ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37o20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL844225.9| Mouse DNA sequence from clone RP23-119M24 on chr... 46 0.12
2ref|NM_189426.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
3ref|NM_189425.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
4ref|NM_189423.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
5ref|XM_457498.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 1.8
6gb|AY585869.1| Synthetic construct recombinant anti-CD64 immunot... 42 1.8
7emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 42 1.8
8emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.8
9emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 42 1.8
10emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 42 1.8
11gb|K01397.1|PSEETA Pseudomonas aeruginosa exotoxin type A gene, ... 42 1.8
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
14gb|AC064856.5| Homo sapiens BAC clone RP11-264N11 from 2, comple... 42 1.8
15gb|AE004544.1| Pseudomonas aeruginosa PAO1, section 105 of 529 o... 42 1.8
16gb|AF227424.1|AF227424 Pseudomonas aeruginosa isolate 6 exotoxin... 42 1.8
17gb|AF227423.1|AF227423 Pseudomonas aeruginosa isolate 5 exotoxin... 42 1.8
18gb|AF227420.1|AF227420 Pseudomonas aeruginosa isolate 2 exotoxin... 42 1.8
19gb|AF227419.1|AF227419 Pseudomonas aeruginosa isolate 1 exotoxin... 42 1.8
20gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chrom... 42 1.8
21dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
22gb|U78761.1|XXU78761 Synthetic construct RFT5(scFv)ETA immunotox... 42 1.8
23emb|AL731697.16| Mouse DNA sequence from clone RP23-188L7 on chr... 42 1.8
24ref|XM_467669.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.2
25gb|AC107838.16| Mus musculus chromosome 1, clone RP23-274N9, com... 40 7.2
26gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
27gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
28gb|AC119969.15| Mus musculus chromosome 7, clone RP24-474K16, co... 40 7.2
29gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
30ref|XM_954667.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.2
31ref|XM_331109.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.2
32gb|AY509596.1| Homo sapiens transcription factor Dp-2 (E2F dimer... 40 7.2
33gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 7.2
34gb|AC127036.3| Mus musculus BAC clone RP23-39I4 from chromosome ... 40 7.2
35gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Canc... 40 7.2
36gb|AC079231.6| Homo sapiens BAC clone RP11-348A21 from 7, comple... 40 7.2
37gb|AC105305.8| Mus musculus strain C57BL/6J clone rp23-80n4 map ... 40 7.2
38emb|CR847786.13| Zebrafish DNA sequence from clone DKEYP-9B4 in ... 40 7.2
39gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 7.2
40emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.2
41gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop... 40 7.2
42gb|AC084209.6| Homo sapiens BAC clone RP11-462C24 from 4, comple... 40 7.2
43gb|AC016650.6| Homo sapiens chromosome 5 clone RPCI-1_167J12, co... 40 7.2
44gb|AC092335.2| Homo sapiens chromosome 5 clone RP11-19O2, comple... 40 7.2
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
48dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
50dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
51emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4,... 40 7.2
52emb|AL731580.3|OSJN00227 Oryza sativa genomic DNA, chromosome 4,... 40 7.2
53gb|AC068490.4| Homo sapiens BAC clone RP11-789K7 from 2, complet... 40 7.2
54gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 7.2
55dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
56dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.2
57dbj|AP007273.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
58dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
59dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
60dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
61dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, comp... 40 7.2
62emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.2
63gb|AC090656.42| Mus musculus strain C57BL/6J chromosome 17 clone... 40 7.2
64gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.2
65gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
66emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4,... 40 7.2
67dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2 
>emb|AL844225.9| Mouse DNA sequence from clone RP23-119M24 on chromosome 2, complete
              sequence
          Length = 137220

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 361    aatagaataaacaaaagaaagcaacaa 387
              |||||||||||||||| ||||||||||
Sbjct: 108941 aatagaataaacaaaacaaagcaacaa 108967
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>ref|NM_189426.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  tcaccgaggaggacagcctcg 85
           |||||||||||||||||||||
Sbjct: 743 tcaccgaggaggacagcctcg 763
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>ref|NM_189425.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 951

