ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags38a15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1700 Score = 557 bits (281), Expect = e-155 Identities = 420/467 (89%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 800 acctcggaggccatccgtgactgggtcaccaatgttgagaacactcactacattttggga 859 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 860 tcagttgctggtccgcatccatacccgatgatggtgagagagttccataaggtgattggc 919 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 920 aaggagacccgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgct 979 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 980 tgtgttggtggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagat 1039 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 ||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 1040 ataagaatgattggagtggaggctgctggctatggtgtagacactgacaaacatgctgcc 1099 Query: 305 acattgacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggat 364 || ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||| Sbjct: 1100 actttgacaaagggagaagtgggagttctccatggatcattgagctatgtgttgcaggat 1159 Query: 365 gctgatggacaagtgattgagccccactccatcagtgctgggttggattacccaggtgtt 424 | |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| |||||| Sbjct: 1160 gatgatggacaagttattgaaccccactccattagtgctgggctggactaccctggtgtt 1219 Query: 425 ggacctgagcatagtttnttgagggatattggacgtgctgaatatga 471 || ||||||||||| || |||| |||||||||||||||||||||||| Sbjct: 1220 gggcctgagcatagctttttgaaggatattggacgtgctgaatatga 1266
>dbj|AK072535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133G14, full insert sequence Length = 1700 Score = 557 bits (281), Expect = e-155 Identities = 420/467 (89%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 800 acctcggaggccatccgtgactgggtcaccaatgttgagaacactcactacattttggga 859 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 860 tcagttgctggtccgcatccatacccgatgatggtgagagagttccataaggtgattggc 919 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 920 aaggagacccgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgct 979 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 980 tgtgttggtggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagat 1039 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 ||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 1040 ataagaatgattggagtggaggctgctggctatggtgtagacactgacaaacatgctgcc 1099 Query: 305 acattgacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggat 364 || ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||| Sbjct: 1100 actttgacaaagggagaagtgggagttctccatggatcattgagctatgtgttgcaggat 1159 Query: 365 gctgatggacaagtgattgagccccactccatcagtgctgggttggattacccaggtgtt 424 | |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| |||||| Sbjct: 1160 gatgatggacaagttattgaaccccactccattagtgctgggctggactaccctggtgtt 1219 Query: 425 ggacctgagcatagtttnttgagggatattggacgtgctgaatatga 471 || ||||||||||| || |||| |||||||||||||||||||||||| Sbjct: 1220 gggcctgagcatagctttttgaaggatattggacgtgctgaatatga 1266
>dbj|AK060205.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A05, full insert sequence Length = 1183 Score = 557 bits (281), Expect = e-155 Identities = 420/467 (89%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 283 acctcggaggccatccgtgactgggtcaccaatgttgagaacactcactacattttggga 342 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 343 tcagttgctggtccgcatccatacccgatgatggtgagagagttccataaggtgattggc 402 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 403 aaggagacccgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgct 462 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 463 tgtgttggtggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagat 522 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 ||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 523 ataagaatgattggagtggaggctgctggctatggtgtagacactgacaaacatgctgcc 582 Query: 305 acattgacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggat 364 || ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||| Sbjct: 583 actttgacaaagggagaagtgggagttctccatggatcattgagctatgtgttgcaggat 642 Query: 365 gctgatggacaagtgattgagccccactccatcagtgctgggttggattacccaggtgtt 424 | |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| |||||| Sbjct: 643 gatgatggacaagttattgaaccccactccattagtgctgggctggactaccctggtgtt 702 Query: 425 ggacctgagcatagtttnttgagggatattggacgtgctgaatatga 471 || ||||||||||| || |||| |||||||||||||||||||||||| Sbjct: 703 gggcctgagcatagctttttgaaggatattggacgtgctgaatatga 749
>dbj|AK069187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G22, full insert sequence Length = 1027 Score = 553 bits (279), Expect = e-154 Identities = 413/458 (90%) Strand = Plus / Plus Query: 14 gccatccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcg 73 |||||||||||||||||||| ||||| |||| ||| |||||||||||||| |||||||| Sbjct: 6 gccatccgtgactgggtcaccaatgttgagaacactcactacattttgggatcagttgct 65 Query: 74 ggtccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacc 133 ||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 66 ggtccgcatccatacccgatgatggtgagagagttccataaggtgattggcaaggagacc 125 Query: 134 cgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggt 193 |||||||| || ||||| |||||||||||||||||||| || |||||||||| ||||| Sbjct: 126 cgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgcttgtgttggt 185 Query: 194 ggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactg 253 ||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||| || Sbjct: 186 ggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagatataagaatg 245 Query: 254 attggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgaca 313 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || |||||| Sbjct: 246 attggagtggaggctgctggctatggtgtagacactgacaaacatgctgccactttgaca 305 Query: 314 aagggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatgga 373 ||||| ||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||| Sbjct: 306 aagggagaagtgggagttctccatggatcattgagctatgtgttgcaggatgatgatgga 365 Query: 374 caagtgattgagccccactccatcagtgctgggttggattacccaggtgttggacctgag 433 ||||| ||||| ||||||||||| ||||||||| |||| ||||| |||||||| |||||| Sbjct: 366 caagttattgaaccccactccattagtgctgggctggactaccctggtgttgggcctgag 425 Query: 434 catagtttnttgagggatattggacgtgctgaatatga 471 ||||| || |||| |||||||||||||||||||||||| Sbjct: 426 catagctttttgaaggatattggacgtgctgaatatga 463
