| Clone Name | bags38g02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds Length = 787 Score = 406 bits (205), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||| ||||||||| |||||||||||| |||||| || || |||||||||||| |||| Sbjct: 179 catctacgcccgcgcggagcagtacgccggggagtatgaggcccaggacaaggagctggt 238 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 239 gcaacttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagcc 298 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||||||||| ||||| ||| | ||||||||||| |||||||||||||||||||||||| | Sbjct: 299 gctgtttgtcgtccgtatccgtggtatcaatgcaatgcacccaaagaccaagaagatctt 358 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 ||||||||||||||||| ||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 359 gcagcttttgcgtttgaggcagatttttaatggtgtgttccttaaggtcaacaaggccac 418 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| || |||| |||||||||||| | || |||||||| ||||| ||||| Sbjct: 419 cattaacatgctgcgtcgggttgagccatatgttacctacgggtaccctaacctcaagag 478 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| |||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 479 tgtcagggagctgatctacaagagaggttacggaaagctcaacaagcaaaggatccctct 538 Query: 361 gaccaacaacaa 372 | |||||||||| Sbjct: 539 ggccaacaacaa 550
>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence Length = 1226 Score = 402 bits (203), Expect = e-109 Identities = 328/370 (88%) Strand = Plus / Minus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 1056 catcttcacccgcgccaagcagtacgccgaggagtacgatgcccaggagaaggaactggt 997 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| | Sbjct: 996 gcagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagct 937 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||| ||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | Sbjct: 936 gctctttgtggtccgcatccgtggtatcaatgccatgcaccctaagaccaggaagatctt 877 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 |||||| |||| ||||| ||||| |||||||| ||||||||||| || |||||||| || Sbjct: 876 gcagcttctgcgattgaggcagatcttcaatggcgtgttcctcaaagtcaacaaggctac 817 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 || |||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||| Sbjct: 816 tattaacatgctacgcagggttgagccatatgttgcatatgggtacccaaacttgaagag 757 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| ||||||||||| |||||||| || ||||||||||| |||||||| ||||| ||||| Sbjct: 756 tgtcagggagttgatctacaagaggggctatggaaagctgaacaagcagaggatccctct 697 Query: 361 gaccaacaac 370 | |||||||| Sbjct: 696 gtccaacaac 687
>ref|XM_480842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1084 Score = 398 bits (201), Expect = e-108 Identities = 320/360 (88%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 |||||||||||||||||||||||||||| |||||||||| || ||||| |||||| | || Sbjct: 193 catcttcgcccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgt 252 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 ||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || | Sbjct: 253 gcagctcaagcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaact 312 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 |||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | Sbjct: 313 tctgtttgtggtccgcatccgtggtatcaatgccatgcaccccaagaccaggaagatctt 372 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 |||||| |||| ||||| ||||| |||||||| || |||||||||||||||||||| || Sbjct: 373 gcagcttctgcggttgaggcagatcttcaatggtgtcttcctcaaggttaacaaggcaac 432 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 433 cattaacatgctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaagag 492 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| ||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 493 tgtcagggaattgatctacaagaggggttacggaaagctcaacaagcagaggattcctct 552
>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full insert sequence Length = 1084 Score = 391 bits (197), Expect = e-105 Identities = 319/360 (88%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 |||||||||||||||||||||||||||| |||||||||| || ||||| |||||| | || Sbjct: 193 catcttcgcccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgt 252 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 ||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || | Sbjct: 253 gcagctcaagcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaact 312 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 |||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | Sbjct: 313 tctgtttgtggtccgcatccgtggtatcaatgccatgcaccccaagaccaggaagatctt 372 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 |||||| |||| ||||| ||||| |||||||| || |||||||||||||||||||| || Sbjct: 373 gcagcttctgcggttgaggcagatcttcaatggtgtcttcctcaaggttaacaaggcaac 432 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 433 cattaacatgctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaaaag 492 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| ||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 493 tgtcagggaattgatctacaagaggggttacggaaagctcaacaagcagaggattcctct 552
>ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 375 bits (189), Expect = e-101 Identities = 326/372 (87%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||| ||||||||||||||||||||||||||||||| || ||||| |||||| |||| Sbjct: 135 catcttctcccgcgccaagcagtacgccgaggagtacgaggcccaggagaaggagctggt 194 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 || |||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 195 gcaacttaagcgtgaggctcggatgaagggtggtttctatgtcagccctgaggaaaagtt 254 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||| | Sbjct: 255 gctgtttgtggtccgtatccgtggtatcaatgccatgcacccgaagaccaggaagatttt 314 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 ||||| ||||||||||| ||||| || |||||||||||| | ||||| ||||| ||||| Sbjct: 315 gcagctcttgcgtttgaggcagatctttaatggagtgttcttgaaggtcaacaaagccac 374 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 375 cattaacatgctgcgcagggttgagccatatgttgcatatgggtacccaaatttgaagag 434 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| | || ||||| |||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 435 tgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaatccctct 494 Query: 361 gaccaacaacaa 372 || |||||||| Sbjct: 495 tacaaacaacaa 506
