ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags38c12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein Length = 1139 Score = 1178 bits (594), Expect = 0.0 Identities = 613/618 (99%), Gaps = 1/618 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 370 gaggaggccaaggtgtacgtcggg-aacctgccgtatgatgtcgacagcgagcggctcgc 428 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 429 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacaaagagtc 488 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 548 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 549 catcgagacgtttaaccgctacaacatcagcggaaggcttctgaacgtaaacagggcagc 608 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 tcagaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 668 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 728 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 788 Query: 428 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 848 Query: 488 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 908 Query: 548 gttctgatgcggcgcagcggcggagagcatggcttggcgtttctcgtggacacatgggaa 607 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 gttctgatgcggtgcagcggcggagagcatggcttggcgtttctcgtggacacatgggaa 968 Query: 608 cactgctgaaatgttact 625 |||||||||||||||||| Sbjct: 969 cactgctgaaatgttact 986
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 517 bits (261), Expect = e-143 Identities = 471/540 (87%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 ||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||| Sbjct: 443 gaggaggccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgc 501 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 502 ccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagac 561 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 ||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 562 agggcagagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggc 621 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 ||| |||| | |||||||||| || |||| ||||||||||||||||||||||||||| || Sbjct: 622 cattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggc 681 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || ||||||||| ||||| ||||||||||| | |||||||| || ||||||||||||| Sbjct: 682 tccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggctta 741 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||||||||||| ||| ||||||||| || ||||| ||||||||||||| Sbjct: 742 tgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagca 801 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| || || ||||| ||| || | || || || |||||| |||||||||| || ||||| Sbjct: 802 tggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatt 861 Query: 428 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 487 ||||||||| | ||||| || |||||||| || || ||||||||| || |||||||| Sbjct: 862 tggttttgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatgg 921 Query: 488 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||| |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 922 acaggaattggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 981
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2 mRNA Length = 1302 Score = 517 bits (261), Expect = e-143 Identities = 471/540 (87%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 ||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||| Sbjct: 437 gaggaggccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgc 495 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 496 ccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagac 555 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 ||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 556 agggcagagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggc 615 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 ||| |||| | |||||||||| || |||| ||||||||||||||||||||||||||| || Sbjct: 616 cattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggc 675 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || ||||||||| ||||| ||||||||||| | |||||||| || ||||||||||||| Sbjct: 676 tccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggctta 735 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||||||||||| ||| ||||||||| || ||||| ||||||||||||| Sbjct: 736 tgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagca 795 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| || || ||||| ||| || | || || || |||||| |||||||||| || ||||| Sbjct: 796 tggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatt 855 Query: 428 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 487 ||||||||| | ||||| || |||||||| || || ||||||||| || |||||||| Sbjct: 856 tggttttgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatgg 915 Query: 488 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||| |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 916 acaggaattggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 975
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 517 bits (261), Expect = e-143 Identities = 471/540 (87%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 ||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||| Sbjct: 440 gaggaggccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgc 498 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 499 ccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagac 558 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 ||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 559 agggcagagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggc 618 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 ||| |||| | |||||||||| || |||| ||||||||||||||||||||||||||| || Sbjct: 619 cattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggc 678 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || ||||||||| ||||| ||||||||||| | |||||||| || ||||||||||||| Sbjct: 679 tccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggctta 738 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||||||||||| ||| ||||||||| || ||||| ||||||||||||| Sbjct: 739 tgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagca 798 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| || || ||||| ||| || | || || || |||||| |||||||||| || ||||| Sbjct: 799 tggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatt 858 Query: 428 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 487 ||||||||| | ||||| || |||||||| || || ||||||||| || |||||||| Sbjct: 859 tggttttgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatgg 918 Query: 488 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||| |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 919 acaggaattggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 978