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 484 bits (244), Expect = e-133 Identities = 363/403 (90%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 2024993 acctcggaggccatccgtgactgggtcaccaatgttgagaacactcactacattttggga 2025052 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 2025053 tcagttgctggtccgcatccatacccgatgatggtgagagagttccataaggtgattggc 2025112 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 2025113 aaggagacccgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgct 2025172 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 2025173 tgtgttggtggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagat 2025232 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 ||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 2025233 ataagaatgattggagtggaggctgctggctatggtgtagacactgacaaacatgctgcc 2025292 Query: 305 acattgacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggat 364 || ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||| Sbjct: 2025293 actttgacaaagggagaagtgggagttctccatggatcattgagctatgtgttgcaggat 2025352 Query: 365 gctgatggacaagtgattgagccccactccatcagtgctgggt 407 | |||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 2025353 gatgatggacaagttattgaaccccactccattagtgctgggt 2025395 Score = 81.8 bits (41), Expect = 2e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 408 tggattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaat 467 |||| ||||| |||||||| ||||||||||| || |||| |||||||||||||||||||| Sbjct: 2025477 tggactaccctggtgttgggcctgagcatagctttttgaaggatattggacgtgctgaat 2025536 Query: 468 atga 471 |||| Sbjct: 2025537 atga 2025540
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 484 bits (244), Expect = e-133 Identities = 363/403 (90%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 18523 acctcggaggccatccgtgactgggtcaccaatgttgagaacactcactacattttggga 18582 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 18583 tcagttgctggtccgcatccatacccgatgatggtgagagagttccataaggtgattggc 18642 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 18643 aaggagacccgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgct 18702 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 18703 tgtgttggtggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagat 18762 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 ||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 18763 ataagaatgattggagtggaggctgctggctatggtgtagacactgacaaacatgctgcc 18822 Query: 305 acattgacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggat 364 || ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||| Sbjct: 18823 actttgacaaagggagaagtgggagttctccatggatcattgagctatgtgttgcaggat 18882 Query: 365 gctgatggacaagtgattgagccccactccatcagtgctgggt 407 | |||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 18883 gatgatggacaagttattgaaccccactccattagtgctgggt 18925 Score = 81.8 bits (41), Expect = 2e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 408 tggattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaat 467 |||| ||||| |||||||| ||||||||||| || |||| |||||||||||||||||||| Sbjct: 19007 tggactaccctggtgttgggcctgagcatagctttttgaaggatattggacgtgctgaat 19066 Query: 468 atga 471 |||| Sbjct: 19067 atga 19070
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 484 bits (244), Expect = e-133 Identities = 363/403 (90%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 150191 acctcggaggccatccgtgactgggtcaccaatgttgagaacactcactacattttggga 150250 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||| ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 150251 tcagttgctggtccgcatccatacccgatgatggtgagagagttccataaggtgattggc 150310 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 150311 aaggagacccgtagacaggccatggagaagtggggtggcaagcctgatgtcttggttgct 150370 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 150371 tgtgttggtggtggatcaaacgccatgggtctcttccatgagttcgttgatgatcaagat 150430 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 ||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 150431 ataagaatgattggagtggaggctgctggctatggtgtagacactgacaaacatgctgcc 150490 Query: 305 acattgacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggat 364 || ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||| Sbjct: 150491 actttgacaaagggagaagtgggagttctccatggatcattgagctatgtgttgcaggat 150550 Query: 365 gctgatggacaagtgattgagccccactccatcagtgctgggt 407 | |||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 150551 gatgatggacaagttattgaaccccactccattagtgctgggt 150593 Score = 81.8 bits (41), Expect = 2e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 408 tggattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaat 467 |||| ||||| |||||||| ||||||||||| || |||| |||||||||||||||||||| Sbjct: 150675 tggactaccctggtgttgggcctgagcatagctttttgaaggatattggacgtgctgaat 150734 Query: 468 atga 471 |||| Sbjct: 150735 atga 150738
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 434 bits (219), Expect = e-118 Identities = 348/391 (89%) Strand = Plus / Minus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 69010 atccgcgactgggtcactaatgtggagactacacactacattttgggctctgttgctggt 68951 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68950 ccgcacccatacccaatgatggtgagggagttccataaggttattggcaaggagacccgg 68891 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||||||||||||||||| ||||| || ||| ||||||||||| | |||||| Sbjct: 68890 aggcaggccatggacaagtggggtggaaagccggatgtgttggttgcttgcgtcggtggt 68831 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| || |||||| | ||||||||||||||||| ||||| ||||| || |||||| Sbjct: 68830 ggatcaaacgctatgggtttattccatgagtttgttgaggatcaagatgtgaggctgatt 68771 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||||||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 68770 ggagtggaggcagctggtcatggtgtagacactgacaagcatgctgctactttgacaaag 68711 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || ||||| ||||||||||| |||||| |||| || | ||||||| | |||||||||| Sbjct: 68710 ggcgaagttggagttctccacggatctatgagctacttgctgcaggacgatgatggacaa 68651 Query: 377 gtgattgagccccactccatcagtgctgggt 407 || ||||| |||||||||||||||||||||| Sbjct: 68650 gttattgaaccccactccatcagtgctgggt 68620 Score = 67.9 bits (34), Expect = 3e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 408 tggattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaat 467 |||| ||||| ||||||||||| ||||| ||||| |||| ||| |||||||||||||||| Sbjct: 68537 tggactaccctggtgttggacccgagcacagtttcttgaaggacattggacgtgctgaat 68478 Query: 468 a 468 | Sbjct: 68477 a 68477
>gb|M76684.1|MZEORP1A Zea mays tryptophan synthase beta-subunit (TSB1) mRNA, complete cds Length = 1382 Score = 420 bits (212), Expect = e-114 Identities = 394/455 (86%) Strand = Plus / Plus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 |||||||||||||||||||| || |||||||||||||| || |||||||| ||||| || Sbjct: 511 atccgtgactgggtcactaacgtggagaccacacactatatattgggctctgttgctggc 570 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 571 ccgcacccgtacccgatgatggtgagggagttccacaaggttatcggcaaggagacccgg 630 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||| ||||||||||||||||||| ||||| |||| |||||| | || ||| Sbjct: 631 aggcaggccatgcacaagtggggtggcaagccggacgtcttggtcgcttgcgtcgggggt 690 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 691 ggatcaaacgccatgggcctgttccacgagttcgttgaggatcaggatgtgaggctgatc 750 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||||||||||| ||||||||||| |||||||| ||||||||||| || || ||||||||| Sbjct: 751 ggagtggaggcagctggccatggcgtagacaccgacaagcacgcggcgactttgacaaag 810 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || |||| |||||||||||||||||| |||| ||| | ||||||| | ||||| ||| Sbjct: 811 ggccaagttggagttctccatggatctatgagctatttgctgcaggacgacgatgggcaa 870 Query: 377 gtgattgagccccactccatcagtgctgggttggattacccaggtgttggacctgagcat 436 || || ||||||||||||||||||||||| |||||||||| || ||||||||||||||| Sbjct: 871 gttatcgagccccactccatcagtgctggactggattaccctggcgttggacctgagcat 930 Query: 437 agtttnttgagggatattggacgtgctgaatatga 471 ||||| |||| ||| || ||||| ||||||||||| Sbjct: 931 agtttcttgaaggacatcggacgcgctgaatatga 965
