ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags38e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466397.1| Oryza sativa (japonica cultivar-group), mRNA 226 2e-56
2ref|XM_506840.1| PREDICTED Oryza sativa (japonica cultivar-group... 226 2e-56
3dbj|AK102294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 2e-56
4dbj|AK059578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 2e-56
5gb|AF384036.1| Zea mays nucleosome/chromatin assembly factor A (... 184 7e-44
6gb|AF384035.1| Zea mays nucleosome/chromatin assembly factor A (... 155 6e-35
7gb|AY103799.1| Zea mays PCO060604 mRNA sequence 155 6e-35
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 121 8e-25
9dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 121 8e-25
10gb|AY918945.1| Schoenoplectus americanus clone SCAM.15 microsate... 78 1e-11
11ref|XM_472746.1| Oryza sativa (japonica cultivar-group), predic... 74 2e-10
12dbj|AK109192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 2e-10
13dbj|AK102874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 2e-10
14ref|NM_101738.2| Arabidopsis thaliana DNA binding AT1G18800 mRNA... 42 0.62
15gb|BT005248.1| Arabidopsis thaliana At1g18800 mRNA, complete cds 42 0.62
16gb|AY086761.1| Arabidopsis thaliana clone 27467 mRNA, complete s... 42 0.62
17dbj|AK118024.1| Arabidopsis thaliana At1g18800 mRNA for unknown ... 42 0.62
18ref|NM_106116.2| Arabidopsis thaliana DNA binding AT1G74560 tran... 40 2.4
19ref|NM_001036205.1| Arabidopsis thaliana DNA binding AT1G74560 t... 40 2.4
20ref|NM_105720.2| Arabidopsis thaliana kinase AT1G70520 mRNA, com... 40 2.4
21emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chro... 40 2.4
22emb|AL355865.6| Human DNA sequence from clone RP4-811I8 on chrom... 40 2.4
23gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, comp... 40 2.4
24gb|AY081733.1| Arabidopsis thaliana At1g74560/F1M20_24 mRNA, com... 40 2.4
25gb|AC115080.13| Mus musculus chromosome 7, clone RP24-464M7, com... 40 2.4
26gb|AF385720.1|AF385720 Arabidopsis thaliana At1g74560/F1M20_24 m... 40 2.4
27dbj|AK118924.1| Arabidopsis thaliana At1g70520 mRNA for putative... 40 2.4
28gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosom... 38 9.7
29gb|AY812235.1| Schistosoma japonicum SJCHGC04610 protein mRNA, p... 38 9.7
30emb|AL807761.8| Human DNA sequence from clone RP11-196I18 on chr... 38 9.7
31emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F... 38 9.7
32ref|XM_790696.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 9.7
33gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome... 38 9.7
34gb|AC165282.2| Mus musculus BAC clone RP24-465P22 from chromosom... 38 9.7
35emb|BX469889.7| Zebrafish DNA sequence from clone DKEY-156P3 in ... 38 9.7
36gb|AC010411.7| Homo sapiens chromosome 5 clone CTD-2165P17, comp... 38 9.7
37gb|AC008856.6|AC008856 Homo sapiens chromosome 5 clone CTD-2178N... 38 9.7
38gb|AC021021.9| Homo sapiens BAC clone RP11-557N1 from 2, complet... 38 9.7
39gb|AC129959.6| Bos taurus, clone RP42-518P7, complete sequence 38 9.7
40ref|XM_214477.2| PREDICTED: Rattus norvegicus geminin (predicted... 38 9.7
41emb|BX255931.5| Zebrafish DNA sequence from clone CH211-195B2 in... 38 9.7
42emb|BX470166.11| Zebrafish DNA sequence from clone CH211-238N5 i... 38 9.7
43gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer... 38 9.7
44gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 38 9.7
45gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom... 38 9.7
46emb|AL772270.24| Mouse DNA sequence from clone RP23-272I16 on ch... 38 9.7
47emb|AL929135.9| Zebrafish DNA sequence from clone CH211-125A22, ... 38 9.7
48emb|CR956418.10| Pig DNA sequence from clone PigE-219P24 on chro... 38 9.7 
>ref|XM_466397.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1109