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 517 bits (261), Expect = e-143 Identities = 471/540 (87%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 ||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||| Sbjct: 437 gaggaggccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgc 495 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 496 ccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagac 555 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 ||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 556 agggcagagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggc 615 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 ||| |||| | |||||||||| || |||| ||||||||||||||||||||||||||| || Sbjct: 616 cattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggc 675 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || ||||||||| ||||| ||||||||||| | |||||||| || ||||||||||||| Sbjct: 676 tccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggctta 735 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||||||||||| ||| ||||||||| || ||||| ||||||||||||| Sbjct: 736 tgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagca 795 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| || || ||||| ||| || | || || || |||||| |||||||||| || ||||| Sbjct: 796 tggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatt 855 Query: 428 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 487 ||||||||| | ||||| || |||||||| || || ||||||||| || |||||||| Sbjct: 856 tggttttgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatgg 915 Query: 488 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||| |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 916 acaggaattggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 975
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 505 bits (255), Expect = e-140 Identities = 465/534 (87%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 14 gccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgcccagct 73 ||||||||||||||||| ||||||||||| || |||||||||||| | ||||||||||| Sbjct: 68 gccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgcccagct 126 Query: 74 cttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggcca 133 |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || Sbjct: 127 cttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggca 186 Query: 134 gagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcga 193 ||||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| || Sbjct: 187 gagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattga 246 Query: 194 gacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagctcaaag 253 || | |||||||||| || |||| ||||||||||||||||||||||||||| |||| ||| Sbjct: 247 gatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggctccaag 306 Query: 254 gggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggcttatgttgg 313 |||||| ||||| ||||||||||| | |||||||| || ||||||||||||||||||| Sbjct: 307 gggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggcttatgttgg 366 Query: 314 taacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatgggga 373 |||||||||||||||| ||| ||||||||| || ||||| |||||||||||||||| || Sbjct: 367 caacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagcatggaga 426 Query: 374 agtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttggttt 433 || ||||| ||| || | || || || |||||| |||||||||| || ||||||||||| Sbjct: 427 ggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatttggttt 486 Query: 434 tgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatggacagga 493 ||| | ||||| || |||||||| || || ||||||||| || |||||||||||||| Sbjct: 487 tgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatggacagga 546 Query: 494 gatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 547 attggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 600
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 505 bits (255), Expect = e-140 Identities = 465/534 (87%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 14 gccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgcccagct 73 ||||||||||||||||| ||||||||||| || |||||||||||| | ||||||||||| Sbjct: 68 gccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgcccagct 126 Query: 74 cttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggcca 133 |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || Sbjct: 127 cttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggca 186 Query: 134 gagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcga 193 ||||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| || Sbjct: 187 gagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattga 246 Query: 194 gacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagctcaaag 253 || | |||||||||| || |||| ||||||||||||||||||||||||||| |||| ||| Sbjct: 247 gatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggctccaag 306 Query: 254 gggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggcttatgttgg 313 |||||| ||||| ||||||||||| | |||||||| || ||||||||||||||||||| Sbjct: 307 gggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggcttatgttgg 366 Query: 314 taacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatgggga 373 |||||||||||||||| ||| ||||||||| || ||||| |||||||||||||||| || Sbjct: 367 caacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagcatggaga 426 Query: 374 agtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttggttt 433 || ||||| ||| || | || || || |||||| |||||||||| || ||||||||||| Sbjct: 427 ggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatttggttt 486 Query: 434 tgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatggacagga 493 ||| | ||||| || |||||||| || || ||||||||| || |||||||||||||| Sbjct: 487 tgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatggacagga 546 Query: 494 gatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 547 attggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 600
