ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37l15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full insert sequence Length = 1510 Score = 537 bits (271), Expect = e-149 Identities = 442/499 (88%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacct 61 ||||||||||||||| ||||||| || ||||| ||||| |||||||||||| |||||| Sbjct: 794 cttacaagtgttatctcattggatcgtgtatccctaaaggcaaaggttgtagatgcacct 853 Query: 62 gagatcctggctgttatcggcaaagtacctcacctctcggaatttctcaattccctctac 121 |||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 854 gagatcctggctgtaattggcaaagtacctcacctctctgagtttctcaactccctctac 913 Query: 122 gattgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagtta 181 |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 914 aattgccagtacaagtcattttttgccgcattctctggcttgacggagcagatcaagtta 973 Query: 182 gaccgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctat 241 ||||| ||| |||| || |||||||| |||| |||||||||||| || |||||||||||| Sbjct: 974 gaccgttacctgcagcctcatttccgttactacatgcgtgaagtccgtactgttgtctat 1033 Query: 242 tcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggt 301 || || ||||| ||||| |||||||||||||| ||||| ||||||||| | ||||||||| Sbjct: 1034 tcacaattcctcgagtcctacaagagtgtgacgatggaagcaatggcttctgcatttggt 1093 Query: 302 gtgacagttgatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcac 361 ||||| |||||||||||||||| ||||||||| ||||| ||||||||||| || || ||| Sbjct: 1094 gtgaccgttgatttcatagacctggaattgtcacgcttcattgctgctggaaagctccac 1153 Query: 362 tgcaagattgataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgcc 421 |||||||| |||||||||||| | ||||||||||||||||| |||||||| | ||||| Sbjct: 1154 tgcaagatcgataaggttgcttgcgtcctggagacgaaccggcctgatgccagaaatgct 1213 Query: 422 ttctaccagtcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtcg 481 ||||||||| | ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 1214 ttctaccaggcaaccatcaagcaaggggacttcctgctgaaccgcatccagaagctatca 1273 Query: 482 cgagtcattgacctgtagg 500 ||||||||||||||||||| Sbjct: 1274 cgagtcattgacctgtagg 1292
>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full insert sequence Length = 1515 Score = 537 bits (271), Expect = e-149 Identities = 442/499 (88%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacct 61 ||||||||||||||| ||||||| || ||||| ||||| |||||||||||| |||||| Sbjct: 799 cttacaagtgttatctcattggatcgtgtatccctaaaggcaaaggttgtagatgcacct 858 Query: 62 gagatcctggctgttatcggcaaagtacctcacctctcggaatttctcaattccctctac 121 |||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 859 gagatcctggctgtaattggcaaagtacctcacctctctgagtttctcaactccctctac 918 Query: 122 gattgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagtta 181 |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 919 aattgccagtacaagtcattttttgccgcattctctggcttgacggagcagatcaagtta 978 Query: 182 gaccgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctat 241 ||||| ||| |||| || |||||||| |||| |||||||||||| || |||||||||||| Sbjct: 979 gaccgttacctgcagcctcatttccgttactacatgcgtgaagtccgtactgttgtctat 1038 Query: 242 tcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggt 301 || || ||||| ||||| |||||||||||||| ||||| ||||||||| | ||||||||| Sbjct: 1039 tcacaattcctcgagtcctacaagagtgtgacgatggaagcaatggcttctgcatttggt 1098 Query: 302 gtgacagttgatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcac 361 ||||| |||||||||||||||| ||||||||| ||||| ||||||||||| || || ||| Sbjct: 1099 gtgaccgttgatttcatagacctggaattgtcacgcttcattgctgctggaaagctccac 1158 Query: 362 tgcaagattgataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgcc 421 |||||||| |||||||||||| | ||||||||||||||||| |||||||| | ||||| Sbjct: 1159 tgcaagatcgataaggttgcttgcgtcctggagacgaaccggcctgatgccagaaatgct 1218 Query: 422 ttctaccagtcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtcg 481 ||||||||| | ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 1219 ttctaccaggcaaccatcaagcaaggggacttcctgctgaaccgcatccagaagctatca 1278 Query: 482 cgagtcattgacctgtagg 500 ||||||||||||||||||| Sbjct: 1279 cgagtcattgacctgtagg 1297
>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome regulatory particle non-ATPase subunit7, complete cds Length = 1547 Score = 537 bits (271), Expect = e-149 Identities = 442/499 (88%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacct 61 ||||||||||||||| ||||||| || ||||| ||||| |||||||||||| |||||| Sbjct: 757 cttacaagtgttatctcattggatcgtgtatccctaaaggcaaaggttgtagatgcacct 816 Query: 62 gagatcctggctgttatcggcaaagtacctcacctctcggaatttctcaattccctctac 121 |||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 817 gagatcctggctgtaattggcaaagtacctcacctctctgagtttctcaactccctctac 876 Query: 122 gattgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagtta 181 |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 877 aattgccagtacaagtcattttttgccgcattctctggcttgacggagcagatcaagtta 936 Query: 182 gaccgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctat 241 ||||| ||| |||| || |||||||| |||| |||||||||||| || |||||||||||| Sbjct: 937 gaccgttacctgcagcctcatttccgttactacatgcgtgaagtccgtactgttgtctat 996 Query: 242 tcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggt 301 || || ||||| ||||| |||||||||||||| ||||| ||||||||| | ||||||||| Sbjct: 997 tcacaattcctcgagtcctacaagagtgtgacgatggaagcaatggcttctgcatttggt 1056 Query: 302 gtgacagttgatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcac 361 ||||| |||||||||||||||| ||||||||| ||||| ||||||||||| || || ||| Sbjct: 1057 gtgaccgttgatttcatagacctggaattgtcacgcttcattgctgctggaaagctccac 1116 Query: 362 tgcaagattgataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgcc 421 |||||||| |||||||||||| | ||||||||||||||||| |||||||| | ||||| Sbjct: 1117 tgcaagatcgataaggttgcttgcgtcctggagacgaaccggcctgatgccagaaatgct 1176 Query: 422 ttctaccagtcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtcg 481 ||||||||| | ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 1177 ttctaccaggcaaccatcaagcaaggggacttcctgctgaaccgcatccagaagctatca 1236 Query: 482 cgagtcattgacctgtagg 500 ||||||||||||||||||| Sbjct: 1237 cgagtcattgacctgtagg 1255
>ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 535 bits (270), Expect = e-149 Identities = 441/498 (88%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacct 61 ||||||||||||||| ||||||| || ||||| ||||| |||||||||||| |||||| Sbjct: 673 cttacaagtgttatctcattggatcgtgtatccctaaaggcaaaggttgtagatgcacct 732 Query: 62 gagatcctggctgttatcggcaaagtacctcacctctcggaatttctcaattccctctac 121 |||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 733 gagatcctggctgtaattggcaaagtacctcacctctctgagtttctcaactccctctac 792 Query: 122 gattgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagtta 181 |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 793 aattgccagtacaagtcattttttgccgcattctctggcttgacggagcagatcaagtta 852 Query: 182 gaccgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctat 241 ||||| ||| |||| || |||||||| |||| |||||||||||| || |||||||||||| Sbjct: 853 gaccgttacctgcagcctcatttccgttactacatgcgtgaagtccgtactgttgtctat 912 Query: 242 tcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggt 301 || || ||||| ||||| |||||||||||||| ||||| ||||||||| | ||||||||| Sbjct: 913 tcacaattcctcgagtcctacaagagtgtgacgatggaagcaatggcttctgcatttggt 972 Query: 302 gtgacagttgatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcac 361 ||||| |||||||||||||||| ||||||||| ||||| ||||||||||| || || ||| Sbjct: 973 gtgaccgttgatttcatagacctggaattgtcacgcttcattgctgctggaaagctccac 1032 Query: 362 tgcaagattgataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgcc 421 |||||||| |||||||||||| | ||||||||||||||||| |||||||| | ||||| Sbjct: 1033 tgcaagatcgataaggttgcttgcgtcctggagacgaaccggcctgatgccagaaatgct 1092 Query: 422 ttctaccagtcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtcg 481 ||||||||| | ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 1093 ttctaccaggcaaccatcaagcaaggggacttcctgctgaaccgcatccagaagctatca 1152 Query: 482 cgagtcattgacctgtag 499 |||||||||||||||||| Sbjct: 1153 cgagtcattgacctgtag 1170
>gb|AY107400.1| Zea mays PCO125916 mRNA sequence Length = 1443 Score = 452 bits (228), Expect = e-124 Identities = 417/480 (86%) Strand = Plus / Plus Query: 21 tggaccgcgtatctctaaaacaaaaggttgtagacgcacctgagatcctggctgttatcg 80 ||||||| |||||||| ||||||||||||||||| || ||||||||| | || || || | Sbjct: 736 tggaccgtgtatctctgaaacaaaaggttgtagatgcgcctgagatcttagccgtaattg 795 Query: 81 gcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtcat 140 ||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||| Sbjct: 796 gcaaagtacctcacctctcagagtttctcaattccctctacaattgccagtacaagtcat 855 Query: 141 tttttgtggcattctctggcctgacggagcagatcaagttagaccgatacttgcaaccac 200 ||||| | |||||||||||| |||| || | ||||||||||| || |||||||| || | Sbjct: 856 tttttattgcattctctggcttgactgaaccaatcaagttagagcgttacttgcagcctc 915 Query: 201 atttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcat 260 |||| ||||||| ||||||||||||||||||||||||||| || ||||| || || || | Sbjct: 916 attttcgctactacatgcgtgaagtgcgcactgttgtctactcacagtttctggaatcgt 975 Query: 261 acaagagtgtgacaatggaggcaatggctgccgcatttggtgtgacagttgatttcatag 320 ||||||||||||||||||| || |||||||| |||||||| || ||||| || || |||| Sbjct: 976 acaagagtgtgacaatggaagccatggctgctgcatttggcgtcacagtcgactttatag 1035 Query: 321 accaggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttg 380 |||||||| |||| ||||| ||||| |||||||| || ||||||||||| || || |||| Sbjct: 1036 accaggaactgtcacgcttcattgccgctgggaagctccactgcaagatagacaaagttg 1095 Query: 381 ctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatca 440 |||| ||| |||| ||||||||||||||||| |||| |||||||||||| | ||||||| Sbjct: 1096 ctggcgtcttggaaacgaaccgacctgatgctaggaacgccttctaccaggcaaccatca 1155 Query: 441 agcagggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 500 |||| ||||||||||||||||| ||||| ||||||||||| ||||| || |||||||||| Sbjct: 1156 agcaaggagacttcctgctgaaccgcatccagaagctgtcacgagttatcgacctgtagg 1215
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full insert sequence Length = 1371 Score = 430 bits (217), Expect = e-117 Identities = 418/485 (86%) Strand = Plus / Plus Query: 14 atcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacctgagatcctggct 73 ||||||||||| || |||||||||||||||||||| ||||| ||||| || || |||| Sbjct: 715 atcacattggatcgtgtatctctaaaacaaaaggtggtagatgcaccagaaattttggca 774 Query: 74 gttatcggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtac 133 || || |||||||||||||| || || || ||||| || ||||| ||| |||| |||||| Sbjct: 775 gtgattggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtac 834 Query: 134 aagtcattttttgtggcattctctggcctgacggagcagatcaagttagaccgatacttg 193 |||||||||||||| |||||||||||| ||||||||||||| ||||| || || || | Sbjct: 835 aagtcattttttgttgcattctctggcatgacggagcagattaagttggatcgctatctt 894 Query: 194 caaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcagttcctt 253 || || |||||||||||| ||| | |||||||| || ||||||||||| ||||| | Sbjct: 895 cagcctgatttccgctactatatgagggaagtgcggaccgttgtctattcacagtttttg 954 Query: 254 gagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggtgtgacagttgat 313 |||||||||||||||||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 955 gagtcatacaagagtgtgacaatggaagcgatggccgcagcatttggtgtgactgttgat 1014 Query: 314 ttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgat 373 ||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1015 ttcatagaccaggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgat 1074 Query: 374 aaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcg 433 |||||||||||||| |||||||| ||||||||||| || |||||||||||||||| || Sbjct: 1075 aaggttgctggtgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcg 1134 Query: 434 accatcaagcagggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgac 493 ||||||||||| || |||||| ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1135 accatcaagcaaggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgac 1194 Query: 494 ctgta 498 |||| Sbjct: 1195 ttgta 1199