>gb|BT016988.1| Zea mays clone EK07D2304D07.c mRNA sequence Length = 989 Score = 416 bits (210), Expect = e-113 Identities = 395/457 (86%) Strand = Plus / Minus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 ||||||||||||||||| ||||| |||||||||||||| || |||||||| | ||| ||| Sbjct: 892 atccgtgactgggtcacaaatgtggagaccacacactatatcttgggctctggtgccggt 833 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 832 ccgcacccgtacccgatgatggtgagggagttccataaggttattggcaaggaaacccgg 773 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||||||||||||||||||||||| ||||| ||||||| ||| | || || Sbjct: 772 aggcaggccatggacaagtggggtggcaagccggacgtattggttgcctgcgtcggcggc 713 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||| || Sbjct: 712 ggatcaaacgccatgggcctattccatgagtttgttgaggatcaagatgtgagcctggtt 653 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||||||||||| |||||||||| |||||||| |||||||| || || || ||||||||| Sbjct: 652 ggagtggaggcacctggccatggcgtagacaccgacaagcatgcggcgactttgacaaag 593 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || |||||||||||||||||||||| |||| ||| | ||||||||| ||| |||||| Sbjct: 592 ggccaagtcggagttctccatggatccatgagctatttgctgcaggatgatgacggacaa 533 Query: 377 gtgattgagccccactccatcagtgctgggttggattacccaggtgttggacctgagcat 436 || || || ||||||||||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 532 gttatcgaaccccactccatcagtgctgggctcgattaccctggcgttggacccgagcac 473 Query: 437 agtttnttgagggatattggacgtgctgaatatgata 473 ||||| |||| ||| ||||||||||| ||||| |||| Sbjct: 472 agtttcttgaaggacattggacgtgccgaatacgata 436
>gb|M76685.1|MZEORP2A Zea mays tryptophan synthase beta-subunit (TSB2) mRNA, complete cds Length = 1540 Score = 416 bits (210), Expect = e-113 Identities = 395/457 (86%) Strand = Plus / Plus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 ||||||||||||||||| ||||| |||||||||||||| || |||||||| ||||| ||| Sbjct: 675 atccgtgactgggtcacaaatgtggagaccacacactatatcttgggctctgttgccggt 734 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 735 ccgcacccgtacccgatgatggtgagggagttccataaggttattggcaaggaaacccgg 794 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||||||||||||||||||||||| ||||| ||||||| ||| | || || Sbjct: 795 aggcaggccatggacaagtggggtggcaagccggacgtattggttgcctgcgtcggcggc 854 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| |||||||| | ||||||||||||||||| ||||| ||||| || ||| || Sbjct: 855 ggatcaaacgccatgggcttattccatgagtttgttgaggatcaagatgtgaggctggtt 914 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||| ||||||| ||||||||||| |||||||| |||||||| || || || ||||||||| Sbjct: 915 ggactggaggcagctggccatggcgtagacaccgacaagcatgcggcgactttgacaaag 974 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || |||||||||||||||||||||| |||| ||| | ||||||||| ||| |||||| Sbjct: 975 ggccaagtcggagttctccatggatccatgagctatttgctgcaggatgatgacggacaa 1034 Query: 377 gtgattgagccccactccatcagtgctgggttggattacccaggtgttggacctgagcat 436 || || || ||||||||||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 1035 gttatcgaaccccactccatcagtgctgggctcgattaccctggcgttggacccgagcac 1094 Query: 437 agtttnttgagggatattggacgtgctgaatatgata 473 ||||| |||| ||| ||||||||||| ||||| |||| Sbjct: 1095 agtttcttgaaggacattggacgtgccgaatacgata 1131
>gb|AY104030.1| Zea mays PCO122526 mRNA sequence Length = 1434 Score = 404 bits (204), Expect = e-109 Identities = 392/455 (86%) Strand = Plus / Plus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 |||||||||||||||||||| || |||||||||||||| || |||||||| ||||| || Sbjct: 559 atccgtgactgggtcactaacgtggagaccacacactatatattgggctctgttgctggc 618 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 619 ccgcacccgtacccgatgatggtgagggagttccacaaggttatcggcaaggagacccgg 678 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||| ||||||||||||||||||| ||||| |||| |||||| | || ||| Sbjct: 679 aggcaggccatgcacaagtggggtggcaagccggacgtcttggtcgcttgcgtcgggggt 738 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 739 ggatcaaacgccatgggcctgttccacgagttcgttgaggatcaggatgtgaggctgatc 798 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||||||||||| ||||||||||| |||||||| |||||||| || || || ||||||||| Sbjct: 799 ggagtggaggcagctggccatggcgtagacaccgacaagcatgcggcgactttgacaaag 858 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || |||| |||||||||||||||||| |||| ||| | ||||||| | ||||| ||| Sbjct: 859 ggccaagttggagttctccatggatctatgagctatttgctgcaggacgacgatgggcaa 918 Query: 377 gtgattgagccccactccatcagtgctgggttggattacccaggtgttggacctgagcat 436 || || ||||||||||||||||||||||| |||||||||| || |||||||||||||| Sbjct: 919 gttatcgagccccactccatcagtgctggactggattaccctggcgttggacctgagcac 978 Query: 437 agtttnttgagggatattggacgtgctgaatatga 471 ||||| |||| ||| || ||||| ||||||||||| Sbjct: 979 agtttcttgaaggacatcggacgcgctgaatatga 1013
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 379 bits (191), Expect = e-102 Identities = 341/391 (87%) Strand = Plus / Minus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 ||||||||||||||||| ||||| |||||||||||||| || |||||||| ||||| ||| Sbjct: 74015 atccgtgactgggtcacaaatgtggagaccacacactatatcttgggctctgttgccggt 73956 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 73955 ccgcacccgtacccgatgatggtgagggagttccataaggttattggcaaggaaacccgg 73896 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||||||||||||||||||||||| ||||| ||||||| ||| | || || Sbjct: 73895 aggcaggccatggacaagtggggtggcaagccggacgtattggttgcctgcgtcggcggc 73836 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| |||||||| | ||||||||||||||||| ||||| ||||| || ||| || Sbjct: 73835 ggatcaaacgccatgggcttattccatgagtttgttgaggatcaagatgtgaggctggtt 73776 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||||||||||| ||||||||||| |||||||| |||||||| || || || ||||||||| Sbjct: 73775 ggagtggaggcagctggccatggcgtagacaccgacaagcatgcggcgactttgacaaag 73716 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || |||||||||||||||||||||| |||| ||| | ||||||||| ||| |||||| Sbjct: 73715 ggccaagtcggagttctccatggatccatgagctatttgctgcaggatgatgacggacaa 73656 Query: 377 gtgattgagccccactccatcagtgctgggt 407 || || || |||||||||||||||||||||| Sbjct: 73655 gttatcgaaccccactccatcagtgctgggt 73625 Score = 58.0 bits (29), Expect = 3e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 410 gattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaatat 469 |||||||| || |||||||| ||||| ||||| |||| ||| ||||||||||| ||||| Sbjct: 73531 gattaccctggcgttggacccgagcacagtttcttgaaggacattggacgtgccgaatac 73472 Query: 470 gata 473 |||| Sbjct: 73471 gata 73468
