| Clone Name | bags38c14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 919 Score = 448 bits (226), Expect = e-123 Identities = 370/416 (88%), Gaps = 4/416 (0%) Strand = Plus / Plus Query: 1 gccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccggtcgg 60 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || || Sbjct: 309 gccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctggaagg 368 Query: 61 tatatatacacgcagaggctgaaagacgccaatgtcaatgatcangatcattttgaacaa 120 ||||||||||||||||||||||||| |||||||||||||||||| ||| || || ||||| Sbjct: 369 tatatatacacgcagaggctgaaaggcgccaatgtcaatgatca-gataatattaaacaa 427 Query: 121 ggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgaccaatgc 180 |||| |||| || |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 428 ggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgaccaatgc 487 Query: 181 tgctgttcatgcaattgttgaagaacagggactggacgataaagtgattgttttcaagtt 240 ||||||||||||| | ||||| |||||||||| ||| ||||||||||| || ||||| | Sbjct: 488 tgctgttcatgcagtggttgaggaacagggacgggatgataaagtgatagtcttcaaata 547 Query: 241 caagaagaagaagaagtaccagaggaaagctggtcacagacagccaaatacgaggttaag 300 ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| Sbjct: 548 taagaagaagaagaagtaccagaggaaacttggtcacagacagccaaacacaaggttaag 607 Query: 301 aattaccggcataagtggatatgaggaataccctgctgatccaatactt---caagttcc 357 ||||||||||||||||||||| ||||| | ||||||||| || |||||| | ||||| Sbjct: 608 aattaccggcataagtggatacgaggacttccctgctgacccgatacttgagtatgttcc 667 Query: 358 agcttaagtgtaattgtaagttgtttagttacaaatgattggtagtacattagaat 413 |||||||| | ||||||||||| | |||||||||| | ||||||||||||||||| Sbjct: 668 agcttaagagcaattgtaagttctgtagttacaaacaactggtagtacattagaat 723
>ref|XM_506768.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060K08.25 mRNA Length = 940 Score = 448 bits (226), Expect = e-123 Identities = 370/416 (88%), Gaps = 4/416 (0%) Strand = Plus / Plus Query: 1 gccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccggtcgg 60 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || || Sbjct: 330 gccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctggaagg 389 Query: 61 tatatatacacgcagaggctgaaagacgccaatgtcaatgatcangatcattttgaacaa 120 ||||||||||||||||||||||||| |||||||||||||||||| ||| || || ||||| Sbjct: 390 tatatatacacgcagaggctgaaaggcgccaatgtcaatgatca-gataatattaaacaa 448 Query: 121 ggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgaccaatgc 180 |||| |||| || |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 449 ggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgaccaatgc 508 Query: 181 tgctgttcatgcaattgttgaagaacagggactggacgataaagtgattgttttcaagtt 240 ||||||||||||| | ||||| |||||||||| ||| ||||||||||| || ||||| | Sbjct: 509 tgctgttcatgcagtggttgaggaacagggacgggatgataaagtgatagtcttcaaata 568 Query: 241 caagaagaagaagaagtaccagaggaaagctggtcacagacagccaaatacgaggttaag 300 ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| Sbjct: 569 taagaagaagaagaagtaccagaggaaacttggtcacagacagccaaacacaaggttaag 628 Query: 301 aattaccggcataagtggatatgaggaataccctgctgatccaatactt---caagttcc 357 ||||||||||||||||||||| ||||| | ||||||||| || |||||| | ||||| Sbjct: 629 aattaccggcataagtggatacgaggacttccctgctgacccgatacttgagtatgttcc 688 Query: 358 agcttaagtgtaattgtaagttgtttagttacaaatgattggtagtacattagaat 413 |||||||| | ||||||||||| | |||||||||| | ||||||||||||||||| Sbjct: 689 agcttaagagcaattgtaagttctgtagttacaaacaactggtagtacattagaat 744
>dbj|AK104384.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D06, full insert sequence Length = 919 Score = 448 bits (226), Expect = e-123 Identities = 370/416 (88%), Gaps = 4/416 (0%) Strand = Plus / Plus Query: 1 gccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccggtcgg 60 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || || Sbjct: 309 gccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctggaagg 368 Query: 61 tatatatacacgcagaggctgaaagacgccaatgtcaatgatcangatcattttgaacaa 120 ||||||||||||||||||||||||| |||||||||||||||||| ||| || || ||||| Sbjct: 369 tatatatacacgcagaggctgaaaggcgccaatgtcaatgatca-gataatattaaacaa 427 Query: 121 ggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgaccaatgc 180 |||| |||| || |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 428 ggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgaccaatgc 487 Query: 181 tgctgttcatgcaattgttgaagaacagggactggacgataaagtgattgttttcaagtt 240 ||||||||||||| | ||||| |||||||||| ||| ||||||||||| || ||||| | Sbjct: 488 tgctgttcatgcagtggttgaggaacagggacgggatgataaagtgatagtcttcaaata 547 Query: 241 caagaagaagaagaagtaccagaggaaagctggtcacagacagccaaatacgaggttaag 300 ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| Sbjct: 548 taagaagaagaagaagtaccagaggaaacttggtcacagacagccaaacacaaggttaag 607 Query: 301 aattaccggcataagtggatatgaggaataccctgctgatccaatactt---caagttcc 357 ||||||||||||||||||||| ||||| | ||||||||| || |||||| | ||||| Sbjct: 608 aattaccggcataagtggatacgaggacttccctgctgacccgatacttgagtatgttcc 667 Query: 358 agcttaagtgtaattgtaagttgtttagttacaaatgattggtagtacattagaat 413 |||||||| | ||||||||||| | |||||||||| | ||||||||||||||||| Sbjct: 668 agcttaagagcaattgtaagttctgtagttacaaacaactggtagtacattagaat 723