>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence Length = 1636 Score = 400 bits (202), Expect = e-108 Identities = 421/494 (85%) Strand = Plus / Plus Query: 5 acaagtgttatcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacctgag 64 |||||||| ||||||||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 799 acaagtgtcatcacattggatcgtgtatctctgaaacaaaaggtggtagatgcaccagaa 858 Query: 65 atcctggctgttatcggcaaagtacctcacctctcggaatttctcaattccctctacgat 124 ||||||||||| || |||||||||||||||||||| || |||||||| ||||| ||| | Sbjct: 859 atcctggctgtaattggcaaagtacctcacctctccgagtttctcaactccctgtacaac 918 Query: 125 tgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagttagac 184 || ||||| ||||| || || || ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 919 tgccagtataagtcgttcttcgttgcattttctggtctgacagagcaaatcaagttagac 978 Query: 185 cgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcg 244 || || | || || ||||||||||||| |||| | ||||||||||| || || || || Sbjct: 979 cgttatcttcagcctcatttccgctactacatgagggaagtgcgcaccgtggtatactca 1038 Query: 245 cagttccttgagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggtgtg 304 |||||| | |||||||||||||||||||||||||| |||||||| | || || ||||| Sbjct: 1039 cagttcttagagtcatacaagagtgtgacaatggaagcaatggccactgcgttcggtgta 1098 Query: 305 acagttgatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgc 364 || ||||||||||| ||||||||| |||| || || ||||| |||||||| || |||||| Sbjct: 1099 actgttgatttcattgaccaggaactgtcacggttcattgcagctgggaagctgcactgc 1158 Query: 365 aagattgataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttc 424 ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||| Sbjct: 1159 aagattgataaggttgctggtgttctggagactaaccgacctgatgagaggaatgctttc 1218 Query: 425 taccagtcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtcgcga 484 |||||| ||||||||||||| || |||||| ||||||| ||||| |||||||| || || Sbjct: 1219 taccaggcgaccatcaagcaaggggacttcttgctgaaccgcatccagaagctttcacgg 1278 Query: 485 gtcattgacctgta 498 |||||||||||||| Sbjct: 1279 gtcattgacctgta 1292
>gb|AY104803.1| Zea mays PCO064157 mRNA sequence Length = 1631 Score = 400 bits (202), Expect = e-108 Identities = 421/494 (85%) Strand = Plus / Plus Query: 5 acaagtgttatcacattggaccgcgtatctctaaaacaaaaggttgtagacgcacctgag 64 |||||||| ||||||||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 814 acaagtgtcatcacattggatcgtgtatctctgaaacaaaaggtggtagatgcaccagaa 873 Query: 65 atcctggctgttatcggcaaagtacctcacctctcggaatttctcaattccctctacgat 124 ||||||||||| || |||||||||||||||||||| || |||||||| ||||| ||| | Sbjct: 874 atcctggctgtaattggcaaagtacctcacctctccgagtttctcaactccctgtacaac 933 Query: 125 tgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagttagac 184 || ||||| ||||| || || || ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 934 tgccagtataagtcgttcttcgttgcattttctggtctgacagagcaaatcaagttagac 993 Query: 185 cgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcg 244 || || | || || ||||||||||||| |||| | ||||||||||| || || || || Sbjct: 994 cgttatcttcagcctcatttccgctactacatgagggaagtgcgcaccgtggtatactca 1053 Query: 245 cagttccttgagtcatacaagagtgtgacaatggaggcaatggctgccgcatttggtgtg 304 |||||| | |||||||||||||||||||||||||| |||||||| | || || ||||| Sbjct: 1054 cagttcttagagtcatacaagagtgtgacaatggaagcaatggccactgcgttcggtgta 1113 Query: 305 acagttgatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgc 364 || ||||||||||| ||||||||| |||| || || ||||| |||||||| || |||||| Sbjct: 1114 actgttgatttcattgaccaggaactgtcacggttcattgcagctgggaagctgcactgc 1173 Query: 365 aagattgataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttc 424 ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||| Sbjct: 1174 aagattgataaggttgctggtgttctggagactaaccgacctgatgagaggaatgctttc 1233 Query: 425 taccagtcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtcgcga 484 |||||| ||||||||||||| || |||||| ||||||| ||||| |||||||| || || Sbjct: 1234 taccaggcgaccatcaagcaaggggacttcttgctgaaccgcatccagaagctttcacgg 1293 Query: 485 gtcattgacctgta 498 |||||||||||||| Sbjct: 1294 gtcattgacctgta 1307
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| || Sbjct: 40685 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 40744 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| | Sbjct: 40745 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 40804 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 323 |||| ||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 40805 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 40852 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||| | Sbjct: 40958 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgcttg 41017 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||||||||||||||||| |||||||| | ||||| ||||||||| | ||||||||||| Sbjct: 41018 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 41077 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 500 || |||||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 41078 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 41133 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 45 aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 104 |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 40447 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 40506 Query: 105 ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 155 ||||||| ||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 40507 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 40557 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaa 39 ||||||||||||||| ||||||| || ||||| ||||| Sbjct: 40332 cttacaagtgttatctcattggatcgtgtatccctaaa 40369