>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence Length = 181627 Score = 355 bits (179), Expect = 8e-95 Identities = 338/391 (86%) Strand = Plus / Minus Query: 17 atccgtgactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggt 76 |||||||||||||||||||| || |||||||||||||| || |||||||| ||||| || Sbjct: 79646 atccgtgactgggtcactaacgtggagaccacacactatatattgggctctgttgctggc 79587 Query: 77 ccacacccatacccgatgatggtgagggagttccataaggttattggcaaggagacccgt 136 || ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 79586 ccgcacccgtacccgatgatggtgagggagttccacaaggttatcggcaaggagacccgg 79527 Query: 137 agacaagcgatggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggt 196 || || || ||| ||||||||||||||||||| ||||| |||| |||||| | || ||| Sbjct: 79526 aggcaggccatgcacaagtggggtggcaagccggacgtcttggtcgcttgcgtcgggggt 79467 Query: 197 ggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgatt 256 |||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 79466 ggatcaaacgccatgggcctgttccacgagttcgttgaggatcaggatgtgaggctgatc 79407 Query: 257 ggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaag 316 ||||||||||| ||||||||||| |||||||| |||||||| || || || ||||||||| Sbjct: 79406 ggagtggaggcagctggccatggcgtagacaccgacaagcatgcggcgactttgacaaag 79347 Query: 317 ggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctgatggacaa 376 || |||| |||||||||||||||||| |||| ||| | ||||||| | ||||| ||| Sbjct: 79346 ggccaagttggagttctccatggatctatgagctatttgctgcaggacgacgatgggcaa 79287 Query: 377 gtgattgagccccactccatcagtgctgggt 407 || || ||||||||||||||||||||||||| Sbjct: 79286 gttatcgagccccactccatcagtgctgggt 79256 Score = 65.9 bits (33), Expect = 1e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 408 tggattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaat 467 |||||||||| || |||||||||||||| ||||| |||| ||| || ||||| ||||||| Sbjct: 79182 tggattaccctggcgttggacctgagcacagtttcttgaaggacatcggacgcgctgaat 79123 Query: 468 atga 471 |||| Sbjct: 79122 atga 79119
>dbj|AB003491.1| Oryza sativa mRNA for tryptophan synthase B, complete cds Length = 1413 Score = 319 bits (161), Expect = 5e-84 Identities = 372/443 (83%), Gaps = 6/443 (1%) Strand = Plus / Plus Query: 5 acctcggnagccatccgtgactgggtcactaatgtagagaccacacactacattttgggc 64 ||||||| |||||||||||||||||||| ||||| |||| ||| |||||||| ||||| Sbjct: 736 acctcggaggccatccgtgactgggtcacaaatgttgagaacactcactacatattggga 795 Query: 65 tcagttgcgggtccacacccatacccgatgatggtgagggagttccataaggttattggc 124 |||||||||||||| || |||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 796 tcagttgcgggtccgcatccataccccatgatggtgagagagttccataaggtgattggc 855 Query: 125 aaggagacccgtagacaagcgatggacaagtggggtggcaagcctgacgtgctggttgct 184 ||||||||||| ||||| || |||| ||||||||||| ||||| || || |||||||| Sbjct: 856 aaggagacccggagacaggccctggagaagtggggtgggaagccggatgttttggttgct 915 Query: 185 tgcattggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcaggat 244 || |||||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 916 tgtgttggtggtggttcaaacgccatgggtctcttccatgagtttgttgatgatcaagaa 975 Query: 245 gtaagactgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgca 304 || | |||| || |||||||||||||| ||||| |||| || ||| |||||||| Sbjct: 976 gtccggatgatcggtgtggaggctgctggattcggtgtggacagtgtcaaacacgctgct 1035 Query: 305 acattgacaaagggggaagtcggagttctccatggat------ctctgagttatgtattg 358 || ||||||||||| || || || ||||||||||||| || ||||||| | ||| Sbjct: 1036 actttgacaaagggagatgttggtgttctccatggatcactagctatgagttacctgttg 1095 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattaccca 418 || |||| |||||||||||| ||||| || |||||||| |||||||||||||| ||||| Sbjct: 1096 caagatgatgatggacaagtcattgaaccacactccattagtgctgggttggactacccc 1155 Query: 419 ggtgttggacctgagcatagttt 441 || || ||||| ||||| ||||| Sbjct: 1156 ggagtcggacccgagcacagttt 1178
>gb|BT009279.1| Triticum aestivum clone wlk8.pk0021.b11:fis, full insert mRNA sequence Length = 619 Score = 289 bits (146), Expect = 4e-75 Identities = 148/149 (99%) Strand = Plus / Plus Query: 325 cggagttctccatggatctctgagttatgtattgcaggatgctgatggacaagtgattga 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 cggagttctccatggatctctgagttatgtattgcaggatgctgatggacaagtgattga 82 Query: 385 gccccactccatcagtgctgggttggattacccaggtgttggacctgagcatagtttntt 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 83 gccccactccatcagtgctgggttggattacccaggtgttggacctgagcatagtttctt 142 Query: 445 gagggatattggacgtgctgaatatgata 473 ||||||||||||||||||||||||||||| Sbjct: 143 gagggatattggacgtgctgaatatgata 171
>gb|AF042320.1|AF042320 Camptotheca acuminata tryptophan synthase beta subunit mRNA, complete cds Length = 1706 Score = 139 bits (70), Expect = 9e-30 Identities = 330/417 (79%) Strand = Plus / Plus Query: 53 tacattttgggctcagttgcgggtccacacccatacccgatgatggtgagggagttccat 112 ||||||||||| || ||||| || ||||| |||||||| |||||||| || ||||| ||| Sbjct: 823 tacattttgggatctgttgctgggccacatccataccccatgatggtaagagagtttcat 882 Query: 113 aaggttattggcaaggagacccgtagacaagcgatggacaagtggggtggcaagcctgac 172 || |||||||| || || | | ||| || |||| || ||||| || || || || Sbjct: 883 gcagtgattggcaaagaaacaaggaaacaggcattggaaaaatgggggggaaaaccagat 942 Query: 173 gtgctggttgcttgcattggtggtggatcaaatgccatgggtctcttccatgagtttgtt 232 || |||||||| || ||||||| || |||||||||||||| ||||| |||||||||||| Sbjct: 943 gtactggttgcatgtgttggtggaggttcaaatgccatgggactctttcatgagtttgtt 1002 Query: 233 gatgatcaggatgtaagactgattggagtggaggctgctggccatggtgtagacactgac 292 |||||| | ||||| || |||| || ||||||||||| || |||| |||| | || Sbjct: 1003 gatgataaagatgttaggatgatcggtgtggaggctgcaggttttggtctagatagtggt 1062 Query: 293 aagcacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttat 352 ||||| ||||| || |||||||| ||||| ||||| ||||| |||||| || |||| ||| Sbjct: 1063 aagcatgctgctactttgacaaaaggggaggtcggggttctgcatggagctatgagctat 1122 Query: 353 gtattgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggat 412 |||| ||||||| ||| || ||| | |||||||| || ||||||||||| || |||| Sbjct: 1123 ttattacaggatgatgacgggcaaataattgagcctcattccatcagtgcaggcctggac 1182 Query: 413 tacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaatat 469 ||||| || ||||| || ||||| || || ||| ||||| ||||||||||||||| Sbjct: 1183 taccctggagttgggccagagcacagctttctgaaagatataggacgtgctgaatat 1239
>dbj|AB178644.1| Polygonum tinctorium mRNA for tryptophan synthase beta subunit, complete cds Length = 1696 Score = 135 bits (68), Expect = 1e-28 Identities = 320/404 (79%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| || || ||||||||||| |||||||| ||||| |||||| Sbjct: 794 tgggtgaccaatgtggagacaactcattacattttgggttcagttgctggtcctcaccca 853 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 ||||| |||||||| || ||||||||| || ||||| || || || || | ||||| Sbjct: 854 taccccatgatggtaagagagttccatgcagtaattggtaaagaaacacggaagcaagct 913 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 | || || |||||||| ||||| || || ||||||| || |||| || || ||||| Sbjct: 914 cttgagaaatggggtgggaagccagatgtattggttgcatgtgttggaggagggtcaaac 973 Query: 206 gccatgggtctcttccatgagtttgttgatgatcaggatgtaagactgattggagtggag 265 || ||||| |||||||||||||||||||||||| ||||||| ||| ||||||| |||||| Sbjct: 974 gcaatgggactcttccatgagtttgttgatgataaggatgtcagattgattggcgtggag 1033 Query: 266 gctgctggccatggtgtagacactgacaagcacgctgcaacattgacaaagggggaagtc 325 |||||||| ||| |||| | | |||||| ||||| || ||||| || || ||||| Sbjct: 1034 gctgctggttttggcttagatagcggcaagcatgctgccaccttgaccaaaggagaagtt 1093 Query: 326 ggagttctccatggatctctgagttatgtattgcaggatgctgatggacaagtgattgag 385 || || || |||||| | ||||||| || ||||||||| |||||| || || || ||| Sbjct: 1094 ggtgtgcttcatggagccatgagttacctactgcaggatgatgatggccaggttatagag 1153 Query: 386 ccccactccatcagtgctgggttggattacccaggtgttggacc 429 || || || || ||||| ||| |||||||||| || |||||||| Sbjct: 1154 cctcattcaataagtgccgggctggattaccctggagttggacc 1197
