ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags38b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104874.1| Zea mays PCO128535 mRNA sequence Length = 1001 Score = 543 bits (274), Expect = e-151 Identities = 471/539 (87%) Strand = Plus / Plus Query: 1 gtacaccatcacaaccgatgctctcgatgcactctacnnnnnnnttaaggcaaagggggt 60 |||||||||||| || |||||||||||| |||||| ||||| |||||||||| Sbjct: 53 gtacaccatcacgactgatgctctcgatcagctctacaaaaaaattaagtcaaagggggt 112 Query: 61 gacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcatcctgtggt 120 ||||||||||| ||| |||| ||||| || || ||||| ||||| |||||||||||||| Sbjct: 113 tacaatgacagcactgttggctaaggcgacggcaatggctctggttcagcatcctgtggt 172 Query: 121 gaactccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgt 180 ||||| ||||||||| ||||| ||||||| || ||||||| || || ||||||||||| Sbjct: 173 gaactgcagctgcagggatggaaagagcttcacatacaacaaaagtataaacattgctgt 232 Query: 181 ggcggtggccatcgatggtggattgataacccccgtgctccaggatgctgataagcttga 240 ||| |||||||| |||||||| ||||| || || || || || ||||||||||||||||| Sbjct: 233 ggcagtggccatagatggtgggttgattacaccggttcttcaagatgctgataagcttga 292 Query: 241 tatttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagct 300 ||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||| Sbjct: 293 catttattcattgtcaaggaaatggaaggagttggttgataaggcgcgagcaaagcagct 352 Query: 301 gcagccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagt 360 ||||||||| |||||||||||||| ||||| |||||||| || ||||||||||||||||| Sbjct: 353 gcagccccatgagtacaactctggcacctttactctttcgaatcttggtatgtttggagt 412 Query: 361 tgatagattcgatgcgatcttgccacctggaactggagcaatcatggctgttggtgcatc 420 |||||| |||||||| || |||||||||||||||| ||||||||||| || |||||||| Sbjct: 413 tgataggttcgatgcaatactgccacctggaactggcgcaatcatggccgtcggtgcatc 472 Query: 421 acaaccgacagttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggt 480 | ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 473 agaaccgacagttgttggtacaaaagacggtagaatcgggatcaagagccaaatgcaggt 532 Query: 481 caatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgcaaa 539 |||||||| ||||||||||| |||||||||||| |||| |||||||| |||||||||| Sbjct: 533 aaatgttaccgctgatcatcgggttatttatggagctgaccttgccgcttttctgcaaa 591
>dbj|AK099737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090I09, full insert sequence Length = 1831 Score = 502 bits (253), Expect = e-139 Identities = 465/538 (86%) Strand = Plus / Plus Query: 2 tacaccatcacaaccgatgctctcgatgcactctacnnnnnnnttaaggcaaagggggtg 61 |||||| |||||||||||||||| |||||||||||| ||||| | ||||| ||| Sbjct: 936 tacaccttcacaaccgatgctctggatgcactctacaagaagattaagccgaagggtgtg 995 Query: 62 acaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcatcctgtggtg 121 |||||| | || ||| |||| ||||| || || |||||||| ||||| || || || | Sbjct: 996 acaatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacacccggttata 1055 Query: 122 aactccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtg 181 ||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 1056 aactccagctgcagagatgggaagagcttcacttacaacagcagcataaacatcgctgtg 1115 Query: 182 gcggtggccatcgatggtggattgataacccccgtgctccaggatgctgataagcttgat 241 || ||||||||||||||||| ||||| || || ||||| | |||||||||||||| || Sbjct: 1116 gcagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgataagctcgac 1175 Query: 242 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagctg 301 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 1176 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 1235 Query: 302 cagccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagtt 361 |||||||| || ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 1236 cagccccatgaatacaattctggcacctttactatttcaaaccttggtatgtttggagtt 1295 Query: 362 gatagattcgatgcgatcttgccacctggaactggagcaatcatggctgttggtgcatca 421 || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1296 gacagatttgatgcaatcttgccacctggaactggtgcaatcatggccgttggatcatca 1355 Query: 422 caaccgacagttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtc 481 ||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 1356 caaccaacacttgttggtacaaaagatggtagtattgggatcaagaaccaaatgcaggtc 1415 Query: 482 aatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgcaaa 539 |||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||| Sbjct: 1416 aatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgcaaa 1473
>dbj|AK069414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018G17, full insert sequence Length = 890 Score = 500 bits (252), Expect = e-138 Identities = 464/537 (86%) Strand = Plus / Plus Query: 3 acaccatcacaaccgatgctctcgatgcactctacnnnnnnnttaaggcaaagggggtga 62 ||||| |||||||||||||||| |||||||||||| ||||| | ||||| |||| Sbjct: 1 acaccttcacaaccgatgctctggatgcactctacaagaagattaagccgaagggtgtga 60 Query: 63 caatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcatcctgtggtga 122 ||||| | || ||| |||| ||||| || || |||||||| ||||| || || || | | Sbjct: 61 caatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacacccggttataa 120 Query: 123 actccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtgg 182 |||||||||||||||||||| ||||||| ||||||||||| ||||| ||||| ||||||| Sbjct: 121 actccagctgcagagatgggaagagcttcacttacaacagcagcataaacatcgctgtgg 180 Query: 183 cggtggccatcgatggtggattgataacccccgtgctccaggatgctgataagcttgata 242 | ||||||||||||||||| ||||| || || ||||| | |||||||||||||| || | Sbjct: 181 cagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgataagctcgaca 240 Query: 243 tttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagctgc 302 ||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| | Sbjct: 241 tttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagctac 300 Query: 303 agccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttg 362 ||||||| || ||||| ||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 301 agccccatgaatacaattctggcacctttactatttcaaaccttggtatgtttggagttg 360 Query: 363 atagattcgatgcgatcttgccacctggaactggagcaatcatggctgttggtgcatcac 422 | ||||| ||||| |||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 361 acagatttgatgcaatcttgccacctggaactggtgcaatcatggccgttggatcatcac 420 Query: 423 aaccgacagttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtca 482 |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 421 aaccaacacttgttggtacaaaagatggtagtattgggatcaagaaccaaatgcaggtca 480 Query: 483 atgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgcaaa 539 ||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||| Sbjct: 481 atgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgcaaa 537