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  tcaccgaggaggacagcctcg 85
           |||||||||||||||||||||
Sbjct: 701 tcaccgaggaggacagcctcg 721
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>ref|NM_189423.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  tcaccgaggaggacagcctcg 85
           |||||||||||||||||||||
Sbjct: 725 tcaccgaggaggacagcctcg 745
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>ref|XM_457498.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B12738g)
           partial mRNA
          Length = 867

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 369 aaacaaaagaaagcaacaagaggta 393
           |||||||||||||||| ||||||||
Sbjct: 787 aaacaaaagaaagcaagaagaggta 811
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>gb|AY585869.1| Synthetic construct recombinant anti-CD64 immunotoxin (H22(scFv)/ETA'
            fusion) mRNA, complete cds
          Length = 2025

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 19   gcggtgttcctcggcgacggcggcg 43
            |||| ||||||||||||||||||||
Sbjct: 1375 gcggagttcctcggcgacggcggcg 1399
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 369    aaacaaaagaaagcaacaagaggta 393
              |||||||||||||||| ||||||||
Sbjct: 989058 aaacaaaagaaagcaagaagaggta 989082
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>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 13     gccgaggcggtgttcctcggcgacg 37
              ||||||||||||||||| |||||||
Sbjct: 289685 gccgaggcggtgttcctgggcgacg 289709
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>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 13     gccgaggcggtgttcctcggcgacg 37
              ||||||||||||||||| |||||||
Sbjct: 294102 gccgaggcggtgttcctgggcgacg 294126
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 13     gccgaggcggtgttcctcggcgacg 37
              ||||||||||||||||| |||||||
Sbjct: 254424 gccgaggcggtgttcctgggcgacg 254448
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>gb|K01397.1|PSEETA Pseudomonas aeruginosa exotoxin type A gene, complete cds
          Length = 2760

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 19   gcggtgttcctcggcgacggcggcg 43
            |||| ||||||||||||||||||||
Sbjct: 2012 gcggagttcctcggcgacggcggcg 2036
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 65       tcaccgaggaggacagcctcg 85
                |||||||||||||||||||||
Sbjct: 42699882 tcaccgaggaggacagcctcg 42699902



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 65       tcaccgaggaggacagcctcg 85
                |||||||||||||||||||||
Sbjct: 42696890 tcaccgaggaggacagcctcg 42696870



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 65       tcaccgaggaggacagcctcg 85
                |||||||||||||||||||||
Sbjct: 42692789 tcaccgaggaggacagcctcg 42692769
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>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    tcaccgaggaggacagcctcg 85
             |||||||||||||||||||||
Sbjct: 32647 tcaccgaggaggacagcctcg 32667



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    tcaccgaggaggacagcctcg 85
             |||||||||||||||||||||
Sbjct: 29655 tcaccgaggaggacagcctcg 29635



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    tcaccgaggaggacagcctcg 85
             |||||||||||||||||||||
Sbjct: 25554 tcaccgaggaggacagcctcg 25534
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>gb|AC064856.5| Homo sapiens BAC clone RP11-264N11 from 2, complete sequence
          Length = 107706

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   tggatcatacagcagttcttt 149
             |||||||||||||||||||||
Sbjct: 46961 tggatcatacagcagttcttt 46941
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>gb|AE004544.1| Pseudomonas aeruginosa PAO1, section 105 of 529 of the complete genome
          Length = 11478

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 19    gcggtgttcctcggcgacggcggcg 43
             |||| ||||||||||||||||||||
Sbjct: 10058 gcggagttcctcggcgacggcggcg 10034
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>gb|AF227424.1|AF227424 Pseudomonas aeruginosa isolate 6 exotoxin A (toxA) gene, partial
          cds
          Length = 683

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 19 gcggtgttcctcggcgacggcggcg 43
          |||| ||||||||||||||||||||
Sbjct: 33 gcggagttcctcggcgacggcggcg 57
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>gb|AF227423.1|AF227423 Pseudomonas aeruginosa isolate 5 exotoxin A (toxA) gene, partial
          cds
          Length = 683