>gb|AF042321.1|AF042321 Camptotheca acuminata tryptophan synthase beta (TSB) gene, complete cds Length = 9645 Score = 125 bits (63), Expect = 1e-25 Identities = 282/355 (79%) Strand = Plus / Plus Query: 53 tacattttgggctcagttgcgggtccacacccatacccgatgatggtgagggagttccat 112 ||||||||||| || ||||| || ||||| |||||||| |||||||| || ||||| ||| Sbjct: 6328 tacattttgggatctgttgctgggccacatccataccccatgatggtaagagagtttcat 6387 Query: 113 aaggttattggcaaggagacccgtagacaagcgatggacaagtggggtggcaagcctgac 172 || |||||||| || || | | ||| || |||| || ||||| || || || || Sbjct: 6388 gcagtgattggcaaagaaacaaggaaacaggcattggaaaaatgggggggaaaaccagat 6447 Query: 173 gtgctggttgcttgcattggtggtggatcaaatgccatgggtctcttccatgagtttgtt 232 || |||||||| || ||||||| || |||||||||||||| ||||| |||||||||||| Sbjct: 6448 gtactggttgcatgtgttggtggaggttcaaatgccatgggactctttcatgagtttgtt 6507 Query: 233 gatgatcaggatgtaagactgattggagtggaggctgctggccatggtgtagacactgac 292 |||||| | ||||| || |||| || ||||||||||| || |||| |||| | || Sbjct: 6508 gatgataaagatgttaggatgatcggtgtggaggctgcaggttttggtctagatagtggt 6567 Query: 293 aagcacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttat 352 ||||| ||||| || |||||||| ||||| ||||| ||||| |||||| || |||| ||| Sbjct: 6568 aagcatgctgctactttgacaaaaggggaggtcggggttctgcatggagctatgagctat 6627 Query: 353 gtattgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggt 407 |||| ||||||| ||| || ||| | |||||||| || ||||||||||| |||| Sbjct: 6628 ttattacaggatgatgacgggcaaataattgagcctcattccatcagtgcagggt 6682
>ref|NM_118841.2| Arabidopsis thaliana TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT); tryptophan synthase AT4G27070 (TSB2) mRNA, complete cds Length = 1698 Score = 87.7 bits (44), Expect = 3e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| || || Sbjct: 848 tgggtgaccaatgtggagactacacattacatattgggatccgttgcgggtcctcatcct 907 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 || || |||||||| || || || || ||| ||||| || || || | | ||||||| Sbjct: 908 tatcctatgatggtcagagactttcacgcggtgattggtaaagaaacaaggaaacaagcg 967 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 ||||| || ||||| || |||||||| || ||||||||||| | |||||||| |||||| Sbjct: 968 atggagaaatggggcgggaagcctgatgttctggttgcttgtgtcggtggtggttcaaat 1027 Query: 206 gccatgggtctcttccatgagtttgttgatga 237 || ||||| ||||||||||| ||||| ||||| Sbjct: 1028 gctatgggactcttccatgaatttgtcgatga 1059 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 299 gctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgtattg 358 ||||| ||||||||||| || || ||||| || ||||| ||| || ||||||| | || Sbjct: 1121 gctgccacattgacaaaaggagatgtcggtgtactccacggagctatgagttacttgctg 1180 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattaccca 418 || |||| |||||| ||| | ||||| || |||||||||||||| || ||||| ||||| Sbjct: 1181 caagatgatgatggccaaatcattgaaccacactccatcagtgccggattggactaccct 1240 Query: 419 ggtgttggacctgagcatagttt 441 || || ||||||||||||||||| Sbjct: 1241 ggagtcggacctgagcatagttt 1263
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 87.7 bits (44), Expect = 3e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| || || Sbjct: 91646 tgggtgaccaatgtggagactacacattacatattgggatccgttgcgggtcctcatcct 91705 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 || || |||||||| || || || || ||| ||||| || || || | | ||||||| Sbjct: 91706 tatcctatgatggtcagagactttcacgcggtgattggtaaagaaacaaggaaacaagcg 91765 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 ||||| || ||||| || |||||||| || ||||||||||| | |||||||| |||||| Sbjct: 91766 atggagaaatggggcgggaagcctgatgttctggttgcttgtgtcggtggtggttcaaat 91825 Query: 206 gccatgggtctcttccatgagtttgttgatga 237 || ||||| ||||||||||| ||||| ||||| Sbjct: 91826 gctatgggactcttccatgaatttgtcgatga 91857 Score = 50.1 bits (25), Expect = 0.007 Identities = 88/109 (80%) Strand = Plus / Plus Query: 299 gctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgtattg 358 ||||| ||||||||||| || || ||||| || ||||| ||| || ||||||| | || Sbjct: 91919 gctgccacattgacaaaaggagatgtcggtgtactccacggagctatgagttacttgctg 91978 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggt 407 || |||| |||||| ||| | ||||| || |||||||||||||| |||| Sbjct: 91979 caagatgatgatggccaaatcattgaaccacactccatcagtgccgggt 92027
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 87.7 bits (44), Expect = 3e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| || || Sbjct: 8135 tgggtgaccaatgtggagactacacattacatattgggatccgttgcgggtcctcatcct 8194 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 || || |||||||| || || || || ||| ||||| || || || | | ||||||| Sbjct: 8195 tatcctatgatggtcagagactttcacgcggtgattggtaaagaaacaaggaaacaagcg 8254 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 ||||| || ||||| || |||||||| || ||||||||||| | |||||||| |||||| Sbjct: 8255 atggagaaatggggcgggaagcctgatgttctggttgcttgtgtcggtggtggttcaaat 8314 Query: 206 gccatgggtctcttccatgagtttgttgatga 237 || ||||| ||||||||||| ||||| ||||| Sbjct: 8315 gctatgggactcttccatgaatttgtcgatga 8346 Score = 50.1 bits (25), Expect = 0.007 Identities = 88/109 (80%) Strand = Plus / Plus Query: 299 gctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgtattg 358 ||||| ||||||||||| || || ||||| || ||||| ||| || ||||||| | || Sbjct: 8408 gctgccacattgacaaaaggagatgtcggtgtactccacggagctatgagttacttgctg 8467 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggt 407 || |||| |||||| ||| | ||||| || |||||||||||||| |||| Sbjct: 8468 caagatgatgatggccaaatcattgaaccacactccatcagtgccgggt 8516
>gb|BT003144.1| Arabidopsis thaliana At4g27070 mRNA, complete cds Length = 1428 Score = 87.7 bits (44), Expect = 3e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| || || Sbjct: 778 tgggtgaccaatgtggagactacacattacatattgggatccgttgcgggtcctcatcct 837 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 || || |||||||| || || || || ||| ||||| || || || | | ||||||| Sbjct: 838 tatcctatgatggtcagagactttcacgcggtgattggtaaagaaacaaggaaacaagcg 897 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 ||||| || ||||| || |||||||| || ||||||||||| | |||||||| |||||| Sbjct: 898 atggagaaatggggcgggaagcctgatgttctggttgcttgtgtcggtggtggttcaaat 957 Query: 206 gccatgggtctcttccatgagtttgttgatga 237 || ||||| ||||||||||| ||||| ||||| Sbjct: 958 gctatgggactcttccatgaatttgtcgatga 989 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 299 gctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgtattg 358 ||||| ||||||||||| || || ||||| || ||||| ||| || ||||||| | || Sbjct: 1051 gctgccacattgacaaaaggagatgtcggtgtactccacggagctatgagttacttgctg 1110 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattaccca 418 || |||| |||||| ||| | ||||| || |||||||||||||| || ||||| ||||| Sbjct: 1111 caagatgatgatggccaaatcattgaaccacactccatcagtgccggattggactaccct 1170 Query: 419 ggtgttggacctgagcatagttt 441 || || ||||||||||||||||| Sbjct: 1171 ggagtcggacctgagcatagttt 1193