>gb|BT024020.1| Zea mays clone EL01N0555A06 mRNA sequence Length = 1898 Score = 486 bits (245), Expect = e-134 Identities = 463/538 (86%) Strand = Plus / Plus Query: 2 tacaccatcacaaccgatgctctcgatgcactctacnnnnnnnttaaggcaaagggggtg 61 |||||||||||||| |||||||| ||| |||||| ||||| | |||||||| Sbjct: 966 tacaccatcacaactgatgctcttgatcagctctacaaaaaaattaagtcgaagggggtt 1025 Query: 62 acaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcatcctgtggtg 121 ||||||||||| ||| |||| ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 1026 acaatgacagcactgttggctaaggcgacagcaatggcgctggttcagcatcctgtggtg 1085 Query: 122 aactccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtg 181 |||||||||||||| |||||| ||||||| || |||| |||||| ||||||||||| ||| Sbjct: 1086 aactccagctgcagggatgggaagagcttcacctacagcagtagtatcaacattgccgtg 1145 Query: 182 gcggtggccatcgatggtggattgataacccccgtgctccaggatgctgataagcttgat 241 || |||||||| |||||||| ||||| || || || || || ||||||||||||||||| Sbjct: 1146 gcagtggccatagatggtgggttgattacaccagttcttcaagatgctgataagcttgac 1205 Query: 242 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagctg 301 ||||||||| |||||||||||||||| ||| | ||||||||||| || ||||||||| || Sbjct: 1206 atttattcattgtcaaggaaatggaaagagttagttgataaggcgcgagcaaagcagttg 1265 Query: 302 cagccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagtt 361 |||||||| |||||||||||||| || || ||||| || || |||||||||||||||||| Sbjct: 1266 cagccccatgagtacaactctggcacgtttactctctcgaatcttggtatgtttggagtt 1325 Query: 362 gatagattcgatgcgatcttgccacctggaactggagcaatcatggctgttggtgcatca 421 ||||| || ||||| || |||||||||||||||||||||||||||| || || |||||| Sbjct: 1326 gataggtttgatgcaatactgccacctggaactggagcaatcatggccgtcggggcatca 1385 Query: 422 caaccgacagttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtc 481 |||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1386 gaacccaccattgttggtacaaaagatggtagaattgggatcaagaatcaaatgcaggta 1445 Query: 482 aatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgcaaa 539 |||||||| || |||||||| |||||||||||| |||| ||||| || |||||||||| Sbjct: 1446 aatgttaccgccgatcatcgggttatttatggagctgaccttgctgcttttctgcaaa 1503
>gb|U16254.1|ZMU16254 Zea mays dihydrolipoamide acetyl transferase (ZM/DHLAAT) mRNA, complete cds Length = 564 Score = 442 bits (223), Expect = e-121 Identities = 383/434 (88%), Gaps = 3/434 (0%) Strand = Plus / Plus Query: 95 atggcgctggtgcagcatcctgtggtgaactccagctgcagagatgggcagagctttact 154 ||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| || Sbjct: 16 atggctctggttcagcatcctgtggtgaactgcagctgcagggatggaaagagcttcaca 75 Query: 155 tacaacagtagcatcaacattgctgtggcggtggccatcgatggtggattgataaccccc 214 ||||||| || ||||||||||||||||| |||||||| |||||||| ||||| || || Sbjct: 76 tacaacaaaagtatcaacattgctgtggcagtggccatagatggtgggttgattacaccg 135 Query: 215 gtgctccaggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctg 274 || || || ||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 136 gttcttcaagatgctgataagcttgacatttattcattgtcaaggaaatggaaggagttg 195 Query: 275 gttgataaggctcgtgcaaagcagctgcag-ccccaggagtacaactctggtaccttcac 333 ||||||||||| || ||||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 196 gttgataaggcgcgagcaaagcagctgcagcccccatgagtacaactctggcacctttac 255 Query: 334 tctttcaaaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaac 393 |||||| || ||||||||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 256 tctttcgaatcttggtatgtttggagttgataggtttgatgcaatactgccacctggaac 315 Query: 394 tggagcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtag 453 ||| ||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 316 tggcgcaatcatggccgtcggtgcatcagaaccgacagttgttggtacaaaagacggtag 375 Query: 454 aattggg--atcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttat 511 | | || |||||| ||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 376 gaatcggacatcaagagccaaatgcaggtaaatgttaccgctgatcatcgtgttatttat 435 Query: 512 ggatctgatcttgc 525 ||| |||| ||||| Sbjct: 436 ggagctgaccttgc 449
>gb|AY108924.1| Zea mays PCO128534 mRNA sequence Length = 614 Score = 410 bits (207), Expect = e-111 Identities = 422/490 (86%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 53 aagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcat 112 |||||||| ||||||||||| ||| |||| ||||| ||||| ||||||||||| |||||| Sbjct: 95 aagggggttacaatgacagcactgttggctaaggcgacagcaatggcgctggttcagcat 154 Query: 113 cctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatcaac 172 ||||||||||||||||||||||| |||||| ||||||| || |||| |||||| |||||| Sbjct: 155 cctgtggtgaactccagctgcagggatgggaagagcttcacctacagcagtagtatcaac 214 Query: 173 attgctgtggcggtggccatcgatggtggattgataacccccgtgctccaggatgctgat 232 ||||| ||||| |||||||| |||||||| ||||| || || || || || ||||||||| Sbjct: 215 attgccgtggcagtggccatagatggtgggttgattacaccagttcttcaagatgctgat 274 Query: 233 aagcttgatatttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgca 292 |||||||| ||||||||| |||||||||||||||| ||| | ||||||||||| || ||| Sbjct: 275 aagcttgacatttattcattgtcaaggaaatggaaagagttagttgataaggcgcgagca 334 Query: 293 aagcagctgcagccccaggagtacaactctggtaccttcactctttcaaaccttggtatg 352 |||||| |||||||||| |||||||||||||| || || ||||| || || ||||||||| Sbjct: 335 aagcagttgcagccccatgagtacaactctggcacgtttactctctcgaatcttggtatg 394 Query: 353 tttggagttgatagattcgatgcgatcttgccacctggaact-ggagcaatcatggctgt 411 |||||||||||||| || || || || |||||||||||||| |||||||||||||| || Sbjct: 395 tttggagttgataggtttgacgcaatactgccacctggaactgggagcaatcatggccgt 454 Query: 412 -tggtgcatcacaaccgacagttgttggtacaaaagatggtagaattgggatcaagtgcc 470 || |||||| |||| || ||||||||||||||||||||||||||||||||||| | Sbjct: 455 cgggggcatcagaacccaccattgttggtacaaaagatggtagaattgggatcaagaatc 514 Query: 471 aaatgcaggtcaatgttactgctgat-catcgtgttatttatggatctgatcttgccgcc 529 |||||||||| |||||||| || ||| || | | |||||||||| |||| ||||| || Sbjct: 515 aaatgcaggtaaatgttaccgccgatccacggggntatttatggagctgaccttgctgct 574 Query: 530 tttctgcaaa 539 |||||||||| Sbjct: 575 tttctgcaaa 584
>gb|AY084265.1| Arabidopsis thaliana clone 101686 mRNA, complete sequence Length = 1702 Score = 174 bits (88), Expect = 2e-40 Identities = 298/368 (80%) Strand = Plus / Plus Query: 158 aacagtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtg 217 ||||||||||||||| ||||||| || || || || |||||||| ||||||| || ||| Sbjct: 996 aacagtagcatcaacgttgctgttgctgttgctattgatggtggtctgataactcctgtg 1055 Query: 218 ctccaggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggtt 277 || ||| | ||||||||| |||| |||||||| | || || |||||||| || ||||| Sbjct: 1056 cttcagaacgctgataaggttgacatttattcgttatctagaaaatggaaagaattggtt 1115 Query: 278 gataaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctt 337 ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1116 gataaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttcactctc 1175 Query: 338 tcaaaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactgga 397 || ||||| || |||||||| |||||| | || ||||| || | || |||||||| ||| Sbjct: 1176 tctaacctaggaatgtttggcgttgatcggtttgatgctattctaccccctggaacagga 1235 Query: 398 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 457 || || |||||||| || ||||| ||||| |||| |||| || ||||| || | ||| Sbjct: 1236 gcgattatggctgtaggagcatctcaaccttcagtggttgcaactaaagacggccgcatt 1295 Query: 458 gggatcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttatggatct 517 || || || ||| |||||||| ||||| || || ||||||||||| || ||||| || Sbjct: 1296 ggcatgaaaaaccagatgcaggtgaatgtgacggcagatcatcgtgtcatctatggtgct 1355 Query: 518 gatcttgc 525 |||||||| Sbjct: 1356 gatcttgc 1363