>dbj|AK064863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I04, full insert sequence Length = 940 Score = 448 bits (226), Expect = e-123 Identities = 370/416 (88%), Gaps = 4/416 (0%) Strand = Plus / Plus Query: 1 gccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccggtcgg 60 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || || Sbjct: 330 gccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctggaagg 389 Query: 61 tatatatacacgcagaggctgaaagacgccaatgtcaatgatcangatcattttgaacaa 120 ||||||||||||||||||||||||| |||||||||||||||||| ||| || || ||||| Sbjct: 390 tatatatacacgcagaggctgaaaggcgccaatgtcaatgatca-gataatattaaacaa 448 Query: 121 ggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgaccaatgc 180 |||| |||| || |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 449 ggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgaccaatgc 508 Query: 181 tgctgttcatgcaattgttgaagaacagggactggacgataaagtgattgttttcaagtt 240 ||||||||||||| | ||||| |||||||||| ||| ||||||||||| || ||||| | Sbjct: 509 tgctgttcatgcagtggttgaggaacagggacgggatgataaagtgatagtcttcaaata 568 Query: 241 caagaagaagaagaagtaccagaggaaagctggtcacagacagccaaatacgaggttaag 300 ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| Sbjct: 569 taagaagaagaagaagtaccagaggaaacttggtcacagacagccaaacacaaggttaag 628 Query: 301 aattaccggcataagtggatatgaggaataccctgctgatccaatactt---caagttcc 357 ||||||||||||||||||||| ||||| | ||||||||| || |||||| | ||||| Sbjct: 629 aattaccggcataagtggatacgaggacttccctgctgacccgatacttgagtatgttcc 688 Query: 358 agcttaagtgtaattgtaagttgtttagttacaaatgattggtagtacattagaat 413 |||||||| | ||||||||||| | |||||||||| | ||||||||||||||||| Sbjct: 689 agcttaagagcaattgtaagttctgtagttacaaacaactggtagtacattagaat 744
>gb|AY104304.1| Zea mays PCO077438 mRNA sequence Length = 963 Score = 391 bits (197), Expect = e-105 Identities = 312/349 (89%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 1 gccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccggtcgg 60 |||||||||||||| |||||||||||||| || |||||||||||||||||||| || || Sbjct: 336 gccgacatcttcgctgttgtcatgattggttcaagacaatacattgtgatgccgggcagg 395 Query: 61 tatatatacacgcagaggctgaaagacgccaatgtcaatgatcangatcattttgaacaa 120 ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 396 tatatatacacacagagactgaaaggtgccaatgtcaatgatca-gatcatattaaacaa 454 Query: 121 ggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgaccaatgc 180 ||| ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 455 ggtgctactggtgtcaactagagaaaaagcttacattgggatgccagtggtgaccaatgc 514 Query: 181 tgctgttcatgcaattgttgaagaacagggactggacgataaagtgattgttttcaagtt 240 ||||||||| ||| | |||||||||||||||| ||| |||||||| || || ||||||| Sbjct: 515 tgctgttcacgcagtggttgaagaacagggacgggatgataaagttatagtgttcaagta 574 Query: 241 caagaagaagaagaagtaccagaggaaagctggtcacagacagccaaatacgaggttaag 300 |||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| Sbjct: 575 caagaagaagaagaagtaccagaggaaacttggtcacagacagccaaacacaaggttaag 634 Query: 301 aattaccggcataagtggatatgaggaataccctgctgatccaatactt 349 ||| || |||||||||||||| || || ||||||||||| ||||||||| Sbjct: 635 aatcacaggcataagtggatacgaagagtaccctgctgacccaatactt 683
>dbj|AK062182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D10, full insert sequence Length = 543 Score = 295 bits (149), Expect = 6e-77 Identities = 250/283 (88%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 134 tcaactagagacaaagcttatattggcatgccagtggtgaccaatgctgctgttcatgca 193 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3 tcaactagagacaaggcttacattggcatgccagtggtgaccaatgctgctgttcatgca 62 Query: 194 attgttgaagaacagggactggacgataaagtgattgttttcaagttcaagaagaagaag 253 | ||||| |||||||||| ||| ||||||||||| || ||||| | |||||||||||| Sbjct: 63 gtggttgaggaacagggacgggatgataaagtgatagtcttcaaatataagaagaagaag 122 Query: 254 aagtaccagaggaaagctggtcacagacagccaaatacgaggttaagaattaccggcata 313 ||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| Sbjct: 123 aagtaccagaggaaacttggtcacagacagccaaacacaaggttaagaattaccggcata 182 Query: 314 agtggatatgaggaataccctgctgatccaatactt---caagttccagcttaagtgtaa 370 |||||||| ||||| | ||||||||| || |||||| | ||||||||||||| | || Sbjct: 183 agtggatacgaggacttccctgctgacccgatacttgagtatgttccagcttaagagcaa 242 Query: 371 ttgtaagttgtttagttacaaatgattggtagtacattagaat 413 ||||||||| | |||||||||| | ||||||||||||||||| Sbjct: 243 ttgtaagttctgtagttacaaacaactggtagtacattagaat 285