>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full insert sequence Length = 1040 Score = 375 bits (189), Expect = e-101 Identities = 326/372 (87%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||| ||||||||||||||||||||||||||||||| || ||||| |||||| |||| Sbjct: 250 catcttctcccgcgccaagcagtacgccgaggagtacgaggcccaggagaaggagctggt 309 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 || |||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 310 gcaacttaagcgtgaggctcggatgaagggtggtttctatgtcagccctgaggaaaagtt 369 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||| | Sbjct: 370 gctgtttgtggtccgtatccgtggtatcaatgccatgcacccgaagaccaggaagatttt 429 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 ||||| ||||||||||| ||||| || |||||||||||| | ||||| ||||| ||||| Sbjct: 430 gcagctcttgcgtttgaggcagatctttaatggagtgttcttgaaggtcaacaaagccac 489 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 490 cattaacatgctgcgcagggttgagccatatgttgcatatgggtacccaaatttgaagag 549 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| | || ||||| |||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 550 tgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaatccctct 609 Query: 361 gaccaacaacaa 372 || |||||||| Sbjct: 610 tacaaacaacaa 621
>gb|AY104655.1| Zea mays PCO101521 mRNA sequence Length = 1155 Score = 371 bits (187), Expect = 1e-99 Identities = 324/370 (87%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 195 catcttcacccgcgccaagcagtacgccgaggagtacgatgcccaggagaaggaactggt 254 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| | Sbjct: 255 acagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagct 314 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||| ||||| |||| ||| | ||||||||||||||||| || ||||||| |||||| | Sbjct: 315 gctatttgtgatccgcatccgtggtatcaatgccatgcatcctaagaccaggaagatatt 374 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 |||||| |||||||||| |||||||||||||| |||||||| || || |||||||| || Sbjct: 375 gcagcttctgcgtttgaggcagatattcaatggcgtgttcctgaaagtcaacaaggctac 434 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 435 cattaacatgcttcgcagggttgagccttatgttgcatatgggtacccgaacttgaagag 494 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| ||||||||||| |||||||| || || ||||| || |||||||| ||||| ||||| Sbjct: 495 tgtcagggagttgatctacaagaggggctacggaaaactgaacaagcagaggatccctct 554 Query: 361 gaccaacaac 370 | | |||||| Sbjct: 555 gtctaacaac 564
>gb|BT016468.1| Zea mays clone Contig301 mRNA sequence Length = 1198 Score = 363 bits (183), Expect = 3e-97 Identities = 323/370 (87%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 182 catcttcacccgcgccaagcagtacgccgaggagtacgatgcccaggagaaggaactggt 241 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 |||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| | Sbjct: 242 acagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagccctgaggcaaagct 301 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||| ||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||| | Sbjct: 302 gctatttgtggtccgcatccgtggtatcaatgccatgcaccctaagaccaggaagatatt 361 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 |||||| |||||||||| ||||| ||||||||||||||||| || || ||||| || || Sbjct: 362 gcagcttctgcgtttgaggcagatcttcaatggagtgttcctgaaagtcaacaaagcaac 421 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| || || |||||||||||||||||||||||| ||||||| Sbjct: 422 cattaacatgcttcgcagggttgaaccttatgttgcatatgggtacccgaacttgaagag 481 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| ||||||||||| |||||||| || || ||||| || |||||||| ||||| ||||| Sbjct: 482 tgtcagggagttgatctacaagaggggctacggaaaactgaacaagcagaggatccctct 541 Query: 361 gaccaacaac 370 | | |||||| Sbjct: 542 gtctaacaac 551
>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence Length = 922 Score = 363 bits (183), Expect = 3e-97 Identities = 323/370 (87%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||| ||||||| ||||||||||||||||| |||||||| ||||| ||||| |||| Sbjct: 130 catcttcacccgcgcaaagcagtacgccgaggaatacgatgcccaggagaaggaactggt 189 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 ||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| | Sbjct: 190 gcagcttaagcgcgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagct 249 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 ||| ||||| ||||| ||| | ||||| || ||||||||||| ||||||| ||||||| | Sbjct: 250 gctctttgtggtccgcatccggggtattaacgccatgcaccctaagaccaggaagatctt 309 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 |||||| |||| ||||| ||||| |||||||| ||||||||||| || |||||||| || Sbjct: 310 gcagcttctgcgattgaggcagatcttcaatggtgtgttcctcaaagtcaacaaggcgac 369 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 || |||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||| Sbjct: 370 tattaacatgctacgcagggttgagccatatgttgcatatgggtacccaaacttgaagag 429 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 ||| ||||||||||| |||||||| || ||||||||||| |||||||| ||||| ||||| Sbjct: 430 tgtcagggagttgatctacaagaggggctatggaaagctgaacaagcagaggatccctct 489 Query: 361 gaccaacaac 370 | |||||||| Sbjct: 490 gtccaacaac 499
>gb|AY103677.1| Zea mays PCO099976 mRNA sequence Length = 1103 Score = 317 bits (160), Expect = 1e-83 Identities = 318/371 (85%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggt 60 ||||||||||||||||||||||||||||||||||||| | || ||||| |||||| | || Sbjct: 248 catcttcgcccgcgccaagcagtacgccgaggagtaccacgcccaggagaaggagcttgt 307 Query: 61 tcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagtt 120 ||||| ||||||||||||||| ||||||||||||||||||| || || ||||| ||| | Sbjct: 308 gcagctcaagcgtgaggcccggttgaagggtgggttctatgtgagcccagaggccaagct 367 Query: 121 gctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcct 180 |||||||| || || ||| | |||||||||||||||||||| |||||| |||||| | Sbjct: 368 tctgtttgtggttcgcatccgtggtatcaatgccatgcaccccaagacccgcaagatctt 427 Query: 181 ccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccac 240 ||||| |||| ||||| ||||| ||||| || || |||||||||||||||||||| || Sbjct: 428 gcagctcctgcgattgaggcagatcttcaacggtgtcttcctcaaggttaacaaggcaac 487 Query: 241 catcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagag 300 ||| |||||||| |||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 488 cattaacatgctgcgcagggtggagccatatgttgcgtacggataccccaacctgaagag 547 Query: 301 tgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 || |||||||| || |||||||||||||| || ||||| |||||||| |||||||| || Sbjct: 548 cgttagggagttaatctacaagagaggttacgggaagctgaacaagcagaggattccact 607 Query: 361 gaccaacaaca 371 | |||||||| Sbjct: 608 tagcaacaaca 618
>dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A02, full insert sequence Length = 594 Score = 155 bits (78), Expect = 1e-34 Identities = 104/113 (92%) Strand = Plus / Plus Query: 248 atgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgagg 307 ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1 atgctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaagagtgtcagg 60 Query: 308 gagttgatntacaagagaggttatggaaagctcaacaagcaaaggattcctct 360 || ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 61 gaattgatctacaagaggggttacggaaagctcaacaagcagaggattcctct 113
>ref|NM_126186.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G01250 mRNA, complete cds Length = 1051 Score = 131 bits (66), Expect = 2e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 347 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 406 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 407 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 466 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| |||||||||| | ||| ||||| |||||| Sbjct: 467 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 526 Query: 323 agaggttatggaaagct 339 |||||||| |||||||| Sbjct: 527 agaggttacggaaagct 543
>gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 751 Score = 131 bits (66), Expect = 2e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 271 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 330 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 331 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 390 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| |||||||||| | ||| ||||| |||||| Sbjct: 391 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 450 Query: 323 agaggttatggaaagct 339 |||||||| |||||||| Sbjct: 451 agaggttacggaaagct 467
>gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250; F10A8.13) mRNA, complete cds Length = 915 Score = 131 bits (66), Expect = 2e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 318 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 377 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 378 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 437 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| |||||||||| | ||| ||||| |||||| Sbjct: 438 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 497 Query: 323 agaggttatggaaagct 339 |||||||| |||||||| Sbjct: 498 agaggttacggaaagct 514
>gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete sequence Length = 996 Score = 131 bits (66), Expect = 2e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 347 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 406 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 407 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 466 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| |||||||||| | ||| ||||| |||||| Sbjct: 467 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 526 Query: 323 agaggttatggaaagct 339 |||||||| |||||||| Sbjct: 527 agaggttacggaaagct 543
>ref|NM_202576.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.3 mRNA, complete cds Length = 1569 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 915 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 974 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 975 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 1034 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 1035 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 1094 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 1095 cgaggttttggaaagct 1111
>ref|NM_202575.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.2 mRNA, complete cds Length = 1225 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 571 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 630 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 631 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 690 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 691 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 750 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 751 cgaggttttggaaagct 767
>ref|NM_112204.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.1 mRNA, complete cds Length = 995 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 760 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 271 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgaggcag 330 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 331 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 390 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| |||||||||| | ||| ||||| |||||| Sbjct: 391 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 450 Query: 323 agaggttatggaaagct 339 |||||||| |||||||| Sbjct: 451 agaggttacggaaagct 467
>gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 960 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 320 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgaggcag 379 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 380 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 439 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| |||||||||| | ||| ||||| |||||| Sbjct: 440 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 499 Query: 323 agaggttatggaaagct 339 |||||||| |||||||| Sbjct: 500 agaggttacggaaagct 516
>gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 735 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 277 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 336 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 337 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 396 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 397 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 456 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 457 cgaggttttggaaagct 473
>gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 971 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 966 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 943 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 323 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 382 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 383 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 442 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 443 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 502 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 503 cgaggttttggaaagct 519
>emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 123 bits (62), Expect = 4e-25 Identities = 163/197 (82%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 567 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 626 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 627 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 686 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 687 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 746 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 747 cgaggttttggaaagct 763
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 199 acagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcag 258 |||||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 8148188 acagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacatgctgcgcag 8148247 Query: 259 ggtcgagccatatgttgcatatgggta 285 ||| ||||||||||||||||||||||| Sbjct: 8148248 ggttgagccatatgttgcatatgggta 8148274 Score = 103 bits (52), Expect = 4e-19 Identities = 72/79 (91%) Strand = Plus / Plus Query: 282 ggtacccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagctca 341 ||||||| |||||||||||||| ||||| ||||| |||||||| ||||| |||||||||| Sbjct: 8148769 ggtacccaaacctgaagagtgtcagggaattgatctacaagaggggttacggaaagctca 8148828 Query: 342 acaagcaaaggattcctct 360 ||||||| ||||||||||| Sbjct: 8148829 acaagcagaggattcctct 8148847 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 44 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 103 ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 8147868 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 8147927 Query: 104 agtcctgaggctaagttgctgtttgttgtccg 135 || |||||||| || | |||||||| ||||| Sbjct: 8147928 agccctgaggccaaacttctgtttgtggtccg 8147959 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacga 39 |||||||||||||||||||||||||||| |||||||||| Sbjct: 8147314 catcttcgcccgcgccaagcagtacgcccaggagtacga 8147352 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 198 ||||||||||||||||||| ||||||| ||||||| | |||||| |||| ||||| Sbjct: 8148044 gtatcaatgccatgcaccccaagaccaggaagatcttgcagcttctgcggttgag 8148098
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 199 acagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcag 258 |||||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 116499 acagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacatgctgcgcag 116558 Query: 259 ggtcgagccatatgttgcatatgggta 285 ||| ||||||||||||||||||||||| Sbjct: 116559 ggttgagccatatgttgcatatgggta 116585 Score = 103 bits (52), Expect = 4e-19 Identities = 72/79 (91%) Strand = Plus / Plus Query: 282 ggtacccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagctca 341 ||||||| |||||||||||||| ||||| ||||| |||||||| ||||| |||||||||| Sbjct: 117080 ggtacccaaacctgaagagtgtcagggaattgatctacaagaggggttacggaaagctca 117139 Query: 342 acaagcaaaggattcctct 360 ||||||| ||||||||||| Sbjct: 117140 acaagcagaggattcctct 117158 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 44 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 103 ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 116179 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 116238 Query: 104 agtcctgaggctaagttgctgtttgttgtccg 135 || |||||||| || | |||||||| ||||| Sbjct: 116239 agccctgaggccaaacttctgtttgtggtccg 116270 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacga 39 |||||||||||||||||||||||||||| |||||||||| Sbjct: 115625 catcttcgcccgcgccaagcagtacgcccaggagtacga 115663 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 198 ||||||||||||||||||| ||||||| ||||||| | |||||| |||| ||||| Sbjct: 116355 gtatcaatgccatgcaccccaagaccaggaagatcttgcagcttctgcggttgag 116409
>ref|NM_180079.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.1 mRNA, complete cds Length = 981 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 314 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 373 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 374 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 433 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 434 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 493 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 494 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 546
>ref|NM_180080.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.2 mRNA, complete cds Length = 1220 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 541 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 600 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 601 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 660 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 661 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 720 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 721 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 773
>gb|AY081474.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 782 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 235 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 294 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 295 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 354 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 355 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 414 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 415 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 467