>ref|NM_103166.2| Arabidopsis thaliana EMB3003; acyltransferase/ dihydrolipoyllysine-residue acetyltransferase/ protein binding AT1G34430 (EMB3003) mRNA, complete cds Length = 1731 Score = 168 bits (85), Expect = 1e-38 Identities = 295/365 (80%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 1034 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 1093 Query: 221 caggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggttgat 280 ||| | ||||||||| |||| |||||||| | || || |||||||| || |||||||| Sbjct: 1094 cagaacgctgataaggttgacatttattcgttatctagaaaatggaaagaattggttgat 1153 Query: 281 aaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctttca 340 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||| || Sbjct: 1154 aaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttcactctctct 1213 Query: 341 aaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactggagca 400 ||||| || |||||||| |||||| | || ||||| || | || |||||||| ||||| Sbjct: 1214 aacctaggaatgtttggcgttgatcggtttgatgctattctaccccctggaacaggagcg 1273 Query: 401 atcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaattggg 460 || |||||||| || ||||| ||||| |||| |||| || ||||| || | ||||| Sbjct: 1274 attatggctgtcggagcatctcaaccttcagtggttgcaactaaagacggccgcattggc 1333 Query: 461 atcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttatggatctgat 520 || || ||| |||||||| ||||| || || ||||||||||| || ||||| ||||| Sbjct: 1334 atgaaaaaccagatgcaggtgaatgtgacggcagatcatcgtgtcatctatggtgctgat 1393 Query: 521 cttgc 525 ||||| Sbjct: 1394 cttgc 1398
>gb|BT001042.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds Length = 1398 Score = 168 bits (85), Expect = 1e-38 Identities = 295/365 (80%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 976 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 1035 Query: 221 caggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggttgat 280 ||| | ||||||||| |||| |||||||| | || || |||||||| || |||||||| Sbjct: 1036 cagaacgctgataaggttgacatttattcgttatctagaaaatggaaagaattggttgat 1095 Query: 281 aaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctttca 340 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||| || Sbjct: 1096 aaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttcactctctct 1155 Query: 341 aaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactggagca 400 ||||| || |||||||| |||||| | || ||||| || | || |||||||| ||||| Sbjct: 1156 aacctaggaatgtttggcgttgatcggtttgatgctattctaccccctggaacaggagcg 1215 Query: 401 atcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaattggg 460 || |||||||| || ||||| ||||| |||| |||| || ||||| || | ||||| Sbjct: 1216 attatggctgtcggagcatctcaaccttcagtggttgcaactaaagacggccgcattggc 1275 Query: 461 atcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttatggatctgat 520 || || ||| |||||||| ||||| || || ||||||||||| || ||||| ||||| Sbjct: 1276 atgaaaaaccagatgcaggtgaatgtgacggcagatcatcgtgtcatctatggtgctgat 1335 Query: 521 cttgc 525 ||||| Sbjct: 1336 cttgc 1340
>gb|AY128294.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds Length = 1645 Score = 168 bits (85), Expect = 1e-38 Identities = 295/365 (80%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 1034 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 1093 Query: 221 caggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggttgat 280 ||| | ||||||||| |||| |||||||| | || || |||||||| || |||||||| Sbjct: 1094 cagaacgctgataaggttgacatttattcgttatctagaaaatggaaagaattggttgat 1153 Query: 281 aaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctttca 340 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||| || Sbjct: 1154 aaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttcactctctct 1213 Query: 341 aaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactggagca 400 ||||| || |||||||| |||||| | || ||||| || | || |||||||| ||||| Sbjct: 1214 aacctaggaatgtttggcgttgatcggtttgatgctattctaccccctggaacaggagcg 1273 Query: 401 atcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaattggg 460 || |||||||| || ||||| ||||| |||| |||| || ||||| || | ||||| Sbjct: 1274 attatggctgtcggagcatctcaaccttcagtggttgcaactaaagacggccgcattggc 1333 Query: 461 atcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttatggatctgat 520 || || ||| |||||||| ||||| || || ||||||||||| || ||||| ||||| Sbjct: 1334 atgaaaaaccagatgcaggtgaatgtgacggcagatcatcgtgtcatctatggtgctgat 1393 Query: 521 cttgc 525 ||||| Sbjct: 1394 cttgc 1398
>emb|BX815718.1|CNS0ACXH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1600 Score = 161 bits (81), Expect = 3e-36 Identities = 294/365 (80%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 1083 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 1142 Query: 221 caggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggttgat 280 ||| | ||||||||| |||| | |||||| | || || |||||||| || |||||||| Sbjct: 1143 cagaacgctgataaggttgacacttattcgttatctagaaaatggaaagaattggttgat 1202 Query: 281 aaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctttca 340 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||| || Sbjct: 1203 aaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttcactctctct 1262 Query: 341 aaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactggagca 400 ||||| || |||||||| |||||| | || ||||| || | || |||||||| ||||| Sbjct: 1263 aacctaggaatgtttggcgttgatcggtttgatgctattctaccccctggaacaggagcg 1322 Query: 401 atcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaattggg 460 || |||||||| || ||||| ||||| |||| |||| || ||||| || | ||||| Sbjct: 1323 attatggctgtcggagcatctcaaccttcagtggttgcaactaaagacggccgcattggc 1382 Query: 461 atcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttatggatctgat 520 || || ||| |||||||| ||||| || || ||||||||||| || ||||| ||||| Sbjct: 1383 atgaaaaaccagatgcaggtgaatgtgacggcagatcatcgtgtcatctatggtgctgat 1442 Query: 521 cttgc 525 ||||| Sbjct: 1443 cttgc 1447
>emb|BX816473.1|CNS0AD0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1564 Score = 161 bits (81), Expect = 3e-36 Identities = 294/365 (80%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 989 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 1048 Query: 221 caggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggttgat 280 ||| | ||||||||| |||| |||||||| | || || |||||||| || |||||||| Sbjct: 1049 cagaacgctgataaggttgacatttattcgttatctagaaaatggaaagaattggttgat 1108 Query: 281 aaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctttca 340 |||||||| || |||||||||||||| |||||||||||| |||||||||| ||||| || Sbjct: 1109 aaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttaactctctct 1168 Query: 341 aaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactggagca 400 ||||| || |||||||| |||||| | || ||||| || | || |||||||| ||||| Sbjct: 1169 aacctaggaatgtttggcgttgatcggtttgatgctattctaccccctggaacaggagcg 1228 Query: 401 atcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaattggg 460 || |||||||| || ||||| ||||| |||| |||| || ||||| || | ||||| Sbjct: 1229 attatggctgtcggagcatctcaaccttcagtggttgcaactaaagacggccgcattggc 1288 Query: 461 atcaagtgccaaatgcaggtcaatgttactgctgatcatcgtgttatttatggatctgat 520 || || ||| |||||||| ||||| || || ||||||||||| || ||||| ||||| Sbjct: 1289 atgaaaaaccagatgcaggtgaatgtgacggcagatcatcgtgtcatctatggtgctgat 1348 Query: 521 cttgc 525 ||||| Sbjct: 1349 cttgc 1353
