ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags38a14 |
|---|---|
| Clone Library Name | barley_pub |
>YH6B_SCHPO (Q9P7X4) Hypothetical serine-rich protein P23A10.11c precursor| Length = 507 Score = 37.0 bits (84), Expect = 0.029 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = -3 Query: 297 LGCLSCTTMDKDAAPVP--TLAEYMLSEVSSLQPSG-VTELTSSANWMVST*ALVPSSIL 127 L LS + D AA V T+A + S V + S ++ + SA VST ++PSSI+ Sbjct: 169 LASLSSASTDNLAASVTPTTVAASVASSVDTDSASATISSVVDSATSSVST--VIPSSII 226 Query: 126 SEVPPDAADEVDRSLPLSTGSTMPPEAST 40 S PPD+A E S P ST ++T Sbjct: 227 SAAPPDSASE---STPASTSYASSTTSAT 252
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 33.9 bits (76), Expect = 0.24 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = -3 Query: 324 SSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVT--ELTSSANWMVST* 151 +S T TD+ L TT K + +PT S +S S T +TSS + ST Sbjct: 167 TSTTPSTDITSALPTTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTT 226 Query: 150 ALVPSSILSEVPPDAADEVDRSLPLSTGSTMPPEAST 40 + S + + S P+ST +T ST Sbjct: 227 SSTLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTST 263
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 31.6 bits (70), Expect = 1.2 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Frame = -3 Query: 342 STFCDISSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWM 163 S+ ++S T+E+ S TT + +APVPT + S+ P+ + T S++ Sbjct: 678 SSSAPVTSSTTESSSAPVTSSTT-ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAP 736 Query: 162 VST*ALVPSSILSE---VPPDAADEVDRSLPLSTGSTMPPEAST 40 V T PSS +E P ++ S P+ T S+ E+S+ Sbjct: 737 VPT----PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 776 Score = 31.2 bits (69), Expect = 1.6 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Frame = -3 Query: 324 SSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSL--QPSGVTELTSSANWMVST* 151 SS T+E+ S TT + +APVPT + S+ PS T +SSA + Sbjct: 741 SSSTTESSSAPVTSSTT-ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSS 799 Query: 150 ALVPSSILSEVPPDAADEVDRSLPLSTGSTMPPEAST 40 + SS+ P ++ + S P ST + E+S+ Sbjct: 800 STTESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSS 836 Score = 30.4 bits (67), Expect = 2.7 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 3/99 (3%) Frame = -3 Query: 324 SSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*AL 145 SS T+E+ S TT + +APVPT + S+ P+ + T S++ V T Sbjct: 615 SSSTTESSSAPVTSSTT-ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPT--- 670 Query: 144 VPSSILSE---VPPDAADEVDRSLPLSTGSTMPPEASTP 37 PSS +E P ++ S P+++ +T A P Sbjct: 671 -PSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVP 708 Score = 30.4 bits (67), Expect = 2.7 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Frame = -3 Query: 324 SSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*AL 145 SS T+E+ S TT + +APVPT + SS S T +TSS S Sbjct: 531 SSSTTESSSAPVTSSTT-ESSSAPVPTPS-------SSTTESSSTPVTSSTTESSSAPVP 582 Query: 144 VPSSILSE-----VP-PDAADEVDRSLPLSTGSTMPPEAST 40 PSS +E VP P ++ S P T S+ E+S+ Sbjct: 583 TPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSS 623 Score = 30.4 bits (67), Expect = 2.7 Identities = 26/96 (27%), Positives = 43/96 (44%) Frame = -3 Query: 324 SSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*AL 145 SS T+E+ S TT + +APVPT + S+ P+ + T S++ V++ Sbjct: 489 SSSTTESSSAPVTSSTT-ESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTT 547 Query: 144 VPSSILSEVPPDAADEVDRSLPLSTGSTMPPEASTP 