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 19 gcggtgttcctcggcgacggcggcg 43
          |||| ||||||||||||||||||||
Sbjct: 33 gcggagttcctcggcgacggcggcg 57
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>gb|AF227420.1|AF227420 Pseudomonas aeruginosa isolate 2 exotoxin A (toxA) pseudogene,
          partial sequence
          Length = 683

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 19 gcggtgttcctcggcgacggcggcg 43
          |||| ||||||||||||||||||||
Sbjct: 33 gcggagttcctcggcgacggcggcg 57
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>gb|AF227419.1|AF227419 Pseudomonas aeruginosa isolate 1 exotoxin A (toxA) gene, partial
          cds
          Length = 683

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 19 gcggtgttcctcggcgacggcggcg 43
          |||| ||||||||||||||||||||
Sbjct: 33 gcggagttcctcggcgacggcggcg 57
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>gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chromosome unknown,
             complete sequence
          Length = 209305

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   tggatcatacagcagttcttt 149
             |||||||||||||||||||||
Sbjct: 48798 tggatcatacagcagttcttt 48778
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>dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J03, full
           insert sequence
          Length = 1352

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  tcaccgaggaggacagcctcg 85
           |||||||||||||||||||||
Sbjct: 895 tcaccgaggaggacagcctcg 915
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>gb|U78761.1|XXU78761 Synthetic construct RFT5(scFv)ETA immunotoxin fusion protein gene,
            complete cds
          Length = 1944

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 19   gcggtgttcctcggcgacggcggcg 43
            |||| ||||||||||||||||||||
Sbjct: 1294 gcggagttcctcggcgacggcggcg 1318
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>emb|AL731697.16| Mouse DNA sequence from clone RP23-188L7 on chromosome X, complete
            sequence
          Length = 200250

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  agaataaacaaaagaaagcaa 384
            |||||||||||||||||||||
Sbjct: 9730 agaataaacaaaagaaagcaa 9710
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>ref|XM_467669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ttcctcggcgacggcggcgt 44
           ||||||||||||||||||||
Sbjct: 574 ttcctcggcgacggcggcgt 593
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>gb|AC107838.16| Mus musculus chromosome 1, clone RP23-274N9, complete sequence
          Length = 160232

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   acaaaagaaagcaacaagag 390
             ||||||||||||||||||||
Sbjct: 38025 acaaaagaaagcaacaagag 38006
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>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032D10 map E20933S, complete sequence
          Length = 146118

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgtcggcggcggcgactct 102
             ||||||||||||||||||||
Sbjct: 27289 tcgtcggcggcggcgactct 27308
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
              complete sequence
          Length = 146303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     gcctcgtcggcggcggcgac 99
              ||||||||||||||||||||
Sbjct: 101236 gcctcgtcggcggcggcgac 101255
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>gb|AC119969.15| Mus musculus chromosome 7, clone RP24-474K16, complete sequence
          Length = 145231

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   tctctgtatgactctatcct 353
             ||||||||||||||||||||
Sbjct: 48710 tctctgtatgactctatcct 48729
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  gcctcgtcggcggcggcgac 99
           ||||||||||||||||||||
Sbjct: 510 gcctcgtcggcggcggcgac 529
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>ref|XM_954667.1| Neurospora crassa OR74A hypothetical protein (NCU02334.1) partial
          mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 30 cggcgacggcggcgtcagcgtcga 53
          |||||||||||||||| |||||||
Sbjct: 57 cggcgacggcggcgtcggcgtcga 80
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>ref|XM_331109.1| Neurospora crassa OR74A hypothetical protein (NCU02334.1) partial
          mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 30 cggcgacggcggcgtcagcgtcga 53
          |||||||||||||||| |||||||
Sbjct: 57 cggcgacggcggcgtcggcgtcga 80
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>gb|AY509596.1| Homo sapiens transcription factor Dp-2 (E2F dimerization partner 2)
             (TFDP2) gene, complete cds
          Length = 81085

