ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37l16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
2dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
3dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mR... 511 e-142
4ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predic... 509 e-141
5gb|AY107400.1| Zea mays PCO125916 mRNA sequence 446 e-122
6dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
7gb|BT016822.1| Zea mays clone Contig655 mRNA sequence 377 e-101
8gb|AY104803.1| Zea mays PCO064157 mRNA sequence 377 e-101
9emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4,... 190 3e-45
10emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 190 3e-45
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
12emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 190 3e-45
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
14dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
15dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
16ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 ... 123 7e-25
17ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 ... 123 7e-25
18gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 ... 123 7e-25
19gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence 123 7e-25
20gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884)... 123 7e-25
21gb|AY093269.1| Arabidopsis thaliana putative proteasome regulato... 123 7e-25
22gb|AY054500.1| Arabidopsis thaliana putative proteasome regulato... 123 7e-25
23gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete s... 123 7e-25
24emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Co... 115 2e-22
25emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 96 1e-16
26emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC... 96 1e-16
27gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory ... 74 5e-10
28emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
29gb|DQ087931.1| Larix potaninii probable 26S proteasome regulator... 66 1e-07
30gb|DQ087930.1| Larix griffithiana probable 26S proteasome regula... 66 1e-07
31gb|DQ087929.1| Larix mastersiana probable 26S proteasome regulat... 66 1e-07
32gb|DQ087928.1| Larix gmelinii probable 26S proteasome regulatory... 66 1e-07
33gb|DQ087927.1| Larix occidentalis probable 26S proteasome regula... 66 1e-07
34gb|DQ087925.1| Larix sibirica probable 26S proteasome regulatory... 66 1e-07
35gb|DQ087924.1| Larix kaempferi probable 26S proteasome regulator... 66 1e-07
36gb|DQ087923.1| Larix decidua probable 26S proteasome regulatory ... 66 1e-07
37gb|DQ087922.1| Larix laricina probable 26S proteasome regulatory... 66 1e-07
38gb|AF051233.1|AF051233 Picea mariana KIAA0107-like protein (Sb46... 56 1e-04
39gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence 48 0.031
40ref|NM_025550.2| Mus musculus proteasome (prosome, macropain) 26... 44 0.49
41gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence 44 0.49
42dbj|AK010287.1| Mus musculus ES cells cDNA, RIKEN full-length en... 44 0.49
43dbj|AK002343.1| Mus musculus adult male kidney cDNA, RIKEN full-... 44 0.49
44gb|BC006869.1| Mus musculus proteasome (prosome, macropain) 26S ... 44 0.49
45gb|AC154515.2| Mus musculus BAC clone RP24-81I13 from chromosome... 44 0.49
46dbj|AK211149.1| Mus musculus cDNA, clone:Y2G0120M22, strand:plus... 44 0.49
47dbj|AK206699.1| Mus musculus cDNA, clone:Y2G0105K15, strand:plus... 44 0.49
48dbj|AK183447.1| Mus musculus cDNA, clone:Y0G0125O22, strand:minu... 44 0.49
49dbj|AK178742.1| Mus musculus cDNA, clone:Y0G0107M03, strand:plus... 44 0.49
50emb|AJ252147.1|MMU252147 Mus musculus mRNA for putative KIAA0107... 44 0.49
51gb|BC108599.1| Xenopus laevis cDNA clone MGC:131117 IMAGE:798324... 42 1.9
52emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chro... 42 1.9
53dbj|AK033468.1| Mus musculus adult male colon cDNA, RIKEN full-l... 42 1.9
54gb|U42580.4|PBU42580 Paramecium bursaria Chlorella virus 1, comp... 40 7.6
55gb|AC131329.13| Mus musculus chromosome 13, clone RP23-474B11, c... 40 7.6
56gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 7.6
57gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, co... 40 7.6
58gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, comp... 40 7.6
59emb|AL138897.10| Human DNA sequence from clone RP11-231D11 on ch... 40 7.6
60emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30 40 7.6
61emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 7.6
62gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosom... 40 7.6
63gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds 40 7.6
64gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence 40 7.6
65gb|AC148053.3| Carollia perspicillata clone 594J14, complete seq... 40 7.6
66dbj|AP006147.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 7.6
67gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 40 7.6 
>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full
            insert sequence
          Length = 1510

 Score =  511 bits (258), Expect = e-142
 Identities = 408/458 (89%)
 Strand = Plus / Plus

                                                                        
Query: 26   aaaggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcgga 85
            |||||||||||| |||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 835  aaaggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctga 894

                                                                        
Query: 86   atttctcaattccctctacgattgtcagtacaagtcattttttgtggcattctctggcct 145
             |||||||| ||||||||| |||| |||||||||||||||||||  |||||||||||| |
Sbjct: 895  gtttctcaactccctctacaattgccagtacaagtcattttttgccgcattctctggctt 954

                                                                        
Query: 146  gacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttcatgcgtga 205
            |||||||||||||||||||||||| ||| |||| || |||||||| |||| |||||||||
Sbjct: 955  gacggagcagatcaagttagaccgttacctgcagcctcatttccgttactacatgcgtga 1014

                                                                        
Query: 206  agtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaatggaggc 265
            ||| || |||||||||||||| || ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 1015 agtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacgatggaagc 1074

                                                                        
Query: 266  aatggctgccgcatttggtgtgacagttgatttcatagaccaggaattgtcgcgctttat 325
            ||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 1075 aatggcttctgcatttggtgtgaccgttgatttcatagacctggaattgtcacgcttcat 1134

                                                                        
Query: 326  tgctgctgggaaacttcactgcaagattgataaggttgctggtgtcctggagacgaaccg 385
            ||||||||| || || ||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 1135 tgctgctggaaagctccactgcaagatcgataaggttgcttgcgtcctggagacgaaccg 1194