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 5e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 116 aacaaggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgacc 175 ||||||||| |||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 9005123 aacaaggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgacc 9005064 Query: 176 aatgctgctgttcatgcaattgttgaagaacagg 209 |||||||||||||||||| | ||||| ||||||| Sbjct: 9005063 aatgctgctgttcatgcagtggttgaggaacagg 9005030 Score = 115 bits (58), Expect = 1e-22 Identities = 117/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 281 cagccaaatacgaggttaagaattaccggcataagtggatatgaggaataccctgctgat 340 |||||||| || ||||||||||||||||||||||||||||| ||||| | ||||||||| Sbjct: 9004756 cagccaaacacaaggttaagaattaccggcataagtggatacgaggacttccctgctgac 9004697 Query: 341 ccaatactt---caagttccagcttaagtgtaattgtaagttgtttagttacaaatgatt 397 || |||||| | ||||||||||||| | ||||||||||| | |||||||||| | | Sbjct: 9004696 ccgatacttgagtatgttccagcttaagagcaattgtaagttctgtagttacaaacaact 9004637 Query: 398 ggtagtacattagaat 413 |||||||||||||||| Sbjct: 9004636 ggtagtacattagaat 9004621 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 24 gattgggtccagacaatacattgtgatgcccggtcggtatatatacacgcagaggctgaa 83 ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 9005762 gattgggtcgagacagtacattgtgatgcctggaaggtatatatacacgcagaggctgaa 9005703 Query: 84 agacgccaatgtcaatgatca 104 || |||||||||||||||||| Sbjct: 9005702 aggcgccaatgtcaatgatca 9005682 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 206 cagggactggacgataaagtgattgttttcaagttcaagaagaagaagaagtaccagagg 265 ||||||| ||| ||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 9004950 cagggacgggatgataaagtgatagtcttcaaatataagaagaagaagaagtaccagagg 9004891 Query: 266 aaagctggtcacagacag 283 ||| ||||||||||||| Sbjct: 9004890 aaacttggtcacagacag 9004873 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1 gccgacatcttcgccgttgtcatg 24 |||||||||||||||||||||||| Sbjct: 9006256 gccgacatcttcgccgttgtcatg 9006233
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 123 bits (62), Expect = 5e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 116 aacaaggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgacc 175 ||||||||| |||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 45569 aacaaggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgacc 45510 Query: 176 aatgctgctgttcatgcaattgttgaagaacagg 209 |||||||||||||||||| | ||||| ||||||| Sbjct: 45509 aatgctgctgttcatgcagtggttgaggaacagg 45476 Score = 115 bits (58), Expect = 1e-22 Identities = 117/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 281 cagccaaatacgaggttaagaattaccggcataagtggatatgaggaataccctgctgat 340 |||||||| || ||||||||||||||||||||||||||||| ||||| | ||||||||| Sbjct: 45202 cagccaaacacaaggttaagaattaccggcataagtggatacgaggacttccctgctgac 45143 Query: 341 ccaatactt---caagttccagcttaagtgtaattgtaagttgtttagttacaaatgatt 397 || |||||| | ||||||||||||| | ||||||||||| | |||||||||| | | Sbjct: 45142 ccgatacttgagtatgttccagcttaagagcaattgtaagttctgtagttacaaacaact 45083 Query: 398 ggtagtacattagaat 413 |||||||||||||||| Sbjct: 45082 ggtagtacattagaat 45067 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 24 gattgggtccagacaatacattgtgatgcccggtcggtatatatacacgcagaggctgaa 83 ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 46208 gattgggtcgagacagtacattgtgatgcctggaaggtatatatacacgcagaggctgaa 46149 Query: 84 agacgccaatgtcaatgatca 104 || |||||||||||||||||| Sbjct: 46148 aggcgccaatgtcaatgatca 46128 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 206 cagggactggacgataaagtgattgttttcaagttcaagaagaagaagaagtaccagagg 265 ||||||| ||| ||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 45396 cagggacgggatgataaagtgatagtcttcaaatataagaagaagaagaagtaccagagg 45337 Query: 266 aaagctggtcacagacag 283 ||| ||||||||||||| Sbjct: 45336 aaacttggtcacagacag 45319 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1 gccgacatcttcgccgttgtcatg 24 |||||||||||||||||||||||| Sbjct: 46702 gccgacatcttcgccgttgtcatg 46679
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 123 bits (62), Expect = 5e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 116 aacaaggtactactagtgtcaactagagacaaagcttatattggcatgccagtggtgacc 175 ||||||||| |||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 77732 aacaaggtattactggtatcaactagagacaaggcttacattggcatgccagtggtgacc 77673 Query: 176 aatgctgctgttcatgcaattgttgaagaacagg 209 |||||||||||||||||| | ||||| ||||||| Sbjct: 77672 aatgctgctgttcatgcagtggttgaggaacagg 77639 Score = 115 bits (58), Expect = 1e-22 Identities = 117/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 281 cagccaaatacgaggttaagaattaccggcataagtggatatgaggaataccctgctgat 340 |||||||| || ||||||||||||||||||||||||||||| ||||| | ||||||||| Sbjct: 77365 cagccaaacacaaggttaagaattaccggcataagtggatacgaggacttccctgctgac 77306 Query: 341 ccaatactt---caagttccagcttaagtgtaattgtaagttgtttagttacaaatgatt 397 || |||||| | ||||||||||||| | ||||||||||| | |||||||||| | | Sbjct: 77305 ccgatacttgagtatgttccagcttaagagcaattgtaagttctgtagttacaaacaact 77246 Query: 398 ggtagtacattagaat 413 |||||||||||||||| Sbjct: 77245 ggtagtacattagaat 77230 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 24 gattgggtccagacaatacattgtgatgcccggtcggtatatatacacgcagaggctgaa 