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 361   aatagaataaacaaaagaaagcaa 384
             |||| |||||||||||||||||||
Sbjct: 74824 aataaaataaacaaaagaaagcaa 74801
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    cggcgacggcggcgtcagcg 49
             ||||||||||||||||||||
Sbjct: 31898 cggcgacggcggcgtcagcg 31917
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>gb|AC127036.3| Mus musculus BAC clone RP23-39I4 from chromosome 3, complete sequence
          Length = 190168

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   gttcctggacatcatcattg 292
             ||||||||||||||||||||
Sbjct: 71201 gttcctggacatcatcattg 71182
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>gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 215077

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 361  aatagaataaacaaaagaaagcaa 384
            |||| |||||||||||||||||||
Sbjct: 5786 aataaaataaacaaaagaaagcaa 5763
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>gb|AC079231.6| Homo sapiens BAC clone RP11-348A21 from 7, complete sequence
          Length = 87047

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   tggcagagccctctctgtat 342
             ||||||||||||||||||||
Sbjct: 46712 tggcagagccctctctgtat 46693
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>gb|AC105305.8| Mus musculus strain C57BL/6J clone rp23-80n4 map 17, complete sequence
          Length = 214567

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 357    cagcaatagaataaacaaaagaaa 380
              |||||||| |||||||||||||||
Sbjct: 104670 cagcaataaaataaacaaaagaaa 104693
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>emb|CR847786.13| Zebrafish DNA sequence from clone DKEYP-9B4 in linkage group 13,
             complete sequence
          Length = 156551

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   atagaataaacaaaagaaag 381
             ||||||||||||||||||||
Sbjct: 70434 atagaataaacaaaagaaag 70453
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    aaaatgctattgaggtggca 327
              ||||||||||||||||||||
Sbjct: 316387 aaaatgctattgaggtggca 316406
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 3       tcggcacgaggccgaggcggtgttcctcggcg 34
               ||||||||||||||| |||||  |||||||||
Sbjct: 1812870 tcggcacgaggccgatgcggttgtcctcggcg 1812839
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>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
             biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    tcctcggcgacggcggcgtc 45
             ||||||||||||||||||||
Sbjct: 57712 tcctcggcgacggcggcgtc 57693
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>gb|AC084209.6| Homo sapiens BAC clone RP11-462C24 from 4, complete sequence
          Length = 151980

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    aataaacaaaagaaagcaac 385
              ||||||||||||||||||||
Sbjct: 116199 aataaacaaaagaaagcaac 116218
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>gb|AC016650.6| Homo sapiens chromosome 5 clone RPCI-1_167J12, complete sequence
          Length = 184886

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   atggatcatacagcagttct 147
             ||||||||||||||||||||
Sbjct: 58297 atggatcatacagcagttct 58316
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>gb|AC092335.2| Homo sapiens chromosome 5 clone RP11-19O2, complete sequence
          Length = 164819

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   atggatcatacagcagttct 147
             ||||||||||||||||||||
Sbjct: 17782 atggatcatacagcagttct 17763
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      tcgtcggcggcggcgactct 102
               ||||||||||||||||||||
Sbjct: 6118890 tcgtcggcggcggcgactct 6118871



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      cagcctcgtcggcggcggcg 97
               ||||||||||||||||||||
Sbjct: 5759825 cagcctcgtcggcggcggcg 5759844
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgtcggcggcggcgactct 102
                ||||||||||||||||||||
Sbjct: 10403443 tcgtcggcggcggcgactct 10403462
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgtcggcggcggcgactct 102
                ||||||||||||||||||||
Sbjct: 18006063 tcgtcggcggcggcgactct 18006082
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       tcgtcggcggcggcgactct 102
                ||||||||||||||||||||
Sbjct: 13362641 tcgtcggcggcggcgactct 13362622