>gb|AY108263.1| Zea mays PCO100700 mRNA sequence Length = 891 Score = 357 bits (180), Expect = 3e-95 Identities = 460/552 (83%), Gaps = 1/552 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| ||||| ||| ||||| || || || |||||||||||| | ||||| Sbjct: 66 gaggaggccaaggtctacgttggg-aaccttccctacgacgtcgacagcgagggactcgc 124 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 ||| |||||||||||||||| |||||||||||||||||||| || ||||||||||| | Sbjct: 125 gcagatcttcgaccaggccggcgtcgtcgaggtcgccgaggttatctacaacagagaaac 184 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 |||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct: 185 tggccagagccgtgggtttggttttgttaccatgagcactgttgaggaagctgacaaagc 244 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 ||| |||| ||| | |||||| || || ||||| ||||||||||| |||||||||||| | Sbjct: 245 cattgagatgttcagccgctatgatattagcgggaggcttctgaatgtaaacagggcatc 304 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 | |||||| | || | || ||||||| |||| |||||| | ||||||| ||||| Sbjct: 305 ttctaggggcactcgcatggaaagacctcagagacaatttgcaccagctttcagagctta 364 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| ||| |||||||||||| || ||||||||| ||||||| ||||||||||||| Sbjct: 365 tgttggcaacttgccatggcaagttgatgactctaggctggtgcagttgttcagcgagca 424 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| ||||| ||| |||||| | | || || ||||||||||||||||| || |||||||| Sbjct: 425 tggagaagttgttgatgctaaggttgtctacgacagagaaactgggcgctcacgaggatt 484 Query: 428 tggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatgg 487 ||||||||| | |||| ||||||||||| || | ||||||||| || || ||||| Sbjct: 485 cggttttgtatcaatggtgtcaaaggaggaactcaatgatgctatttcggccctagatgg 544 Query: 488 acaggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||| |||| |||||||| || |||||||| |||||||||||| | |||||| | || Sbjct: 545 acaggaattggacggccgccctcttcgagtgaatgttgcagcagagcggccacagagggg 604 Query: 548 gttctgatgcgg 559 || |||||||| Sbjct: 605 cttttgatgcgg 616
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 228 bits (115), Expect = 2e-56 Identities = 358/438 (81%), Gaps = 1/438 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| |||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 490 gaggaggccaaggtctacgtcgg-aaacctgccctacgacgtcgacagcgagcgcctcgc 548 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | Sbjct: 549 tcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaacagagaaac 608 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 || || || ||||| ||||| ||||| || ||||| ||| ||||||| ||||| || || Sbjct: 609 agatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggctgagaaggc 668 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 | |||| ||| | ||||| || ||| ||||||||||||| ||||| | ||||| Sbjct: 669 tgtggagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaataaagcagc 728 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || || ||||| ||||| || |||||||| |||| | || ||||| |||| ||| Sbjct: 729 tcctagaggctctcgtgtggacagacctcccagacaatctgggccttctctcagaattta 788 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||| ||||||| ||| || ||||| |||||| | ||||||||||||| Sbjct: 789 tgttggcaacctgccttggcaagtggatgattctagattggtggagttgttcagcgagca 848 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| |||||||| |||| | | || |||||| ||||||||||||||||||| ||||| Sbjct: 849 tggtaaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcgcggggatt 908 Query: 428 tggttttgtaactatggc 445 ||||||||| |||||||| Sbjct: 909 tggttttgttactatggc 926
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 226 bits (114), Expect = 7e-56 Identities = 358/438 (81%), Gaps = 1/438 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| ||||||||| ||||| || || || ||||||||||||| ||||| Sbjct: 447 gaggaggccaaggtctacgtcggg-aacctaccctacgacatcgacagcgagcgcctcgc 505 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||| | Sbjct: 506 ccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaacagagaaac 565 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 || | ||| ||||||||||||||||| |||||||| || ||||||| ||||| || || Sbjct: 566 agatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggctgagaaggc 625 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 | |||| ||| | |||||||| | || |||||||||| ||||||| |||||| Sbjct: 626 tgtggagatgttccatcgctacgatgttgatgggaggcttctgactgtaaacaaggcagc 685 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || || ||| | || || || |||||||| || ||||||| ||||||||||| ||| Sbjct: 686 tcctagaggcgctcgggtggaaagacctccccgtcagtttgggccttctttcaggattta 745 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 ||| || || || || ||||||| ||| |||||||||||||| || ||||||||||||| Sbjct: 746 tgtgggcaatctcccttggcaagtggatgactctaggttggtacagctgttcagcgagca 805 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| ||||||| | || | | |||||||||||||||||||||||||| |||||||| Sbjct: 806 tggcaaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttcacgaggatt 865 Query: 428 tggttttgtaactatggc 445 |||||||||||| ||||| Sbjct: 866 tggttttgtaacaatggc 883
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 226 bits (114), Expect = 7e-56 Identities = 358/438 (81%), Gaps = 1/438 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| ||||||||| ||||| || || || ||||||||||||| ||||| Sbjct: 448 gaggaggccaaggtctacgtcggg-aacctaccctacgacatcgacagcgagcgcctcgc 506 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||| | Sbjct: 507 ccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaacagagaaac 566 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 || | ||| ||||||||||||||||| |||||||| || ||||||| ||||| || || Sbjct: 567 agatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggctgagaaggc 626 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 | |||| ||| | |||||||| | || |||||||||| ||||||| |||||| Sbjct: 627 tgtggagatgttccatcgctacgatgttgatgggaggcttctgactgtaaacaaggcagc 686 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || || ||| | || || || |||||||| || ||||||| ||||||||||| ||| Sbjct: 687 tcctagaggcgctcgggtggaaagacctccccgtcagtttgggccttctttcaggattta 746 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 ||| || || || || ||||||| ||| |||||||||||||| || ||||||||||||| Sbjct: 747 tgtgggcaatctcccttggcaagtggatgactctaggttggtacagctgttcagcgagca 806 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| ||||||| | || | | |||||||||||||||||||||||||| |||||||| Sbjct: 807 tggcaaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttcacgaggatt 866 Query: 428 tggttttgtaactatggc 445 |||||||||||| ||||| Sbjct: 867 tggttttgtaacaatggc 884