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| || Sbjct: 107498 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 107557 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| | Sbjct: 107558 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 107617 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 323 |||| ||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 107618 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 107665 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||| | Sbjct: 107771 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgcttg 107830 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||||||||||||||||| |||||||| | ||||| ||||||||| | ||||||||||| Sbjct: 107831 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 107890 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 500 || |||||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 107891 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 107946 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 45 aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 104 |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 107260 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 107319 Query: 105 ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 155 ||||||| ||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 107320 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 107370 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaa 39 ||||||||||||||| ||||||| || ||||| ||||| Sbjct: 107145 cttacaagtgttatctcattggatcgtgtatccctaaa 107182
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| || Sbjct: 24218273 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 24218332 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| | Sbjct: 24218333 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 24218392 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 323 |||| ||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 24218393 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 24218440 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||| | Sbjct: 24218546 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgcttg 24218605 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||||||||||||||||| |||||||| | ||||| ||||||||| | ||||||||||| Sbjct: 24218606 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 24218665 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 500 || |||||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 24218666 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 24218721 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 45 aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 104 |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 24218035 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 24218094 Query: 105 ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 155 ||||||| ||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 24218095 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 24218145 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaa 39 ||||||||||||||| ||||||| || ||||| ||||| Sbjct: 24217920 cttacaagtgttatctcattggatcgtgtatccctaaa 24217957
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 190 bits (96), Expect = 4e-45 Identities = 156/176 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||||||||| Sbjct: 13001 ggaattgtcacgcttcattgctgctggaaagctccactgcaagatcgataaggttgctgg 13060 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||||||||||||||||| |||||||| | ||||| ||||||||| | ||||||||||| Sbjct: 13061 cgtcctggagacgaaccggcctgatgccagaaatgctttctaccaggcaaccatcaagca 13120 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgtagg 500 || |||||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 13121 aggggacttcctgctgaaccgcatccagaagctatcacgagtcattgacctgtagg 13176 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||||||||||||||| ||| |||| || |||||||| |||| || Sbjct: 12728 ctggcttgacggagcagatcaagttagaccgttacctgcagcctcatttccgttactaca 12787 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 |||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| | Sbjct: 12788 tgcgtgaagtccgtactgttgtctattcacaattcctcgagtcctacaagagtgtgacga 12847 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagacc 323 |||| ||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 12848 tggaagcaatggcttctgcatttggtgtgaccgttgatttcatagacc 12895 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 45 aggttgtagacgcacctgagatcctggctgttatcggcaaagtacctcacctctcggaat 104 |||||||||| |||||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 12490 aggttgtagatgcacctgagatcctggctgtaattggcaaagtacctcacctctctgagt 12549 Query: 105 ttctcaattccctctacgattgtcagtacaagtcattttttgtggcattct 155 ||||||| ||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 12550 ttctcaactccctctacaattgccagtacaagtcattttttgccgcattct 12600 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2 cttacaagtgttatcacattggaccgcgtatctctaaa 39 ||||||||||||||| ||||||| || ||||| ||||| Sbjct: 12375 cttacaagtgttatctcattggatcgtgtatccctaaa 12412