37 SS P + E S P+++ +T A P Sbjct: 548 ESSSAPVPTPSSSTTE-SSSTPVTSSTTESSSAPVP 582 Score = 30.4 bits (67), Expect = 2.7 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 3/110 (2%) Frame = -3 Query: 342 STFCDISSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWM 163 S+ ++S T+E+ S TT + +APVPT + SS S +TSS Sbjct: 429 SSSAPVTSSTTESSSAPVTSSTT-ESSSAPVPTPS-------SSTTESSSAPVTSSTTES 480 Query: 162 VST*ALVPSSILSE---VPPDAADEVDRSLPLSTGSTMPPEASTPLCRVP 22 S PSS +E P ++ S P+ T S+ E+S+ P Sbjct: 481 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTP 530 Score = 29.6 bits (65), Expect = 4.6 Identities = 27/96 (28%), Positives = 42/96 (43%) Frame = -3 Query: 324 SSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*AL 145 SS T+E+ S TT + +APVPT + S+ S TE +SSA + + Sbjct: 462 SSSTTESSSAPVTSSTT-ESSSAPVPTPSSSTTESSSAPVTSSTTE-SSSAPVPTPSSST 519 Query: 144 VPSSILSEVPPDAADEVDRSLPLSTGSTMPPEASTP 37 SS P ++ S P+++ +T A P Sbjct: 520 TESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVP 555 Score = 29.6 bits (65), Expect = 4.6 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -3 Query: 342 STFCDISSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTE-----LTS 178 S+ ++S T+E+ S TT + +APVPT + S+ S TE +TS Sbjct: 366 SSSAPVTSSTTESSSAPVTSSTT-ESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTS 424 Query: 177 SANWMVST*ALVPSSILSEVPPDAADEVDRSLPLSTGSTMPPEAST 40 S S ++ S P ++ S P+ T S+ E+S+ Sbjct: 425 STTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 470 Score = 29.3 bits (64), Expect = 6.0 Identities = 22/82 (26%), Positives = 38/82 (46%) Frame = -3 Query: 285 SCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*ALVPSSILSEVPPDA 106 S +T + +APVPT + S+ P+ + T S++ V++ SS P + Sbjct: 585 SSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 644 Query: 105 ADEVDRSLPLSTGSTMPPEAST 40 E S P+ T S+ E+S+ Sbjct: 645 TTE-SSSAPVPTPSSSTTESSS 665 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/82 (26%), Positives = 38/82 (46%) Frame = -3 Query: 285 SCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*ALVPSSILSEVPPDA 106 S +T + +APVPT + S+ P+ + T S++ V++ SS P + Sbjct: 711 SSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 770 Query: 105 ADEVDRSLPLSTGSTMPPEAST 40 E S P+ T S+ E+S+ Sbjct: 771 TTE-SSSAPVPTPSSSTTESSS 791 Score = 28.9 bits (63), Expect = 7.8 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%) Frame = -3 Query: 285 SCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTE-----LTSSANWMVST*ALVPSSILSE 121 S +T + +APVPT + S+ S TE +TSS S PSS +E Sbjct: 657 SSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 716 Query: 120 -----VP-PDAADEVDRSLPLSTGSTMPPEAST 40 VP P ++ S P+ T S+ E+S+ Sbjct: 717 SSSAPVPTPSSSTTESSSAPVPTPSSSTTESSS 749
>SOX_RABIT (P79371) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 30.4 bits (67), Expect = 2.7 Identities = 30/89 (33%), Positives = 39/89 (43%) Frame = -1 Query: 341 PHSVTYHH*HQKQICLVVYLAPQWTRMLHLCLH*QNTCFQKYHHYSHLELLN*LPQQTGW 162 PHS H Q +I YL +TRM+H C+Q + H E L +QTG Sbjct: 42 PHSRGSSH-GQSRIIRKAYLEDFYTRMMH-------ECYQIWAQLEH-EAGTQLHRQTGL 92 Query: 161 FLLEHWYHQVYCLKSHQMQLMRWTVHYHC 75 LL +Q LK+ Q L R V + C Sbjct: 93 LLLGMKENQE--LKTIQANLSRQRVEHQC 119