 Score =  226 bits (114), Expect = 2e-56
 Identities = 168/186 (90%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 284 aagctagtgacaaggttttggaggtcgagcagaaatacagtgagattcgcagacctgtct 343

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           |||| || ||| ||||| | ||| ||||||| || ||||| ||||||||||||||||| |
Sbjct: 344 atctccgaaggagtgacgttatccaaacaatccccgacttctggctgacagcgtttctga 403

                                                                       
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtacttgg 189
           |||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 404 gtcatcctctacttagtgagcttttgaccgaagaggatcaaaagatgttcaagtacctgg 463

                 
Query: 190 agtctg 195
           ||||||
Sbjct: 464 agtctg 469
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>ref|XM_506840.1| PREDICTED Oryza sativa (japonica cultivar-group), B1342F01.11 mRNA
          Length = 1315

 Score =  226 bits (114), Expect = 2e-56
 Identities = 168/186 (90%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 295 aagctagtgacaaggttttggaggtcgagcagaaatacagtgagattcgcagacctgtct 354

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           |||| || ||| ||||| | ||| ||||||| || ||||| ||||||||||||||||| |
Sbjct: 355 atctccgaaggagtgacgttatccaaacaatccccgacttctggctgacagcgtttctga 414

                                                                       
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtacttgg 189
           |||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 415 gtcatcctctacttagtgagcttttgaccgaagaggatcaaaagatgttcaagtacctgg 474

                 
Query: 190 agtctg 195
           ||||||
Sbjct: 475 agtctg 480
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>dbj|AK102294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L07, full
           insert sequence
          Length = 1314

 Score =  226 bits (114), Expect = 2e-56
 Identities = 168/186 (90%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 294 aagctagtgacaaggttttggaggtcgagcagaaatacagtgagattcgcagacctgtct 353

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           |||| || ||| ||||| | ||| ||||||| || ||||| ||||||||||||||||| |
Sbjct: 354 atctccgaaggagtgacgttatccaaacaatccccgacttctggctgacagcgtttctga 413

                                                                       
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtacttgg 189
           |||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 414 gtcatcctctacttagtgagcttttgaccgaagaggatcaaaagatgttcaagtacctgg 473

                 
Query: 190 agtctg 195
           ||||||
Sbjct: 474 agtctg 479
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>dbj|AK059578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A12, full
           insert sequence
          Length = 1109

 Score =  226 bits (114), Expect = 2e-56
 Identities = 168/186 (90%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 284 aagctagtgacaaggttttggaggtcgagcagaaatacagtgagattcgcagacctgtct 343

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           |||| || ||| ||||| | ||| ||||||| || ||||| ||||||||||||||||| |
Sbjct: 344 atctccgaaggagtgacgttatccaaacaatccccgacttctggctgacagcgtttctga 403

                                                                       
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtacttgg 189
           |||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 404 gtcatcctctacttagtgagcttttgaccgaagaggatcaaaagatgttcaagtacctgg 463

                 
Query: 190 agtctg 195
           ||||||
Sbjct: 464 agtctg 469
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>gb|AF384036.1| Zea mays nucleosome/chromatin assembly factor A (nfa104) mRNA,
           complete cds
          Length = 907

 Score =  184 bits (93), Expect = 7e-44
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 244 aagcaagtgacaaggttatggaggtggagcagaaatacagtgagattcgcagacctgtct 303

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           ||||   |||| ||||||| ||||| || || || ||||||||||| ||||||||| | |
Sbjct: 304 atctcaagaggggtgacattatcaagaccatcccggacttttggctcacagcgtttttga 363

                                                                       
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtacttgg 189
           | |||||||| || ||||||||| |||||||||||||||| ||||| |||||||||||||
Sbjct: 364 gccatcctctactaagtgagcttctgactgaagaggatcagaagatattcaagtacttgg 423

            
Query: 190 a 190
           |
Sbjct: 424 a 424
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>gb|AF384035.1| Zea mays nucleosome/chromatin assembly factor A (nfa103) mRNA,
           complete cds
          Length = 958

