ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37n02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 961 Score = 551 bits (278), Expect = e-154 Identities = 448/505 (88%) Strand = Plus / Plus Query: 67 aggaggccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctac 126 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 207 aggaggccatgggagaattctccaaggaatcttgcccttctgtgaagaacattttgcttc 266 Query: 127 tggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacg 186 |||||||||| || || || ||||| ||||| |||||||||||||||||| | | || | Sbjct: 267 tggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaatg 326 Query: 187 catctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgct 246 | || | |||| ||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 327 cgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgct 386 Query: 247 cagaagctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagacc 306 |||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||| Sbjct: 387 cagaagctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagacc 446 Query: 307 ttcacttcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctac 366 |||| || || ||||| || || ||||||||||||||||| || ||||||||||| |||| Sbjct: 447 ttcatttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgtactac 506 Query: 367 agggttttgctgattcggttggtcttctactcaggggtgacgttgagaagaggactgcac 426 |||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 507 agggcttctctgattctgttggtcttttactcaggggtgatgttgagaagaggactgcac 566 Query: 427 ttgagaacttggacttgatacttctctgcattgatgagattattgatggcggcataattc 486 | ||||| |||||||||||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 567 tcgagaatctggacttgatacttctctgcatcgatgaaattgtagatggcggcataattc 626 Query: 487 ttgaaacagatgcgaataccattgcggggaaggttgcaaccaatgctgctgacggntctg 546 | ||||||||||| ||||||||||| |||||||||||||||||||||| ||| || |||| Sbjct: 627 tggaaacagatgcaaataccattgccgggaaggttgcaaccaatgctgttgatggttctg 686 Query: 547 ttcccttctctgagcagacaatatc 571 ||||||||||||||||| ||||| Sbjct: 687 cccccttctctgagcagacgatatc 711
>dbj|AK061254.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A06, full insert sequence Length = 961 Score = 551 bits (278), Expect = e-154 Identities = 448/505 (88%) Strand = Plus / Plus Query: 67 aggaggccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctac 126 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 207 aggaggccatgggagaattctccaaggaatcttgcccttctgtgaagaacattttgcttc 266 Query: 127 tggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacg 186 |||||||||| || || || ||||| ||||| |||||||||||||||||| | | || | Sbjct: 267 tggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaatg 326 Query: 187 catctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgct 246 | || | |||| ||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 327 cgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgct 386 Query: 247 cagaagctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagacc 306 |||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||| Sbjct: 387 cagaagctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagacc 446 Query: 307 ttcacttcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctac 366 |||| || || ||||| || || ||||||||||||||||| || ||||||||||| |||| Sbjct: 447 ttcatttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgtactac 506 Query: 367 agggttttgctgattcggttggtcttctactcaggggtgacgttgagaagaggactgcac 426 |||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 507 agggcttctctgattctgttggtcttttactcaggggtgatgttgagaagaggactgcac 566 Query: 427 ttgagaacttggacttgatacttctctgcattgatgagattattgatggcggcataattc 486 | ||||| |||||||||||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 567 tcgagaatctggacttgatacttctctgcatcgatgaaattgtagatggcggcataattc 626 Query: 487 ttgaaacagatgcgaataccattgcggggaaggttgcaaccaatgctgctgacggntctg 546 | ||||||||||| ||||||||||| |||||||||||||||||||||| ||| || |||| Sbjct: 627 tggaaacagatgcaaataccattgccgggaaggttgcaaccaatgctgttgatggttctg 686 Query: 547 ttcccttctctgagcagacaatatc 571 ||||||||||||||||| ||||| Sbjct: 687 cccccttctctgagcagacgatatc 711
