042234.1| Homo sapiens genomic DNA, chromosome 6q21, clone:353I20, complete sequence Length = 143320 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 catcattgcccaatgtccaa 222 |||||||||||||||||||| Sbjct: 26011 catcattgcccaatgtccaa 25992
>emb|AL645687.13| Mouse DNA sequence from clone RP23-478H15 on chromosome 11, complete sequence Length = 156174 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aatacaagatcaagtcaggt 300 |||||||||||||||||||| Sbjct: 29603 aatacaagatcaagtcaggt 29622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,176,671 Number of Sequences: 3902068 Number of extensions: 5176671 Number of successful extensions: 96755 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96436 Number of HSP's gapped (non-prelim): 302 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