                                                                        
Query: 386  acctgatgcacggaatgccttctaccagtcgaccatcaagcagggagacttcctgctgaa 445
             ||||||||  | ||||| ||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 1195 gcctgatgccagaaatgctttctaccaggcaaccatcaagcaaggggacttcctgctgaa 1254

                                                  
Query: 446  tcgcatacagaagctgtcgcgagtcattgacctgtagg 483
             ||||| |||||||| || |||||||||||||||||||
Sbjct: 1255 ccgcatccagaagctatcacgagtcattgacctgtagg 1292
to top
>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full
            insert sequence
          Length = 1515

 Score =  511 bits (258), Expect = e-142
 Identities = 408/458 (89%)
 Strand = Plus / Plus

                                                                        
Query: 26   aaaggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcgga 85
            |||||||||||| |||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 840  aaaggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctga 899

                                                                        
Query: 86   atttctcaattccctctacgattgtcagtacaagtcattttttgtggcattctctggcct 145
             |||||||| ||||||||| |||| |||||||||||||||||||  |||||||||||| |
Sbjct: 900  gtttctcaactccctctacaattgccagtacaagtcattttttgccgcattctctggctt 959

                                                                        
Query: 146  gacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttcatgcgtga 205
            |||||||||||||||||||||||| ||| |||| || |||||||| |||| |||||||||
Sbjct: 960  gacggagcagatcaagttagaccgttacctgcagcctcatttccgttactacatgcgtga 1019

                                                                        
Query: 206  agtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaatggaggc 265
            ||| || |||||||||||||| || ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 1020 agtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacgatggaagc 1079

                                                                        
Query: 266  aatggctgccgcatttggtgtgacagttgatttcatagaccaggaattgtcgcgctttat 325
            ||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 1080 aatggcttctgcatttggtgtgaccgttgatttcatagacctggaattgtcacgcttcat 1139

                                                                        
Query: 326  tgctgctgggaaacttcactgcaagattgataaggttgctggtgtcctggagacgaaccg 385
            ||||||||| || || ||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 1140 tgctgctggaaagctccactgcaagatcgataaggttgcttgcgtcctggagacgaaccg 1199

                                                                        
Query: 386  acctgatgcacggaatgccttctaccagtcgaccatcaagcagggagacttcctgctgaa 445
             ||||||||  | ||||| ||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 1200 gcctgatgccagaaatgctttctaccaggcaaccatcaagcaaggggacttcctgctgaa 1259

                                                  
Query: 446  tcgcatacagaagctgtcgcgagtcattgacctgtagg 483
             ||||| |||||||| || |||||||||||||||||||
Sbjct: 1260 ccgcatccagaagctatcacgagtcattgacctgtagg 1297
to top
>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome
            regulatory particle non-ATPase subunit7, complete cds
          Length = 1547

 Score =  511 bits (258), Expect = e-142
 Identities = 408/458 (89%)
 Strand = Plus / Plus

                                                                        
Query: 26   aaaggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcgga 85
            |||||||||||| |||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 798  aaaggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctga 857

                                                                        
Query: 86   atttctcaattccctctacgattgtcagtacaagtcattttttgtggcattctctggcct 145
             |||||||| ||||||||| |||| |||||||||||||||||||  |||||||||||| |
Sbjct: 858  gtttctcaactccctctacaattgccagtacaagtcattttttgccgcattctctggctt 917

                                                                        
Query: 146  gacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttcatgcgtga 205
            |||||||||||||||||||||||| ||| |||| || |||||||| |||| |||||||||
Sbjct: 918  gacggagcagatcaagttagaccgttacctgcagcctcatttccgttactacatgcgtga 977

                                                                        
Query: 206  agtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaatggaggc 265
            ||| || |||||||||||||| || ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 978  agtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacgatggaagc 1037

                                                                        
Query: 266  aatggctgccgcatttggtgtgacagttgatttcatagaccaggaattgtcgcgctttat 325
            ||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 1038 aatggcttctgcatttggtgtgaccgttgatttcatagacctggaattgtcacgcttcat 1097

                                                                        
Query: 326  tgctgctgggaaacttcactgcaagattgataaggttgctggtgtcctggagacgaaccg 385
            ||||||||| || || ||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 1098 tgctgctggaaagctccactgcaagatcgataaggttgcttgcgtcctggagacgaaccg 1157

                                                                        
Query: 386  acctgatgcacggaatgccttctaccagtcgaccatcaagcagggagacttcctgctgaa 445
             ||||||||  | ||||| ||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 1158 gcctgatgccagaaatgctttctaccaggcaaccatcaagcaaggggacttcctgctgaa 1217

                                                  
Query: 446  tcgcatacagaagctgtcgcgagtcattgacctgtagg 483
             ||||| |||||||| || |||||||||||||||||||
Sbjct: 1218 ccgcatccagaagctatcacgagtcattgacctgtagg 1255
to top
>ref|XM_472939.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score =  509 bits (257), Expect = e-141
 Identities = 407/457 (89%)
 Strand = Plus / Plus

                                                                        
Query: 26   aaaggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcgga 85
            |||||||||||| |||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 714  aaaggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctga 773

                                                                        
Query: 86   atttctcaattccctctacgattgtcagtacaagtcattttttgtggcattctctggcct 145
             |||||||| ||||||||| |||| |||||||||||||||||||  |||||||||||| |
Sbjct: 774  gtttctcaactccctctacaattgccagtacaagtcattttttgccgcattctctggctt 833

                                                                        
Query: 146  gacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttcatgcgtga 205
            |||||||||||||||||||||||| ||| |||| || |||||||| |||| |||||||||
Sbjct: 834  gacggagcagatcaagttagaccgttacctgcagcctcatttccgttactacatgcgtga 893

                                                                        
Query: 206  agtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaatggaggc 265
            ||| || |||||||||||||| || ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 894  agtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacgatggaagc 953