 Score =  155 bits (78), Expect = 6e-35
 Identities = 153/178 (85%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||||||||| |||||| ||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 278 aagcaagtgacaaggttatggaggtggagcagaaatacagtgagatccgcagacctgtct 337

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           ||||   |||| ||||||| ||||| || || || ||||||||||| ||||||||| | |
Sbjct: 338 atctcaagaggggtgacattatcaagaccatcccggacttttggctcacagcgtttatga 397

                                                                     
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtactt 187
           | ||||||||  | ||||||||| ||||||||||||| || ||||| |||||||||||
Sbjct: 398 gccatcctctattaagtgagcttctgactgaagaggaccagaagatattcaagtactt 455
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>gb|AY103799.1| Zea mays PCO060604 mRNA sequence
          Length = 1140

 Score =  155 bits (78), Expect = 6e-35
 Identities = 153/178 (85%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
           |||||||||| |||||| ||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 284 aagcaagtgacaaggttatggaggtggagcagaaatacagtgagatccgcagacctgtct 343

                                                                       
Query: 70  atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcgtttctaa 129
           ||||   |||| ||||||| ||||| || || || ||||||||||| ||||||||| | |
Sbjct: 344 atctcaagaggggtgacattatcaagaccatcccggacttttggctcacagcgtttatga 403

                                                                     
Query: 130 gtcatcctctcctcagtgagcttttgactgaagaggatcaaaagatgttcaagtactt 187
           | ||||||||  | ||||||||| ||||||||||||| || ||||| |||||||||||
Sbjct: 404 gccatcctctattaagtgagcttctgactgaagaggaccagaagatattcaagtactt 461
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  121 bits (61), Expect = 8e-25
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                            
Query: 10       aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
                |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 22174047 aagctagtgacaaggttttggaggtcgagcagaaatacagtgagattcgcagacctgtct 22173988

                                                                     
Query: 70       atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcg 122
                |||| || ||| ||||| | ||| ||||||| || ||||| ||||||||||||
Sbjct: 22173987 atctccgaaggagtgacgttatccaaacaatccccgacttctggctgacagcg 22173935



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                    
Query: 122      gtttctaagtcatcctctcctcagtgagcttttgactgaagaggatcaaaag 173
                |||||| ||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 22173837 gtttctgagtcatcctctacttagtgagcttttgaccgaagaggatcaaaag 22173786



 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 172      agatgttcaagtacttggagtctg 195
                |||||||||||||| |||||||||
Sbjct: 22173648 agatgttcaagtacctggagtctg 22173625
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>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1342F01
          Length = 153287

 Score =  121 bits (61), Expect = 8e-25
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 10    aagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgcagacctgtct 69
             |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 69891 aagctagtgacaaggttttggaggtcgagcagaaatacagtgagattcgcagacctgtct 69832

                                                                  
Query: 70    atcttcggaggtgtgacatcatcaaaacaattccagacttttggctgacagcg 122
             |||| || ||| ||||| | ||| ||||||| || ||||| ||||||||||||
Sbjct: 69831 atctccgaaggagtgacgttatccaaacaatccccgacttctggctgacagcg 69779



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                 
Query: 122   gtttctaagtcatcctctcctcagtgagcttttgactgaagaggatcaaaag 173
             |||||| ||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 69681 gtttctgagtcatcctctacttagtgagcttttgaccgaagaggatcaaaag 69630



 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 172   agatgttcaagtacttggagtctg 195
             |||||||||||||| |||||||||
Sbjct: 69492 agatgttcaagtacctggagtctg 69469
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>gb|AY918945.1| Schoenoplectus americanus clone SCAM.15 microsatellite sequence
          Length = 594

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 97/115 (84%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taatgaagnaagcaagtgataaggttttggaggttgagcagaagtacagtgagattcgca 60
           |||||||| ||||||| |||||||| |||||||| ||| |||| || | |||||| ||||
Sbjct: 391 taatgaag-aagcaagcgataaggtattggaggtggaggagaaatataatgagatccgca 333