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Minus Query: 53 aagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcat 112 ||||| ||||||||| | || ||| |||| ||||| || || |||||||| ||||| || Sbjct: 4174841 aagggtgtgacaatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacac 4174782 Query: 113 cctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatcaac 172 || || | ||||||||||||||||||||| ||||||| ||||||||||| ||||| ||| Sbjct: 4174781 ccggttataaactccagctgcagagatgggaagagcttcacttacaacagcagcataaac 4174722 Query: 173 attgctgtggcggtggccatcgatggtggattgataacccccgtgctccaggatgctgat 232 || |||||||| ||||||||||||||||| ||||| || || ||||| | ||||||||| Sbjct: 4174721 atcgctgtggcagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgat 4174662 Query: 233 aag 235 ||| Sbjct: 4174661 aag 4174659 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 398 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 457 ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||| Sbjct: 4171594 gcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtatt 4171535 Query: 458 gggatcaagtgccaaatgcaggt 480 ||||||||| |||||||||||| Sbjct: 4171534 gggatcaagaaccaaatgcaggt 4171512 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 326 accttcactctttcaaaccttggtatgtttggagttgatagattcgatgcgatcttgcca 385 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 4171756 acctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgcca 4171697 Query: 386 cctggaactg 395 |||||||||| Sbjct: 4171696 cctggaactg 4171687 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 477 aggtcaatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgc 536 ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 4171419 aggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgc 4171360 Query: 537 aaa 539 ||| Sbjct: 4171359 aaa 4171357 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 242 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagctg 301 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 4174563 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 4174504 Query: 302 cagccccaggagtacaactctggtac 327 |||||||| || ||||| |||||||| Sbjct: 4174503 cagccccatgaatacaattctggtac 4174478 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 2 tacaccatcacaaccgatgctctcgatgcactctac 37 |||||| |||||||||||||||| |||||||||||| Sbjct: 4174980 tacaccttcacaaccgatgctctggatgcactctac 4174945
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Minus Query: 53 aagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcat 112 ||||| ||||||||| | || ||| |||| ||||| || || |||||||| ||||| || Sbjct: 4174828 aagggtgtgacaatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacac 4174769 Query: 113 cctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatcaac 172 || || | ||||||||||||||||||||| ||||||| ||||||||||| ||||| ||| Sbjct: 4174768 ccggttataaactccagctgcagagatgggaagagcttcacttacaacagcagcataaac 4174709 Query: 173 attgctgtggcggtggccatcgatggtggattgataacccccgtgctccaggatgctgat 232 || |||||||| ||||||||||||||||| ||||| || || ||||| | ||||||||| Sbjct: 4174708 atcgctgtggcagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgat 4174649 Query: 233 aag 235 ||| Sbjct: 4174648 aag 4174646 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 398 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 457 ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||| Sbjct: 4171581 gcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtatt 4171522 Query: 458 gggatcaagtgccaaatgcaggt 480 ||||||||| |||||||||||| Sbjct: 4171521 gggatcaagaaccaaatgcaggt 4171499 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 326 accttcactctttcaaaccttggtatgtttggagttgatagattcgatgcgatcttgcca 385 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 4171743 acctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgcca 4171684 Query: 386 cctggaactg 395 |||||||||| Sbjct: 4171683 cctggaactg 4171674 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 477 aggtcaatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgc 536 ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 4171406 aggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgc 4171347 Query: 537 aaa 539 ||| Sbjct: 4171346 aaa 4171344 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 242 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagctg 301 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 4174550 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 4174491 Query: 302 cagccccaggagtacaactctggtac 327 |||||||| || ||||| |||||||| Sbjct: 4174490 cagccccatgaatacaattctggtac 4174465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 2 tacaccatcacaaccgatgctctcgatgcactctac 37 |||||| |||||||||||||||| |||||||||||| Sbjct: 4174967 tacaccttcacaaccgatgctctggatgcactctac 4174932
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Minus Query: 53 aagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagcat 112 ||||| ||||||||| | || ||| |||| ||||| || || |||||||| ||||| || Sbjct: 117237 aagggtgtgacaatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacac 117178 Query: 113 cctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatcaac 172 || || | ||||||||||||||||||||| ||||||| ||||||||||| ||||| ||| Sbjct: 117177 ccggttataaactccagctgcagagatgggaagagcttcacttacaacagcagcataaac 117118 Query: 173 attgctgtggcggtggccatcgatggtggattgataacccccgtgctccaggatgctgat 232 || |||||||| ||||||||||||||||| ||||| || || ||||| | ||||||||| Sbjct: 117117 atcgctgtggcagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgat 117058 Query: 233 aag 235 ||| Sbjct: 117057 aag 117055 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 398 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 457 ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||| Sbjct: 113990 gcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtatt 113931 Query: 458 gggatcaagtgccaaatgcaggt 480 ||||||||| |||||||||||| Sbjct: 113930 gggatcaagaaccaaatgcaggt 113908 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 326 accttcactctttcaaaccttggtatgtttggagttgatagattcgatgcgatcttgcca 385 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 114152 acctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgcca 114093 Query: 386 cctggaactg 395 |||||||||| Sbjct: 114092 cctggaactg 114083 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 477 aggtcaatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgc 536 ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 113815 aggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgc 113756 Query: 537 aaa 539 ||| Sbjct: 113755 aaa 113753 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 242 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgtgcaaagcagctg 301 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 116959 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 116900 Query: 302 cagccccaggagtacaactctggtac 327 |||||||| || ||||| |||||||| Sbjct: 116899 cagccccatgaatacaattctggtac 116874 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 2 tacaccatcacaaccgatgctctcgatgcactctac 37 |||||| |||||||||||||||| |||||||||||| Sbjct: 117376 tacaccttcacaaccgatgctctggatgcactctac 117341