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 222 bits (112), Expect = 1e-54 Identities = 238/280 (85%) Strand = Plus / Minus Query: 213 atcagcggaaggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagaga 272 |||| ||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||| Sbjct: 27873827 atcaacggaaggcttctgaacgtaaacagggcggctccaaggggctctcgtgtggagaga 27873768 Query: 273 cctcctcgacagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcg 332 ||||| | |||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 27873767 cctccaaggcagtttgctcctgctttcagggcttatgttggcaacctgccatggcaagtg 27873708 Query: 333 gaagactctaggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatc 392 || ||||||||| || ||||| |||||||||||||||| || || ||||| ||| || | Sbjct: 27873707 gatgactctaggctgctgcaattgttcagcgagcatggagaggtggttaacgcttcggtt 27873648 Query: 393 gtgtatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggcttcaaag 452 || || || |||||| |||||||||| || |||||||||||||| | ||||| || ||| Sbjct: 27873647 gtctacgatagagaatctgggcgttctcggggatttggttttgtttccatggcctccaag 27873588 Query: 453 gaggatcttgacagtgctatttcagcgcttgatggacagg 492 ||||| || || ||||||||| || ||||||||||||| Sbjct: 27873587 gaggagctcgatgatgctatttctgcccttgatggacagg 27873548 Score = 133 bits (67), Expect = 8e-28 Identities = 94/102 (92%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 ||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||| Sbjct: 27874500 gaggaggccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgc 27874442 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 |||||||||||| |||||||| |||||||||||||||||||| Sbjct: 27874441 ccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 27874400 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 106 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 165 |||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||| Sbjct: 27874265 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 27874206 Query: 166 ctattgaggaagctgacaaagccatcgagacgtttaaccgcta 208 | ||||||||||| ||||| ||||| |||| | |||||||||| Sbjct: 27874205 cgattgaggaagccgacaaggccattgagatgcttaaccgcta 27874163 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 496 tggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 27873403 tggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 27873352
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 222 bits (112), Expect = 1e-54 Identities = 238/280 (85%) Strand = Plus / Minus Query: 213 atcagcggaaggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagaga 272 |||| ||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||| Sbjct: 81905 atcaacggaaggcttctgaacgtaaacagggcggctccaaggggctctcgtgtggagaga 81846 Query: 273 cctcctcgacagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcg 332 ||||| | |||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 81845 cctccaaggcagtttgctcctgctttcagggcttatgttggcaacctgccatggcaagtg 81786 Query: 333 gaagactctaggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatc 392 || ||||||||| || ||||| |||||||||||||||| || || ||||| ||| || | Sbjct: 81785 gatgactctaggctgctgcaattgttcagcgagcatggagaggtggttaacgcttcggtt 81726 Query: 393 gtgtatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggcttcaaag 452 || || || |||||| |||||||||| || |||||||||||||| | ||||| || ||| Sbjct: 81725 gtctacgatagagaatctgggcgttctcggggatttggttttgtttccatggcctccaag 81666 Query: 453 gaggatcttgacagtgctatttcagcgcttgatggacagg 492 ||||| || || ||||||||| || ||||||||||||| Sbjct: 81665 gaggagctcgatgatgctatttctgcccttgatggacagg 81626 Score = 133 bits (67), Expect = 8e-28 Identities = 94/102 (92%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 ||||||||||||||||||||||| ||||||||||| || |||||||||||| | ||||| Sbjct: 82578 gaggaggccaaggtgtacgtcgg-taacctgccgtacgacgtcgacagcgagggcctcgc 82520 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 |||||||||||| |||||||| |||||||||||||||||||| Sbjct: 82519 ccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 82478 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 106 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 165 |||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||| Sbjct: 82343 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 82284 Query: 166 ctattgaggaagctgacaaagccatcgagacgtttaaccgcta 208 | ||||||||||| ||||| ||||| |||| | |||||||||| Sbjct: 82283 cgattgaggaagccgacaaggccattgagatgcttaaccgcta 82241 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 496 tggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 547 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 81481 tggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 81430
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) Length = 1251 Score = 220 bits (111), Expect = 4e-54 Identities = 357/438 (81%), Gaps = 1/438 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| |||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 490 gaggaggccaaggtctacgtcgg-aaacctgccctacgacgtcgacagcgagcgcctcgc 548 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | Sbjct: 549 tcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaacagagaaac 608 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 || || || ||||| ||||| ||||| || ||||| ||| ||||||| ||||| || || Sbjct: 609 agatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggctgagaaggc 668 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 | |||| ||| | ||||| || ||| ||||||||||||| ||||| | ||||| Sbjct: 669 tgtggagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaataaagcagc 728 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || || ||||| ||||| || |||||||| |||| | || ||||| |||| ||| Sbjct: 729 tcctagaggctctcgtgtggacagacctcccagacaatctgggccttctctcagaattta 788 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||| ||||||| ||| || ||||| |||||| | ||||||||||||| Sbjct: 789 tgttggcaacctgccttggcaagtggatgattctagattggtggagttgttcagcgagca 848 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| |||||||| |||| | | || |||||| |||||||||||||||| || ||||| Sbjct: 849 tggtaaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcacggggatt 908 Query: 428 tggttttgtaactatggc 445 ||||||||| |||||||| Sbjct: 909 tggttttgttactatggc 926
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence Length = 1108 Score = 204 bits (103), Expect = 3e-49 Identities = 355/438 (81%), Gaps = 1/438 (0%) Strand = Plus / Minus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| |||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 728 gaggaggccaaggtctacgtcgg-aaacctgccctacgacgtcgacagcgagcgcctcgc 670 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtc 127 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | Sbjct: 669 tcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaacagagaaac 610 Query: 128 aggccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 || || || ||||| ||||| ||||| || ||||| ||| ||||||| ||||| || || Sbjct: 609 agatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggctgagaaggc 550 Query: 188 catcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagc 247 | |||| ||| | ||||| || ||| ||||||||||||| ||||| | ||||| Sbjct: 549 tgtggagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaataaagcagc 490 Query: 248 tcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggctta 307 || || ||||| ||||| || |||||||| |||| | || ||||| |||| ||| Sbjct: 489 tcctagaggctctcgtgtggacagacctcccagacaatctgggccttctctcagaattta 430 Query: 308 tgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagca 367 |||||| |||||||| ||||||| ||| || ||||| |||||| ||||||||||||| Sbjct: 429 tgttggcaacctgccttggcaagtggatgattctagattggtggggttgttcagcgagca 370 Query: 368 tggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatt 427 ||| |||||||| |||| | | || |||||| ||||||||||| |||| || ||||| Sbjct: 369 tggtaaagtagttgatgccagagttgtctatgacggagaaactgggggttcacggggatt 310 Query: 428 tggttttgtaactatggc 445 ||||||||| |||||||| Sbjct: 309 tggttttgttactatggc 292