                                                                        
Query: 266  aatggctgccgcatttggtgtgacagttgatttcatagaccaggaattgtcgcgctttat 325
            ||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 954  aatggcttctgcatttggtgtgaccgttgatttcatagacctggaattgtcacgcttcat 1013

                                                                        
Query: 326  tgctgctgggaaacttcactgcaagattgataaggttgctggtgtcctggagacgaaccg 385
            ||||||||| || || ||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 1014 tgctgctggaaagctccactgcaagatcgataaggttgcttgcgtcctggagacgaaccg 1073

                                                                        
Query: 386  acctgatgcacggaatgccttctaccagtcgaccatcaagcagggagacttcctgctgaa 445
             ||||||||  | ||||| ||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 1074 gcctgatgccagaaatgctttctaccaggcaaccatcaagcaaggggacttcctgctgaa 1133

                                                 
Query: 446  tcgcatacagaagctgtcgcgagtcattgacctgtag 482
             ||||| |||||||| || ||||||||||||||||||
Sbjct: 1134 ccgcatccagaagctatcacgagtcattgacctgtag 1170
to top
>gb|AY107400.1| Zea mays PCO125916 mRNA sequence
          Length = 1443

 Score =  446 bits (225), Expect = e-122
 Identities = 414/477 (86%)
 Strand = Plus / Plus

                                                                        
Query: 7    accgcgtatctctaaaacaaaaggttgtagacgcacctgagatcctggctgttatcggca 66
            |||| |||||||| ||||||||||||||||| || ||||||||| | || || || ||||
Sbjct: 739  accgtgtatctctgaaacaaaaggttgtagatgcgcctgagatcttagccgtaattggca 798

                                                                        
Query: 67   aagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtcatttt 126
            |||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 799  aagtacctcacctctcagagtttctcaattccctctacaattgccagtacaagtcatttt 858

                                                                        
Query: 127  ttgtggcattctctggcctgacggagcagatcaagttagaccgatacttgcaaccacatt 186
            || | |||||||||||| |||| || |  ||||||||||| || |||||||| || ||||
Sbjct: 859  ttattgcattctctggcttgactgaaccaatcaagttagagcgttacttgcagcctcatt 918

                                                                        
Query: 187  tccgctacttcatgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcataca 246
            | ||||||| ||||||||||||||||||||||||||| || ||||| || || || ||||
Sbjct: 919  ttcgctactacatgcgtgaagtgcgcactgttgtctactcacagtttctggaatcgtaca 978

                                                                        
Query: 247  agagtgtgacaatggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 306
            |||||||||||||||| || |||||||| |||||||| || ||||| || || |||||||
Sbjct: 979  agagtgtgacaatggaagccatggctgctgcatttggcgtcacagtcgactttatagacc 1038

                                                                        
Query: 307  aggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctg 366
            ||||| |||| ||||| ||||| |||||||| || ||||||||||| || || |||||||
Sbjct: 1039 aggaactgtcacgcttcattgccgctgggaagctccactgcaagatagacaaagttgctg 1098

                                                                        
Query: 367  gtgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagc 426
            | ||| |||| |||||||||||||||||  |||| |||||||||||| | ||||||||||
Sbjct: 1099 gcgtcttggaaacgaaccgacctgatgctaggaacgccttctaccaggcaaccatcaagc 1158

                                                                     
Query: 427  agggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 483
            | ||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||||
Sbjct: 1159 aaggagacttcctgctgaaccgcatccagaagctgtcacgagttatcgacctgtagg 1215
to top
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full
            insert sequence
          Length = 1371

 Score =  416 bits (210), Expect = e-113
 Identities = 405/470 (86%)
 Strand = Plus / Plus

                                                                        
Query: 12   gtatctctaaaacaaaaggttgtagacgcacctgagatcctggctgttatcggcaaagta 71
            |||||||||||||||||||| ||||| ||||| || ||  |||| || || |||||||||
Sbjct: 730  gtatctctaaaacaaaaggtggtagatgcaccagaaattttggcagtgattggcaaagta 789

                                                                        
Query: 72   cctcacctctcggaatttctcaattccctctacgattgtcagtacaagtcattttttgtg 131
            ||||| || || || ||||| || ||||| ||| |||| |||||||||||||||||||| 
Sbjct: 790  cctcatctatctgagtttctgaactccctttacaattgccagtacaagtcattttttgtt 849

                                                                        
Query: 132  gcattctctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgc 191
            |||||||||||| ||||||||||||| ||||| || || ||  | || ||  ||||||||
Sbjct: 850  gcattctctggcatgacggagcagattaagttggatcgctatcttcagcctgatttccgc 909

                                                                        
Query: 192  tacttcatgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagt 251
            ||||  ||| | |||||||| || ||||||||||| |||||  | |||||||||||||||
Sbjct: 910  tactatatgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagt 969

                                                                        
Query: 252  gtgacaatggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccaggaa 311
            ||||||||||| || ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 970  gtgacaatggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccaggaa 1029

                                                                        
Query: 312  ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 371
            |||||||| || ||||| |||||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1030 ttgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctggtgtt 1089

                                                                        
Query: 372  ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 431
            |||||||| ||||||||||| ||  ||||||||||||||||  ||||||||||||| || 
Sbjct: 1090 ctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagcaaggg 1149

                                                              
Query: 432  gacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 481
            |||||| ||||||| ||||| ||||| ||||| |||||||||||| ||||
Sbjct: 1150 gacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 1199
to top
>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence
          Length = 1636

 Score =  377 bits (190), Expect = e-101
 Identities = 400/470 (85%)
 Strand = Plus / Plus

                                                                        
Query: 12   gtatctctaaaacaaaaggttgtagacgcacctgagatcctggctgttatcggcaaagta 71
            |||||||| ||||||||||| ||||| ||||| || ||||||||||| || |||||||||
Sbjct: 823  gtatctctgaaacaaaaggtggtagatgcaccagaaatcctggctgtaattggcaaagta 882