>SOX_HUMAN (Q9P0Z9) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 30.4 bits (67), Expect = 2.7 Identities = 30/89 (33%), Positives = 39/89 (43%) Frame = -1 Query: 341 PHSVTYHH*HQKQICLVVYLAPQWTRMLHLCLH*QNTCFQKYHHYSHLELLN*LPQQTGW 162 PHS H Q +I YL +TRM+H C+Q + H E L +QTG Sbjct: 42 PHSRGSSH-GQSRIIRKAYLEDFYTRMMH-------ECYQIWAQLEH-EAGTQLHRQTGL 92 Query: 161 FLLEHWYHQVYCLKSHQMQLMRWTVHYHC 75 LL +Q LK+ Q L R V + C Sbjct: 93 LLLGMKENQE--LKTIQANLSRQRVEHQC 119
>ESCO1_MOUSE (Q69Z69) N-acetyltransferase ESCO1 (EC 2.3.1.-) (Establishment of| cohesion 1 homolog 1) (ECO1 homolog 1) Length = 843 Score = 30.0 bits (66), Expect = 3.5 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -3 Query: 291 CLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*ALVPSSILSEVPP 112 CL T+ ++ PVP A+ + ++ S EL SA+ VST P L VP Sbjct: 229 CLQKTSRKEEIKPVPVTADIRKLKAATSVVSKKNELRKSAHTQVSTSTKRPQIPLPLVPE 288 Query: 111 DAADE 97 + D+ Sbjct: 289 HSDDQ 293
>BGLR_MOUSE (P12265) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 648 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 236 NTCFQKYHHYSHLELLN*LPQQTGWFLLEHWYHQVYCLKSHQMQLMR 96 N+ F YH Y HLE++ PQ F E+WY K+HQ +++ Sbjct: 498 NSYFSWYHDYGHLEVIQ--PQLNSQF--ENWY------KTHQKPIIQ 534
>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 29.6 bits (65), Expect = 4.6 Identities = 33/136 (24%), Positives = 54/136 (39%) Frame = -3 Query: 444 LSIVLMPSDAXRLLGEVPRDGTITXMDLLCF*VASTFCDISSLTSETDLLGCLSCTTMDK 265 LS+ D + V +GT+T S C +T D + L T K Sbjct: 279 LSLPRKTKDRRLVSISVGTEGTVTR---------SVACQTDLVTENADHMKKLPLTMPVK 329 Query: 264 DAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMVST*ALVPSSILSEVPPDAADEVDRS 85 + P ++ V + + A++ A VP+ PP +A++++ + Sbjct: 330 PSTGSPLVSANAKGSVCTSATMARPGIDRQASYGDLIGASVPA-----FPPPSANKIEEN 384 Query: 84 LPLSTGSTMPPEASTP 37 P STGST P +STP Sbjct: 385 GP-STGSTPDPTSSTP 399
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 29.3 bits (64), Expect = 6.0 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -3 Query: 342 STFCDISSLTSETDLLGCLSCTTMDKDAAPVPTLAEYMLSEVSSLQPSGVTELT--SSAN 169 +T ISS S + L + TT A+ + A+Y SSL PS T SSAN Sbjct: 240 ATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQY---NTSSLLPSSTPSSTPLSSAN 296 Query: 168 WMVST*ALVP--SSILSEVPPDAADEVDRSLPLSTGSTMPPEASTPLCRV 25 +T A +S+ S A+ S+ + +T +STPL V Sbjct: 297 STTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSV 346
>ST14_MOUSE (P56677) Suppressor of tumorigenicity protein 14 (EC 3.4.21.-)| (Serine protease 14) (Epithin) Length = 855 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 120 VPPDAADEVDRSLPLSTGSTMPPEA 46 +PP A+EVDR++ + T+PP A Sbjct: 161 IPPHLAEEVDRAMAVERVVTLPPRA 185
>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)| Length = 2798 Score = 28.9 bits (63), Expect = 7.8 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Frame = -3 Query: 273 MDKDAAPVPTLAEYMLSEVSSLQPSGVTELTSSANWMV-----ST*ALVPSSILSEVPPD 109 ++K A PV L + L +V L + SS + S + S+L E+PP+ Sbjct: 989 LNKGAKPVVVLQKLSLDDVQKLIKDREEKSRSSLKSIKNKPSKSNKGSIDQSVLKELPPE 1048 Query: 108 AADEVDRSLPL 76 E++ ++PL Sbjct: 1049 LLAEIESTMPL 1059
>GLPK_MYCPE (Q8EVD0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 507 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 1 TSSGSITWDSTERGACFGWHRGS 69 T G+ WDS+ RGA FG RG+ Sbjct: 356 TGLGAPYWDSSSRGAIFGLERGT 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,406,429 Number of Sequences: 219361 Number of extensions: 1312173 Number of successful extensions: 3644 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3464 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3634 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