>gb|BT016177.1| Zea mays clone Contig10 mRNA sequence Length = 1102 Score = 500 bits (252), Expect = e-138 Identities = 437/499 (87%) Strand = Plus / Plus Query: 73 ccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctactggatt 132 |||||| ||| |||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 198 ccatggcggatttctccaaggaatcttgcccttctgtgaagaacattttacttctggatt 257 Query: 133 ctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacgcatcta 192 |||| |||||||| |||||||| ||||| ||||| ||||||||||||| || ||||| | Sbjct: 258 ctgaaggaaagcgtgttgctgtaaagtatttctcagatgattggccgactaatgcatcaa 317 Query: 193 ggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaag 252 ||| ||| |||||||| |||||||||||||||| |||||||||||||| |||||| Sbjct: 318 agttagcctacgaaaagtctgtttttactaaaactctaaagacaaatgcacggacagaag 377 Query: 253 ctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcact 312 |||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 378 ctgagataacattgtttgatggttatattgtcgtttacaagtttgtacatgaccttcact 437 Query: 313 tcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctacagggtt 372 | || ||||| || |||||||||||||||||||| ||| |||||| ||| ||||| |||| Sbjct: 438 tttttgtcaccgctggagatgatgagaatgagctcatcttagcaagtgtactacatggtt 497 Query: 373 ttgctgattcggttggtcttctactcaggggtgacgttgagaagaggactgcacttgaga 432 || ||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 498 tttctgattctgttggtcttctactcaggggtgatgttgagaagcggactgcgcttgaga 557 Query: 433 acttggacttgatacttctctgcattgatgagattattgatggcggcataattcttgaaa 492 ||||||| ||||||||||||||||| ||||| ||| | ||||| || || || || |||| Sbjct: 558 acttggatttgatacttctctgcatcgatgaaattgtagatgggggaatcatcctggaaa 617 Query: 493 cagatgcgaataccattgcggggaaggttgcaaccaatgctgctgacggntctgttccct 552 ||||||| || |||||||| || ||||||||||||||||||| ||| || ||||| |||| Sbjct: 618 cagatgcaaacaccattgctggtaaggttgcaaccaatgctgttgatggttctgtgccct 677 Query: 553 tctctgagcagacaatatc 571 | ||||||||||| ||||| Sbjct: 678 tttctgagcagacgatatc 696
>dbj|AB040667.1| Zea mays copz2 mRNA for nonclathrin coat protein zeta2-COP, complete cds Length = 910 Score = 500 bits (252), Expect = e-138 Identities = 437/499 (87%) Strand = Plus / Plus Query: 73 ccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctactggatt 132 |||||| ||| |||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 55 ccatggcggatttctccaaggaatcttgcccttctgtgaagaacattttacttctggatt 114 Query: 133 ctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacgcatcta 192 |||| |||||||| |||||||| ||||| ||||| ||||||||||||| || ||||| | Sbjct: 115 ctgaaggaaagcgtgttgctgtaaagtatttctcagatgattggccgactaatgcatcaa 174 Query: 193 ggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaag 252 ||| ||| |||||||| |||||||||||||||| |||||||||||||| |||||| Sbjct: 175 agttagcctacgaaaagtctgtttttactaaaactctaaagacaaatgcacggacagaag 234 Query: 253 ctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcact 312 |||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 235 ctgagataacattgtttgatggttatattgtcgtttacaagtttgtacatgaccttcact 294 Query: 313 tcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctacagggtt 372 | || ||||| || |||||||||||||||||||| ||| |||||| ||| ||||| |||| Sbjct: 295 tttttgtcaccgctggagatgatgagaatgagctcatcttagcaagtgtactacatggtt 354 Query: 373 ttgctgattcggttggtcttctactcaggggtgacgttgagaagaggactgcacttgaga 432 || ||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 355 tttctgattctgttggtcttctactcaggggtgatgttgagaagcggactgcgcttgaga 414 Query: 433 acttggacttgatacttctctgcattgatgagattattgatggcggcataattcttgaaa 492 ||||||| ||||||||||||||||| ||||| ||| | ||||| || || || || |||| Sbjct: 415 acttggatttgatacttctctgcatcgatgaaattgtagatgggggaatcatcctggaaa 474 Query: 493 cagatgcgaataccattgcggggaaggttgcaaccaatgctgctgacggntctgttccct 552 ||||||| || |||||||| || ||||||||||||||||||| ||| || ||||| |||| Sbjct: 475 cagatgcaaacaccattgctggtaaggttgcaaccaatgctgttgatggttctgtgccct 534 Query: 553 tctctgagcagacaatatc 571 | ||||||||||| ||||| Sbjct: 535 tttctgagcagacgatatc 553
>gb|AY104496.1| Zea mays PCO084558 mRNA sequence Length = 1023 Score = 492 bits (248), Expect = e-136 Identities = 436/499 (87%) Strand = Plus / Plus Query: 73 ccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctactggatt 132 |||||| ||| |||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 231 ccatggcggatttctccaaggaatcttgcccttctgtgaagaacattttacttctggatt 290 Query: 133 ctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacgcatcta 192 |||| |||||||| |||||||| ||||| ||||| |||||||||| || || ||||| | Sbjct: 291 ctgaaggaaagcgtgttgctgtaaagtatttctcagatgattggctgactaatgcatcaa 350 Query: 193 ggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaag 252 ||| ||| |||||||| |||||||||||||||| |||||||||||||| |||||| Sbjct: 351 agttagcctacgaaaagtctgtttttactaaaactctaaagacaaatgcacggacagaag 410 Query: 253 ctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcact 312 |||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 411 ctgagataacattgtttgatggttatattgtcgtttacaagtttgtacatgaccttcact 470 Query: 313 tcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctacagggtt 372 | || ||||| || |||||||||||||||||||| ||| |||||| ||| ||||| |||| Sbjct: 471 tttttgtcaccgctggagatgatgagaatgagctcatcttagcaagtgtactacaaggtt 530 Query: 373 ttgctgattcggttggtcttctactcaggggtgacgttgagaagaggactgcacttgaga 432 || ||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 531 tttctgattctgttggtcttctactcaggggtgatgttgagaagcggactgcgcttgaga 590 Query: 433 acttggacttgatacttctctgcattgatgagattattgatggcggcataattcttgaaa 492 ||||||| ||||||||||||||||| ||||| ||| | ||||| || || || || |||| Sbjct: 591 acttggatttgatacttctctgcatcgatgaaattgtagatgggggaatcatcctggaaa 650 Query: 493 cagatgcgaataccattgcggggaaggttgcaaccaatgctgctgacggntctgttccct 552 ||||||| || |||||||| || ||||||||||||||||||| ||| || ||||| |||| Sbjct: 651 cagatgcaaacaccattgctggtaaggttgcaaccaatgctgttgatggttctgtgccct 710 Query: 553 tctctgagcagacaatatc 571 | ||||||||||| ||||| Sbjct: 711 tttctgagcagacgatatc 729
>dbj|AB040041.1| Oryza sativa copz2 mRNA for nonclathrin coat protein zeta2-COP, partial cds Length = 659 Score = 458 bits (231), Expect = e-125 Identities = 392/446 (87%) Strand = Plus / Plus Query: 126 ctggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaac 185 ||||||||||| || || || ||||| ||||| |||||||||||||||||| | | || Sbjct: 1 ctggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaat 60 Query: 186 gcatctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgc 245 || || | |||| ||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 61 gcgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgc 120 Query: 246 tcagaagctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagac 305 ||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||| Sbjct: 121 tcagaagctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagac 180 Query: 306 cttcacttcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgcta 365 ||||| || || ||||| || || ||||||||||||||||| || ||||||||||| ||| Sbjct: 181 cttcatttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgtacta 240 Query: 366 cagggttttgctgattcggttggtcttctactcaggggtgacgttgagaagaggactgca 425 ||||| || ||||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 241 cagggcttctctgattctgttggtcttttactcaggggtgatgttgagaagaggactgca 300 Query: 426 cttgagaacttggacttgatacttctctgcattgatgagattattgatggcggcataatt 485 || ||||| |||||||||||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 301 ctcgagaatctggacttgatacttctctgcatcgatgaaattgtagatggcggcataatt 360 Query: 486 cttgaaacagatgcgaataccattgcggggaaggttgcaaccaatgctgctgacggntct 545 || ||||||||||| ||||||||||| |||||||||||||||||||||| ||| || ||| Sbjct: 361 ctggaaacagatgcaaataccattgccgggaaggttgcaaccaatgctgttgatggttct 420 Query: 546 gttcccttctctgagcagacaatatc 571 | ||||||||||||||||| ||||| Sbjct: 421 gcccccttctctgagcagacgatatc 446
>dbj|AK073474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045O22, full insert sequence Length = 1196 Score = 202 bits (102), Expect = 9e-49 Identities = 165/186 (88%) Strand = Plus / Plus Query: 67 aggaggccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctac 126 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 208 aggaggccatgggagaattctccaaggaatcttgcccttctgtgaagaacattttgcttc 267 Query: 127 tggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacg 186 |||||||||| || || || ||||| ||||| |||||||||||||||||| | | || | Sbjct: 268 tggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaatg 327 Query: 187 catctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgct 246 | || | |||| ||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 328 cgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgct 387 Query: 247 cagaag 252 |||||| Sbjct: 388 cagaag 393
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||||||||| |||||||||||||||||||| ||||||||||| || || || |||| Sbjct: 12609385 aggaatcttgcccttctgtgaagaacattttgcttctggattctgaagggaaacgtgttg 12609444 Query: 151 ctgtgaagtacttctcggatgattggccgaacaacgcatctaggttgacctttgaaaagt 210 | ||||| |||||||||||||||||| | | || || || | |||| |||||||||||| Sbjct: 12609445 ccgtgaaatacttctcggatgattggtctagtaatgcgtcaaagttggcctttgaaaagt 12609504 Query: 211 ccatttttactaaaactctgaagacaaatgcacgctcagaag 252 | | ||||||||||||||||||||||||||||||||||||| Sbjct: 12609505 ctgtctttactaaaactctgaagacaaatgcacgctcagaag 12609546 Score = 149 bits (75), Expect = 1e-32 Identities = 132/151 (87%) Strand = Plus / Plus Query: 251 agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 310 |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 12610370 agctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagaccttca 12610429 Query: 311 cttcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctacaggg 370 || || ||||| || || ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 12610430 tttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgtactacaggg 12610489 Query: 371 ttttgctgattcggttggtcttctactcagg 401 || ||||||| ||||||||| |||||||| Sbjct: 12610490 cttctctgattctgttggtcttttactcagg 12610520 Score = 109 bits (55), Expect = 1e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 478 gcataattcttgaaacagatgcgaataccattgcggggaaggttgcaaccaatgctgctg 537 |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 12611934 gcataattctggaaacagatgcaaataccattgccgggaaggttgcaaccaatgctgttg 12611993 Query: 538 acggntctgttcccttctctgagcag 563 | || |||| ||||||||||||||| Sbjct: 12611994 atggttctgcccccttctctgagcag 12612019 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 399 aggggtgacgttgagaagaggactgcacttgagaacttggacttgatacttctctgcatt 458 |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 12610608 aggggtgatgttgagaagaggactgcactcgagaatctggacttgatacttctctgcatc 12610667 Query: 459 gatgagattattgatggcgg 478 ||||| ||| | |||||||| Sbjct: 12610668 gatgaaattgtagatggcgg 12610687 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 67 aggaggccatgggggaattctccaagg 93 ||||||||||||| ||||||||||||| Sbjct: 12608725 aggaggccatgggagaattctccaagg 12608751
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||||||||| |||||||||||||||||||| ||||||||||| || || || |||| Sbjct: 6444 aggaatcttgcccttctgtgaagaacattttgcttctggattctgaagggaaacgtgttg 6503 Query: 151 ctgtgaagtacttctcggatgattggccgaacaacgcatctaggttgacctttgaaaagt 210 | ||||| |||||||||||||||||| | | || || || | |||| |||||||||||| Sbjct: 6504 ccgtgaaatacttctcggatgattggtctagtaatgcgtcaaagttggcctttgaaaagt 6563 Query: 211 ccatttttactaaaactctgaagacaaatgcacgctcagaag 252 | | ||||||||||||||||||||||||||||||||||||| Sbjct: 6564 ctgtctttactaaaactctgaagacaaatgcacgctcagaag 6605 Score = 149 bits (75), Expect = 1e-32 Identities = 132/151 (87%) Strand = Plus / Plus Query: 251 agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 310 |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 7429 agctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagaccttca 7488 Query: 311 cttcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctacaggg 370 || || ||||| || || ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 7489 tttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgtactacaggg 7548 Query: 371 ttttgctgattcggttggtcttctactcagg 401 || ||||||| ||||||||| |||||||| Sbjct: 7549 cttctctgattctgttggtcttttactcagg 7579 Score = 109 bits (55), Expect = 1e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 478 gcataattcttgaaacagatgcgaataccattgcggggaaggttgcaaccaatgctgctg 537 |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 8993 gcataattctggaaacagatgcaaataccattgccgggaaggttgcaaccaatgctgttg 9052 Query: 538 acggntctgttcccttctctgagcag 563 | || |||| ||||||||||||||| Sbjct: 9053 atggttctgcccccttctctgagcag 9078 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 399 aggggtgacgttgagaagaggactgcacttgagaacttggacttgatacttctctgcatt 458 |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 7667 aggggtgatgttgagaagaggactgcactcgagaatctggacttgatacttctctgcatc 7726 Query: 459 gatgagattattgatggcgg 478 ||||| ||| | |||||||| Sbjct: 7727 gatgaaattgtagatggcgg 7746 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 67 aggaggccatgggggaattctccaagg 93 ||||||||||||| ||||||||||||| Sbjct: 5784 aggaggccatgggagaattctccaagg 5810
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||||||||| |||||||||||||||||||| ||||||||||| || || || |||| Sbjct: 113918 aggaatcttgcccttctgtgaagaacattttgcttctggattctgaagggaaacgtgttg 113977 Query: 151 ctgtgaagtacttctcggatgattggccgaacaacgcatctaggttgacctttgaaaagt 210 | ||||| |||||||||||||||||| | | || || || | |||| |||||||||||| Sbjct: 113978 ccgtgaaatacttctcggatgattggtctagtaatgcgtcaaagttggcctttgaaaagt 114037 Query: 211 ccatttttactaaaactctgaagacaaatgcacgctcagaag 252 | | ||||||||||||||||||||||||||||||||||||| Sbjct: 114038 ctgtctttactaaaactctgaagacaaatgcacgctcagaag 114079 Score = 149 bits (75), Expect = 1e-32 Identities = 132/151 (87%) Strand = Plus / Plus Query: 251 agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 310 |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 114903 agctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagaccttca 114962 Query: 311 cttcttcgtcactgccggagatgatgagaatgagctaatcatagcaaatgtgctacaggg 370 || || ||||| || || ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 