                                                                        
Query: 72   cctcacctctcggaatttctcaattccctctacgattgtcagtacaagtcattttttgtg 131
            ||||||||||| || |||||||| ||||| ||| | || ||||| ||||| || || || 
Sbjct: 883  cctcacctctccgagtttctcaactccctgtacaactgccagtataagtcgttcttcgtt 942

                                                                        
Query: 132  gcattctctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgc 191
            ||||| ||||| ||||| ||||| |||||||||||||| ||  | || || |||||||||
Sbjct: 943  gcattttctggtctgacagagcaaatcaagttagaccgttatcttcagcctcatttccgc 1002

                                                                        
Query: 192  tacttcatgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagt 251
            |||| |||| | ||||||||||| || || || || |||||| | |||||||||||||||
Sbjct: 1003 tactacatgagggaagtgcgcaccgtggtatactcacagttcttagagtcatacaagagt 1062

                                                                        
Query: 252  gtgacaatggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccaggaa 311
            ||||||||||| ||||||||  | || || ||||| || ||||||||||| |||||||||
Sbjct: 1063 gtgacaatggaagcaatggccactgcgttcggtgtaactgttgatttcattgaccaggaa 1122

                                                                        
Query: 312  ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 371
             |||| || || ||||| |||||||| || ||||||||||||||||||||||||||||| 
Sbjct: 1123 ctgtcacggttcattgcagctgggaagctgcactgcaagattgataaggttgctggtgtt 1182

                                                                        
Query: 372  ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 431
            |||||||| |||||||||||||   ||||||| ||||||||| ||||||||||||| || 
Sbjct: 1183 ctggagactaaccgacctgatgagaggaatgctttctaccaggcgaccatcaagcaaggg 1242

                                                              
Query: 432  gacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 481
            |||||| ||||||| ||||| |||||||| || || ||||||||||||||
Sbjct: 1243 gacttcttgctgaaccgcatccagaagctttcacgggtcattgacctgta 1292
to top
>gb|AY104803.1| Zea mays PCO064157 mRNA sequence
          Length = 1631

 Score =  377 bits (190), Expect = e-101
 Identities = 400/470 (85%)
 Strand = Plus / Plus

                                                                        
Query: 12   gtatctctaaaacaaaaggttgtagacgcacctgagatcctggctgttatcggcaaagta 71
            |||||||| ||||||||||| ||||| ||||| || ||||||||||| || |||||||||
Sbjct: 838  gtatctctgaaacaaaaggtggtagatgcaccagaaatcctggctgtaattggcaaagta 897

                                                                        
Query: 72   cctcacctctcggaatttctcaattccctctacgattgtcagtacaagtcattttttgtg 131
            ||||||||||| || |||||||| ||||| ||| | || ||||| ||||| || || || 
Sbjct: 898  cctcacctctccgagtttctcaactccctgtacaactgccagtataagtcgttcttcgtt 957

                                                                        
Query: 132  gcattctctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgc 191
            ||||| ||||| ||||| ||||| |||||||||||||| ||  | || || |||||||||
Sbjct: 958  gcattttctggtctgacagagcaaatcaagttagaccgttatcttcagcctcatttccgc 1017

                                                                        
Query: 192  tacttcatgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagt 251
            |||| |||| | ||||||||||| || || || || |||||| | |||||||||||||||
Sbjct: 1018 tactacatgagggaagtgcgcaccgtggtatactcacagttcttagagtcatacaagagt 1077

                                                                        
Query: 252  gtgacaatggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccaggaa 311
            ||||||||||| ||||||||  | || || ||||| || ||||||||||| |||||||||
Sbjct: 1078 gtgacaatggaagcaatggccactgcgttcggtgtaactgttgatttcattgaccaggaa 1137

                                                                        
Query: 312  ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 371
             |||| || || ||||| |||||||| || ||||||||||||||||||||||||||||| 
Sbjct: 1138 ctgtcacggttcattgcagctgggaagctgcactgcaagattgataaggttgctggtgtt 1197

                                                                        
Query: 372  ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 431
            |||||||| |||||||||||||   ||||||| ||||||||| ||||||||||||| || 
Sbjct: 1198 ctggagactaaccgacctgatgagaggaatgctttctaccaggcgaccatcaagcaaggg 1257

                                                              
Query: 432  gacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 481
            |||||| ||||||| ||||| |||||||| || || ||||||||||||||
Sbjct: 1258 gacttcttgctgaaccgcatccagaagctttcacgggtcattgacctgta 1307
to top
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09,
             complete sequence
          Length = 120583

 Score =  190 bits (96), Expect = 3e-45
 Identities = 150/168 (89%)
 Strand = Plus / Plus

                                                                         
Query: 139   ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
             ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| ||
Sbjct: 40685 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 40744

                                                                         
Query: 199   tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
             |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| |
Sbjct: 40745 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 40804

                                                             
Query: 259   tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 306
             |||| ||||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 40805 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 40852



 Score =  182 bits (92), Expect = 8e-43
 Identities = 155/176 (88%)
 Strand = Plus / Plus

                                                                         
Query: 308   ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
             ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||| |
Sbjct: 40958 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgcttg 41017

                                                                         
Query: 368   tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
              ||||||||||||||||| ||||||||  | ||||| ||||||||| | |||||||||||
Sbjct: 41018 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 41077

                                                                     
Query: 428   gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 483
              || |||||||||||||| ||||| |||||||| || |||||||||||||||||||
Sbjct: 41078 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 41133



 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 28    aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 87
             |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || |
Sbjct: 40447 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 40506

                                                                
Query: 88    ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 138
             ||||||| ||||||||| |||| |||||||||||||||||||  |||||||
Sbjct: 40507 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 40557
to top
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
              complete sequence
          Length = 150864

 Score =  190 bits (96), Expect = 3e-45
 Identities = 150/168 (89%)
 Strand = Plus / Plus