>gb|AY084334.1| Arabidopsis thaliana clone 104687 mRNA, complete sequence Length = 1677 Score = 87.7 bits (44), Expect = 3e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| || || Sbjct: 827 tgggtgaccaatgtggagactacacattacatattgggatccgttgcgggtcctcatcct 886 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 || || |||||||| || || || || ||| ||||| || || || | | ||||||| Sbjct: 887 tatcctatgatggtcagagactttcacgcggtgattggtaaagaaacaaggaaacaagcg 946 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 ||||| || ||||| || |||||||| || ||||||||||| | |||||||| |||||| Sbjct: 947 atggagaaatggggcgggaagcctgatgttctggttgcttgtgtcggtggtggttcaaat 1006 Query: 206 gccatgggtctcttccatgagtttgttgatga 237 || ||||| ||||||||||| ||||| ||||| Sbjct: 1007 gctatgggactcttccatgaatttgtcgatga 1038 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 299 gctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgtattg 358 ||||| ||||||||||| || || ||||| || ||||| ||| || ||||||| | || Sbjct: 1100 gctgccacattgacaaaaggagatgtcggtgtactccacggagctatgagttacttgctg 1159 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattaccca 418 || |||| |||||| ||| | ||||| || |||||||||||||| || ||||| ||||| Sbjct: 1160 caagatgatgatggccaaatcattgaaccacactccatcagtgccggattggactaccct 1219 Query: 419 ggtgttggacctgagcatagttt 441 || || ||||||||||||||||| Sbjct: 1220 ggagtcggacctgagcatagttt 1242
>gb|M81620.1|ATHTRPSB A.thaliana tryptophan synthase beta-subunit (TSB2) gene, complete cds Length = 3007 Score = 87.7 bits (44), Expect = 3e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 26 tgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacaccca 85 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| || || Sbjct: 1669 tgggtgaccaatgtggagactacacattacatattgggatccgttgcgggtcctcatcct 1728 Query: 86 tacccgatgatggtgagggagttccataaggttattggcaaggagacccgtagacaagcg 145 || || |||||||| || || || || ||| ||||| || || || | | ||||||| Sbjct: 1729 tatcctatgatggtcagagactttcacgcggtgattggtaaagaaacaaggaaacaagcg 1788 Query: 146 atggacaagtggggtggcaagcctgacgtgctggttgcttgcattggtggtggatcaaat 205 ||||| || ||||| || |||||||| || ||||||||||| | |||||||| |||||| Sbjct: 1789 atggagaaatggggcgggaagcctgatgttctggttgcttgtgtcggtggtggttcaaat 1848 Query: 206 gccatgggtctcttccatgagtttgttgatga 237 || ||||| ||||||||||| ||||| ||||| Sbjct: 1849 gctatgggactcttccatgaatttgtcgatga 1880 Score = 50.1 bits (25), Expect = 0.007 Identities = 88/109 (80%) Strand = Plus / Plus Query: 299 gctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgtattg 358 ||||| ||||||||||| || || ||||| || ||||| ||| || ||||||| | || Sbjct: 1942 gctgccacattgacaaaaggagatgtcggtgtactccacggagctatgagttacttgctg 2001 Query: 359 caggatgctgatggacaagtgattgagccccactccatcagtgctgggt 407 || |||| |||||| ||| | ||||| || |||||||||||||| |||| Sbjct: 2002 caagatgatgatggccaaatcattgaaccacactccatcagtgccgggt 2050
>ref|NM_124862.3| Arabidopsis thaliana TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT) AT5G54810 (TSB1) mRNA, complete cds Length = 1657 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1080 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1139 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1140 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1199 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1200 cctggagtcggacccgagcacagttt 1225 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 975 ggtggtggttcaaacgctatgggactcttccatgaatttgt 1015
>gb|AY133620.1| Arabidopsis thaliana AT5g54810/MBG8_7 mRNA, complete cds Length = 1413 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1033 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1092 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1093 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1152 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1153 cctggagtcggacccgagcacagttt 1178 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 928 ggtggtggttcaaacgctatgggactcttccatgaatttgt 968
>dbj|AK221396.1| Arabidopsis thaliana mRNA for tryptophan synthase beta chain 1 precursor, complete cds, clone: RAFL25-45-M24 Length = 581 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 86 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 145 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 146 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 205 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 206 cctggagtcggacccgagcacagttt 231
>gb|AF367264.1|AF367264 Arabidopsis thaliana AT5g54810/MBG8_7 mRNA, complete cds Length = 1649 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1076 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1135 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1136 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1195 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1196 cctggagtcggacccgagcacagttt 1221 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 971 ggtggtggttcaaacgctatgggactcttccatgaatttgt 1011
>emb|BX831233.1|CNS0A1P3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1638 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1061 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1120 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1121 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1180 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1181 cctggagtcggacccgagcacagttt 1206 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 956 ggtggtggttcaaacgctatgggactcttccatgaatttgt 996
>emb|BX829760.1|CNS0A1C2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1532 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1063 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1122 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1123 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1182 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1183 cctggagtcggacccgagcacagttt 1208
>emb|BX829703.1|CNS0A1IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1062 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1121 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1122 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1181 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1182 cctggagtcggacccgagcacagttt 1207 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 957 ggtggtggttcaaacgctatgggactcttccatgaatttgt 997
>emb|BX831477.1|CNS0A0OO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS95ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1544 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1023 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1082 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1083 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1142 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1143 cctggagtcggacccgagcacagttt 1168 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 918 ggtggtggttcaaacgctatgggactcttccatgaatttgt 958