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 Score = 182 bits (92), Expect = 9e-43 Identities = 155/175 (88%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 7 ggaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcg 66 |||||||||||||||||||||||| |||||||| || || |||||||||||||| |||| Sbjct: 499 ggaggaggccaaggtgtacgtcgg-caacctgccctacgacgtcgacagcgagcgcctcg 557 Query: 67 cccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagt 126 | ||||||||||| |||||||| |||||||||||| ||||||||||||||||| |||| Sbjct: 558 cgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttacaaccgagaaa 617 Query: 127 caggccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 181 | | ||||||||||||||| || ||||| ||||||||||| |||||||| ||||| Sbjct: 618 ccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctga 672 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 306 tatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgag 365 ||||| || |||||||||||||||| ||| ||||||||||||||| | ||||||||||| Sbjct: 797 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagcgag 856 Query: 366 catggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgagga 425 ||||| |||| || |||| | | |||| || |||||||| |||||||| || ||||| Sbjct: 857 catggcaaagtggtcgatgccaaggtcgtctacgacagagacactgggcgctcacgaggc 916 Query: 426 tttggttt 433 || ||||| Sbjct: 917 ttcggttt 924
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds Length = 1161 Score = 182 bits (92), Expect = 9e-43 Identities = 155/175 (88%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 7 ggaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcg 66 |||||||||||||||||||||||| |||||||| || || || ||||||||||| |||| Sbjct: 374 ggaggaggccaaggtgtacgtcgg-caacctgccctacgacgtggacagcgagcgcctcg 432 Query: 67 cccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagt 126 | ||||||||||| |||||||| |||||||||||| ||||||||||||| ||||| || Sbjct: 433 cgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttataacagggaaa 492 Query: 127 caggccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 181 ||| |||||||||||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 493 cagaccagagccgtggatttgggtttgtcaccatgagtaccattgaggaggctga 547 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 315 aacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatggggaa 374 |||||||||||||||| ||| |||||||||||||| | ||||||||||||| || || Sbjct: 681 aacctgccatggcaagtggacgactctaggttggtagagctgttcagcgagcacggcaaa 740 Query: 375 gtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttggttt 433 || || |||| | | | || || |||||||| |||||||| || || ||||||||||| Sbjct: 741 gttgtcgatgccagggttgtctacgacagagacactgggcgctcacggggatttggttt 799
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Minus Query: 222 aggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagagacctcctcga 281 |||||||||| ||||||| |||||||| || ||| | || || || |||||||| || Sbjct: 22204474 aggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccccgt 22204415 Query: 282 cagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcggaagactct 341 ||||||| ||||||||||| |||||| || || || || ||||||| ||| |||||| Sbjct: 22204414 cagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgactct 22204355 Query: 342 aggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatcgtgtatgac 401 |||||||| || |||||||||||||||| ||||||| | || | | ||||||||| Sbjct: 22204354 aggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtatgac 22204295 Query: 402 agagaaactgggcgttcgcgaggatttggttttgtaactatggc 445 ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 22204294 agagaaactgggcgttcacgaggatttggttttgtaacaatggc 22204251 Score = 99.6 bits (50), Expect = 1e-17 Identities = 90/102 (88%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| ||||||||| ||||| || || || ||||||||||||| ||||| Sbjct: 22205685 gaggaggccaaggtctacgtcggg-aacctaccctacgacatcgacagcgagcgcctcgc 22205627 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 |||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 22205626 ccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 22205585 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 10 ggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgccc 69 |||||||||||| ||||||||| ||||| || || | ||||||||||||| ||||||| Sbjct: 570754 ggaggccaaggtatacgtcggg-aacctaccctacaacatcgacagcgagcgcctcgccc 570696 Query: 70 agctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 | |||||||| |||| || |||||||||||| ||||||| Sbjct: 570695 aactcttcgaacaggaaggcgtcgtcgaggtctccgaggt 570656 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 106 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 165 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 22205108 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 22205049 Query: 166 ctattgaggaagctga 181 | ||||||| ||||| Sbjct: 22205048 ccgttgaggaggctga 22205033
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Minus Query: 222 aggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagagacctcctcga 281 |||||||||| ||||||| |||||||| || ||| | || || || |||||||| || Sbjct: 24372 aggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccccgt 24313 Query: 282 cagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcggaagactct 341 ||||||| ||||||||||| |||||| || || || || ||||||| ||| |||||| Sbjct: 24312 cagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgactct 24253 Query: 342 aggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatcgtgtatgac 401 |||||||| || |||||||||||||||| ||||||| | || | | ||||||||| Sbjct: 24252 aggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtatgac 24193 Query: 402 agagaaactgggcgttcgcgaggatttggttttgtaactatggc 445 ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 24192 agagaaactgggcgttcacgaggatttggttttgtaacaatggc 24149 Score = 99.6 bits (50), Expect = 1e-17 Identities = 90/102 (88%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| ||||||||| ||||| || || || ||||||||||||| ||||| Sbjct: 25583 gaggaggccaaggtctacgtcggg-aacctaccctacgacatcgacagcgagcgcctcgc 25525 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 |||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 25524 ccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 25483 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 106 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 165 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 25006 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 24947 Query: 166 ctattgaggaagctga 181 | ||||||| ||||| Sbjct: 24946 ccgttgaggaggctga 24931