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 186 bits (94), Expect = 6e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 |||||||||||| || ||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 23484801 ggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctgg 23484860 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||| |||||||| ||||||||||| || |||||||||||||||| ||||||||||||| Sbjct: 23484861 tgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagca 23484920 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 498 || |||||| ||||||| ||||| ||||| ||||| |||||||||||| |||| Sbjct: 23484921 aggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 23484974 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||| ||||| || || || | || || ||||||||||||| | Sbjct: 23484518 ctggcatgacggagcagattaagttggatcgctatcttcagcctcatttccgctactata 23484577 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 || | |||||||| || ||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 23484578 tgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagtgtgacaa 23484637 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccag 325 |||| || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 23484638 tggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccag 23484687 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 80 ggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtca 139 |||||||||||||| || || || ||||| || ||||| ||| |||| |||||||||||| Sbjct: 23484347 ggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtacaagtca 23484406 Query: 140 ttttttgtggcattct 155 |||||||| ||||||| Sbjct: 23484407 ttttttgttgcattct 23484422 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 14 atcacattggaccgcgtatctctaaaacaaaaggt 48 ||||||||||| || |||||||||||||||||||| Sbjct: 23484216 atcacattggatcgtgtatctctaaaacaaaaggt 23484250
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 186 bits (94), Expect = 6e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 |||||||||||| || ||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 50484 ggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctgg 50543 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||| |||||||| ||||||||||| || |||||||||||||||| ||||||||||||| Sbjct: 50544 tgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagca 50603 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 498 || |||||| ||||||| ||||| ||||| ||||| |||||||||||| |||| Sbjct: 50604 aggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 50657 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||| ||||| || || || | || || ||||||||||||| | Sbjct: 50201 ctggcatgacggagcagattaagttggatcgctatcttcagcctcatttccgctactata 50260 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 || | |||||||| || ||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 50261 tgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagtgtgacaa 50320 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccag 325 |||| || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 50321 tggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccag 50370 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 80 ggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtca 139 |||||||||||||| || || || ||||| || ||||| ||| |||| |||||||||||| Sbjct: 50030 ggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtacaagtca 50089 Query: 140 ttttttgtggcattct 155 |||||||| ||||||| Sbjct: 50090 ttttttgttgcattct 50105 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 14 atcacattggaccgcgtatctctaaaacaaaaggt 48 ||||||||||| || |||||||||||||||||||| Sbjct: 49899 atcacattggatcgtgtatctctaaaacaaaaggt 49933
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 186 bits (94), Expect = 6e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 325 ggaattgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctgg 384 |||||||||||| || ||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 103476 ggaattgtcgcggttcattgcagctgggaagcttcactgcaagatcgataaggttgctgg 103535 Query: 385 tgtcctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagca 444 ||| |||||||| ||||||||||| || |||||||||||||||| ||||||||||||| Sbjct: 103536 tgttctggagacaaaccgacctgacgctaggaatgccttctaccaagcgaccatcaagca 103595 Query: 445 gggagacttcctgctgaatcgcatacagaagctgtcgcgagtcattgacctgta 498 || |||||| ||||||| ||||| ||||| ||||| |||||||||||| |||| Sbjct: 103596 aggggacttcttgctgaaccgcatccagaaactgtcacgagtcattgacttgta 103649 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 156 ctggcctgacggagcagatcaagttagaccgatacttgcaaccacatttccgctacttca 215 ||||| ||||||||||||| ||||| || || || | || || ||||||||||||| | Sbjct: 103193 ctggcatgacggagcagattaagttggatcgctatcttcagcctcatttccgctactata 103252 Query: 216 tgcgtgaagtgcgcactgttgtctattcgcagttccttgagtcatacaagagtgtgacaa 275 || | |||||||| || ||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 103253 tgagggaagtgcggaccgttgtctattcacagtttttggagtcatacaagagtgtgacaa 103312 Query: 276 tggaggcaatggctgccgcatttggtgtgacagttgatttcatagaccag 325 |||| || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 103313 tggaagcgatggccgcagcatttggtgtgactgttgatttcatagaccag 103362 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 80 ggcaaagtacctcacctctcggaatttctcaattccctctacgattgtcagtacaagtca 139 |||||||||||||| || || || ||||| || ||||| ||| |||| |||||||||||| Sbjct: 103022 ggcaaagtacctcatctatctgagtttctgaactccctttacaattgccagtacaagtca 103081 Query: 140 ttttttgtggcattct 155 |||||||| ||||||| Sbjct: 103082 ttttttgttgcattct 103097 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 14 atcacattggaccgcgtatctctaaaacaaaaggt 48 ||||||||||| || |||||||||||||||||||| Sbjct: 102891 atcacattggatcgtgtatctctaaaacaaaaggt 102925
>ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.1 mRNA, complete cds Length = 1595 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1099 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1158 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1159 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1218 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1219 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1268
>ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.2 mRNA, complete cds Length = 1462 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1099 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1158 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1159 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1218 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1219 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1268
>gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 (RPN7) mRNA, complete cds Length = 1421 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1009 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1068 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1069 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1128 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1129 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1178
>gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence Length = 1161 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 973 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1032 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1033 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1092 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1093 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1142
>gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884) putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1443 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1026 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1085 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1086 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1145 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1146 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1195
>gb|AY093269.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1446 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 976 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1035 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1036 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1095 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1096 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1145
>gb|AY054500.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820; F6I7.30) mRNA, complete cds Length = 1595 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1099 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1158 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1159 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1218 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1219 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1268
>gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete sequence Length = 1482 Score = 123 bits (62), Expect = 8e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1079 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1138 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgcacggaatgccttctaccag 430 || |||||||| ||||| ||||||| ||||| ||||||||| |||||| | |||||| Sbjct: 1139 gacaaggttgcaggtgttttggagacaaaccgtcctgatgcaaagaatgcactttaccag 1198 Query: 431 tcgaccatcaagcagggagacttcctgctgaatcgcatacagaagctgtc 480 | || |||||||| || || ||| |||| || || || ||||||||||| Sbjct: 1199 gcaacaatcaagcaaggggatttcttgctaaaccgaatccagaagctgtc 1248
>emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZB05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 311 gatttcatagaccaggaattgtcgcgctttattgctgctgggaaacttcactgcaagatt 370 ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 997 gatttcatagaccaggagttgtcgcgcttcattgctgctgggaagcttcactgtaagata 1056 Query: 371 gataaggttgctggtgtcctggagacgaaccgacctgatgca 412 || |||||||| ||||| ||||||| ||||| ||||||||| Sbjct: 1057 gacaaggttgcaggtgttttggagacaaaccgtcctgatgca 1098
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 329 ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 388 ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 64947 ttgtcgcgcttcattgctgctgggaagcttcactgtaagatagacaaggttgcaggtgtt 64888 Query: 389 ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 448 ||||||| ||||| ||||||||| |||||| | |||||| | || |||||||| || Sbjct: 64887 ttggagacaaaccgtcctgatgcaaagaatgcactttaccaggcaacaatcaagcaaggg 64828 Query: 449 gacttcctgctgaatcgcatacagaagctgtc 480 || ||| |||| || || || ||||||||||| Sbjct: 64827 gatttcttgctaaaccgaatccagaagctgtc 64796
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 329 ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 388 ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 35523 ttgtcgcgcttcattgctgctgggaagcttcactgtaagatagacaaggttgcaggtgtt 35464 Query: 389 ctggagacgaaccgacctgatgcacggaatgccttctaccagtcgaccatcaagcaggga 448 ||||||| ||||| ||||||||| |||||| | |||||| | || |||||||| || Sbjct: 35463 ttggagacaaaccgtcctgatgcaaagaatgcactttaccaggcaacaatcaagcaaggg 35404 Query: 449 gacttcctgctgaatcgcatacagaagctgtc 480 || ||| |||| || || || ||||||||||| Sbjct: 35403 gatttcttgctaaaccgaatccagaagctgtc 35372
>gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||||||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtgtattcgcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL91ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 487 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 329 ttgtcgcgctttattgctgctgggaaacttcactgcaagattgataaggttgctggtgtc 388 |||||||||||||||||||||||||| |||||||| || || | |||||||| ||| | Sbjct: 5 ttgtcgcgctttattgctgctgggaagcttcactgtaaaataaacaaggttgcaggtttt 64 Query: 389 ctggagacgaaccgacctgatgca 412 ||||||| ||||| ||||||||| Sbjct: 65 ttggagacaaaccgtcctgatgca 88