>gb|AY065196.1| Arabidopsis thaliana 60S ribosomal protein L7 (F6E13.25; At2g44120) mRNA, complete cds Length = 888 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 277 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 336 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 337 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 396 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 397 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 456 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 457 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 509
>gb|AF446884.1|AF446884 Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 729 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 235 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 294 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 295 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 354 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 355 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 414 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 415 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 467
>gb|AY052724.1| Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 905 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 277 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 336 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 337 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 396 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 397 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 456 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 457 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 509
>gb|AY087583.1| Arabidopsis thaliana clone 36813 mRNA, complete sequence Length = 1221 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 541 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 600 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 601 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 660 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 661 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 720 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 721 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 773
>gb|BT002379.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 955 Score = 115 bits (58), Expect = 1e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 107 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 166 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 310 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 369 Query: 167 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 226 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 370 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 429 Query: 227 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 286 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 430 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 489 Query: 287 ccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 || ||| ||||||| || | ||| |||| ||||| ||||||||||||||||| Sbjct: 490 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 542
>emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 889 Score = 107 bits (54), Expect = 3e-20 Identities = 161/197 (81%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 306 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 365 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 366 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 425 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| ||||| | || || | ||| ||| | |||||| | | ||| ||||| |||||| Sbjct: 426 gagccctatgtcacttacggattccctaacttaaagagtatcaaggaattgatctacaag 485 Query: 323 agaggttatggaaagct 339 |||||||| | |||||| Sbjct: 486 agaggttacgtaaagct 502
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 44 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 103 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 110622 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 110681 Query: 104 agtcctgaggctaagttgctgtttgttgtccg 135 || ||||||| |||||||||||||| ||||| Sbjct: 110682 agccctgaggaaaagttgctgtttgtggtccg 110713 Score = 99.6 bits (50), Expect = 6e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 200 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 259 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 110964 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 111023 Query: 260 gtcgagccatatgttgcatatgggta 285 || ||||||||||||||||||||||| Sbjct: 111024 gttgagccatatgttgcatatgggta 111049 Score = 71.9 bits (36), Expect = 1e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 294 tgaagagtgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaagga 353 |||||||||| | || ||||| |||||||| || ||||||||||||||||||||||| | Sbjct: 111405 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 111464 Query: 354 ttcctctgaccaacaacaa 372 | ||||| || |||||||| Sbjct: 111465 tccctcttacaaacaacaa 111483 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacga 39 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 109983 catcttctcccgcgccaagcagtacgccgaggagtacga 110021 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 198 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 110820 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 110874
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 44 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 103 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 38645 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 38704 Query: 104 agtcctgaggctaagttgctgtttgttgtccg 135 || ||||||| |||||||||||||| ||||| Sbjct: 38705 agccctgaggaaaagttgctgtttgtggtccg 38736 Score = 99.6 bits (50), Expect = 6e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 200 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 259 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 38987 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 39046 Query: 260 gtcgagccatatgttgcatatgggta 285 || ||||||||||||||||||||||| Sbjct: 39047 gttgagccatatgttgcatatgggta 39072 Score = 71.9 bits (36), Expect = 1e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 294 tgaagagtgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaagga 353 |||||||||| | || ||||| |||||||| || ||||||||||||||||||||||| | Sbjct: 39428 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 39487 Query: 354 ttcctctgaccaacaacaa 372 | ||||| || |||||||| Sbjct: 39488 tccctcttacaaacaacaa 39506 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacga 39 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 38006 catcttctcccgcgccaagcagtacgccgaggagtacga 38044 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 198 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 38843 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 38897