                                                                  
Query: 61  gacctgtctatcttcggaggtgtgacatcatcaaaacaattccagacttttggct 115
           ||||||| ||| |  |  ||  ||||||||||||||| |||||||||||||||||
Sbjct: 332 gacctgtttatgtcagacggaatgacatcatcaaaactattccagacttttggct 278
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>ref|XM_472746.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  aattccagacttttggctgacagcgtttctaagtcatcctctcctcagtgagcttttgac 157
           |||||| ||||| ||||||||||||||||| || |||||| | ||  |||| || || ||
Sbjct: 222 aattcctgacttctggctgacagcgtttcttagccatcctatgcttggtgaactattaac 281

                                                
Query: 158 tgaagaggatcaaaagatgttcaagtacttggagtct 194
           |||||| ||||||||||| |||||  |||||||||||
Sbjct: 282 tgaagatgatcaaaagattttcaaacacttggagtct 318
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>dbj|AK109192.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B05, full
           insert sequence
          Length = 823

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  aattccagacttttggctgacagcgtttctaagtcatcctctcctcagtgagcttttgac 157
           |||||| ||||| ||||||||||||||||| || |||||| | ||  |||| || || ||
Sbjct: 377 aattcctgacttctggctgacagcgtttcttagccatcctatgcttggtgaactattaac 436

                                                
Query: 158 tgaagaggatcaaaagatgttcaagtacttggagtct 194
           |||||| ||||||||||| |||||  |||||||||||
Sbjct: 437 tgaagatgatcaaaagattttcaaacacttggagtct 473
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>dbj|AK102874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112C19, full
           insert sequence
          Length = 1245

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  aattccagacttttggctgacagcgtttctaagtcatcctctcctcagtgagcttttgac 157
           |||||| ||||| ||||||||||||||||| || |||||| | ||  |||| || || ||
Sbjct: 377 aattcctgacttctggctgacagcgtttcttagccatcctatgcttggtgaactattaac 436

                                                
Query: 158 tgaagaggatcaaaagatgttcaagtacttggagtct 194
           |||||| ||||||||||| |||||  |||||||||||
Sbjct: 437 tgaagatgatcaaaagattttcaaacacttggagtct 473
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>ref|NM_101738.2| Arabidopsis thaliana DNA binding AT1G18800 mRNA, complete cds
          Length = 1257

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 145 gtgagcttttgactgaagaggatcaaaagatgttcaa 181
           |||| |||||||||||||| || |||||||| |||||
Sbjct: 396 gtgaacttttgactgaagaagaccaaaagattttcaa 432
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>gb|BT005248.1| Arabidopsis thaliana At1g18800 mRNA, complete cds
          Length = 687

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 145 gtgagcttttgactgaagaggatcaaaagatgttcaa 181
           |||| |||||||||||||| || |||||||| |||||
Sbjct: 263 gtgaacttttgactgaagaagaccaaaagattttcaa 299
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>gb|AY086761.1| Arabidopsis thaliana clone 27467 mRNA, complete sequence
          Length = 1104

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 145 gtgagcttttgactgaagaggatcaaaagatgttcaa 181
           |||| |||||||||||||| || |||||||| |||||
Sbjct: 396 gtgaacttttgactgaagaagaccaaaagattttcaa 432
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>dbj|AK118024.1| Arabidopsis thaliana At1g18800 mRNA for unknown protein, complete
           cds, clone: RAFL19-23-O10
          Length = 1248

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 145 gtgagcttttgactgaagaggatcaaaagatgttcaa 181
           |||| |||||||||||||| || |||||||| |||||
Sbjct: 386 gtgaacttttgactgaagaagaccaaaagattttcaa 422
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>ref|NM_106116.2| Arabidopsis thaliana DNA binding AT1G74560 transcript variant
           AT1G74560.1 mRNA, complete cds
          Length = 1075

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 153 ttgactgaagaggatcaaaagatgttcaagtacttg 188
           ||||||||||| || |||||||| || |||||||||
Sbjct: 378 ttgactgaagaagaccaaaagatttttaagtacttg 413
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>ref|NM_001036205.1| Arabidopsis thaliana DNA binding AT1G74560 transcript variant
           AT1G74560.2 mRNA, complete cds
          Length = 1146