                                                                          
Query: 139    ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
              ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| ||
Sbjct: 107498 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 107557

                                                                          
Query: 199    tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
              |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| |
Sbjct: 107558 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 107617

                                                              
Query: 259    tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 306
              |||| ||||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 107618 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 107665



 Score =  182 bits (92), Expect = 8e-43
 Identities = 155/176 (88%)
 Strand = Plus / Plus

                                                                          
Query: 308    ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
              ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||| |
Sbjct: 107771 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgcttg 107830

                                                                          
Query: 368    tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
               ||||||||||||||||| ||||||||  | ||||| ||||||||| | |||||||||||
Sbjct: 107831 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 107890

                                                                      
Query: 428    gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 483
               || |||||||||||||| ||||| |||||||| || |||||||||||||||||||
Sbjct: 107891 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 107946



 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                          
Query: 28     aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 87
              |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || |
Sbjct: 107260 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 107319

                                                                 
Query: 88     ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 138
              ||||||| ||||||||| |||| |||||||||||||||||||  |||||||
Sbjct: 107320 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 107370
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  190 bits (96), Expect = 3e-45
 Identities = 150/168 (89%)
 Strand = Plus / Plus

                                                                            
Query: 139      ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
                ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| ||
Sbjct: 24218273 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 24218332

                                                                            
Query: 199      tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
                |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| |
Sbjct: 24218333 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 24218392

                                                                
Query: 259      tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 306
                |||| ||||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 24218393 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 24218440



 Score =  182 bits (92), Expect = 8e-43
 Identities = 155/176 (88%)
 Strand = Plus / Plus

                                                                            
Query: 308      ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
                ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||| |
Sbjct: 24218546 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgcttg 24218605

                                                                            
Query: 368      tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
                 ||||||||||||||||| ||||||||  | ||||| ||||||||| | |||||||||||
Sbjct: 24218606 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 24218665

                                                                        
Query: 428      gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 483
                 || |||||||||||||| ||||| |||||||| || |||||||||||||||||||
Sbjct: 24218666 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 24218721



 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 28       aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 87
                |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || |
Sbjct: 24218035 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 24218094

                                                                   
Query: 88       ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 138
                ||||||| ||||||||| |||| |||||||||||||||||||  |||||||
Sbjct: 24218095 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 24218145
to top
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete
             sequence
          Length = 59348

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Plus

                                                                         
Query: 308   ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
             ||||||||| ||||| ||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 13001 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgctgg 13060

                                                                         
Query: 368   tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
              ||||||||||||||||| ||||||||  | ||||| ||||||||| | |||||||||||
Sbjct: 13061 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 13120

                                                                     
Query: 428   gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 483
              || |||||||||||||| ||||| |||||||| || |||||||||||||||||||
Sbjct: 13121 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 13176



 Score =  190 bits (96), Expect = 3e-45
 Identities = 150/168 (89%)
 Strand = Plus / Plus

                                                                         
Query: 139   ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
             ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| ||
Sbjct: 12728 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 12787

                                                                         
Query: 199   tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
             |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| |
Sbjct: 12788 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 12847

                                                             
Query: 259   tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 306
             |||| ||||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 12848 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 12895



 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 28    aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 87
             |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || |
Sbjct: 12490 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 12549

                                                                
Query: 88    ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 138
             ||||||| ||||||||| |||| |||||||||||||||||||  |||||||
Sbjct: 12550 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 12600
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  186 bits (94), Expect = 5e-44
 Identities = 154/174 (88%)
 Strand = Plus / Plus

                                                                            
Query: 308      ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
                |||||||||||| || ||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct: 23484801 ggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctgg 23484860

                                                                            
Query: 368      tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
                ||| |||||||| ||||||||||| ||  ||||||||||||||||  |||||||||||||
Sbjct: 23484861 tgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagca 23484920

                                                                      
Query: 428      gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 481
                 || |||||| ||||||| ||||| ||||| ||||| |||||||||||| ||||
Sbjct: 23484921 aggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 23484974



 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                            
Query: 139      ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
                ||||| ||||||||||||| ||||| || || ||  | || || |||||||||||||  |
Sbjct: 23484518 ctggcatgacggagcagattaagttggatcgctatcttcagcctcatttccgctactata 23484577

                                                                            
Query: 199      tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
                || | |||||||| || ||||||||||| |||||  | ||||||||||||||||||||||
Sbjct: 23484578 tgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagtgtgacaa 23484637

                                                                  
Query: 259      tggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccag 308
                |||| || ||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 23484638 tggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccag 23484687



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 63       ggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtca 122
                |||||||||||||| || || || ||||| || ||||| ||| |||| ||||||||||||
Sbjct: 23484347 ggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtacaagtca 23484406

                                
Query: 123      ttttttgtggcattct 138
                |||||||| |||||||
Sbjct: 23484407 ttttttgttgcattct 23484422



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 12       gtatctctaaaacaaaaggt 31
                ||||||||||||||||||||
Sbjct: 23484231 gtatctctaaaacaaaaggt 23484250
to top
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1791_B03
          Length = 166214

 Score =  186 bits (94), Expect = 5e-44
 Identities = 154/174 (88%)
 Strand = Plus / Plus

                                                                         
Query: 308   ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
             |||||||||||| || ||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct: 50484 ggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctgg 50543

                                                                         
Query: 368   tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
             ||| |||||||| ||||||||||| ||  ||||||||||||||||  |||||||||||||
Sbjct: 50544 tgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagca 50603

                                                                   
Query: 428   gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 481
              || |||||| ||||||| ||||| ||||| ||||| |||||||||||| ||||
Sbjct: 50604 aggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 50657



 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                         
Query: 139   ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
             ||||| ||||||||||||| ||||| || || ||  | || || |||||||||||||  |
Sbjct: 50201 ctggcatgacggagcagattaagttggatcgctatcttcagcctcatttccgctactata 50260