114963 tttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgtactacaggg 115022 Query: 371 ttttgctgattcggttggtcttctactcagg 401 || ||||||| ||||||||| |||||||| Sbjct: 115023 cttctctgattctgttggtcttttactcagg 115053 Score = 109 bits (55), Expect = 1e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 478 gcataattcttgaaacagatgcgaataccattgcggggaaggttgcaaccaatgctgctg 537 |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 116467 gcataattctggaaacagatgcaaataccattgccgggaaggttgcaaccaatgctgttg 116526 Query: 538 acggntctgttcccttctctgagcag 563 | || |||| ||||||||||||||| Sbjct: 116527 atggttctgcccccttctctgagcag 116552 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 399 aggggtgacgttgagaagaggactgcacttgagaacttggacttgatacttctctgcatt 458 |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 115141 aggggtgatgttgagaagaggactgcactcgagaatctggacttgatacttctctgcatc 115200 Query: 459 gatgagattattgatggcgg 478 ||||| ||| | |||||||| Sbjct: 115201 gatgaaattgtagatggcgg 115220 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 67 aggaggccatgggggaattctccaagg 93 ||||||||||||| ||||||||||||| Sbjct: 113258 aggaggccatgggagaattctccaagg 113284
>dbj|AB040043.1| Lycopersicon esculentum copz2 mRNA for nonclathrin coat protein zeta2-COP, complete cds Length = 862 Score = 99.6 bits (50), Expect = 1e-17 Identities = 236/298 (79%) Strand = Plus / Plus Query: 201 tttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaagctgagata 260 ||||| ||||| |||||||| || |||| |||||||||||| || | |||||||||||| Sbjct: 187 tttgagaagtcaatttttaccaagactcagaagacaaatgctcgaactgaagctgagata 246 Query: 261 acattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcacttcttcgtc 320 || || |||| |||| |||||||| || |||||||| |||||||||||||| || || Sbjct: 247 gcaatgtttgacagtaacattgttgtctataagtttgtgcaagaccttcacttttttgtg 306 Query: 321 actgccggagatgatgagaatgagctaatcatagcaaatgtgctacagggttttgctgat 380 || | || |||||||| ||||| ||||| |||| | ||| || ||||| || |||| Sbjct: 307 acgggaggtgatgatgaaaatgaactaattctagccactgttctccagggcttctatgat 366 Query: 381 tcggttggtcttctactcaggggtgacgttgagaagaggactgcacttgagaacttggac 440 | ||| ||| |||||||| || | ||||| ||||| || |||||||||||||| Sbjct: 367 gcagttacccttttactcaggagtaatgttgaacagagggaggctcttgagaacttggat 426 Query: 441 ttgatacttctctgcattgatgagattattgatggcggcataattcttgaaacagatg 498 ||||| ||||| ||| | ||||||||| | ||||| || || |||||||||||||||| Sbjct: 427 ttgattcttctgtgcttggatgagattgtggatggagggatgattcttgaaacagatg 484
>emb|AJ866986.1| Medicago truncatula mRNA for coatomer zeta1 subunit (copz1 gene) Length = 543 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 231 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 290 ||||||||||| || ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 151 aagacaaatgcgcggacagaagctgagataacactgcttgagaacaatatcgttgtttac 210 Query: 291 aagtttgtacaagaccttcacttcttcgtcactgccggagatgatgagaatgagct 346 || ||||| |||||| | || ||||| ||||||| || |||||||| |||||||| Sbjct: 211 aaatttgtgcaagacttgcatttctttgtcactggtggtgatgatgaaaatgagct 266 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 423 gcacttgagaacttggacttgatacttctctgcattgatgagattattgatgg 475 ||||||||||||||||| | || ||| | ||| ||||||||||| ||||||| Sbjct: 343 gcacttgagaacttggatctcattcttttatgccttgatgagattgttgatgg 395
>dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT12N11, TM0066, complete sequence Length = 79585 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 423 gcacttgagaacttggacttgatacttctctgcattgatgagattattgatggcgg 478 ||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 7249 gcacttgagaacttggatctgattcttctttgcattgatgaaattattgatggcgg 7194 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 279 attgttgtttacaagtttgtacaagaccttcacttctt 316 |||||||||||||||||||| ||||| ||||||||||| Sbjct: 7512 attgttgtttacaagtttgtccaagatcttcacttctt 7475
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| | Sbjct: 88180 aggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcg 88121 Query: 151 ctgtgaagtacttctcggatgattggcc 178 | || ||||||| | ||||||||||||| Sbjct: 88120 ccgtcaagtactacacggatgattggcc 88093
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| | Sbjct: 22498773 aggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcg 22498714 Query: 151 ctgtgaagtacttctcggatgattggcc 178 | || ||||||| | ||||||||||||| Sbjct: 22498713 ccgtcaagtactacacggatgattggcc 22498686