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 44 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 103 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 30634914 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 30634973 Query: 104 agtcctgaggctaagttgctgtttgttgtccg 135 || ||||||| |||||||||||||| ||||| Sbjct: 30634974 agccctgaggaaaagttgctgtttgtggtccg 30635005 Score = 99.6 bits (50), Expect = 6e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 200 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 259 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 30635256 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 30635315 Query: 260 gtcgagccatatgttgcatatgggta 285 || ||||||||||||||||||||||| Sbjct: 30635316 gttgagccatatgttgcatatgggta 30635341 Score = 71.9 bits (36), Expect = 1e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 294 tgaagagtgtgagggagttgatntacaagagaggttatggaaagctcaacaagcaaagga 353 |||||||||| | || ||||| |||||||| || ||||||||||||||||||||||| | Sbjct: 30635697 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 30635756 Query: 354 ttcctctgaccaacaacaa 372 | ||||| || |||||||| Sbjct: 30635757 tccctcttacaaacaacaa 30635775 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 catcttcgcccgcgccaagcagtacgccgaggagtacga 39 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 30634275 catcttctcccgcgccaagcagtacgccgaggagtacga 30634313 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 198 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 30635112 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 30635166
>emb|BX824872.1|CNS0A5RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1504 Score = 99.6 bits (50), Expect = 6e-18 Identities = 161/197 (81%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 ||||| |||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 916 ggtataaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 975 Query: 203 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 262 || |||||||| |||||| | ||||| |||||||| ||||| |||||| | ||| | || Sbjct: 976 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatg-ttcgccgtgtt 1034 Query: 263 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatntacaag 322 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 1035 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 1094 Query: 323 agaggttatggaaagct 339 |||||| ||||||||| Sbjct: 1095 cgaggttttggaaagct 1111
>emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 93.7 bits (47), Expect = 4e-16 Identities = 96/111 (86%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||||||| |||||||||| |||||||| | || |||||||||||||||||| Sbjct: 311 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttgagacag 370 Query: 203 atattc-aatggagtgttcctcaaggttaacaaggccaccatcaacatgct 252 || ||| ||||| |||||| | ||||| |||||||| ||||| |||||||| Sbjct: 371 attttcaaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgct 421
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 ||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 43427 gtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 43369 Score = 54.0 bits (27), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 294 tgaagagtgtgagggagttgatntacaagagaggttatggaaagct 339 |||||||||| | ||| ||||| |||||||||||||| |||||||| Sbjct: 42945 tgaagagtgtcaaggaattgatctacaagagaggttacggaaagct 42900
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07, complete sequence Length = 109741 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 ||||||||||||| ||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 80212 gtatcaatgccattgacccaaaaaccaagaagattctgcagctcctgcgtttgagacag 80154 Score = 42.1 bits (21), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 312 tgatntacaagagaggttatggaaagct 339 |||| ||||| ||||||||||||||||| Sbjct: 79783 tgatctacaaaagaggttatggaaagct 79756
>gb|DQ228335.1| Solanum tuberosum clone 145F05 thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 915 Score = 60.0 bits (30), Expect = 5e-06 Identities = 137/173 (79%) Strand = Plus / Plus Query: 165 agaccaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctca 224 ||||||| ||||| || |||||| | | ||| ||||||| ||||| || || ||| | | Sbjct: 339 agaccaaaaagattctgcagcttctcagattgcgacagatcttcaacggcgtcttcttga 398 Query: 225 aggttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggt 284 | ||||||||||||||| | |||||||| | ||||| |||||||||||| |||| || | Sbjct: 399 aagttaacaaggccaccgtgaacatgctgcatagggttgagccatatgttacatacggct 458 Query: 285 acccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaag 337 | || ||| |||||||| | | || |||| ||||| |||||||||||||| Sbjct: 459 atcccaacttgaagagtattaaagaactgatctacaaacgaggttatggaaag 511
>gb|DQ108546.1| Corchorus olitorius SSR marker J148-M13F genomic sequence Length = 861 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 293 ctgaagagtgtgagggagttgatntacaagagaggttatggaaagctcaacaagca 348 |||||||||||||| ||| |||| ||||||||||| ||||| ||| | |||||||| Sbjct: 463 ctgaagagtgtgagagagctgatctacaagagaggatatgggaagttaaacaagca 408
>gb|AY232023.1| Drosophila yakuba clone yak-ad_RpL7 mRNA sequence Length = 560 Score = 56.0 bits (28), Expect = 8e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 182 cagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccacc 241 |||||||| ||| |||| ||||| ||| || |||||| ||||| | |||||||||||| Sbjct: 337 cagcttttccgtctgaggcagatcaacaacggtgtgttcatcaagctgaacaaggccacc 396 Query: 242 atcaacatgctccgca 257 ||||||||||| |||| Sbjct: 397 atcaacatgcttcgca 412