                                                                         
Query: 199   tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
             || | |||||||| || ||||||||||| |||||  | ||||||||||||||||||||||
Sbjct: 50261 tgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagtgtgacaa 50320

                                                               
Query: 259   tggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccag 308
             |||| || ||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 50321 tggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccag 50370



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 63    ggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtca 122
             |||||||||||||| || || || ||||| || ||||| ||| |||| ||||||||||||
Sbjct: 50030 ggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtacaagtca 50089

                             
Query: 123   ttttttgtggcattct 138
             |||||||| |||||||
Sbjct: 50090 ttttttgttgcattct 50105



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    gtatctctaaaacaaaaggt 31
             ||||||||||||||||||||
Sbjct: 49914 gtatctctaaaacaaaaggt 49933
to top
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1653_F07, complete sequence
          Length = 110109

 Score =  186 bits (94), Expect = 5e-44
 Identities = 154/174 (88%)
 Strand = Plus / Plus

                                                                          
Query: 308    ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 367
              |||||||||||| || ||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct: 103476 ggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctgg 103535

                                                                          
Query: 368    tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 427
              ||| |||||||| ||||||||||| ||  ||||||||||||||||  |||||||||||||
Sbjct: 103536 tgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagca 103595

                                                                    
Query: 428    gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 481
               || |||||| ||||||| ||||| ||||| ||||| |||||||||||| ||||
Sbjct: 103596 aggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 103649



 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                          
Query: 139    ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 198
              ||||| ||||||||||||| ||||| || || ||  | || || |||||||||||||  |
Sbjct: 103193 ctggcatgacggagcagattaagttggatcgctatcttcagcctcatttccgctactata 103252

                                                                          
Query: 199    tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 258
              || | |||||||| || ||||||||||| |||||  | ||||||||||||||||||||||
Sbjct: 103253 tgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagtgtgacaa 103312

                                                                
Query: 259    tggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccag 308
              |||| || ||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 103313 tggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccag 103362



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                          
Query: 63     ggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtca 122
              |||||||||||||| || || || ||||| || ||||| ||| |||| ||||||||||||
Sbjct: 103022 ggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtacaagtca 103081

                              
Query: 123    ttttttgtggcattct 138
              |||||||| |||||||
Sbjct: 103082 ttttttgttgcattct 103097



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     gtatctctaaaacaaaaggt 31
              ||||||||||||||||||||
Sbjct: 102906 gtatctctaaaacaaaaggt 102925
to top
>ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 transcript variant
            AT4G24820.1 mRNA, complete cds
          Length = 1595

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 1099 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1158

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1159 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1218

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1219 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1268
to top
>ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 transcript variant
            AT4G24820.2 mRNA, complete cds
          Length = 1462

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 1099 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1158

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1159 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1218

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1219 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1268
to top
>gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 (RPN7) mRNA,
            complete cds
          Length = 1421

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 1009 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1068

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1069 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1128

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1129 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1178
to top
>gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence
          Length = 1161

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 973  gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1032

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1033 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1092

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1093 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1142
to top
>gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884) putative proteasome
            regulatory subunit (At4g24820) mRNA, complete cds
          Length = 1443

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 1026 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1085

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1086 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1145

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1146 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1195
to top
>gb|AY093269.1| Arabidopsis thaliana putative proteasome regulatory subunit
            (At4g24820) mRNA, complete cds
          Length = 1446

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 976  gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1035

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1036 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1095

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1096 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1145
to top
>gb|AY054500.1| Arabidopsis thaliana putative proteasome regulatory subunit
            (At4g24820; F6I7.30) mRNA, complete cds
          Length = 1595

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 1099 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1158

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1159 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1218

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1219 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1268
to top
>gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete sequence
          Length = 1482

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 1079 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1138

                                                                        
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 413
            || |||||||| |||||  ||||||| ||||| |||||||||  ||||||  | ||||||
Sbjct: 1139 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1198

                                                              
Query: 414  tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 463
             | || |||||||| || || ||| |||| || || || |||||||||||
Sbjct: 1199 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1248
to top
>emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL13ZB05 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1332

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                        
Query: 294  gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 353
            ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 997  gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1056

                                                      
Query: 354  gataaggttgctggtgtcctggagacgaaccgacctgatgca 395
            || |||||||| |||||  ||||||| ||||| |||||||||
Sbjct: 1057 gacaaggttgcaggtgttttggagacaaaccgtcctgatgca 1098
to top
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                         
Query: 312   ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 371
             ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| ||||| 
Sbjct: 64947 ttgtcgcgcttcattgctgctgggaagcttcactgtaagatagacaaggttgcaggtgtt 64888

                                                                         
Query: 372   ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 431
              ||||||| ||||| |||||||||  ||||||  | |||||| | || |||||||| || 
Sbjct: 64887 ttggagacaaaccgtcctgatgcaaagaatgcactttaccaggcaacaatcaagcaaggg 64828

                                             
Query: 432   gacttcctgctgaatcgcatacagaagctgtc 463
             || ||| |||| || || || |||||||||||
Sbjct: 64827 gatttcttgctaaaccgaatccagaagctgtc 64796
to top
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F6I7 (ESSA project)
          Length = 95185

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                         
Query: 312   ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 371
             ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| ||||| 
Sbjct: 35523 ttgtcgcgcttcattgctgctgggaagcttcactgtaagatagacaaggttgcaggtgtt 35464

                                                                         
Query: 372   ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 431
              ||||||| ||||| |||||||||  ||||||  | |||||| | || |||||||| || 
Sbjct: 35463 ttggagacaaaccgtcctgatgcaaagaatgcactttaccaggcaacaatcaagcaaggg 35404

                                             
Query: 432   gacttcctgctgaatcgcatacagaagctgtc 463
             || ||| |||| || || || |||||||||||
Sbjct: 35403 gatttcttgctaaaccgaatccagaagctgtc 35372
to top
>gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| |||||||||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtgtattcgcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZF12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 487