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 153 ttgactgaagaggatcaaaagatgttcaagtacttg 188
           ||||||||||| || |||||||| || |||||||||
Sbjct: 424 ttgactgaagaagaccaaaagatttttaagtacttg 459
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>ref|NM_105720.2| Arabidopsis thaliana kinase AT1G70520 mRNA, complete cds
          Length = 2145

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 gaagaggatcaaaagatgtt 178
           ||||||||||||||||||||
Sbjct: 963 gaagaggatcaaaagatgtt 982
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>emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chromosome 1, complete
              sequence
          Length = 164200

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    actgaagaggatcaaaagat 175
              ||||||||||||||||||||
Sbjct: 124278 actgaagaggatcaaaagat 124297
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>emb|AL355865.6| Human DNA sequence from clone RP4-811I8 on chromosome 1p34.1-35.3,
             complete sequence
          Length = 74269

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ttttggaggttgagcagaag 44
             ||||||||||||||||||||
Sbjct: 11598 ttttggaggttgagcagaag 11617
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>gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, complete sequence
          Length = 193326

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  ctctcctcagtgagcttttg 155
            ||||||||||||||||||||
Sbjct: 8448 ctctcctcagtgagcttttg 8467
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>gb|AY081733.1| Arabidopsis thaliana At1g74560/F1M20_24 mRNA, complete cds
          Length = 771

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 153 ttgactgaagaggatcaaaagatgttcaagtacttg 188
           ||||||||||| || |||||||| || |||||||||
Sbjct: 283 ttgactgaagaagaccaaaagatttttaagtacttg 318
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>gb|AC115080.13| Mus musculus chromosome 7, clone RP24-464M7, complete sequence
          Length = 158221

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ctctcctcagtgagcttttg 155
              ||||||||||||||||||||
Sbjct: 122005 ctctcctcagtgagcttttg 122024
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>gb|AF385720.1|AF385720 Arabidopsis thaliana At1g74560/F1M20_24 mRNA, complete cds
          Length = 1009

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 153 ttgactgaagaggatcaaaagatgttcaagtacttg 188
           ||||||||||| || |||||||| || |||||||||
Sbjct: 380 ttgactgaagaagaccaaaagatttttaagtacttg 415
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>dbj|AK118924.1| Arabidopsis thaliana At1g70520 mRNA for putative protein kinase,
           complete cds, clone: RAFL21-26-G23
          Length = 2145

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 gaagaggatcaaaagatgtt 178
           ||||||||||||||||||||
Sbjct: 963 gaagaggatcaaaagatgtt 982
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>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 139    tcctcagtgagcttttgactgaa 161
              |||||||||| ||||||||||||
Sbjct: 115239 tcctcagtgaccttttgactgaa 115261
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>gb|AY812235.1| Schistosoma japonicum SJCHGC04610 protein mRNA, partial cds
          Length = 681

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 156 actgaagaggatcaaaagatgtt 178
           |||||||||||||||| ||||||
Sbjct: 83  actgaagaggatcaaatgatgtt 105
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>emb|AL807761.8| Human DNA sequence from clone RP11-196I18 on chromosome 9 Contains the
             5' end of a novel gene (FLJ40387), a novel pseudogene, a
             MMRP19 pseudogene and a novel gene, complete sequence
          Length = 103861

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   tcctctcctcagtgagctt 152
             |||||||||||||||||||
Sbjct: 86837 tcctctcctcagtgagctt 86855
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>emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F12 on chromosome 6p22.3-24
             Contains the 5' end of a novel gene, complete sequence
          Length = 123489

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 173   gatgttcaagtacttggagtctg 195
             |||||||||| ||||||||||||
Sbjct: 38178 gatgttcaagaacttggagtctg 38156
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>ref|XM_790696.1| PREDICTED: Strongylocentrotus purpuratus similar to I-kappa-B-related
            protein (LOC591115), mRNA
          Length = 4734

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtttctaagtcatcctctc 140
            |||||||||||||||||||
Sbjct: 2992 gtttctaagtcatcctctc 3010
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>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence
          Length = 186421

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    attccagacttttggctga 117
             |||||||||||||||||||
Sbjct: 34845 attccagacttttggctga 34827
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>gb|AC165282.2| Mus musculus BAC clone RP24-465P22 from chromosome 16, complete sequence
          Length = 185134