>ref|NM_078807.1| Drosophila melanogaster Ribosomal protein L7 CG4897-RA (RpL7), mRNA Length = 982 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 215 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 257 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 418 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 460
>gb|AY089648.1| Drosophila melanogaster RH04903 full insert cDNA Length = 909 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 215 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 257 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 417 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 459
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 215 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 257 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 20419 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 20377
>gb|AC009849.7|AC009849 Drosophila melanogaster, chromosome 2L, region 31B-31C, BAC clone BACR07H08, complete sequence Length = 153505 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 215 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 257 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 29566 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 29608
>dbj|AP002038.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K20M4 Length = 25790 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 ||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 4913 gtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 4971
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 215 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 257 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 227949 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 227991
>emb|X15109.1|DMRPHOM D.melanogaster mRNA fragment for ribosomal protein homologous to rat ribosomal protein L7 Length = 810 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 215 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 257 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 332 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 374
>ref|XM_453218.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D03410g predicted mRNA Length = 768 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 317 tacaagagaggttatggaaagctcaacaagcaaaggattcct 358 |||||||||||||| || ||| ||||||||||||| |||||| Sbjct: 478 tacaagagaggttacggtaagatcaacaagcaaagaattcct 519
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 317 tacaagagaggttatggaaagctcaacaagcaaaggattcct 358 |||||||||||||| || ||| ||||||||||||| |||||| Sbjct: 286055 tacaagagaggttacggtaagatcaacaagcaaagaattcct 286096
>emb|AJ557884.1|CGI557884 Crassostrea gigas partial mRNA for ribosomal protein L7 (rpl7 gene) Length = 782 Score = 50.1 bits (25), Expect = 0.005 Identities = 48/56 (85%) Strand = Plus / Plus Query: 281 gggtacccgaacctgaagagtgtgagggagttgatntacaagagaggttatggaaa 336 |||||||| ||||| |||||||||||||| ||| | ||||| || || |||||||| Sbjct: 400 gggtaccccaacctcaagagtgtgagggaattggtgtacaaaaggggatatggaaa 455
>gb|AY072288.1| Spodoptera frugiperda ribosomal protein L7 mRNA, complete cds Length = 876 Score = 48.1 bits (24), Expect = 0.020 Identities = 35/39 (89%) Strand = Plus / Plus Query: 284 tacccgaacctgaagagtgtgagggagttgatntacaag 322 ||||| |||||||||||||| ||||||||| | |||||| Sbjct: 508 taccccaacctgaagagtgttagggagttggtatacaag 546
>gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-11g7, complete sequence Length = 105682 Score = 46.1 bits (23), Expect = 0.081 Identities = 50/59 (84%) Strand = Plus / Plus Query: 144 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 |||||||||| ||| ||||||| | | |||||| | ||||||||||||||||||||| Sbjct: 1888 gtatcaatgcaatggacccaaaatcaaggaagattttgcagcttttgcgtttgagacag 1946 Score = 44.1 bits (22), Expect = 0.32 Identities = 39/45 (86%) Strand = Plus / Plus Query: 293 ctgaagagtgtgagggagttgatntacaagagaggttatggaaag 337 ||||||||||| || || ||||| |||||| | |||||||||||| Sbjct: 3017 ctgaagagtgtcagagaattgatctacaagcgcggttatggaaag 3061
>gb|BC085590.1| Danio rerio cDNA clone IMAGE:7264251, partial cds Length = 877 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 230 aacaaggccaccatcaacatgctccg 255 ||||||||| |||||||||||||||| Sbjct: 389 aacaaggcctccatcaacatgctccg 414
>gb|AY561515.1| Danio rerio ribosomal protein L7 (rpl7) mRNA, complete cds Length = 829 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 230 aacaaggccaccatcaacatgctccg 255 ||||||||| |||||||||||||||| Sbjct: 391 aacaaggcctccatcaacatgctccg 416
>ref|NM_213644.1| Danio rerio ribosomal protein L7 (rpl7), mRNA Length = 829 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 230 aacaaggccaccatcaacatgctccg 255 ||||||||| |||||||||||||||| Sbjct: 391 aacaaggcctccatcaacatgctccg 416
>gb|BC107515.1| Danio rerio ribosomal protein L7, mRNA (cDNA clone MGC:123071 IMAGE:7399953), complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 230 aacaaggccaccatcaacatgctccg 255 ||||||||| |||||||||||||||| Sbjct: 401 aacaaggcctccatcaacatgctccg 426
>gb|AY617897.1| Sterkiella histriomuscorum clone UGC1O0006_E04_F genomic sequence Length = 674 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 230 aacaaggccaccatcaacatgctccgcagggtcgagccata 270 |||||||| ||||||||||||||| | || || |||||||| Sbjct: 539 aacaaggcaaccatcaacatgctcagaagagttgagccata 499
>ref|XM_596585.2| PREDICTED: Bos taurus similar to aldehyde oxidase structural homolog 2 (LOC518393), mRNA Length = 5298 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acccaaagaccaagaagatcc 179 ||||||||||||||||||||| Sbjct: 311 acccaaagaccaagaagatcc 331
>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194991 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tggagtgttcctcaaggttaa 231 ||||||||||||||||||||| Sbjct: 59461 tggagtgttcctcaaggttaa 59441
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 1.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 309 agttgatntacaagagaggttatggaaagctcaacaagca 348 ||||| | |||||||||||||| || ||| |||||||||| Sbjct: 285589 agttggtgtacaagagaggttacggtaagatcaacaagca 285628