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Minus Query: 222 aggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagagacctcctcga 281 |||||||||| ||||||| |||||||| || ||| | || || || |||||||| || Sbjct: 125967 aggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccccgt 125908 Query: 282 cagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcggaagactct 341 ||||||| ||||||||||| |||||| || || || || ||||||| ||| |||||| Sbjct: 125907 cagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgactct 125848 Query: 342 aggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatcgtgtatgac 401 |||||||| || |||||||||||||||| ||||||| | || | | ||||||||| Sbjct: 125847 aggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtatgac 125788 Query: 402 agagaaactgggcgttcgcgaggatttggttttgtaactatggc 445 ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 125787 agagaaactgggcgttcacgaggatttggttttgtaacaatggc 125744 Score = 99.6 bits (50), Expect = 1e-17 Identities = 90/102 (88%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| ||||||||| ||||| || || || ||||||||||||| ||||| Sbjct: 127178 gaggaggccaaggtctacgtcggg-aacctaccctacgacatcgacagcgagcgcctcgc 127120 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 |||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 127119 ccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 127078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 106 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 165 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 126601 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 126542 Query: 166 ctattgaggaagctga 181 | ||||||| ||||| Sbjct: 126541 ccgttgaggaggctga 126526
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 117 bits (59), Expect = 5e-23 Identities = 92/102 (90%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 8 gaggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgc 67 |||||||||||||| |||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 703 gaggaggccaaggtctacgtcgg-aaacctgccctacgacgtcgacagcgagcgcctcgc 761 Query: 68 ccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 762 tcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggt 803 Score = 113 bits (57), Expect = 7e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 305 ttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcga 364 ||||||||| |||||||| ||||||| ||| || ||||| |||||| | |||||||||| Sbjct: 2275 ttatgttggcaacctgccttggcaagtggatgattctagattggtggagttgttcagcga 2334 Query: 365 gcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgagg 424 |||||| |||||||| |||| | | || |||||| ||||||||||||||||||| || Sbjct: 2335 gcatggtaaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcgcgggg 2394 Query: 425 atttggttttgtaactatggc 445 |||||||||||| |||||||| Sbjct: 2395 atttggttttgttactatggc 2415 Score = 40.1 bits (20), Expect = 8.5 Identities = 59/72 (81%) Strand = Plus / Plus Query: 110 catttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagtactat 169 ||||||||||||||| ||| || || ||||| ||||| ||||| || ||||| ||| | Sbjct: 1198 catttacaacagagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgt 1257 Query: 170 tgaggaagctga 181 |||||| ||||| Sbjct: 1258 tgaggaggctga 1269
>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781 Length = 350 Score = 75.8 bits (38), Expect = 2e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 306 tatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgag 365 ||||| || |||||||||||||||| ||| ||||||||||||||| | ||||||||||| Sbjct: 304 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagcgag 245 Query: 366 catggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcg 415 ||||| |||| || |||| | | |||| || |||||||| |||||||| Sbjct: 244 catggcaaagtggtcgatgccagggtcgtctacgacagagacactgggcg 195
>dbj|AK070749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064A16, full insert sequence Length = 742 Score = 75.8 bits (38), Expect = 2e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 10 ggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgccc 69 |||||||||||| ||||||||| ||||| || || | ||||||||||||| ||||||| Sbjct: 418 ggaggccaaggtatacgtcggg-aacctaccctacaacatcgacagcgagcgcctcgccc 476 Query: 70 agctcttcgaccaggccggtgtcgtcgaggtcgccgaggtca 111 | |||||||| |||| || |||||||||||| ||||||||| Sbjct: 477 aactcttcgaacaggaaggcgtcgtcgaggtctccgaggtca 518
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 10 ggaggccaaggtgtacgtcgggnaacctgccgtatgatgtcgacagcgagcggctcgccc 69 |||||||||||| ||||||||| ||||| || || | ||||||||||||| ||||||| Sbjct: 23764 ggaggccaaggtatacgtcggg-aacctaccctacaacatcgacagcgagcgcctcgccc 23706 Query: 70 agctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 109 | |||||||| |||| || |||||||||||| ||||||| Sbjct: 23705 aactcttcgaacaggaaggcgtcgtcgaggtctccgaggt 23666
>emb|X57079.1|NSCHRIB N.sylvestris DNA for 31kD chloroplast ribonucleoprotein Length = 5040 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 396 tatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggc 445 ||||||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct: 3632 tatgacagagaaactggccggtcgcgaggttttggttttgttacgatggc 3681
>emb|X53942.1|NSRNP31 Tobacco mRNA for 31 kDa chloroplast ribonucleoprotein Length = 1201 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 396 tatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggc 445 ||||||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct: 903 tatgacagagaaactggccggtcgcgaggttttggttttgttacgatggc 952
>ref|NM_129093.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G35410 mRNA, complete cds Length = 1100 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 420 cgaggatttggttttgtaactatggcttc 448 |||||||||| |||||||||||||||||| Sbjct: 416 cgaggatttgcttttgtaactatggcttc 444