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     attccagacttttggctga 117
              |||||||||||||||||||
Sbjct: 172951 attccagacttttggctga 172933
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>emb|BX469889.7| Zebrafish DNA sequence from clone DKEY-156P3 in linkage group 18,
             complete sequence
          Length = 177975

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    gtgtgacatcatcaaaaca 98
             |||||||||||||||||||
Sbjct: 83111 gtgtgacatcatcaaaaca 83093
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>gb|AC010411.7| Homo sapiens chromosome 5 clone CTD-2165P17, complete sequence
          Length = 177807

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 94     aaacaattccagacttttg 112
              |||||||||||||||||||
Sbjct: 136553 aaacaattccagacttttg 136535
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>gb|AC008856.6|AC008856 Homo sapiens chromosome 5 clone CTD-2178N20, complete sequence
          Length = 154229

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 94     aaacaattccagacttttg 112
              |||||||||||||||||||
Sbjct: 154103 aaacaattccagacttttg 154085
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>gb|AC021021.9| Homo sapiens BAC clone RP11-557N1 from 2, complete sequence
          Length = 169202

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     aaaacaattccagactttt 111
              |||||||||||||||||||
Sbjct: 136227 aaaacaattccagactttt 136209
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>gb|AC129959.6| Bos taurus, clone RP42-518P7, complete sequence
          Length = 211988

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     acagtgagattcgcagacc 64
              |||||||||||||||||||
Sbjct: 155200 acagtgagattcgcagacc 155182
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>ref|XM_214477.2| PREDICTED: Rattus norvegicus geminin (predicted) (Gmnn_predicted),
           mRNA
          Length = 920

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 34  ttgagcagaagtacagtgagatt 56
           ||||||||||| |||||||||||
Sbjct: 462 ttgagcagaaggacagtgagatt 484
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>emb|BX255931.5| Zebrafish DNA sequence from clone CH211-195B2 in linkage group 22,
            complete sequence
          Length = 189327

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 119  agcgtttctaagtcatcct 137
            |||||||||||||||||||
Sbjct: 6865 agcgtttctaagtcatcct 6883
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>emb|BX470166.11| Zebrafish DNA sequence from clone CH211-238N5 in linkage group 18,
             complete sequence
          Length = 117241

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    gtgtgacatcatcaaaaca 98
             |||||||||||||||||||
Sbjct: 63550 gtgtgacatcatcaaaaca 63568
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>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 211603

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 121   cgtttctaagtcatcctct 139
             |||||||||||||||||||
Sbjct: 85753 cgtttctaagtcatcctct 85735
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 121  cgtttctaagtcatcctct 139
            |||||||||||||||||||
Sbjct: 7172 cgtttctaagtcatcctct 7154
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>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 139    tcctcagtgagcttttgactgaa 161
              |||||||||| ||||||||||||
Sbjct: 183780 tcctcagtgaccttttgactgaa 183802
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>emb|AL772270.24| Mouse DNA sequence from clone RP23-272I16 on chromosome 4, complete
             sequence
          Length = 146140

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    catcatcaaaacaattcca 104
             |||||||||||||||||||
Sbjct: 84906 catcatcaaaacaattcca 84888
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>emb|AL929135.9| Zebrafish DNA sequence from clone CH211-125A22, complete sequence
          Length = 167531

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    agcgtttctaagtcatcct 137
              |||||||||||||||||||
Sbjct: 138379 agcgtttctaagtcatcct 138361
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>emb|CR956418.10| Pig DNA sequence from clone PigE-219P24 on chromosome 6, complete
             sequence
          Length = 173652

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    ttttggaggttgagcagaa 43
             |||||||||||||||||||
Sbjct: 26210 ttttggaggttgagcagaa 26228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,757,659
Number of Sequences: 3902068
Number of extensions: 1757659
Number of successful extensions: 120613
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120510
Number of HSP's gapped (non-prelim): 103
length of query: 195
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 173
effective length of database: 17,147,199,772
effective search space: 2966465560556
effective search space used: 2966465560556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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