>gb|DQ087931.1| Larix potaninii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087930.1| Larix griffithiana probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 861 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087929.1| Larix mastersiana probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087928.1| Larix gmelinii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087927.1| Larix occidentalis probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087925.1| Larix sibirica probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 889 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087924.1| Larix kaempferi probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087923.1| Larix decidua probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|DQ087922.1| Larix laricina probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 188 tacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcgcag 247 |||||||| |||||||| || || | |||| | ||||| ||||||||||| ||||| ||| Sbjct: 216 tacttgcatccacattttcgatattacatgagagaagtccgcactgttgtatattctcag 275 Query: 248 ttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || || || || ||||||||||| || |||||||| ||||| Sbjct: 276 tttctagaatcctacaagagtgtaaccatggaggctatggc 316
>gb|AF051233.1|AF051233 Picea mariana KIAA0107-like protein (Sb46) mRNA, partial cds Length = 980 Score = 56.0 bits (28), Expect = 2e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 125 tgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagttagac 184 ||||| ||||||||||| ||||| || || ||||||||||||| || || | || || Sbjct: 325 tgtcaatacaagtcattctttgtcgcctttgctggcctgacggatcaaataagattggat 384 Query: 185 cgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctattcg 244 || |||||||| |||||||| || || | ||| | ||||| || |||||||| ||||| Sbjct: 385 cgctacttgcatccacattttcgatattatatgagagaagtccgtactgttgtgtattct 444 Query: 245 cagttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 ||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 445 cagtttctagaatcctacaagagtgtaaccatggaagctatggc 488
>gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence Length = 1278 Score = 48.1 bits (24), Expect = 0.037 Identities = 201/260 (77%) Strand = Plus / Plus Query: 233 gttgtctattcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggctgcc 292 ||||| ||||| |||||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 855 gttgtgtattcccagttcctggagtcctacaagagtgttactattgaggccatggccaag 914 Query: 293 gcatttggtgtgacagttgatttcatagaccaggaattgtcgcgctttattgctgctggg 352 || ||||| ||| | | |||||||| ||| |||| | || || || ||||| |||||| Sbjct: 915 gcttttggggtgtctgaggatttcatcgacttggaactatctcggttcattgcagctggg 974 Query: 353 aaacttcactgcaagattgataaggttgctggtgtcctggagacgaaccgacctgatgca 412 || | || |||||||||||||| || || || || |||| || || || ||||||||| Sbjct: 975 aagttgcattgcaagattgataaagtagcaggagtattggaaactaatcgtcctgatgca 1034 Query: 413 cggaatgccttctaccagtcgaccatcaagcagggagacttcctgctgaatcgcatacag 472 |||||| | || ||| | || |||||||| || |||||| || |||||||||| || Sbjct: 1035 aagaatgctctttatcaggcaactatcaagcaaggggacttcttgttgaatcgcattcaa 1094 Query: 473 aagctgtcgcgagtcattga 492 ||||| || || |||||||| Sbjct: 1095 aagctttctcgtgtcattga 1114 Score = 46.1 bits (23), Expect = 0.15 Identities = 131/167 (78%) Strand = Plus / Plus Query: 122 gattgtcagtacaagtcattttttgtggcattctctggcctgacggagcagatcaagtta 181 |||||||| |||||||||||||| ||||| ||||| ||| |||||| || || || Sbjct: 744 gattgtcaatacaagtcatttttctcagcatttgctggcttgatggagcatattaaattg 803 Query: 182 gaccgatacttgcaaccacatttccgctacttcatgcgtgaagtgcgcactgttgtctat 241 || || |||||||||||||| ||| | || | ||| | || || | || ||||| ||| Sbjct: 804 gatcgttacttgcaaccacacttcagatattatatgagggaggtcagaacagttgtgtat 863 Query: 242 tcgcagttccttgagtcatacaagagtgtgacaatggaggcaatggc 288 || |||||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 864 tcccagttcctggagtcctacaagagtgttactattgaggccatggc 910
>ref|NM_025550.2| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (Psmd6), mRNA Length = 1313 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1030 tttattgctgctggaagactccactgcaaaattgataa 1067
>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence Length = 225423 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 10403 tttattgctgctggaagactccactgcaaaattgataa 10440
>dbj|AK010287.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400006A19 product:PROTEASOME REGULATORY PARTICLE SUBUNIT P44S10 homolog [Homo sapiens], full insert sequence Length = 1329 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1063 tttattgctgctggaagactccactgcaaaattgataa 1100
>dbj|AK002343.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610008K13 product:PROTEASOME REGULATORY PARTICLE SUBUNIT P44S10 homolog [Homo sapiens], full insert sequence Length = 1331 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1066 tttattgctgctggaagactccactgcaaaattgataa 1103
>gb|BC006869.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 6, mRNA (cDNA clone MGC:6476 IMAGE:2646325), complete cds Length = 1313 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1030 tttattgctgctggaagactccactgcaaaattgataa 1067
>gb|AC154515.2| Mus musculus BAC clone RP24-81I13 from chromosome 14, complete sequence Length = 172475 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 143656 tttattgctgctggaagactccactgcaaaattgataa 143693
>dbj|AK211149.1| Mus musculus cDNA, clone:Y2G0120M22, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022256, based on BLAT search Length = 381 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 308 tttattgctgctggaagactccactgcaaaattgataa 345
>dbj|AK206699.1| Mus musculus cDNA, clone:Y2G0105K15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022256, based on BLAT search Length = 326 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 150 tttattgctgctggaagactccactgcaaaattgataa 187
>dbj|AK183447.1| Mus musculus cDNA, clone:Y0G0125O22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022256, based on BLAT search Length = 418 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 242 tttattgctgctggaagactccactgcaaaattgataa 279