>gb|BT000365.1| Arabidopsis thaliana putative chloroplast RNA binding protein precursor (At2g35410) mRNA, complete cds Length = 963 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 420 cgaggatttggttttgtaactatggcttc 448 |||||||||| |||||||||||||||||| Sbjct: 403 cgaggatttgcttttgtaactatggcttc 431
>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete sequence Length = 79881 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 420 cgaggatttggttttgtaactatggcttc 448 |||||||||| |||||||||||||||||| Sbjct: 50017 cgaggatttgcttttgtaactatggcttc 49989
>gb|AY042799.1| Arabidopsis thaliana putative chloroplast RNA binding protein precursor (At2g35410; T32F12.21) mRNA, complete cds Length = 1062 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 420 cgaggatttggttttgtaactatggcttc 448 |||||||||| |||||||||||||||||| Sbjct: 417 cgaggatttgcttttgtaactatggcttc 445
>emb|Y14557.1|PSY14557 Pisum sativum mRNA for ribonucleoprotein Length = 1187 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 131 ccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 181 |||||| || || ||||||||||| ||||||||||| |||| |||||||| Sbjct: 445 ccagagtcgcggctttggatttgtaaccatgagtaccgttgaagaagctga 495
>gb|AF255058.1|AF255058 Pisum sativum 33 kDa ribonucleoprotein gene, complete cds Length = 2056 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 131 ccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 181 |||||| || || ||||||||||| ||||||||||| |||| |||||||| Sbjct: 544 ccagagtcgcggctttggatttgtaaccatgagtaccgttgaagaagctga 594
>gb|AY752097.1| Uncultured lake bacterium P38.30 16S ribosomal RNA gene, partial sequence Length = 1364 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 193 agacgtttaaccgctacgacatc 215 ||||||||||||||||||||||| Sbjct: 893 agacgtttaaccgctacgacatc 871
>gb|DQ316359.1| Uncultured actinobacterium clone ST11-14 16S ribosomal RNA gene, partial sequence Length = 1492 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 193 agacgtttaaccgctacgacat 214 |||||||||||||||||||||| Sbjct: 1014 agacgtttaaccgctacgacat 993
>emb|X53933.1|NSRNP28 Tobacco mRNA for 28 kDa chloroplast ribonucleoprotein Length = 1079 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Plus Query: 138 cgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 187 ||||||||||| ||||| || ||||| ||| | || |||||||||||||| Sbjct: 436 cgtggatttgggtttgtgacgatgagcactgtggaagaagctgacaaagc 485
>gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding protein mRNA, complete cds Length = 1264 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 144 tttggatttgttaccatgagtactattgaggaagctga 181 ||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 473 tttgggtttgtgaccatgagcactgttgaggaagctga 510 Score = 40.1 bits (20), Expect = 8.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 398 tgacagagaaactgggcgttcgcgaggatttggttttgtaactatggc 445 ||||||||||||||| ||||| || || |||| ||||| |||||||| Sbjct: 727 tgacagagaaactggccgttcacgtggctttgcctttgtcactatggc 774
>ref|NM_187458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 ggatttggatttgttaccatg 161 ||||||||||||||||||||| Sbjct: 184 ggatttggatttgttaccatg 204
>ref|XM_464698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 574 actgggcgttctagaggatttggttttgt 602 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgtggatttggatttgttac 157 |||||||||||||||||||| Sbjct: 319 cgtggatttggatttgttac 338
>ref|XM_464699.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1927 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 792 actgggcgttctagaggatttggttttgt 820 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgtggatttggatttgttac 157 |||||||||||||||||||| Sbjct: 537 cgtggatttggatttgttac 556
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ggatttggatttgttaccatg 161 ||||||||||||||||||||| Sbjct: 8741356 ggatttggatttgttaccatg 8741336
>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds Length = 1217 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 141 ggatttggatttgttaccatgagtactattgaggaagctga 181 |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 551 ggatttgggtttgtaaccatgagcacagttgaggaagctga 591
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ggatttggatttgttaccatg 161 ||||||||||||||||||||| Sbjct: 85007 ggatttggatttgttaccatg 84987
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ggatttggatttgttaccatg 161 ||||||||||||||||||||| Sbjct: 8739191 ggatttggatttgttaccatg 8739171
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 6784916 actgggcgttctagaggatttggttttgt 6784888 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 acaggagatggatggccgcc 507 |||||||||||||||||||| Sbjct: 33700338 acaggagatggatggccgcc 33700319 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgtggatttggatttgttac 157 |||||||||||||||||||| Sbjct: 6785374 cgtggatttggatttgttac 6785355
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 2642 actgggcgttctagaggatttggttttgt 2614 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgtggatttggatttgttac 157 |||||||||||||||||||| Sbjct: 3100 cgtggatttggatttgttac 3081
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 105969 actgggcgttctagaggatttggttttgt 105941 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgtggatttggatttgttac 157 |||||||||||||||||||| Sbjct: 106427 cgtggatttggatttgttac 106408
>dbj|AK120313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L11, full insert sequence Length = 2473 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 1565 actgggcgttctagaggatttggttttgt 1593
>dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A08, full insert sequence Length = 1926 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 actgggcgttcgcgaggatttggttttgt 436 ||||||||||| |||||||||||||||| Sbjct: 791 actgggcgttctagaggatttggttttgt 819 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgtggatttggatttgttac 157 |||||||||||||||||||| Sbjct: 536 cgtggatttggatttgttac 555
>dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026M08, full insert sequence Length = 1438 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 ggatttggatttgttaccatg 161 ||||||||||||||||||||| Sbjct: 345 ggatttggatttgttaccatg 365
>gb|AY107260.1| Zea mays PCO071008 mRNA sequence Length = 737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 cgcagcggcggagagcatggc 580 ||||||||||||||||||||| Sbjct: 82 cgcagcggcggagagcatggc 62
>ref|XM_519003.1| PREDICTED: Pan troglodytes similar to HNRPA2B1 protein (LOC463299), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 401 gaggatttggttttgtaact 420
>ref|NM_196707.1| Oryza sativa (japonica cultivar-group) putative serine/threonine kinase (OSJNBa0046P18.16), mRNA Length = 1338 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tgtcgtcgaggtcgccgagg 108 |||||||||||||||||||| Sbjct: 587 tgtcgtcgaggtcgccgagg 606