>emb|BX831093.1|CNS0A0PA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1481 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 945 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1004 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1005 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1064 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1065 cctggagtcggacccgagcacagttt 1090 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 840 ggtggtggttcaaacgctatgggactcttccatgaatttgt 880
>gb|AY087382.1| Arabidopsis thaliana clone 34783 mRNA, complete sequence Length = 1555 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1082 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1141 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||||||| | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1142 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcaggattggactac 1201 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1202 cctggagtcggacccgagcacagttt 1227 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 977 ggtggtggttcaaacgctatgggactcttccatgaatttgt 1017
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 24376 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 24317 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggt 407 |||| |||| |||||||||| | ||||| || |||||||||||||| |||| Sbjct: 24316 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcagggt 24265 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 24481 ggtggtggttcaaacgctatgggactcttccatgaatttgt 24441
>gb|M23872.1|ATHTRPB A.thaliana tryptophan synthase beta subunit (trpB) gene, complete cds Length = 4225 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 2882 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 2941 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggt 407 |||| |||| |||||||||| | ||||| || |||||||||||||| |||| Sbjct: 2942 ctgcaagatgatgatggacaaatcattgaaccacactccatcagtgcagggt 2993 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 2777 ggtggtggttcaaacgctatgggactcttccatgaatttgt 2817
>emb|BX834018.1|CNS0A0KQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1527 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Plus Query: 296 cacgctgcaacattgacaaagggggaagtcggagttctccatggatctctgagttatgta 355 |||||||| |||||||||||||| || || || || ||||||||| || ||||||| | Sbjct: 1025 cacgctgctacattgacaaagggagatgttggtgtcctccatggagctatgagttacttg 1084 Query: 356 ttgcaggatgctgatggacaagtgattgagccccactccatcagtgctgggttggattac 415 |||| |||| |||||| || | ||||| || |||||||||||||| || ||||| ||| Sbjct: 1085 ctgcaagatgatgatggttaaattattgaaccacactccatcagtgcaggattggactac 1144 Query: 416 ccaggtgttggacctgagcatagttt 441 || || || ||||| ||||| ||||| Sbjct: 1145 cctggagtcggacccgagcacagttt 1170 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgt 231 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 920 ggtggtggttcaaacgctatgggactcttccatgaatttgt 960
>emb|CT030234.9| M.truncatula DNA sequence from clone MTH2-22I15 on chromosome 3, complete sequence Length = 112511 Score = 67.9 bits (34), Expect = 3e-08 Identities = 174/218 (79%), Gaps = 2/218 (0%) Strand = Plus / Minus Query: 191 ggtggtggatcaaatgccatgggtctcttccatgagtttgttgatgatcag-gatgtaag 249 ||||| || |||||||||||||| || |||||||| || |||||||| ||| ||||| || Sbjct: 23169 ggtggaggttcaaatgccatgggacttttccatgaattcgttgatga-cagtgatgttag 23111 Query: 250 actgattggagtggaggctgctggccatggtgtagacactgacaagcacgctgcaacatt 309 || ||||| ||||| ||||||||| ||| | ||| || |||||| || || || || Sbjct: 23110 gctaattggtgtggaagctgctggctttggcctcaacagtggcaagcatgccgctacgtt 23051 Query: 310 gacaaagggggaagtcggagttctccatggatctctgagttatgtattgcaggatgctga 369 ||||||||| ||||| || ||| | |||||| || |||| ||| | ||||||||| ||| Sbjct: 23050 gacaaagggagaagttggtgttttgcatggagctatgagctatctgctgcaggatgatga 22991 Query: 370 tggacaagtgattgagccccactccatcagtgctgggt 407 ||||||| | ||||||| ||||| || ||||| |||| Sbjct: 22990 tggacaaattgttgagcctcactctattagtgcagggt 22953 Score = 46.1 bits (23), Expect = 0.10 Identities = 86/107 (80%) Strand = Plus / Minus Query: 23 gactgggtcactaatgtagagaccacacactacattttgggctcagttgcgggtccacac 82 |||||||| |||||||| || || || || ||||||||||| || ||||| || || || Sbjct: 23337 gactgggtgactaatgttgaaacaactcattacattttgggatctgttgctggaccgcat 23278 Query: 83 ccatacccgatgatggtgagggagttccataaggttattggcaagga 129 ||||| || |||||||| || ||||| ||| || ||||||||||| Sbjct: 23277 ccatatccaatgatggtaagagagtttcatgctgtgattggcaagga 23231 Score = 42.1 bits (21), Expect = 1.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 407 ttggattacccaggtgttggacctgagcatagtttnttga 446 ||||| ||||| |||||||||||||| ||||| || |||| Sbjct: 22691 ttggactaccctggtgttggacctgaacatagctttttga 22652
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 189 ttggtggtggatcaaatgccatgggtctcttccatgagtttgttga 234 |||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 2590689 ttggtggtggctcaaatgccatgggactgttccatgaatttgttga 2590644 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 345 tgagttatgtattgcaggatgctgatggacaagtgattgagccccactccatcagtgctg 404 |||| ||| ||||||||||||| ||||| || ||| ||||| |||||||||| || |||| Sbjct: 2590533 tgagctatctattgcaggatgccgatggtcaggtggttgaggcccactccattagcgctg 2590474 Query: 405 g 405 | Sbjct: 2590473 g 2590473
>gb|AY616079.1| Prototheca wickerhamii plastid tryptophan synthase beta chain mRNA, partial cds; nuclear gene for plastid product Length = 733 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 14 gccatccgtgactgggtcactaatgtagagaccacacactacat 57 |||||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 669 gccatccgcgactgggtcaccaatgtggagaccacgcactacat 712
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 401 gctgggttggattacccaggtgttggacctgagcat 436 ||||||||||||||||| ||||| || ||||||||| Sbjct: 876011 gctgggttggattacccgggtgtcggtcctgagcat 876046
>ref|XM_454431.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10637g predicted mRNA Length = 2130 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 401 gctgggttggattacccaggtgttggacctga 432 ||||| |||||||||||||||||||| ||||| Sbjct: 1798 gctggtttggattacccaggtgttggtcctga 1829
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 401 gctgggttggattacccaggtgttggacctga 432 ||||| |||||||||||||||||||| ||||| Sbjct: 940040 gctggtttggattacccaggtgttggtcctga 940071
>gb|AE008529.1| Streptococcus pneumoniae R6 section 145 of 184 of the complete genome Length = 12560 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 189 ttggtggtggatcaaatgccatgggtctcttccat 223 |||||||||| || |||||||| |||||||||||| Sbjct: 7218 ttggtggtgggtcgaatgccatcggtctcttccat 7184
>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence Length = 124972 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 216 tcttccatgagtttgttgatgat 238 ||||||||||||||||||||||| Sbjct: 47760 tcttccatgagtttgttgatgat 47738