>gb|AF401559.1| Ictalurus punctatus ribosomal protein L7 mRNA, partial cds Length = 840 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 200 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgct 252 ||||| ||||| || || ||| ||||| | ||||||||| ||||||||||||| Sbjct: 389 cagatcttcaacggcgtcttcgtcaagctcaacaaggcctccatcaacatgct 441
>gb|AC022215.4|AC022215 Homo sapiens BAC clone RP11-764I5 from 3, complete sequence Length = 180068 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tggagtgttcctcaaggttaa 231 ||||||||||||||||||||| Sbjct: 69254 tggagtgttcctcaaggttaa 69274
>ref|NM_210820.1| Eremothecium gossypii AFL082Wp (AFL082W), mRNA Length = 732 Score = 42.1 bits (21), Expect = 1.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 309 agttgatntacaagagaggttatggaaagctcaacaagca 348 ||||| | |||||||||||||| || ||| |||||||||| Sbjct: 434 agttggtgtacaagagaggttacggtaagatcaacaagca 473
>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence Length = 208546 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 agacagatattcaatggagt 216 |||||||||||||||||||| Sbjct: 106413 agacagatattcaatggagt 106432
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ccaagaagatcctccagctt 187 |||||||||||||||||||| Sbjct: 1727713 ccaagaagatcctccagctt 1727732
>ref|XM_654606.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2094.2), mRNA Length = 5577 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ccaagaagatcctccagctt 187 |||||||||||||||||||| Sbjct: 4970 ccaagaagatcctccagctt 4951
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 cctgaagagtgtgagggagt 311 |||||||||||||||||||| Sbjct: 53455 cctgaagagtgtgagggagt 53436
>ref|XM_001003478.1| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ttcagcttaagcgtgaggcc 79 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>ref|XM_884324.2| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ttcagcttaagcgtgaggcc 79 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>ref|XM_915939.2| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ttcagcttaagcgtgaggcc 79 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ggattcctctgaccaacaac 370 |||||||||||||||||||| Sbjct: 96071 ggattcctctgaccaacaac 96052
>ref|XM_750090.1| Aspergillus fumigatus Af293 ATP-dependent RNA helicase (Afu2g08480) partial mRNA Length = 1896 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaaagaccaagaagatcct 180 |||||||||||||||||||| Sbjct: 1387 ccaaagaccaagaagatcct 1406
>ref|XM_566981.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l7 (CNA06360) partial mRNA Length = 937 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ccaagaagatcctccagctt 187 |||||||||||||||||||| Sbjct: 341 ccaagaagatcctccagctt 360
>ref|XM_811890.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506775.180) partial mRNA Length = 1812 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gaagagtgtgagggagttga 314 |||||||||||||||||||| Sbjct: 315 gaagagtgtgagggagttga 296
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggaaagctcaacaagcaaag 351 |||||||||||||||||||| Sbjct: 56918 ggaaagctcaacaagcaaag 56899
>ref|XM_804506.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511165.109) partial mRNA Length = 463 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gaagagtgtgagggagttga 314 |||||||||||||||||||| Sbjct: 315 gaagagtgtgagggagttga 296
>gb|AF526208.1| Argopecten irradians isolate iolsaicl25ct43cn48 ribosomal protein L7 mRNA, partial cds Length = 822 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 aacaaggccaccatcaacatgctc 253 ||||||||||| |||||||||||| Sbjct: 378 aacaaggccactatcaacatgctc 401
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ggattcctctgaccaacaac 370 |||||||||||||||||||| Sbjct: 158775 ggattcctctgaccaacaac 158794
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caagcagtacgccgaggagt 35 |||||||||||||||||||| Sbjct: 4547439 caagcagtacgccgaggagt 4547420
>gb|AF134206.1|AF134206 Emericella nidulans DopAp (dopA) mRNA, complete cds Length = 5800 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ccaagaagatcctccagctt 187 |||||||||||||||||||| Sbjct: 5116 ccaagaagatcctccagctt 5097
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 cctgaagagtgtgagggagt 311 |||||||||||||||||||| Sbjct: 69249 cctgaagagtgtgagggagt 69230
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete sequence Length = 212007 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tttgagacagatattcaatg 212 |||||||||||||||||||| Sbjct: 211258 tttgagacagatattcaatg 211239
>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete sequence Length = 115361 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tttgagacagatattcaatg 212 |||||||||||||||||||| Sbjct: 1251 tttgagacagatattcaatg 1232
>emb|BX293566.5| Mouse DNA sequence from clone RP23-441G5 on chromosome 2, complete sequence Length = 132841 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 aacaaggccaccatcaacat 249 |||||||||||||||||||| Sbjct: 58143 aacaaggccaccatcaacat 58162
>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c, complete sequence Length = 91116 Score = 40.1 bits (20), Expect = 5.0 Identities = 74/92 (80%) Strand = Plus / Plus Query: 143 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 202 ||||| ||| ||||||| || ||||| | || |||| | ||||| ||| | ||||||||| Sbjct: 19867 ggtattaatcccatgcatcctaagacaaggaggatcttgcagctgttgaggttgagacag 19926 Query: 203 atattcaatggagtgttcctcaaggttaacaa 234 || || |||||||| || || || |||||||| Sbjct: 19927 atttttaatggagtttttcttaaagttaacaa 19958
>emb|AL691489.20| Mouse DNA sequence from clone RP23-176N9 on chromosome 2, complete sequence Length = 194864 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ttcagcttaagcgtgaggcc 79 |||||||||||||||||||| Sbjct: 63769 ttcagcttaagcgtgaggcc 63788 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,942,748 Number of Sequences: 3902068 Number of extensions: 2942748 Number of successful extensions: 48807 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48579 Number of HSP's gapped (non-prelim): 204 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)