>emb|BX815624.1|CNS0ACU2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 123 bits (62), Expect = 6e-25 Identities = 215/266 (80%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| | ||||| || || || || |||||||| ||||| || || ||||| Sbjct: 1045 agtagcatcaacgtcgctgtcgctgttgctattgatggtggcttgatcactccggtgctt 1104 Query: 221 caggatgctgataagcttgatatttattcactgtcaaggaaatggaaggagctggttgat 280 ||| | ||||||||| |||| | | |||| | || || |||||||| || |||||||| Sbjct: 1105 cagaacgctgataaggttgacactcattcgttatctagaaaatggaaagaattggttgat 1164 Query: 281 aaggctcgtgcaaagcagctgcagccccaggagtacaactctggtaccttcactctttca 340 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||| || Sbjct: 1165 aaggctcgagccaagcagctgcagcctcaggagtacaacactggtaccttcactctctct 1224 Query: 341 aaccttggtatgtttggagttgatagattcgatgcgatcttgccacctggaactggagca 400 ||||| || || ||||| |||||| | | ||||| || | || |||||||| ||||| Sbjct: 1225 aacctaggaatctttggcgttgatcggtctgatgctattctaccccctggaacaggagcg 1284 Query: 401 atcatggctgttggtgcatcacaacc 426 || |||||||| || ||||| ||||| Sbjct: 1285 attatggctgtcggagcatctcaacc 1310
>ref|XM_482526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1755 Score = 121 bits (61), Expect = 2e-24 Identities = 259/325 (79%) Strand = Plus / Plus Query: 51 caaagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagc 110 ||||||||||||| ||||||| |||||||| ||||| |||| ||||| || | ||||| Sbjct: 985 caaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagc 1044 Query: 111 atcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatca 170 | || |||||||| | |||||||| |||||| ||||||| |||||||||| | ||||| Sbjct: 1045 acccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatca 1104 Query: 171 acattgctgtggcggtggccatcgatggtggattgataacccccgtgctccaggatgctg 230 |||| || ||||| || || ||||||||||| | || || || || || ||||||||| Sbjct: 1105 acatcgcggtggctgtcgcaatcgatggtgggctcattacacctgttctggaggatgctg 1164 Query: 231 ataagcttgatatttattcactgtcaaggaaatggaaggagctggttgataaggctcgtg 290 ||||| | ||||| |||| || ||| ||||||||||| || || | || ||||||| Sbjct: 1165 ataagttggatatatatttgctctcacaaaaatggaaggaactagtcaagaaagctcgtg 1224 Query: 291 caaagcagctgcagccccaggagtacaactctggtaccttcactctttcaaaccttggta 350 |||| ||||| || || | ||||||| |||||| || || || || |||||| | |||| Sbjct: 1225 caaaacagctccaaccaaatgagtacagctctgggacatttacactgtcaaacttgggta 1284 Query: 351 tgtttggagttgatagattcgatgc 375 ||||||| ||||||||||| ||||| Sbjct: 1285 tgtttggtgttgatagatttgatgc 1309
>dbj|AK070015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040H11, full insert sequence Length = 1754 Score = 121 bits (61), Expect = 2e-24 Identities = 259/325 (79%) Strand = Plus / Plus Query: 51 caaagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagc 110 ||||||||||||| ||||||| |||||||| ||||| |||| ||||| || | ||||| Sbjct: 984 caaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagc 1043 Query: 111 atcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatca 170 | || |||||||| | |||||||| |||||| ||||||| |||||||||| | ||||| Sbjct: 1044 acccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatca 1103 Query: 171 acattgctgtggcggtggccatcgatggtggattgataacccccgtgctccaggatgctg 230 |||| || ||||| || || ||||||||||| | || || || || || ||||||||| Sbjct: 1104 acatcgcggtggctgtcgcaatcgatggtgggctcattacacctgttctggaggatgctg 1163 Query: 231 ataagcttgatatttattcactgtcaaggaaatggaaggagctggttgataaggctcgtg 290 ||||| | ||||| |||| || ||| ||||||||||| || || | || ||||||| Sbjct: 1164 ataagttggatatatatttgctctcacaaaaatggaaggaactagtcaagaaagctcgtg 1223 Query: 291 caaagcagctgcagccccaggagtacaactctggtaccttcactctttcaaaccttggta 350 |||| ||||| || || | ||||||| |||||| || || || || |||||| | |||| Sbjct: 1224 caaaacagctccaaccaaatgagtacagctctgggacatttacactgtcaaacttgggta 1283 Query: 351 tgtttggagttgatagattcgatgc 375 ||||||| ||||||||||| ||||| Sbjct: 1284 tgtttggtgttgatagatttgatgc 1308
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 6e-16 Identities = 125/151 (82%) Strand = Plus / Minus Query: 51 caaagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagc 110 ||||||||||||| ||||||| |||||||| ||||| |||| ||||| || | ||||| Sbjct: 20853929 caaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagc 20853870 Query: 111 atcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatca 170 | || |||||||| | |||||||| |||||| ||||||| |||||||||| | ||||| Sbjct: 20853869 acccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatca 20853810 Query: 171 acattgctgtggcggtggccatcgatggtgg 201 |||| || ||||| || || ||||||||||| Sbjct: 20853809 acatcgcggtggctgtcgcaatcgatggtgg 20853779 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 338 tcaaaccttggtatgtttggagttgatagattcgatgc 375 |||||| | ||||||||||| ||||||||||| ||||| Sbjct: 20853467 tcaaacttgggtatgtttggtgttgatagatttgatgc 20853430
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 93.7 bits (47), Expect = 6e-16 Identities = 125/151 (82%) Strand = Plus / Minus Query: 51 caaagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagc 110 ||||||||||||| ||||||| |||||||| ||||| |||| ||||| || | ||||| Sbjct: 32230 caaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagc 32171 Query: 111 atcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatca 170 | || |||||||| | |||||||| |||||| ||||||| |||||||||| | ||||| Sbjct: 32170 acccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatca 32111 Query: 171 acattgctgtggcggtggccatcgatggtgg 201 |||| || ||||| || || ||||||||||| Sbjct: 32110 acatcgcggtggctgtcgcaatcgatggtgg 32080 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 338 tcaaaccttggtatgtttggagttgatagattcgatgc 375 |||||| | ||||||||||| ||||||||||| ||||| Sbjct: 31768 tcaaacttgggtatgtttggtgttgatagatttgatgc 31731