>ref|XM_475371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 534 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 92 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 151 |||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| || Sbjct: 3 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 62 Query: 152 tgtgaagtacttctcggatgattggcc 178 || ||||||| | ||||||||||||| Sbjct: 63 cgtcaagtactacacggatgattggcc 89
>dbj|AK104166.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D02, full insert sequence Length = 925 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 92 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 151 |||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| || Sbjct: 96 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 155 Query: 152 tgtgaagtacttctcggatgattggcc 178 || ||||||| | ||||||||||||| Sbjct: 156 cgtcaagtactacacggatgattggcc 182
>dbj|AK099044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145O08, full insert sequence Length = 969 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 92 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 151 |||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| || Sbjct: 116 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 175 Query: 152 tgtgaagtacttctcggatgattggcc 178 || ||||||| | ||||||||||||| Sbjct: 176 cgtcaagtactacacggatgattggcc 202
>dbj|AK066739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079J15, full insert sequence Length = 997 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 92 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 151 |||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| || Sbjct: 181 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 240 Query: 152 tgtgaagtacttctcggatgattggcc 178 || ||||||| | ||||||||||||| Sbjct: 241 cgtcaagtactacacggatgattggcc 267
>dbj|AK059189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H02, full insert sequence Length = 889 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 92 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 151 |||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| || Sbjct: 120 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 179 Query: 152 tgtgaagtacttctcggatgattggcc 178 || ||||||| | ||||||||||||| Sbjct: 180 cgtcaagtactacacggatgattggcc 206
>dbj|AB042259.1| Oryza sativa (japonica cultivar-group) copz1 mRNA for zeta1-COP, complete cds Length = 807 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 92 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 151 |||||| ||||| || ||||||||||| | || |||||||| ||||| |||||||| || Sbjct: 73 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 132 Query: 152 tgtgaagtacttctcggatgattggcc 178 || ||||||| | ||||||||||||| Sbjct: 133 cgtcaagtactacacggatgattggcc 159
>gb|BT014597.1| Lycopersicon esculentum clone 134072F, mRNA sequence Length = 759 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 111 aagaacattttgctactggattctgagggaaagcgcgttgctgtgaagtacttctcggat 170 ||||||||| |||| || ||||| || |||||||| |||||||| || |||| ||| ||| Sbjct: 127 aagaacattctgcttctagattccgaaggaaagcgtgttgctgtaaactactactcagat 186 Query: 171 gattggcc 178 |||||||| Sbjct: 187 gattggcc 194 Score = 44.1 bits (22), Expect = 0.51 Identities = 70/86 (81%) Strand = Plus / Plus Query: 231 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 290 ||||||||||| | ||||||| ||||| ||| || ||||| | |||||||||| ||| Sbjct: 247 aagacaaatgctagggcagaagcggagattacaatgtttgataattatattgttgtctac 306 Query: 291 aagtttgtacaagaccttcacttctt 316 ||||||| ||||| ||||| ||||| Sbjct: 307 aagtttgctcaagatcttcatttctt 332
>emb|AJ866987.1| Medicago truncatula mRNA for coatomer zeta2 subunit (copz2 gene) Length = 549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 423 gcacttgagaacttggacttgatacttctctgcattgatgagattattgatggcggcata 482 |||||||||||||||||| | || || | ||||||||||| |||||||||| || || Sbjct: 349 gcacttgagaacttggacctcattctattgtgcattgatgaaattattgatgcaggtatt 408 Query: 483 attcttgaaac 493 ||||||||||| Sbjct: 409 attcttgaaac 419 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 285 gtttacaagtttgtacaagaccttcacttctt 316 |||||||||||||| ||||| ||||||||||| Sbjct: 211 gtttacaagtttgtccaagatcttcacttctt 242
>dbj|AB040543.1| Glycine max copz2 mRNA for nonclathrin coat protein zeta2-COP, complete cds Length = 833 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 279 attgttgtttacaagtttgtacaagaccttcacttctt 316 |||||| ||||||||||||| ||||| ||||||||||| Sbjct: 201 attgttctttacaagtttgtccaagatcttcacttctt 238 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 453 tgcattgatgagattattgatggcggcataattcttgaaac 493 ||||||||||| ||| |||||||||| || || |||||||| Sbjct: 375 tgcattgatgaaattgttgatggcggtatcatacttgaaac 415