83 ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 78371 gattgggtcgagacagtacattgtgatgcctggaaggtatatatacacgcagaggctgaa 78312 Query: 84 agacgccaatgtcaatgatca 104 || |||||||||||||||||| Sbjct: 78311 aggcgccaatgtcaatgatca 78291 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 206 cagggactggacgataaagtgattgttttcaagttcaagaagaagaagaagtaccagagg 265 ||||||| ||| ||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 77559 cagggacgggatgataaagtgatagtcttcaaatataagaagaagaagaagtaccagagg 77500 Query: 266 aaagctggtcacagacag 283 ||| ||||||||||||| Sbjct: 77499 aaacttggtcacagacag 77482 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1 gccgacatcttcgccgttgtcatg 24 |||||||||||||||||||||||| Sbjct: 78865 gccgacatcttcgccgttgtcatg 78842
>ref|XM_714571.1| Candida albicans SC5314 hypothetical protein (CaO19_9641), mRNA Length = 3261 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 363 aagtgtaattgtaagttgtttagttacaaat 393 |||||||||| ||||||||||||||||||| Sbjct: 1869 aagtgtaatttgaagttgtttagttacaaat 1839
>ref|XM_714447.1| Candida albicans SC5314 hypothetical protein (CaO19_2094), mRNA Length = 3261 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 363 aagtgtaattgtaagttgtttagttacaaat 393 |||||||||| ||||||||||||||||||| Sbjct: 1869 aagtgtaatttgaagttgtttagttacaaat 1839
>ref|NM_103272.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT1G35680 mRNA, complete cds Length = 859 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 ggtcacagacagccaaatacgaggttaagaattaccgg 309 |||||||||||||| ||||||||| | || |||||||| Sbjct: 586 ggtcacagacagccgaatacgaggattaggattaccgg 623
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaagtaccag 262 |||||||||||||| ||||||||||| Sbjct: 1033083 agttcaagaagaagcagaagtaccag 1033108
>ref|XM_714679.1| Candida albicans SC5314 hypothetical protein (CaO19_14085), mRNA Length = 1098 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 aagaagaagaagaagtaccagaggaa 267 ||||||||||||||| |||||||||| Sbjct: 413 aagaagaagaagaagaaccagaggaa 438
>ref|XM_714796.1| Candida albicans SC5314 hypothetical protein (CaO19_6793), mRNA Length = 1098 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 aagaagaagaagaagtaccagaggaa 267 ||||||||||||||| |||||||||| Sbjct: 413 aagaagaagaagaagaaccagaggaa 438
>ref|XM_838259.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1176) partial mRNA Length = 1488 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaagtaccag 262 |||||||||||||| ||||||||||| Sbjct: 368 agttcaagaagaagcagaagtaccag 393
>gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete sequence Length = 123357 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 242 aagaagaagaagaagtaccagaggaa 267 ||||||||||||||| |||||||||| Sbjct: 48513 aagaagaagaagaagaaccagaggaa 48488
>gb|AY116944.1| Arabidopsis thaliana At1g35680/F15O4_7 mRNA, complete cds Length = 663 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 ggtcacagacagccaaatacgaggttaagaattaccgg 309 |||||||||||||| ||||||||| | || |||||||| Sbjct: 562 ggtcacagacagccgaatacgaggattaggattaccgg 599
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence Length = 139476 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaagtaccag 262 |||||||||||||||||||| ||||| Sbjct: 56785 agttcaagaagaagaagaagaaccag 56810
>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence Length = 174831 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaagtaccag 262 |||||||||||||||||||| ||||| Sbjct: 7796 agttcaagaagaagaagaagaaccag 7821
>gb|AY058118.1| Arabidopsis thaliana At1g35680/F15O4_7 mRNA, complete cds Length = 801 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 ggtcacagacagccaaatacgaggttaagaattaccgg 309 |||||||||||||| ||||||||| | || |||||||| Sbjct: 586 ggtcacagacagccgaatacgaggattaggattaccgg 623
>gb|AF428363.1|AF428363 Arabidopsis thaliana At1g35680/F15O4_7 mRNA, complete cds Length = 835 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 ggtcacagacagccaaatacgaggttaagaattaccgg 309 |||||||||||||| ||||||||| | || |||||||| Sbjct: 586 ggtcacagacagccgaatacgaggattaggattaccgg 623
>emb|BX815055.1|CNS0ABFB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 818 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 ggtcacagacagccaaatacgaggttaagaattaccgg 309 |||||||||||||| ||||||||| | || |||||||| Sbjct: 572 ggtcacagacagccgaatacgaggattaggattaccgg 609
>dbj|AB154357.1| Hordeum bulbosum GBSSI gene for granule bound starch synthase I, complete cds Length = 5275 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 caagttcaagaagaagaagaag 256 |||||||||||||||||||||| Sbjct: 896 caagttcaagaagaagaagaag 917
>emb|Z49787.1|ATRPL21MR A.thaliana rpl21 mRNA for chloroplast ribosomal large subunit protein L21 Length = 850 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 ggtcacagacagccaaatacgaggttaagaattaccgg 309 |||||||||||||| ||||||||| | || |||||||| Sbjct: 585 ggtcacagacagccgaatacgaggattaggattaccgg 622