>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1124_B05 Length = 109917 Score = 93.7 bits (47), Expect = 6e-16 Identities = 125/151 (82%) Strand = Plus / Minus Query: 51 caaagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctggtgcagc 110 ||||||||||||| ||||||| |||||||| ||||| |||| ||||| || | ||||| Sbjct: 85062 caaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagc 85003 Query: 111 atcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagcatca 170 | || |||||||| | |||||||| |||||| ||||||| |||||||||| | ||||| Sbjct: 85002 acccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatca 84943 Query: 171 acattgctgtggcggtggccatcgatggtgg 201 |||| || ||||| || || ||||||||||| Sbjct: 84942 acatcgcggtggctgtcgcaatcgatggtgg 84912 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 338 tcaaaccttggtatgtttggagttgatagattcgatgc 375 |||||| | ||||||||||| ||||||||||| ||||| Sbjct: 84600 tcaaacttgggtatgtttggtgttgatagatttgatgc 84563
>ref|NM_113489.2| Arabidopsis thaliana LTA2 (PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE); acyltransferase/ dihydrolipoyllysine-residue acetyltransferase/ protein bi> AT3G25860 (LTA2) mRNA, complete cds Length = 1717 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 1039 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 1098 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 1099 attaacattgcagtggcggttgctatcaatggtgg 1133 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 1237 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 1296 Query: 365 agatt 369 ||||| Sbjct: 1297 agatt 1301
>gb|AY045935.1| Arabidopsis thaliana putative dihydrolipoamide S-acetyltransferase (At3g25860) mRNA, partial cds Length = 1338 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 634 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 693 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 694 attaacattgcagtggcggttgctatcaatggtgg 728 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 832 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 891 Query: 365 agatt 369 ||||| Sbjct: 892 agatt 896
>gb|AY037262.1| Arabidopsis thaliana AT3g25860/MPE11_1 mRNA, complete cds Length = 1710 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 1039 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 1098 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 1099 attaacattgcagtggcggttgctatcaatggtgg 1133 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 1237 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 1296 Query: 365 agatt 369 ||||| Sbjct: 1297 agatt 1301
>emb|BX822783.1|CNS0A4PC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZA03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1660 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 1025 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 1084 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 1085 attaacattgcagtggcggttgctatcaatggtgg 1119 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 1223 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 1282 Query: 365 agatt 369 ||||| Sbjct: 1283 agatt 1287
>gb|BT002343.1| Arabidopsis thaliana clone C104935 putative dihydrolipoamide S-acetyltransferase (At3g25860) mRNA, complete cds Length = 1474 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 967 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 1026 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 1027 attaacattgcagtggcggttgctatcaatggtgg 1061 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 1165 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 1224 Query: 365 agatt 369 ||||| Sbjct: 1225 agatt 1229
>dbj|AB023041.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11 Length = 83650 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 2611 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 2670 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 2671 attaacattgcagtggcggttgctatcaatggtgg 2705
>gb|AF066079.1|AF066079 Arabidopsis thaliana dihydrolipoamide S-acetyltransferase (LTA2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1714 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| |||| |||||| |||||| Sbjct: 1025 cagcatcctgtggtgaacgctagctgcaaagacgggaagagttttagttacaatagtagc 1084 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 1085 attaacattgcagtggcggttgctatcaatggtgg 1119 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 1223 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 1282 Query: 365 agatt 369 ||||| Sbjct: 1283 agatt 1287
>gb|AY111087.1| Zea mays CL10585_1 mRNA sequence Length = 891 Score = 79.8 bits (40), Expect = 8e-12 Identities = 163/204 (79%) Strand = Plus / Minus Query: 45 ttaaggcaaagggggtgacaatgacagcgctgctggcaaaggctacagcgatggcgctgg 104 ||||| ||||||| ||||||||||||| |||| |||| |||||| |||| ||||| || | Sbjct: 785 ttaagccaaagggagtgacaatgacagtgctgttggcgaaggctgcagccatggctcttg 726 Query: 105 tgcagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagta 164 ||||| ||||| || || | |||||| ||||| ||||||| || |||||||||| Sbjct: 725 cacagcaccctgttgtcaatagtacctgcagggatggaaagagcttcacatacaacagta 666 Query: 165 gcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctccagg 224 ||||||||||| ||||| ||||| || |||||||| | || || || || || |||| Sbjct: 665 atatcaacattgcagtggctgtggcaattgatggtggccttattacacctgtccttcagg 606 Query: 225 atgctgataagcttgatatttatt 248 |||| || ||||| |||||||||| Sbjct: 605 atgcagacaagctggatatttatt 582 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 462 tcaagtgccaaatgcaggtcaatgttactgctgatca 498 ||||| || |||||| ||||||||| ||||||||||| Sbjct: 368 tcaagagcaaaatgctggtcaatgtcactgctgatca 332
>emb|BX823568.1|CNS0A5BH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1663 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 107 cagcatcctgtggtgaactccagctgcagagatgggcagagctttacttacaacagtagc 166 |||||||||||||||||| | ||||||| ||| ||| |||| ||| |||||| |||||| Sbjct: 1023 cagcatcctgtggtgaacgctagctgcaaagacgggaagagtcttagttacaatagtagc 1082 Query: 167 atcaacattgctgtggcggtggccatcgatggtgg 201 || |||||||| |||||||| || ||| ||||||| Sbjct: 1083 attaacattgcagtggcggttgctatcaatggtgg 1117 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctggtaccttcactctttcaaaccttggtatgtttggagttgat 364 ||||| || ||||||||||| || || ||| | || || || |||||||||||||| ||| Sbjct: 1221 ccccatgaatacaactctggaacttttactttatcgaatctcggtatgtttggagtggat 1280 Query: 365 agatt 369 ||||| Sbjct: 1281 agatt 1285
>gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence Length = 82214 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 260 aaatggaaggagctggttgataaggctcgtgcaaagcagctgcagccccaggagtacaac 319 |||||||| || |||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 20505 aaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggagtacaac 20564 Query: 320 tctggta 326 |||||| Sbjct: 20565 actggta 20571 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 20315 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 20374 Query: 221 caggatgctgataag 235 ||| | ||||||||| Sbjct: 20375 cagaacgctgataag 20389 Score = 44.1 bits (22), Expect = 0.47 Identities = 37/42 (88%) Strand = Plus / Plus Query: 323 ggtaccttcactctttcaaaccttggtatgtttggagttgat 364 |||||||||||||| || ||||| || |||||||| |||||| Sbjct: 20670 ggtaccttcactctctctaacctaggaatgtttggcgttgat 20711