>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence Length = 144042 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 423 gcacttgagaacttggacttgatacttctctgcattgatgagattattgatg 474 |||||||||||||||||| | || || | ||||||||||| |||||||||| Sbjct: 99159 gcacttgagaacttggacctcattctattgtgcattgatgaaattattgatg 99210 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 285 gtttacaagtttgtacaagaccttcacttctt 316 |||||||||||||| ||||| ||||||||||| Sbjct: 98900 gtttacaagtttgtccaagatcttcacttctt 98931
>dbj|AB040040.1| Glycine max copz1 mRNA for nonclathrin coat protein zeta1-COP, complete cds Length = 820 Score = 48.1 bits (24), Expect = 0.032 Identities = 93/116 (80%) Strand = Plus / Plus Query: 231 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 290 ||||||||||| || ||||||||||| ||||| | ||||| ||||| || ||||| Sbjct: 191 aagacaaatgctcgtacagaagctgaggtaacactacttgagaacaatatcattatttac 250 Query: 291 aagtttgtacaagaccttcacttcttcgtcactgccggagatgatgagaatgagct 346 || |||||||||||||| || || || ||||||| || || ||||| |||||||| Sbjct: 251 aaatttgtacaagacctgcatttttttgtcactggtggtgaagatgaaaatgagct 306
>ref|NM_116921.2| Arabidopsis thaliana unknown protein AT4G08520 mRNA, complete cds Length = 836 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 231 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 290 ||||| ||||| ||| ||||||||||||| ||| || | || ||||||||||||| || Sbjct: 214 aagaccaatgctcgcacagaagctgagatcacactgttggagagtaatattgttgtctat 273 Query: 291 aagtttg 297 ||||||| Sbjct: 274 aagtttg 280
>gb|AY150422.1| Arabidopsis thaliana putative coatomer protein (At4g08520) mRNA, complete cds Length = 577 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 231 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 290 ||||| ||||| ||| ||||||||||||| ||| || | || ||||||||||||| || Sbjct: 154 aagaccaatgctcgcacagaagctgagatcacactgttggagagtaatattgttgtctat 213 Query: 291 aagtttg 297 ||||||| Sbjct: 214 aagtttg 220
>gb|AY074506.1| Arabidopsis thaliana putative coatomer protein (At4g08520) mRNA, complete cds Length = 844 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 231 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 290 ||||| ||||| ||| ||||||||||||| ||| || | || ||||||||||||| || Sbjct: 206 aagaccaatgctcgcacagaagctgagatcacactgttggagagtaatattgttgtctat 265 Query: 291 aagtttg 297 ||||||| Sbjct: 266 aagtttg 272
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ttcgtcactgccggagatgat 335 ||||||||||||||||||||| Sbjct: 1397945 ttcgtcactgccggagatgat 1397965
>emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 in linkage group 23 Contains a novel gene similar to PHLDA3, part of two novel genes, a gene for a novel troponin I, the tnnt2 gene for cardiac troponin T2 and three CpG islands, complete sequence Length = 103409 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 256 agataacattgcttgatggtaatattgtt 284 |||||||||| ||||||||||||| |||| Sbjct: 55942 agataacattacttgatggtaataatgtt 55970
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 401 gggtgacgttgagaagaggactgcacttgagaacttggacttgatacttctct 453 |||||| |||||||||| | ||||| ||||||||||| |||||||||||| Sbjct: 3880676 gggtgatgttgagaagacagccgcactcaagaacttggacatgatacttctct 3880624
>gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 of 195 of the complete sequence Length = 10455 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 ttcgtcactgccggagatgat 335 ||||||||||||||||||||| Sbjct: 1762 ttcgtcactgccggagatgat 1742
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ttcgtcactgccggagatgat 335 ||||||||||||||||||||| Sbjct: 1416028 ttcgtcactgccggagatgat 1416048
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1080A02 Length = 151360 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 401 gggtgacgttgagaagaggactgcacttgagaacttggacttgatacttctct 453 |||||| |||||||||| | ||||| ||||||||||| |||||||||||| Sbjct: 120192 gggtgatgttgagaagacagccgcactcaagaacttggacatgatacttctct 120140
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 401 gggtgacgttgagaagaggactgcacttgagaacttggacttgatacttctct 453 |||||| |||||||||| | ||||| ||||||||||| |||||||||||| Sbjct: 12188 gggtgatgttgagaagacagccgcactcaagaacttggacatgatacttctct 12136
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ttcgtcactgccggagatgat 335 ||||||||||||||||||||| Sbjct: 1413178 ttcgtcactgccggagatgat 1413198
>gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome 13, complete sequence Length = 213473 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 gcagacaatatcccaagctc 579 |||||||||||||||||||| Sbjct: 149314 gcagacaatatcccaagctc 149295