>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence Length = 127295 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 216 tcttccatgagtttgttgatgat 238 ||||||||||||||||||||||| Sbjct: 78723 tcttccatgagtttgttgatgat 78745
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 408 tggattacccaggtgttggacctgagcatag 438 |||||||||| |||||||| ||||||||||| Sbjct: 626274 tggattaccctggtgttggccctgagcatag 626304
>gb|M58444.1|ACCTRPFB A.calcoaceticus trpFB operon Length = 2217 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 408 tggattacccaggtgttggacctgagcatag 438 |||||||||| |||||||| ||||||||||| Sbjct: 1845 tggattaccctggtgttggccctgagcatag 1875
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 44.1 bits (22), Expect = 0.41 Identities = 51/61 (83%) Strand = Plus / Minus Query: 410 gattacccaggtgttggacctgagcatagtttnttgagggatattggacgtgctgaatat 469 ||||| ||||| ||||| || |||||||||| || | || |||||||||||||||||| Sbjct: 1495142 gattatccaggggttgggccggagcatagttacttaaaagaaattggacgtgctgaatat 1495083 Query: 470 g 470 | Sbjct: 1495082 g 1495082
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 gattacccaggtgttggacctgagcatag 438 |||||||| |||||||| ||||||||||| Sbjct: 573935 gattaccctggtgttggtcctgagcatag 573963
>emb|BX470172.19| Zebrafish DNA sequence from clone DKEY-3H3 in linkage group 5, complete sequence Length = 243270 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 tcaaatgccatgggtctcttc 220 ||||||||||||||||||||| Sbjct: 180339 tcaaatgccatgggtctcttc 180319
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 180 ttgcttgcattggtggtggatcaaatgccatgggtct 216 |||||||| | ||||| ||||||||||| |||||||| Sbjct: 159921 ttgcttgcgtaggtggaggatcaaatgcaatgggtct 159885
>emb|AL450395.7| Mouse DNA sequence from clone RP23-145O4 on chromosome X, complete sequence Length = 198602 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 atgccatgggtctcttccatg 224 ||||||||||||||||||||| Sbjct: 106465 atgccatgggtctcttccatg 106485
>gb|AY845503.1| Campylobacter jejuni isolate CNet107 flagellin A (flaA) gene, partial cds Length = 321 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tcttccatgagtttgttgat 235 |||||||||||||||||||| Sbjct: 83 tcttccatgagtttgttgat 64
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gttgcttgcattggtggtgg 198 |||||||||||||||||||| Sbjct: 1231441 gttgcttgcattggtggtgg 1231460
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gttgcttgcattggtggtgg 198 |||||||||||||||||||| Sbjct: 1208262 gttgcttgcattggtggtgg 1208281
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gttgcttgcattggtggtgg 198 |||||||||||||||||||| Sbjct: 1208208 gttgcttgcattggtggtgg 1208227
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence Length = 124254 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgcaggatgctgatggacaa 376 |||||||||||||||||||| Sbjct: 22535 tgcaggatgctgatggacaa 22516
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gttgcttgcattggtggtgg 198 |||||||||||||||||||| Sbjct: 1239400 gttgcttgcattggtggtgg 1239419
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cccactccatcagtgctgggttggatta 414 ||||||||||||| ||||| |||||||| Sbjct: 1581545 cccactccatcagcgctggcttggatta 1581572
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ccacacccatacccgatgatggtg 100 |||||||| ||||||||||||||| Sbjct: 1924648 ccacacccctacccgatgatggtg 1924625
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 cacccatacccgatgatggtgagggagttcca 111 ||||| ||||||||||| ||| |||||||||| Sbjct: 2089456 cacccctacccgatgatcgtgcgggagttcca 2089425
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tgagtttgttgatgatcaggatgt 246 ||||||||||||| |||||||||| Sbjct: 16558954 tgagtttgttgataatcaggatgt 16558977
>dbj|AP006435.1| Sus scrofa CC chemokine receptor genes (CCR3, CCR2, CCR5, CCRL2, LTF), complete and partial cds, clone: 0479G08 Length = 144233 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gatgctgatggacaagtgat 381 |||||||||||||||||||| Sbjct: 95647 gatgctgatggacaagtgat 95628
>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7, LRRC2), complete cds, clone: 0475A03 Length = 165558 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gatgctgatggacaagtgat 381 |||||||||||||||||||| Sbjct: 27042 gatgctgatggacaagtgat 27023
>ref|XM_230346.3| PREDICTED: Rattus norvegicus similar to G2 (predicted) (LOC311264), mRNA Length = 6228 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ggaggctgctggccatggtg 281 |||||||||||||||||||| Sbjct: 3739 ggaggctgctggccatggtg 3720
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tgagtttgttgatgatcaggatgt 246 ||||||||||||| |||||||||| Sbjct: 54934 tgagtttgttgataatcaggatgt 54957
>dbj|AB102786.1| Cycloclasticus sp. A5 orf1, phnA1b, phnA1, phnA2, phnC, trpB, orf7, phnA4, phnA3 and phnD genes for hypothetical protein, aromatic dioxygenase large subunit, PAH dioxygenase iron sulfer protein large subunit, PAH dioxygenase iron sulfer protein small subunit, extradiol dioxygenase, tryptophan synthase b subunit, hypothetical protein, ferredoxin reductase, ferredoxin and isomerase, complete and partial cds Length = 10580 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 gggttggattacccaggtgttggacctgagca 435 ||||||||||| ||||| ||||||||| |||| Sbjct: 7582 gggttggattatccaggggttggacctcagca 7613
>dbj|AK120774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O03, full insert sequence Length = 4631 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tgagtttgttgatgatcaggatgt 246 ||||||||||||| |||||||||| Sbjct: 992 tgagtttgttgataatcaggatgt 1015
>emb|AJ328899.1|HSA328899 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PJ9R Length = 851 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tgtattgcaggatgctgatg 371 |||||||||||||||||||| Sbjct: 323 tgtattgcaggatgctgatg 342
>dbj|AK069690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A17, full insert sequence Length = 5229 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tgagtttgttgatgatcaggatgt 246 ||||||||||||| |||||||||| Sbjct: 1610 tgagtttgttgataatcaggatgt 1633
>gb|DQ335556.1| Campylobacter jejuni clone A10922 FlaA (flaA) gene, partial cds Length = 359 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tcttccatgagtttgttgat 235 |||||||||||||||||||| Sbjct: 102 tcttccatgagtttgttgat 83
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gttgcttgcattggtggtgg 198 |||||||||||||||||||| Sbjct: 1208140 gttgcttgcattggtggtgg 1208159
>emb|X96607.1|MMIGHALP M.musculus IgH 3' alpha enhancer DNA Length = 17956 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgcaggatgctgatggacaa 376 |||||||||||||||||||| Sbjct: 15831 tgcaggatgctgatggacaa 15812
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 cacccatacccgatgatggtgagggagttcca 111 ||||| ||||||||||| ||| |||||||||| Sbjct: 2227574 cacccctacccgatgatcgtgcgggagttcca 2227605 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,362,748 Number of Sequences: 3902068 Number of extensions: 3362748 Number of successful extensions: 69876 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69515 Number of HSP's gapped (non-prelim): 355 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