>ref|XM_639843.1| Dictyostelium discoideum Ras GTPase (DDB0229437), partial mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaagtacca 261 |||| |||||||||||||||||||| Sbjct: 363 agttaaagaagaagaagaagtacca 387
>gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome 13, complete sequence Length = 190884 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 ttgtaagttgtttagttacaaatga 395 ||||||||||||||||||| ||||| Sbjct: 175959 ttgtaagttgtttagttactaatga 175983
>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence Length = 228842 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 96800 aagttcaagaagaagaagaag 96820
>ref|XM_706653.1| Candida albicans SC5314 putative protein kinase (CaO19.10297), mRNA Length = 2517 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 aagaagaagaagaagtaccag 262 ||||||||||||||||||||| Sbjct: 1310 aagaagaagaagaagtaccag 1330
>ref|XM_706631.1| Candida albicans SC5314 putative protein kinase (CaO19.2781), mRNA Length = 2517 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 aagaagaagaagaagtaccag 262 ||||||||||||||||||||| Sbjct: 1310 aagaagaagaagaagtaccag 1330
>emb|BX927105.10| Zebrafish DNA sequence from clone DKEY-40F3 in linkage group 23, complete sequence Length = 52600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 taagttgtttagttacaaatg 394 ||||||||||||||||||||| Sbjct: 9949 taagttgtttagttacaaatg 9969
>gb|AC108943.4| Mus musculus BAC clone RP23-66D23 from chromosome 18, complete sequence Length = 191642 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 aagttgtttagttacaaatga 395 ||||||||||||||||||||| Sbjct: 172122 aagttgtttagttacaaatga 172142
>emb|Z46241.2|CEC38D4 Caenorhabditis elegans Cosmid C38D4, complete sequence Length = 32776 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 9117 aagttcaagaagaagaagaag 9137
>ref|XM_644173.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (325.t00009) partial mRNA Length = 1383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 551 aagttcaagaagaagaagaag 571
>ref|XM_644179.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (325.t00010) partial mRNA Length = 1383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 551 aagttcaagaagaagaagaag 571
>emb|AL078630.1|MM573K1 Mouse DNA sequence from clone CT7-BM573K1 on chromosome 17 Contains the gene for gamma-aminobutyric acid (GABA) B receptor 1, five genes for novel 7 transmembrane receptor (rhodopsin family) (olfactory receptor LIKE) proteins, the gene for a novel Ulp1 protease family member, a Ulp1 protease family pseudogene, a novel pseudogene, a Von Hippel-Lindau disease tumor suppressor (VHL) pseudogene, a 7 transmembrane receptor (rhodopsin family) (olfactory receptor LIKE) pseudogene, the gene for diubiquitin and three CpG islands, complete sequence Length = 154614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 13188 aagttcaagaagaagaagaag 13168
>emb|BX927176.8| Zebrafish DNA sequence from clone DKEY-24E16 in linkage group 23, complete sequence Length = 81744 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 taagttgtttagttacaaatg 394 ||||||||||||||||||||| Sbjct: 9949 taagttgtttagttacaaatg 9969
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 tagtgtcaactagagacaaagctta 153 |||||||| |||||||||||||||| Sbjct: 20288 tagtgtcacctagagacaaagctta 20264
>gb|AC157978.25| Medicago truncatula clone mth2-47l16, complete sequence Length = 125021 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 120655 aagttcaagaagaagaagaag 120635
>ref|NM_065586.3| Caenorhabditis elegans C38D4.3 (C38D4.3) mRNA, complete cds Length = 5452 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 4695 aagttcaagaagaagaagaag 4715
>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence Length = 165319 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 115675 aagttcaagaagaagaagaag 115655
>gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 from the MHC region, complete sequence Length = 153869 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 aagttcaagaagaagaagaag 256 ||||||||||||||||||||| Sbjct: 131234 aagttcaagaagaagaagaag 131214
>emb|BX465842.5| Zebrafish DNA sequence from clone DKEY-164P3 in linkage group 3, complete sequence Length = 194224 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 taagttgtttagttacaaatg 394 ||||||||||||||||||||| Sbjct: 61299 taagttgtttagttacaaatg 61319
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 agttcaagaagaagaagaagtacca 261 |||| |||||||||||||||||||| Sbjct: 10703 agttaaagaagaagaagaagtacca 10679
>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence Length = 44117 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 caagaagaagaagaagtaccagaggaaag 269 |||||||||||||||| | |||||||||| Sbjct: 24693 caagaagaagaagaagaatcagaggaaag 24721
>emb|AL110504.6|CNS01DRB Human chromosome 14 DNA sequence BAC R-688G15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 207117 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 aagaagaagaagaagtaccagagga 266 ||||||||||||||| ||||||||| Sbjct: 118054 aagaagaagaagaagaaccagagga 118078