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence Length = 108135 Score = 40.1 bits (20), Expect = 7.9 Identities = 59/72 (81%) Strand = Plus / Plus Query: 251 agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 310 ||||||||||||||| ||||| ||||| || ||||||| |||| ||||||||| || Sbjct: 15923 agctgagataacattacttgagaacaatatcattatttacaaatttgcacaagacctgca 15982 Query: 311 cttcttcgtcac 322 ||||| ||||| Sbjct: 15983 tttctttgtcac 15994
>gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, alternative splice products Length = 121028 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 tgaagaacattttgctactggatt 132 |||||||||||||||||| ||||| Sbjct: 5197 tgaagaacattttgctacaggatt 5220
>gb|AC034214.5| Homo sapiens chromosome 5 clone CTD-2001E22, complete sequence Length = 108661 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gttgcaaccaatgctgctga 538 |||||||||||||||||||| Sbjct: 10475 gttgcaaccaatgctgctga 10456
>gb|AC026787.5| Homo sapiens chromosome 5 clone CTD-2143L24, complete sequence Length = 146296 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gttgcaaccaatgctgctga 538 |||||||||||||||||||| Sbjct: 44113 gttgcaaccaatgctgctga 44132
>gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome 17, complete sequence Length = 180258 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 gcagacaatatcccaagctc 579 |||||||||||||||||||| Sbjct: 54453 gcagacaatatcccaagctc 54434
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 59/72 (81%) Strand = Plus / Plus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||| || || || |||||||||||| | | |||||||| || || |||||||| | Sbjct: 35975288 aggaatcctgtccttcggtgaagaacattcttgtgctggattccgaagggaagcgcgtgg 35975347 Query: 151 ctgtgaagtact 162 | |||||||||| Sbjct: 35975348 cggtgaagtact 35975359
>gb|AC025181.8| Homo sapiens chromosome 5 clone CTD-2186M15, complete sequence Length = 96399 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 taaaactctgaagacaaatgcacg 244 ||||||||| |||||||||||||| Sbjct: 75770 taaaactcttaagacaaatgcacg 75747
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 40.1 bits (20), Expect = 7.9 Identities = 59/72 (81%) Strand = Plus / Plus Query: 91 aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 150 ||||||| || || || |||||||||||| | | |||||||| || || |||||||| | Sbjct: 73966 aggaatcctgtccttcggtgaagaacattcttgtgctggattccgaagggaagcgcgtgg 74025 Query: 151 ctgtgaagtact 162 | |||||||||| Sbjct: 74026 cggtgaagtact 74037
>gb|AC003015.1|AC003015 Human BAC clone GS1-113H23 from 5p15.2, complete sequence Length = 132953 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gttgcaaccaatgctgctga 538 |||||||||||||||||||| Sbjct: 60572 gttgcaaccaatgctgctga 60553
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 aaaagtccatttttactaaa 224 |||||||||||||||||||| Sbjct: 1366653 aaaagtccatttttactaaa 1366634
>gb|AY105099.1| Zea mays PCO093572 mRNA sequence Length = 1077 Score = 40.1 bits (20), Expect = 7.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 99 tgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgctgtgaag 158 |||||||| ||||||||||| | | ||||| || |||||||||||||| || || ||| Sbjct: 198 tgcccgtcggtgaagaacatcctcttgctggactcggagggaaagcgcgtcgccgtaaag 257 Query: 159 tact 162 |||| Sbjct: 258 tact 261
>emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2017C7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189116 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tgaagaacattttgctactggatt 132 |||||||||||||||||| ||||| Sbjct: 66463 tgaagaacattttgctacaggatt 66440
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence Length = 124443 Score = 40.1 bits (20), Expect = 7.9 Identities = 59/72 (81%) Strand = Plus / Minus Query: 251 agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 310 ||||||||||||||| ||||| ||||| || ||||||| |||| ||||||||| || Sbjct: 19782 agctgagataacattacttgagaacaatatcattatttacaaatttgcacaagacctgca 19723 Query: 311 cttcttcgtcac 322 ||||| ||||| Sbjct: 19722 tttctttgtcac 19711
>emb|AL683892.12| Mouse DNA sequence from clone RP23-440J15 on chromosome X, complete sequence Length = 136809 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 attgatgagattattgatgg 475 |||||||||||||||||||| Sbjct: 70532 attgatgagattattgatgg 70551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,208,034 Number of Sequences: 3902068 Number of extensions: 5208034 Number of successful extensions: 136504 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 136213 Number of HSP's gapped (non-prelim): 279 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