>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I, complete sequence Length = 117585 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 260 aaatggaaggagctggttgataaggctcgtgcaaagcagctgcagccccaggagtacaac 319 |||||||| || |||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 105224 aaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggagtacaac 105283 Query: 320 tctggta 326 |||||| Sbjct: 105284 actggta 105290 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Plus Query: 161 agtagcatcaacattgctgtggcggtggccatcgatggtggattgataacccccgtgctc 220 |||||||||||| ||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 105034 agtagcatcaacgttgctgttgctgttgctattgatggtggtttgatcactccggtgctt 105093 Query: 221 caggatgctgataag 235 ||| | ||||||||| Sbjct: 105094 cagaacgctgataag 105108 Score = 44.1 bits (22), Expect = 0.47 Identities = 37/42 (88%) Strand = Plus / Plus Query: 323 ggtaccttcactctttcaaaccttggtatgtttggagttgat 364 |||||||||||||| || ||||| || |||||||| |||||| Sbjct: 105389 ggtaccttcactctctctaacctaggaatgtttggcgttgat 105430
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 126 ccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtggc 183 |||||||||| |||||| ||||||| | |||||||||||| ||||||||||||||||| Sbjct: 14401596 ccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggc 14401539 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 347 ggtatgtttggagttgatagattcgatgcgatcttgccacctgg 390 ||||||||||| || |||||||||||||| ||| | |||||||| Sbjct: 14401191 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 14401148 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 caggtcaatgttactgctga 495 |||||||||||||||||||| Sbjct: 14400400 caggtcaatgttactgctga 14400381
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 126 ccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtggc 183 |||||||||| |||||| ||||||| | |||||||||||| ||||||||||||||||| Sbjct: 93399 ccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggc 93342 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 347 ggtatgtttggagttgatagattcgatgcgatcttgccacctgg 390 ||||||||||| || |||||||||||||| ||| | |||||||| Sbjct: 92994 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 92951 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 caggtcaatgttactgctga 495 |||||||||||||||||||| Sbjct: 92203 caggtcaatgttactgctga 92184
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 126 ccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtggc 183 |||||||||| |||||| ||||||| | |||||||||||| ||||||||||||||||| Sbjct: 1161 ccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggc 1104 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 347 ggtatgtttggagttgatagattcgatgcgatcttgccacctgg 390 ||||||||||| || |||||||||||||| ||| | |||||||| Sbjct: 756 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 713
>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full insert sequence Length = 1752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 126 ccagctgcagagatgggcagagctttacttacaacagtagcatcaacattgctgtggc 183 |||||||||| |||||| ||||||| | |||||||||||| ||||||||||||||||| Sbjct: 1116 ccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggc 1173 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 347 ggtatgtttggagttgatagattcgatgcgatcttgccacctgg 390 ||||||||||| || |||||||||||||| ||| | |||||||| Sbjct: 1337 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 1380 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 471 aaatgcaggtcaatgttactgctga 495 |||||| |||||||||||||||||| Sbjct: 1461 aaatgctggtcaatgttactgctga 1485
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 341 aaccttggtatgtttggagttgatagatt 369 ||||||||||||||||||||||||||||| Sbjct: 380688 aaccttggtatgtttggagttgatagatt 380716
>gb|DQ366726.1| Uncultured Prochlorococcus marinus clone HF10-88F10 genomic sequence Length = 32924 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 326 accttcactctttcaaaccttggtatgtttggagttgatagatt 369 ||||||||| | || |||||||| |||||||||||||||||||| Sbjct: 20389 accttcactttatctaaccttgggatgtttggagttgatagatt 20346
>gb|AC158592.4| Mus musculus 10 BAC RP23-198D4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196286 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 386 cctggaactggagcaatcatggctgt 411 |||||||||||||| ||||||||||| Sbjct: 167910 cctggaactggagctatcatggctgt 167935
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 atcaacattgctgtggcggtggccat 192 ||||||||||| |||||||||||||| Sbjct: 750018 atcaacattgccgtggcggtggccat 750043
>gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174480 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 cctggaactggagcaatcatggctgt 411 |||||||||||||| ||||||||||| Sbjct: 109320 cctggaactggagctatcatggctgt 109295
>emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 in linkage group 16, complete sequence Length = 252671 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 accgacagttgttggtacaaa 444 ||||||||||||||||||||| Sbjct: 169756 accgacagttgttggtacaaa 169776
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 aaccttggtatgtttggagtt 361 ||||||||||||||||||||| Sbjct: 29761806 aaccttggtatgtttggagtt 29761786
>dbj|AK102463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D16, full insert sequence Length = 1591 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 aaccttggtatgtttggagtt 361 ||||||||||||||||||||| Sbjct: 772 aaccttggtatgtttggagtt 752
>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete sequence Length = 121689 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tcaaggaaatggaaggagctg 274 ||||||||||||||||||||| Sbjct: 37083 tcaaggaaatggaaggagctg 37103
>dbj|AP001978.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-258O13, complete sequence Length = 161602 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tcaaggaaatggaaggagctg 274 ||||||||||||||||||||| Sbjct: 141388 tcaaggaaatggaaggagctg 141408
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 aaccttggtatgtttggagtt 361 ||||||||||||||||||||| Sbjct: 42732 aaccttggtatgtttggagtt 42712
>ref|NM_113616.2| Arabidopsis thaliana oligopeptide transporter AT3G27020 mRNA, complete cds Length = 2471 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atcaacattgctgtggcggt 186 |||||||||||||||||||| Sbjct: 729 atcaacattgctgtggcggt 710
>gb|AY810465.1| Schistosoma japonicum SJCHGC06930 protein mRNA, partial cds Length = 621 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gttgttggtacaaaagatgg 450 |||||||||||||||||||| Sbjct: 37 gttgttggtacaaaagatgg 56
>gb|AY570737.1| Schistosoma japonicum egg protein CP1084 (CP1084) mRNA, complete cds Length = 1027 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gttgttggtacaaaagatgg 450 |||||||||||||||||||| Sbjct: 427 gttgttggtacaaaagatgg 446