>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence Length = 209934 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ttgtaagttgtttagttacaaatga 395 ||||||||||||||||||| ||||| Sbjct: 192159 ttgtaagttgtttagttactaatga 192135
>gb|AC108424.14| Mus musculus chromosome 7, clone RP23-105A10, complete sequence Length = 198191 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagttcaagaagaagaagaa 255 |||||||||||||||||||| Sbjct: 76525 aagttcaagaagaagaagaa 76506
>ref|NM_119728.2| Arabidopsis thaliana PSAT; phosphoserine transaminase/ transaminase AT4G35630 (PSAT) mRNA, complete cds Length = 1664 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 1144 agaagaagaaccagaggaaagctg 1167
>ref|NM_119729.3| Arabidopsis thaliana ATSERAT3;2; acetyltransferase/ serine O-acetyltransferase AT4G35640 (ATSERAT3;2) mRNA, complete cds Length = 2251 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 2001 agaagaagaaccagaggaaagctg 1978
>ref|NM_125623.2| Arabidopsis thaliana ion channel AT5G62290 mRNA, complete cds Length = 930 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 534 agttcaagaagaagaagaag 553
>ref|NM_112374.2| Arabidopsis thaliana unknown protein AT3G15115 mRNA, complete cds Length = 1384 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 caagttcaagaagaagaagaagta 258 |||||| ||||||||||||||||| Sbjct: 304 caagttgaagaagaagaagaagta 281
>ref|NM_119171.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G30250 mRNA, complete cds Length = 1539 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaagaagaagaagaagtaccagaggaa 267 ||||||||||||||||| | |||||||| Sbjct: 1413 tcaagaagaagaagaagaagcagaggaa 1440
>ref|NM_127317.2| Arabidopsis thaliana phosphoserine transaminase/ transaminase AT2G17630 mRNA, complete cds Length = 1472 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 1026 agaagaagaaccagaggaaagctg 1049
>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete sequence Length = 271546 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaa 255 |||||||||||||||||||| Sbjct: 186598 aagttcaagaagaagaagaa 186617 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaa 255 |||||||||||||||||||| Sbjct: 186472 aagttcaagaagaagaagaa 186491
>gb|AY785069.1| Bicyclus anynana clone BA-CA5 microsatellite sequence Length = 609 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ttcaagttcaagaagaagaagaag 256 ||||||| |||||||||||||||| Sbjct: 585 ttcaagtacaagaagaagaagaag 562
>gb|AE012983.1| Thermoanaerobacter tengcongensis MB4, section 10 of 244 of the complete genome Length = 14517 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gacaaagcttatattggcat 162 |||||||||||||||||||| Sbjct: 3972 gacaaagcttatattggcat 3991
>gb|AF202180.3| Plasmodium falciparum erythrocyte membrane-associated giant protein antigen 332 gene, complete cds Length = 16377 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaa 255 |||||||||||||||||||| Sbjct: 1223 aagttcaagaagaagaagaa 1242 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagttcaagaagaagaagaa 255 |||||||||||||||||||| Sbjct: 1097 aagttcaagaagaagaagaa 1116
>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence Length = 214625 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aagaagaagaagaagtacca 261 |||||||||||||||||||| Sbjct: 211251 aagaagaagaagaagtacca 211232
>ref|XM_808789.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511553.140) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 caagaagaagaagaagtacc 260 |||||||||||||||||||| Sbjct: 358 caagaagaagaagaagtacc 377
>gb|AC123853.2| Mus musculus BAC clone RP23-326J1 from chromosome 19, complete sequence Length = 205768 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttgaacaaggtactactagt 132 |||||||||||||||||||| Sbjct: 78877 ttgaacaaggtactactagt 78858
>gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence Length = 165116 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 ttaagtgtaattgtaagttgttta 384 |||||||||||| ||||||||||| Sbjct: 122883 ttaagtgtaattttaagttgttta 122860
>gb|AC115768.9| Mus musculus chromosome 19, clone RP23-107E10, complete sequence Length = 212161 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 attgttgaagaacagggact 213 |||||||||||||||||||| Sbjct: 124684 attgttgaagaacagggact 124665
>gb|AC101848.8| Mus musculus chromosome 1, clone RP23-267J24, complete sequence Length = 218654 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aagaagaagaagaagtacca 261 |||||||||||||||||||| Sbjct: 49276 aagaagaagaagaagtacca 49257
>gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete sequence Length = 142834 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 71013 agttcaagaagaagaagaag 71032