>gb|AY022079.1| Oryza sativa microsatellite MRG4404 containing (TC)X15, closest to marker R3324, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 acaggagatggatggccgcc 507 |||||||||||||||||||| Sbjct: 85 acaggagatggatggccgcc 66
>gb|AC147707.5| Canis Familiaris, clone XX-10C7, complete sequence Length = 199690 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaacagggcagctcaaaggg 255 |||||||||||||||||||| Sbjct: 9952 aaacagggcagctcaaaggg 9933
>gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, complete sequence Length = 191336 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 174493 gaggatttggttttgtaact 174474
>gb|BC000506.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1, mRNA (cDNA clone MGC:8493 IMAGE:2822109), complete cds Length = 1541 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 296 gaggatttggttttgtaact 315
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaactatggcttc 448 |||||||||||||||| |||||| |||| Sbjct: 96092 gaggatttggttttgttactatgtcttc 96119
>emb|CR858535.1| Pongo pygmaeus mRNA; cDNA DKFZp469B1233 (from clone DKFZp469B1233) Length = 1735 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 356 gaggatttggttttgtaact 375
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 tgcggcgcagcggcggagag 574 |||||||||||||||||||| Sbjct: 58054 tgcggcgcagcggcggagag 58073
>gb|U09121.1|AH005377S2 Human hnRNP protein A2 gene, exons 2-7 Length = 2680 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 690 gaggatttggttttgtaact 709
>gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-290L7, Complete Sequence, complete sequence Length = 212133 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aggggaggaggccaaggtgt 23 |||||||||||||||||||| Sbjct: 57244 aggggaggaggccaaggtgt 57225
>ref|NM_031243.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1 (HNRPA2B1), transcript variant B1, mRNA Length = 1780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 354 gaggatttggttttgtaact 373
>ref|NM_002137.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1 (HNRPA2B1), transcript variant A2, mRNA Length = 1714 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 318 gaggatttggttttgtaact 337
>gb|AC005290.3| AC005290, complete sequence Length = 66157 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aggggaggaggccaaggtgt 23 |||||||||||||||||||| Sbjct: 59095 aggggaggaggccaaggtgt 59114
>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence Length = 112659 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 5196 gaggatttggttttgtaact 5177
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 tgcggcgcagcggcggagag 574 |||||||||||||||||||| Sbjct: 27789384 tgcggcgcagcggcggagag 27789403
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgtcgtcgaggtcgccgagg 108 |||||||||||||||||||| Sbjct: 15408411 tgtcgtcgaggtcgccgagg 15408392
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgtcgtcgaggtcgccgagg 108 |||||||||||||||||||| Sbjct: 125774 tgtcgtcgaggtcgccgagg 125755
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence Length = 186281 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 tttggttttgtaactatggc 445 |||||||||||||||||||| Sbjct: 96169 tttggttttgtaactatggc 96150
>gb|AF192348.1|AF192348 Saguinus oedipus vitamin D response element binding protein (VDRE-BP2) mRNA, complete cds Length = 1736 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 321 gaggatttggttttgtaact 340
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcgtcgaggtcgccgaggtc 110 |||||||||||||||||||| Sbjct: 5429398 tcgtcgaggtcgccgaggtc 5429379
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 acaggagatggatggccgcc 507 |||||||||||||||||||| Sbjct: 68745 acaggagatggatggccgcc 68726
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 acaggagatggatggccgcc 507 |||||||||||||||||||| Sbjct: 31205 acaggagatggatggccgcc 31186
>emb|BX641084.1|HSM806891 Homo sapiens mRNA; cDNA DKFZp686K0732 (from clone DKFZp686K0732) Length = 5331 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 3938 gaggatttggttttgtaact 3957
>dbj|AK121550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A09, full insert sequence Length = 3695 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgtcgtcgaggtcgccgagg 108 |||||||||||||||||||| Sbjct: 2567 tgtcgtcgaggtcgccgagg 2548
>dbj|AK129839.1| Homo sapiens cDNA FLJ26329 fis, clone HRT02026, highly similar to Heterogeneous nuclear ribonucleoproteins A2/B1 Length = 1704 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 319 gaggatttggttttgtaact 338
>dbj|AK066106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052M01, full insert sequence Length = 4119 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgtcgtcgaggtcgccgagg 108 |||||||||||||||||||| Sbjct: 3080 tgtcgtcgaggtcgccgagg 3061
>emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (from clone DKFZp686G0349) Length = 6299 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 3198 gaggatttggttttgtaact 3217
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgtcgtcgaggtcgccgagg 108 |||||||||||||||||||| Sbjct: 15416652 tgtcgtcgaggtcgccgagg 15416633
>dbj|D28877.1|HUMHNRNP Homo sapiens HNRPA2B1 gene for hnRNP protein A2 and B1, complete cds Length = 11390 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 5743 gaggatttggttttgtaact 5762
>emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chromosome 15, complete sequence Length = 178412 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aggggaggaggccaaggtgt 23 |||||||||||||||||||| Sbjct: 29362 aggggaggaggccaaggtgt 29381
>emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chromosome 15, complete sequence Length = 202904 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aggggaggaggccaaggtgt 23 |||||||||||||||||||| Sbjct: 68421 aggggaggaggccaaggtgt 68402
>gb|M29064.1|HUMRNPB1A Human hnRNP B1 protein mRNA Length = 1760 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 334 gaggatttggttttgtaact 353
>gb|M29065.1|HUMRNPA2A Human hnRNP A2 protein mRNA Length = 1700 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gaggatttggttttgtaact 440 |||||||||||||||||||| Sbjct: 304 gaggatttggttttgtaact 323 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,641,406 Number of Sequences: 3902068 Number of extensions: 4641406 Number of successful extensions: 89672 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89165 Number of HSP's gapped (non-prelim): 478 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