>gb|AY515564.1| Arabidopsis thaliana metal-nicotianamine transporter YSL6 (At3g27020) mRNA, complete cds Length = 2327 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atcaacattgctgtggcggt 186 |||||||||||||||||||| Sbjct: 640 atcaacattgctgtggcggt 621
>emb|AM085148.1| Poicephalus robustus robustus microsatellite DNA, clone CP13A07 Length = 259 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 tctttcaaaccttggtatgtttgg 357 |||||||||||||||||| ||||| Sbjct: 231 tctttcaaaccttggtatctttgg 208
>gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly factor) (MNAT1) gene, complete cds Length = 237446 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 aaaagatggtagaattggga 461 |||||||||||||||||||| Sbjct: 66346 aaaagatggtagaattggga 66365
>gb|AC117189.3| Mus musculus BAC clone RP23-44D2 from 8, complete sequence Length = 165254 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ccccaggagtacaactctgg 324 |||||||||||||||||||| Sbjct: 54901 ccccaggagtacaactctgg 54920
>gb|AC116679.9| Mus musculus chromosome 12, clone RP23-391I19, complete sequence Length = 261992 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctgcagagatgggcagagct 149 |||||||||||||||||||| Sbjct: 207012 ctgcagagatgggcagagct 206993
>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a novel gene, part of a novel gene (LOC284757) and a CpG island, complete sequence Length = 118873 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 attgggatcaagtgccaaat 474 |||||||||||||||||||| Sbjct: 32551 attgggatcaagtgccaaat 32570
>emb|AL109947.19|HSJ919F19 Human DNA sequence from clone RP5-919F19 on chromosome 6q16.3-22.1 Contains the PPIL6 gene for peptidylprolyl isomerase (cyclophilin)-like 6 protein, the SMPD2 gene for sphingomyelin phosphodiesterase 2 neutral membrane (neutral sphingomyelinase), the MICAL1 gene for microtubule associated monoxygenase, calponin and LIM domain containing 1, the ZNF450 gene for zinc finger protein 450 and three CpG islands, complete sequence Length = 128960 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 tgcaaagcagctgcagccccagga 312 |||||||||||||||||| ||||| Sbjct: 48488 tgcaaagcagctgcagcctcagga 48465
>ref|XM_970504.1| PREDICTED: Tribolium castaneum similar to CG10795-PA (LOC664503), mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 atgtttggagttgatagatt 369 |||||||||||||||||||| Sbjct: 498 atgtttggagttgatagatt 517
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 atgctgataagcttgatatt 244 |||||||||||||||||||| Sbjct: 927114 atgctgataagcttgatatt 927095
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome Length = 1499920 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 atgctgataagcttgatatt 244 |||||||||||||||||||| Sbjct: 921948 atgctgataagcttgatatt 921929
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 atgctgataagcttgatatt 244 |||||||||||||||||||| Sbjct: 947832 atgctgataagcttgatatt 947813
>gb|AY120725.1| Arabidopsis thaliana unknown protein (At3g27010) mRNA, complete cds Length = 2389 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atcaacattgctgtggcggt 186 |||||||||||||||||||| Sbjct: 648 atcaacattgctgtggcggt 629
>dbj|AK084611.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330021H01 product:unclassifiable, full insert sequence Length = 4136 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tgcaaagcagctgcagcccc 308 |||||||||||||||||||| Sbjct: 2695 tgcaaagcagctgcagcccc 2676
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 acagttgttggtacaaaaga 447 |||||||||||||||||||| Sbjct: 8018078 acagttgttggtacaaaaga 8018097
>emb|BX823881.1|CNS0A4V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2342 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atcaacattgctgtggcggt 186 |||||||||||||||||||| Sbjct: 684 atcaacattgctgtggcggt 665
>gb|AY087380.1| Arabidopsis thaliana clone 34773 mRNA, complete sequence Length = 2415 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atcaacattgctgtggcggt 186 |||||||||||||||||||| Sbjct: 729 atcaacattgctgtggcggt 710
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 attgctgtggcggtggccat 192 |||||||||||||||||||| Sbjct: 1329617 attgctgtggcggtggccat 1329636
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 acagttgttggtacaaaaga 447 |||||||||||||||||||| Sbjct: 125596 acagttgttggtacaaaaga 125615
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 acagttgttggtacaaaaga 447 |||||||||||||||||||| Sbjct: 41847 acagttgttggtacaaaaga 41866
>dbj|AK160384.1| Homo sapiens mRNA for FLJ00407 protein Length = 4329 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tgcaaagcagctgcagccccagga 312 |||||||||||||||||| ||||| Sbjct: 2466 tgcaaagcagctgcagcctcagga 2489
>dbj|AB026649.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOJ10 Length = 73686 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 atcaacattgctgtggcggt 186 |||||||||||||||||||| Sbjct: 30300 atcaacattgctgtggcggt 30319
>dbj|AK024500.1| Homo sapiens mRNA for FLJ00109 protein, partial cds Length = 4407 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tgcaaagcagctgcagccccagga 312 |||||||||||||||||| ||||| Sbjct: 735 tgcaaagcagctgcagcctcagga 758
>emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7, COMPLETE SEQUENCE Length = 115553 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ataagcttgatatttattca 250 |||||||||||||||||||| Sbjct: 21627 ataagcttgatatttattca 21608
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tggtgcagcatcctgtggtg 121 |||||||||||||||||||| Sbjct: 136456 tggtgcagcatcctgtggtg 136437
>gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gacagttgttggtacaaaag 446 |||||||||||||||||||| Sbjct: 32667 gacagttgttggtacaaaag 32648
>emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-307P22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191464 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 aaaagatggtagaattggga 461 |||||||||||||||||||| Sbjct: 62020 aaaagatggtagaattggga 62001
>dbj|AP001691.1| Homo sapiens genomic DNA, chromosome 21q, section 35/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ggtggccatcgatggtggat 203 |||||||||||||||||||| Sbjct: 165320 ggtggccatcgatggtggat 165301
>dbj|AP000948.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B53P19, LL56-APP region, complete sequence Length = 79834 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ggtggccatcgatggtggat 203 |||||||||||||||||||| Sbjct: 67140 ggtggccatcgatggtggat 67121 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,613,423 Number of Sequences: 3902068 Number of extensions: 4613423 Number of successful extensions: 92615 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92211 Number of HSP's gapped (non-prelim): 392 length of query: 539 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 516 effective length of database: 17,143,297,704 effective search space: 8845941615264 effective search space used: 8845941615264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