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 371
           |||||||||||||||||||||||||| |||||||| || ||  | |||||||| ||| | 
Sbjct: 5   ttgtcgcgctttattgctgctgggaagcttcactgtaaaataaacaaggttgcaggtttt 64

                                   
Query: 372 ctggagacgaaccgacctgatgca 395
            ||||||| ||||| |||||||||
Sbjct: 65  ttggagacaaaccgtcctgatgca 88
to top
>gb|DQ087931.1| Larix potaninii probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087930.1| Larix griffithiana probable 26S proteasome regulatory subunit
           (sb46) gene, partial cds
          Length = 861

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087929.1| Larix mastersiana probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087928.1| Larix gmelinii probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087927.1| Larix occidentalis probable 26S proteasome regulatory subunit
           (sb46) gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087925.1| Larix sibirica probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 889

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087924.1| Larix kaempferi probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087923.1| Larix decidua probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|DQ087922.1| Larix laricina probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 171 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 230
           |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| |||
Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275

                                                    
Query: 231 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || || || || ||||||||||| || |||||||| |||||
Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
to top
>gb|AF051233.1|AF051233 Picea mariana KIAA0107-like protein (Sb46) mRNA, partial cds
          Length = 980

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 108 tgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagttagac 167
           ||||| ||||||||||| ||||| || ||  ||||||||||||| || || |  || || 
Sbjct: 325 tgtcaatacaagtcattctttgtcgcctttgctggcctgacggatcaaataagattggat 384

                                                                       
Query: 168 cgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcg 227
           || |||||||| |||||||| || || |  ||| | ||||| || |||||||| ||||| 
Sbjct: 385 cgctacttgcatccacattttcgatattatatgagagaagtccgtactgttgtgtattct 444

                                                       
Query: 228 cagttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           ||||| || || || ||||||||||| || ||||| || |||||
Sbjct: 445 cagtttctagaatcctacaagagtgtaaccatggaagctatggc 488
to top
>gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence
          Length = 1278

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 201/260 (77%)
 Strand = Plus / Plus

                                                                        
Query: 216  gttgtctattcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggctgcc 275
            ||||| ||||| |||||||| ||||| ||||||||||| || || ||||| |||||    
Sbjct: 855  gttgtgtattcccagttcctggagtcctacaagagtgttactattgaggccatggccaag 914

                                                                        
Query: 276  gcatttggtgtgacagttgatttcatagaccaggaattgtcgcgctttattgctgctggg 335
            || ||||| ||| | |  |||||||| |||  |||| | || || || ||||| ||||||
Sbjct: 915  gcttttggggtgtctgaggatttcatcgacttggaactatctcggttcattgcagctggg 974

                                                                        
Query: 336  aaacttcactgcaagattgataaggttgctggtgtcctggagacgaaccgacctgatgca 395
            ||  | || |||||||||||||| || || || ||  |||| || || || |||||||||
Sbjct: 975  aagttgcattgcaagattgataaagtagcaggagtattggaaactaatcgtcctgatgca 1034

                                                                        
Query: 396  cggaatgccttctaccagtcgaccatcaagcagggagacttcctgctgaatcgcatacag 455
              ||||||  | || ||| | || |||||||| || |||||| || |||||||||| || 
Sbjct: 1035 aagaatgctctttatcaggcaactatcaagcaaggggacttcttgttgaatcgcattcaa 1094

                                
Query: 456  aagctgtcgcgagtcattga 475
            ||||| || || ||||||||
Sbjct: 1095 aagctttctcgtgtcattga 1114



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 131/167 (78%)
 Strand = Plus / Plus

                                                                       
Query: 105 gattgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagtta 164
           |||||||| ||||||||||||||    |||||  ||||| ||| |||||| || || || 
Sbjct: 744 gattgtcaatacaagtcatttttctcagcatttgctggcttgatggagcatattaaattg 803

                                                                       
Query: 165 gaccgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctat 224
           || || |||||||||||||| ||| | || |  ||| | || ||  | || ||||| |||
Sbjct: 804 gatcgttacttgcaaccacacttcagatattatatgagggaggtcagaacagttgtgtat 863

                                                          
Query: 225 tcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggc 271
           || |||||||| ||||| ||||||||||| || || ||||| |||||
Sbjct: 864 tcccagttcctggagtcctacaagagtgttactattgaggccatggc 910
to top
>ref|NM_025550.2| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase,
            6 (Psmd6), mRNA
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 321  tttattgctgctgggaaacttcactgcaagattgataa 358
            |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 1030 tttattgctgctggaagactccactgcaaaattgataa 1067
to top
>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence
          Length = 225423

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 321   tttattgctgctgggaaacttcactgcaagattgataa 358
             |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 10403 tttattgctgctggaagactccactgcaaaattgataa 10440
to top
>dbj|AK010287.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:2400006A19 product:PROTEASOME REGULATORY PARTICLE
            SUBUNIT P44S10 homolog [Homo sapiens], full insert
            sequence
          Length = 1329

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 321  tttattgctgctgggaaacttcactgcaagattgataa 358
            |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 1063 tttattgctgctggaagactccactgcaaaattgataa 1100
to top
>dbj|AK002343.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:0610008K13 product:PROTEASOME REGULATORY
            PARTICLE SUBUNIT P44S10 homolog [Homo sapiens], full
            insert sequence
          Length = 1331

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 321  tttattgctgctgggaaacttcactgcaagattgataa 358
            |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 1066 tttattgctgctggaagactccactgcaaaattgataa 1103
to top
>gb|BC006869.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase,
            6, mRNA (cDNA clone MGC:6476 IMAGE:2646325), complete cds
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 321  tttattgctgctgggaaacttcactgcaagattgataa 358
            |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 1030 tttattgctgctggaagactccactgcaaaattgataa 1067
to top
>gb|AC154515.2| Mus musculus BAC clone RP24-81I13 from chromosome 14, complete sequence
          Length = 172475

