| Clone Name | bags37p23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1580 Score = 91.7 bits (46), Expect = 1e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 25 tcttgtttctggcaagggacaaggttgacaaagccgtcctgaatgtagctggagccgagc 84 ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1262 tcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagc 1321 Query: 85 tcaactcggccatcaccaatcctttcttcggagtcctctaaa 126 | || || || ||||| ||||||||||| |||||||| |||| Sbjct: 1322 tgaattctgctatcactaatcctttctttggagtcctttaaa 1363
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 1e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 25 tcttgtttctggcaagggacaaggttgacaaagccgtcctgaatgtagctggagccgagc 84 ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 18035630 tcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagc 18035689 Query: 85 tcaactcggccatcaccaatcctttcttcggagtcctctaaa 126 | || || || ||||| ||||||||||| |||||||| |||| Sbjct: 18035690 tgaattctgctatcactaatcctttctttggagtcctttaaa 18035731
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 91.7 bits (46), Expect = 1e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 25 tcttgtttctggcaagggacaaggttgacaaagccgtcctgaatgtagctggagccgagc 84 ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 97224 tcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagc 97283 Query: 85 tcaactcggccatcaccaatcctttcttcggagtcctctaaa 126 | || || || ||||| ||||||||||| |||||||| |||| Sbjct: 97284 tgaattctgctatcactaatcctttctttggagtcctttaaa 97325
>dbj|AK102956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115G09, full insert sequence Length = 1580 Score = 91.7 bits (46), Expect = 1e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 25 tcttgtttctggcaagggacaaggttgacaaagccgtcctgaatgtagctggagccgagc 84 ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1262 tcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagc 1321 Query: 85 tcaactcggccatcaccaatcctttcttcggagtcctctaaa 126 | || || || ||||| ||||||||||| |||||||| |||| Sbjct: 1322 tgaattctgctatcactaatcctttctttggagtcctttaaa 1363
>dbj|AK062243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E12, full insert sequence Length = 940 Score = 91.7 bits (46), Expect = 1e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 25 tcttgtttctggcaagggacaaggttgacaaagccgtcctgaatgtagctggagccgagc 84 ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 636 tcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagc 695 Query: 85 tcaactcggccatcaccaatcctttcttcggagtcctctaaa 126 | || || || ||||| ||||||||||| |||||||| |||| Sbjct: 696 tgaattctgctatcactaatcctttctttggagtcctttaaa 737
>gb|AY110441.1| Zea mays CL14665_2 mRNA sequence Length = 676 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 71 agctggagccgagctcaactcggccatcaccaatcctttcttcggagtcct 121 ||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 359 agctggagccgagctgaattctgccatcaccaatcctttcttcggagtcct 309
>gb|AY107699.1| Zea mays PCO077134 mRNA sequence Length = 916 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 26 cttgtttctggcaagggacaaggttgacaaagccgtcctgaatgtagctggagccgagct 85 ||||||| |||||||||| || || ||||| || ||||||| ||||||||||||||| Sbjct: 628 cttgtttttggcaagggaaaaagtcgacaaggctatcctgaacacagctggagccgagct 687 Query: 86 caactcggccatcaccaatcctttcttcggagtcct 121 || || |||||||||||||||||||| || ||||| Sbjct: 688 gaattctgccatcaccaatcctttctttggggtcct 723
>gb|AC134552.4| Mus musculus BAC clone RP24-279K10 from chromosome 8, complete sequence Length = 154774 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cacaggaaaaatttcacaca 268 |||||||||||||||||||| Sbjct: 111350 cacaggaaaaatttcacaca 111369
>ref|XM_900404.2| PREDICTED: Mus musculus inositol 1,4,5-trisphosphate 3-kinase B, transcript variant 2 (Itpkb), mRNA Length = 6656 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 agggaactggttctagcaag 287 |||||||||||||||||||| Sbjct: 5449 agggaactggttctagcaag 5468
>gb|AC121838.2| Mus musculus BAC clone RP24-74O18 from 1, complete sequence Length = 180961 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agggaactggttctagcaag 287 |||||||||||||||||||| Sbjct: 112498 agggaactggttctagcaag 112479
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tctaaaaccgagaaattccc 140 |||||||||||||||||||| Sbjct: 1721203 tctaaaaccgagaaattccc 1721222
>dbj|AK050506.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820005F14 product:1D-myo-inositol-trisphosphate 3-kinase (EC 2.7.1.127) B homolog [Rattus norvegicus], full insert sequence Length = 4595 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 agggaactggttctagcaag 287 |||||||||||||||||||| Sbjct: 3393 agggaactggttctagcaag 3412
>emb|AL359680.4|CNS05TEY Human chromosome 14 DNA sequence BAC R-716B8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175009 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccatcaccaatcctttctt 112 |||||||||||||||||||| Sbjct: 139411 gccatcaccaatcctttctt 139392
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gtgcaatcttgcttatgaga 236 |||||||||||||||||||| Sbjct: 118391 gtgcaatcttgcttatgaga 118410
>gb|AC166241.7| Mus musculus chromosome 8, clone RP23-125A7, complete sequence Length = 208067 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cacaggaaaaatttcacaca 268 |||||||||||||||||||| Sbjct: 28869 cacaggaaaaatttcacaca 28888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,422,600 Number of Sequences: 3902068 Number of extensions: 2422600 Number of successful extensions: 38801 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38755 Number of HSP's gapped (non-prelim): 41 length of query: 307 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 285 effective length of database: 17,147,199,772 effective search space: 4886951935020 effective search space used: 4886951935020 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)