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       tcgtcggcggcggcgactct 102
                ||||||||||||||||||||
Sbjct: 11333346 tcgtcggcggcggcgactct 11333327
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       gcctcgtcggcggcggcgac 99
                ||||||||||||||||||||
Sbjct: 19297161 gcctcgtcggcggcggcgac 19297180
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 25       ttcctcggcgacggcggcgt 44
                ||||||||||||||||||||
Sbjct: 30731168 ttcctcggcgacggcggcgt 30731187
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>emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003A12,
             complete sequence
          Length = 164425

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    cagcctcgtcggcggcggcg 97
             ||||||||||||||||||||
Sbjct: 54811 cagcctcgtcggcggcggcg 54830
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>emb|AL731580.3|OSJN00227 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0001M07,
              complete sequence
          Length = 114335

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     cagcctcgtcggcggcggcg 97
              ||||||||||||||||||||
Sbjct: 103630 cagcctcgtcggcggcggcg 103649
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>gb|AC068490.4| Homo sapiens BAC clone RP11-789K7 from 2, complete sequence
          Length = 156900

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    aataaacaaaagaaagcaac 385
              ||||||||||||||||||||
Sbjct: 144146 aataaacaaaagaaagcaac 144127
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>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    cggcgacggcggcgtcagcgtcga 53
             |||||||||||||||| |||||||
Sbjct: 16939 cggcgacggcggcgtcggcgtcga 16916
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>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0487D09
          Length = 161531

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ttcctcggcgacggcggcgt 44
             ||||||||||||||||||||
Sbjct: 71315 ttcctcggcgacggcggcgt 71334
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      gcctcgtcggcggcggcgac 99
               ||||||||||||||||||||
Sbjct: 7097246 gcctcgtcggcggcggcgac 7097227
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>dbj|AP007273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0035K09
          Length = 124866

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgtcggcggcggcgactct 102
            ||||||||||||||||||||
Sbjct: 7424 tcgtcggcggcggcgactct 7405



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgtcggcggcggcgactct 102
            ||||||||||||||||||||
Sbjct: 2736 tcgtcggcggcggcgactct 2717
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>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1123_B01
          Length = 105736

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tcgtcggcggcggcgactct 102
             ||||||||||||||||||||
Sbjct: 77079 tcgtcggcggcggcgactct 77060
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>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tcgtcggcggcggcgactct 102
             ||||||||||||||||||||
Sbjct: 33857 tcgtcggcggcggcgactct 33838
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>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0013H03
          Length = 152998

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgtcggcggcggcgactct 102
             ||||||||||||||||||||
Sbjct: 91098 tcgtcggcggcggcgactct 91117
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>dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, compete genome
          Length = 18978

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  aatgctattgaggtggcagagccc 333
            |||| |||||||||||||||||||
Sbjct: 2745 aatggtattgaggtggcagagccc 2768
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>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgtcggcggcggcgactct 102
             ||||||||||||||||||||
Sbjct: 30257 tcgtcggcggcggcgactct 30276
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>gb|AC090656.42| Mus musculus strain C57BL/6J chromosome 17 clone rp23-407i10, complete
              sequence
          Length = 216932

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 357    cagcaatagaataaacaaaagaaa 380
              |||||||| |||||||||||||||
Sbjct: 144394 cagcaataaaataaacaaaagaaa 144417
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 24      gttcctcggcgacggcggcg 43
               ||||||||||||||||||||
Sbjct: 1540596 gttcctcggcgacggcggcg 1540577
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgtcggcggcggcgactct 102
                ||||||||||||||||||||
Sbjct: 10474987 tcgtcggcggcggcgactct 10475006
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>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20,
             complete sequence
          Length = 147108

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tcgtcggcggcggcgactct 102
             ||||||||||||||||||||
Sbjct: 14675 tcgtcggcggcggcgactct 14656
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>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1090H08
          Length = 200720

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   tcgtcggcggcggcgactct 102
            ||||||||||||||||||||
Sbjct: 9859 tcgtcggcggcggcgactct 9878


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,190,142
Number of Sequences: 3902068
Number of extensions: 5190142
Number of successful extensions: 123055
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121470
Number of HSP's gapped (non-prelim): 1585
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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