>dbj|AK178742.1| Mus musculus cDNA, clone:Y0G0107M03, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022256, based on BLAT search Length = 432 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 309 tttattgctgctggaagactccactgcaaaattgataa 346
>emb|AJ252147.1|MMU252147 Mus musculus mRNA for putative KIAA0107 homologue (KIAA0107 gene) Length = 1335 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 tttattgctgctgggaaacttcactgcaagattgataa 375 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1066 tttattgctgctggaagactccactgcaaaattgataa 1103
>gb|BC108599.1| Xenopus laevis cDNA clone MGC:131117 IMAGE:7983247, complete cds Length = 1368 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 434 accatcaagcagggagacttcctgctgaatcgcatacagaa 474 |||||||||||||||||| | ||||| || ||||| ||||| Sbjct: 1185 accatcaagcagggagacctgctgctcaaccgcatccagaa 1225
>emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chromosome 11 Contains the Akap1 gene for A kinase (PRKA) anchor protein 1, complete sequence Length = 76410 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 tttggagcagctccttggcac 535 ||||||||||||||||||||| Sbjct: 17539 tttggagcagctccttggcac 17559
>dbj|AK033468.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030214A21 product:unclassifiable, full insert sequence Length = 1684 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 tttggagcagctccttggcac 535 ||||||||||||||||||||| Sbjct: 616 tttggagcagctccttggcac 636
>emb|BX248514.3| Zebrafish DNA sequence from clone CH211-237A6 in linkage group 1, complete sequence Length = 165693 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 599 tattgcattttgcgtttcaaa 619 ||||||||||||||||||||| Sbjct: 153856 tattgcattttgcgtttcaaa 153876
>gb|U42580.4|PBU42580 Paramecium bursaria Chlorella virus 1, complete genome Length = 330743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tggtgtgacagttgatttca 317 |||||||||||||||||||| Sbjct: 316683 tggtgtgacagttgatttca 316702
>gb|AC131329.13| Mus musculus chromosome 13, clone RP23-474B11, complete sequence Length = 172830 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gattgtcagtacaagtcatt 141 |||||||||||||||||||| Sbjct: 143632 gattgtcagtacaagtcatt 143651
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 atttcatagaccaggaattg 331 |||||||||||||||||||| Sbjct: 198109 atttcatagaccaggaattg 198128
>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence Length = 224351 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 acccaagcttcccttacaag 566 |||||||||||||||||||| Sbjct: 64940 acccaagcttcccttacaag 64959
>gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence Length = 233720 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctgacggagcagatcaagtt 180 |||||||||||||||||||| Sbjct: 49883 ctgacggagcagatcaagtt 49864
>emb|AL138897.10| Human DNA sequence from clone RP11-231D11 on chromosome 10, complete sequence Length = 59779 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 cctcacctctcggaatttctcaat 112 ||||||||| |||||||||||||| Sbjct: 33059 cctcacctcacggaatttctcaat 33036
>emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30 Length = 233755 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ctgacggagcagatcaagtt 180 |||||||||||||||||||| Sbjct: 69934 ctgacggagcagatcaagtt 69953
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcggaatttctcaattccct 117 |||||||||||||||||||| Sbjct: 4070891 tcggaatttctcaattccct 4070910
>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence Length = 195714 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gattgtcagtacaagtcatt 141 |||||||||||||||||||| Sbjct: 191121 gattgtcagtacaagtcatt 191102
>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence Length = 203330 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 aagactttgctttggttcct 583 |||||||||||||||||||| Sbjct: 68679 aagactttgctttggttcct 68660
>emb|BX927282.4| Zebrafish DNA sequence from clone DKEY-49O11 in linkage group 5, complete sequence Length = 204699 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 attgcattttgcgtttcaaa 619 |||||||||||||||||||| Sbjct: 132831 attgcattttgcgtttcaaa 132812
>gb|AC074198.6| Homo sapiens BAC clone RP11-75A5 from 4, complete sequence Length = 182178 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 tacaagactttgctttggtt 580 |||||||||||||||||||| Sbjct: 114266 tacaagactttgctttggtt 114285
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 434 accatcaagcagggagacttcctgctgaatcgcatacagaagctgtcgcgagtcat 489 ||||||||| |||| ||||| |||||||| | | |||||||||||| ||||||| Sbjct: 62491 accatcaagaagggcgacttgctgctgaacagagtccagaagctgtcgagagtcat 62436
>gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence Length = 153415 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 atttcatagaccaggaattg 331 |||||||||||||||||||| Sbjct: 77618 atttcatagaccaggaattg 77637
>gb|AC148053.3| Carollia perspicillata clone 594J14, complete sequence Length = 125844 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cacaaccctaccctacccaa 552 |||||||||||||||||||| Sbjct: 59923 cacaaccctaccctacccaa 59904
>dbj|AP006147.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36E18, TM0288, complete sequence Length = 112234 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ggctgccgcatttggtgtga 305 |||||||||||||||||||| Sbjct: 99911 ggctgccgcatttggtgtga 99930
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cacaaccctaccctacccaa 552 |||||||||||||||||||| Sbjct: 1112141 cacaaccctaccctacccaa 1112122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,803,590 Number of Sequences: 3902068 Number of extensions: 4803590 Number of successful extensions: 86738 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 86510 Number of HSP's gapped (non-prelim): 224 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