>emb|AL159999.15| Human DNA sequence from clone RP11-8I8 on chromosome 9 Contains a phosphoribosylaminoimidazole carboxylase (PAICS) pseudogene and the 3' end of one variant of the ROR2 gene for receptor tyrosine kinase-like orphan receptor 2, complete sequence Length = 99959 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 agaagaagaagaagtaccagagga 266 |||||||||||||||| ||||||| Sbjct: 95558 agaagaagaagaagtagcagagga 95581
>ref|XM_965573.1| PREDICTED: Tribolium castaneum similar to CG7368-PA (LOC659248), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 caagaagaagaagaagtaccagaggaaa 268 ||||||||||||||||||| ||| |||| Sbjct: 834 caagaagaagaagaagtacaagaagaaa 861
>gb|AC154509.2| Mus musculus BAC clone RP23-207P21 from chromosome 16, complete sequence Length = 203692 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 aagaagaagaagaagtacca 261 |||||||||||||||||||| Sbjct: 67369 aagaagaagaagaagtacca 67388
>emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome 4, BAC clone F9N11 Length = 87635 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 tcaagaagaagaagaagtaccagaggaa 267 ||||||||||||||||| | |||||||| Sbjct: 78018 tcaagaagaagaagaagaagcagaggaa 77991
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 169820 agaagaagaaccagaggaaagctg 169843
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 tcaagaagaagaagaagtaccagaggaa 267 ||||||||||||||||| | |||||||| Sbjct: 151039 tcaagaagaagaagaagaagcagaggaa 151012
>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII project) Length = 94315 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 49060 agaagaagaaccagaggaaagctg 49083
>emb|AJ440777.1|XLA440777 Xenopus laevis mRNA for Fast-3 protein Length = 1236 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 caagaagaagaagaagtaccagag 264 ||||||||||||||| |||||||| Sbjct: 206 caagaagaagaagaactaccagag 229
>emb|AL691431.20| Mouse DNA sequence from clone RP23-257P7 on chromosome 4 Contains the 5' end of a novel gene (2810031P15Rik), a ribosomal protein L10 (Rpl10) pseudogene, a ribosomal protein S6 (Rps6) pseudogene and two CpG islands, complete sequence Length = 199847 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 agaagaagaagaagtaccagagga 266 |||||||||||||||| ||||||| Sbjct: 20551 agaagaagaagaagtaacagagga 20528
>gb|AY128340.1| Arabidopsis thaliana phosphoserine aminotransferase (At4g35630) mRNA, complete cds Length = 1474 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 1059 agaagaagaaccagaggaaagctg 1082
>gb|AC092124.2| Homo sapiens chromosome 16 clone RP11-1079H2, complete sequence Length = 197992 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 aggaaagctggtcacagaca 282 |||||||||||||||||||| Sbjct: 119313 aggaaagctggtcacagaca 119332
>gb|AC104626.3| Drosophila melanogaster X BAC RP98-28L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184454 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 180919 agttcaagaagaagaagaag 180938
>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3, complete sequence Length = 187734 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gctgatccaatacttcaagt 354 |||||||||||||||||||| Sbjct: 21987 gctgatccaatacttcaagt 22006
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ctggacgataaagtgattgttttc 235 |||||| ||||||||||||||||| Sbjct: 94401 ctggacaataaagtgattgttttc 94424
>gb|AC023718.4| Drosophila melanogaster X BAC RP98-7P15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164415 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 23516 agttcaagaagaagaagaag 23535
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178239 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ctggacgataaagtgattgttttc 235 |||||| ||||||||||||||||| Sbjct: 142796 ctggacaataaagtgattgttttc 142819
>ref|NM_206684.2| Drosophila melanogaster discs large 1 CG1725-RE, transcript variant E (dlg1), mRNA Length = 5952 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 78 agttcaagaagaagaagaag 97
>ref|NM_206682.2| Drosophila melanogaster discs large 1 CG1725-RG, transcript variant G (dlg1), mRNA Length = 6112 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 193 agttcaagaagaagaagaag 212
>ref|NM_167282.2| Drosophila melanogaster discs large 1 CG1725-RA, transcript variant A (dlg1), mRNA Length = 6109 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 211 agttcaagaagaagaagaag 230
>gb|AC007509.5| Arabidopsis thaliana chromosome 2 clone T19E12 map mi398, complete sequence Length = 16283 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 5811 agaagaagaaccagaggaaagctg 5788
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete sequence Length = 91863 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aagaagaagaagaagtacca 261 |||||||||||||||||||| Sbjct: 79811 aagaagaagaagaagtacca 79792
>ref|NM_078565.3| Drosophila melanogaster discs large 1 CG1725-RD, transcript variant D (dlg1), mRNA Length = 6067 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 193 agttcaagaagaagaagaag 212