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 321    tttattgctgctgggaaacttcactgcaagattgataa 358
              |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 143656 tttattgctgctggaagactccactgcaaaattgataa 143693
to top
>dbj|AK211149.1| Mus musculus cDNA, clone:Y2G0120M22, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 381

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 tttattgctgctgggaaacttcactgcaagattgataa 358
           |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 308 tttattgctgctggaagactccactgcaaaattgataa 345
to top
>dbj|AK206699.1| Mus musculus cDNA, clone:Y2G0105K15, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 326

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 tttattgctgctgggaaacttcactgcaagattgataa 358
           |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 150 tttattgctgctggaagactccactgcaaaattgataa 187
to top
>dbj|AK183447.1| Mus musculus cDNA, clone:Y0G0125O22, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 418

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 tttattgctgctgggaaacttcactgcaagattgataa 358
           |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 242 tttattgctgctggaagactccactgcaaaattgataa 279
to top
>dbj|AK178742.1| Mus musculus cDNA, clone:Y0G0107M03, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 432

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 tttattgctgctgggaaacttcactgcaagattgataa 358
           |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 309 tttattgctgctggaagactccactgcaaaattgataa 346
to top
>emb|AJ252147.1|MMU252147 Mus musculus mRNA for putative KIAA0107 homologue (KIAA0107 gene)
          Length = 1335

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 321  tttattgctgctgggaaacttcactgcaagattgataa 358
            |||||||||||||| | ||| |||||||| ||||||||
Sbjct: 1066 tttattgctgctggaagactccactgcaaaattgataa 1103
to top
>gb|BC108599.1| Xenopus laevis cDNA clone MGC:131117 IMAGE:7983247, complete cds
          Length = 1368

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 417  accatcaagcagggagacttcctgctgaatcgcatacagaa 457
            |||||||||||||||||| | ||||| || ||||| |||||
Sbjct: 1185 accatcaagcagggagacctgctgctcaaccgcatccagaa 1225
to top
>emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chromosome 11 Contains the
             Akap1 gene for A kinase (PRKA) anchor protein 1, complete
             sequence
          Length = 76410

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   tttggagcagctccttggcac 518
             |||||||||||||||||||||
Sbjct: 17539 tttggagcagctccttggcac 17559
to top
>dbj|AK033468.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030214A21 product:unclassifiable, full
           insert sequence
          Length = 1684

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 498 tttggagcagctccttggcac 518
           |||||||||||||||||||||
Sbjct: 616 tttggagcagctccttggcac 636
to top
>gb|U42580.4|PBU42580 Paramecium bursaria Chlorella virus 1, complete genome
          Length = 330743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    tggtgtgacagttgatttca 300
              ||||||||||||||||||||
Sbjct: 316683 tggtgtgacagttgatttca 316702
to top
>gb|AC131329.13| Mus musculus chromosome 13, clone RP23-474B11, complete sequence
          Length = 172830

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    gattgtcagtacaagtcatt 124
              ||||||||||||||||||||
Sbjct: 143632 gattgtcagtacaagtcatt 143651
to top
>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    atttcatagaccaggaattg 314
              ||||||||||||||||||||
Sbjct: 198109 atttcatagaccaggaattg 198128
to top
>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence
          Length = 224351

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   acccaagcttcccttacaag 549
             ||||||||||||||||||||
Sbjct: 64940 acccaagcttcccttacaag 64959
to top
>gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence
          Length = 233720

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ctgacggagcagatcaagtt 163
             ||||||||||||||||||||
Sbjct: 49883 ctgacggagcagatcaagtt 49864
to top
>emb|AL138897.10| Human DNA sequence from clone RP11-231D11 on chromosome 10, complete
             sequence
          Length = 59779

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    cctcacctctcggaatttctcaat 95
             ||||||||| ||||||||||||||
Sbjct: 33059 cctcacctcacggaatttctcaat 33036
to top
>emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30
          Length = 233755

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ctgacggagcagatcaagtt 163
             ||||||||||||||||||||
Sbjct: 69934 ctgacggagcagatcaagtt 69953
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      tcggaatttctcaattccct 100
               ||||||||||||||||||||
Sbjct: 4070891 tcggaatttctcaattccct 4070910
to top
>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence
          Length = 195714

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    gattgtcagtacaagtcatt 124
              ||||||||||||||||||||
Sbjct: 191121 gattgtcagtacaagtcatt 191102
to top
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds
          Length = 80367

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 417   accatcaagcagggagacttcctgctgaatcgcatacagaagctgtcgcgagtcat 472
             ||||||||| |||| ||||| ||||||||  |  | |||||||||||| |||||||
Sbjct: 62491 accatcaagaagggcgacttgctgctgaacagagtccagaagctgtcgagagtcat 62436
to top
>gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence
          Length = 153415

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   atttcatagaccaggaattg 314
             ||||||||||||||||||||
Sbjct: 77618 atttcatagaccaggaattg 77637
to top
>gb|AC148053.3| Carollia perspicillata clone 594J14, complete sequence
          Length = 125844

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   cacaaccctaccctacccaa 535
             ||||||||||||||||||||
Sbjct: 59923 cacaaccctaccctacccaa 59904
to top
>dbj|AP006147.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36E18, TM0288,
             complete sequence
          Length = 112234

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ggctgccgcatttggtgtga 288
             ||||||||||||||||||||
Sbjct: 99911 ggctgccgcatttggtgtga 99930
to top
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 516     cacaaccctaccctacccaa 535
               ||||||||||||||||||||
Sbjct: 1112141 cacaaccctaccctacccaa 1112122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,090,619
Number of Sequences: 3902068
Number of extensions: 4090619
Number of successful extensions: 74477
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 74279
Number of HSP's gapped (non-prelim): 194
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top