>gb|AC009082.7| Homo sapiens chromosome 16 clone RP11-354N7, complete sequence Length = 160277 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 caagttcaagaagaagaaga 254 |||||||||||||||||||| Sbjct: 23511 caagttcaagaagaagaaga 23530
>gb|DQ090940.1| Homo sapiens cadherin 1, type 1, E-cadherin (epithelial) (CDH1) gene, complete cds Length = 100541 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 caagttcaagaagaagaaga 254 |||||||||||||||||||| Sbjct: 15007 caagttcaagaagaagaaga 15026
>gb|BT023418.1| Arabidopsis thaliana At2g17630 gene, complete cds Length = 1378 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 990 agaagaagaaccagaggaaagctg 1013
>gb|AC099314.3| Homo sapiens chromosome 16 clone RP11-354M1, complete sequence Length = 184945 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 caagttcaagaagaagaaga 254 |||||||||||||||||||| Sbjct: 94156 caagttcaagaagaagaaga 94175
>emb|BX833603.1|CNS09ZBI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 864 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 500 agttcaagaagaagaagaag 519
>gb|AC093911.2| Homo sapiens BAC clone RP11-765B12 from 2, complete sequence Length = 186199 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 aggaaagctggtcacagaca 282 |||||||||||||||||||| Sbjct: 168387 aggaaagctggtcacagaca 168406
>gb|BT005429.1| Arabidopsis thaliana clone U51198 unknown protein (At5g62290) mRNA, complete cds Length = 721 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 453 agttcaagaagaagaagaag 472
>gb|AC084527.1|CBRG21F09 Caenorhabditis briggsae cosmid G21F09, complete sequence Length = 40701 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 attgttttcaagttcaagaa 246 |||||||||||||||||||| Sbjct: 12570 attgttttcaagttcaagaa 12551
>gb|BT005106.1| Arabidopsis thaliana clone U50314 unknown protein (At3g15115) mRNA, complete cds Length = 1051 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 caagttcaagaagaagaagaagta 258 |||||| ||||||||||||||||| Sbjct: 167 caagttgaagaagaagaagaagta 144
>gb|AY088500.1| Arabidopsis thaliana clone 7236 mRNA, complete sequence Length = 900 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 534 agttcaagaagaagaagaag 553
>gb|AY087331.1| Arabidopsis thaliana clone 34272 mRNA, complete sequence Length = 1514 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 1055 agaagaagaaccagaggaaagctg 1078
>dbj|AP001299.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F4B12 Length = 37262 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 caagttcaagaagaagaagaagta 258 |||||| ||||||||||||||||| Sbjct: 3939 caagttgaagaagaagaagaagta 3962
>dbj|AK119007.1| Arabidopsis thaliana At5g62290 mRNA for unknown protein, complete cds, clone: RAFL21-33-M15 Length = 931 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 535 agttcaagaagaagaagaag 554
>dbj|AK117539.1| Arabidopsis thaliana At3g15110 mRNA for unknown protein, complete cds, clone: RAFL17-19-G19 Length = 1384 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 caagttcaagaagaagaagaagta 258 |||||| ||||||||||||||||| Sbjct: 304 caagttgaagaagaagaagaagta 281
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete sequence Length = 257692 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ctggacgataaagtgattgttttc 235 |||||| ||||||||||||||||| Sbjct: 153530 ctggacaataaagtgattgttttc 153553
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 20744 agttcaagaagaagaagaag 20763
>dbj|AP004468.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09A24, TM0003, complete sequence Length = 88828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aagaagaagaagaagtacca 261 |||||||||||||||||||| Sbjct: 27571 aagaagaagaagaagtacca 27552
>gb|M73529.1|DRODLGA Drosophila melanogaster discs-large tumor suppressor mRNA, complete cds Length = 3263 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agttcaagaagaagaagaag 256 |||||||||||||||||||| Sbjct: 207 agttcaagaagaagaagaag 226
>dbj|D88541.1| Arabidopsis thaliana mRNA for phosphoserine aminotransferase, complete cds Length = 1606 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 1144 agaagaagaaccagaggaaagctg 1167
>dbj|AB010408.1| Arabidopsis thaliana DNA for phosphoserine aminotransferase, complete cds Length = 6124 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 agaagaagtaccagaggaaagctg 272 |||||||| ||||||||||||||| Sbjct: 5547 agaagaagaaccagaggaaagctg 5570
>emb|AL671896.4| Mouse DNA sequence from clone RP23-354F16 on chromosome X, complete sequence Length = 78197 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gaggaaagctggtcacagac 281 |||||||||||||||||||| Sbjct: 14206 gaggaaagctggtcacagac 14187 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,203,372 Number of Sequences: 3902068 Number of extensions: 5203372 Number of successful extensions: 691487 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 690540 Number of HSP's gapped (non-prelim): 932 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)