ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags38a14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468240.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, co... 44 0.43
5gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, co... 44 0.43
6gb|AY741093.1| Integration vector pJK202, complete sequence 42 1.7
7gb|AY820185.1| Broad-host-range Red recombinase expression plasm... 42 1.7
8gb|AY804024.1| Binary vector pGA643, complete sequence 42 1.7
9gb|AY214164.3| Escherichia coli plasmid pAPEC-O2-R, complete seq... 42 1.7
10ref|XM_512099.1| PREDICTED: Pan troglodytes similar to KIAA1328 ... 42 1.7
11gb|DQ205472.1| Salmonella typhimurium strain MSPS4 tetracycline ... 42 1.7
12gb|AY333434.1| Salmonella typhimurium plasmid pU302L, complete s... 42 1.7
13gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence 42 1.7
14gb|AY444815.1| Pseudomonas aeruginosa Sul1 (sul1) gene, partial ... 42 1.7
15gb|AY608912.1| Escherichia coli plasmid pFL129, complete sequence 42 1.7
16ref|NM_020776.1| Homo sapiens KIAA1328 (KIAA1328), mRNA 42 1.7
17gb|DQ151884.1| Activation tagging vector pGA2772, complete sequence 42 1.7
18gb|AY308000.1| Insertional expression vector pCM172, complete se... 42 1.7
19gb|AY307999.1| Insertional cloning vector pCM168, complete sequence 42 1.7
20emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome 42 1.7
21emb|AJ517790.2|ASA517790 Aeromonas salmonicida partial drug resi... 42 1.7
22gb|U75324.1|CVU75324 Cloning vector pJB3Tc20, complete sequence 42 1.7
23gb|U82001.1|EVU82001 Expression vector pJB866, complete sequence 42 1.7
24gb|AY204478.1| Cloning vector pRK442(H), complete sequence 42 1.7
25gb|AY204477.1| Cloning vector pRK442, complete sequence 42 1.7
26gb|AY204476.1| Cloning vector pRK437, complete sequence 42 1.7
27gb|AY204475.1| Cloning vector pRK404, complete sequence 42 1.7
28gb|AF327720.1| Cloning vector pCM132, complete sequence 42 1.7
29gb|AF327719.1| Cloning vector pCM130, complete sequence 42 1.7
30gb|AF327718.1| Cloning vector pCM110, complete sequence 42 1.7
31gb|AF327717.1| Cloning vector pCM160, complete sequence 42 1.7
32gb|AF327716.1| Cloning vector pCM80, complete sequence 42 1.7
33gb|AF327715.1| Cloning vector pCM66, complete sequence 42 1.7
34gb|AF327714.1| Cloning vector pCM62, complete sequence 42 1.7
35gb|AF327713.1| Cloning vector pCM51, complete sequence 42 1.7
36gb|AF327712.1| Cloning vector pRK310, complete sequence 42 1.7
37gb|AF327711.1| Cloning vector pDN19, complete sequence 42 1.7
38gb|AY373338.1| Binary vector pGA1611, complete sequence 42 1.7
39gb|AF542061.1| Salmonella enteritidis expression vector pSY7K pu... 42 1.7
40gb|AY196695.1| Acinetobacter baumannii Tn1721-like transposon tr... 42 1.7
41emb|X75761.1|PATETA Pseudomonas aeruginosa plasmid RP4 tetA and ... 42 1.7
42emb|X61367.1|TN1721DNA Gram-negative bacteria Transposon Tn1721;... 42 1.7
43emb|X00006.1|ECPRPT E.coli plasmid RP1 tetracycline resistance (... 42 1.7
44gb|AF534183.1| Shigella sonnei plasmid pSS4 antimicrobial resist... 42 1.7
45emb|CR376602.1| plasmid pFBAOT6 from Aeromonas punctata (Aeromon... 42 1.7
46gb|BC037903.1| Homo sapiens KIAA1328, mRNA (cDNA clone IMAGE:527... 42 1.7
47emb|AJ698325.1| Uncultured bacterium multiresistance plasmid pRS... 42 1.7
48emb|AJ634602.1| Salmonella enterica subsp. enterica serovar Typh... 42 1.7
49emb|AJ628353.1| Salmonella enterica plasmid 6/9 multidrug resist... 42 1.7
50emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multire... 42 1.7
51emb|AJ851293.1| Cloning vector pRU1212 gusA gene, gfpmut3.1 gene... 42 1.7
52emb|AJ851292.1| Cloning vector pRU1156 gusA gene for beta-glucur... 42 1.7
53emb|AJ851291.1| Cloning vector pRU1161 gusA gene for beta-glucur... 42 1.7
54emb|AJ851290.1| Cloning vector pRU1076 gusA gene for beta-glucur... 42 1.7
55emb|AJ851289.1| Cloning vector pRU1075 gusA gene for beta-glucur... 42 1.7
56emb|AJ851288.1| Cloning vector pRU1064 gfpUV gene for green fluo... 42 1.7
57gb|AF497970.1| Shigella sonnei plasmid pKKTET7, complete sequence 42 1.7
58gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, com... 42 1.7
59gb|AY218787.1| Cloning vector pAJ1, complete sequence 42 1.7
60gb|BC008670.1|BC008670 Homo sapiens, clone IMAGE:3874150, mRNA 42 1.7
61gb|AC096589.1| Homo sapiens BAC clone RP11-744G10 from 2, comple... 42 1.7
62gb|AY532632.1| Cloning vector pLAFR, complete sequence 42 1.7
63dbj|AB201314.1| Cloning vector pSB4U DNA, complete sequence 42 1.7
64dbj|AB027255.2| Cloning vector pSB1 tetR, tetA genes with Agroba... 42 1.7
65gb|AF502943.1| Shigella sonnei plasmid pSSTAV TetR class A varia... 42 1.7
66gb|AC005146.1| Homo sapiens 12 PAC RP1-157K6 (Roswell Park Cance... 42 1.7
67gb|AY186543.1| Vibrio cholerae tetracycline resistance protein A... 42 1.7
68gb|DQ314493.1| Haloquadratum walsbyi clone 2B08 sequence 42 1.7
69gb|U73849.1|XXU73849 Synthetic transposon Tn5-OT182 carrier plas... 42 1.7
70gb|AY947640.1| Escherichia coli strain WYPE531 tetracycline resi... 42 1.7
71gb|AF133830.1|AF133830 Shuttle vector pME6030, complete sequence 42 1.7
72gb|AF133829.1|AF133829 Shuttle vector pME6012, complete sequence 42 1.7
73gb|AF133828.1|AF133828 Shuttle vector pME6011, complete sequence 42 1.7
74gb|AF118811.1|AF118811 Shuttle vector pME6031, complete sequence 42 1.7
75gb|AF118810.1|AF118810 Shuttle vector pME6010, complete sequence 42 1.7
76emb|BX648875.1|HSM809026 Homo sapiens mRNA; cDNA DKFZp686O09238 ... 42 1.7
77dbj|AB027254.1| Cloning vector pSB4 tetR, tetA, hygromycin resis... 42 1.7
78emb|Y19119.1|SEN19119 Salmonella enterica serovar Dublin partial... 42 1.7
79emb|AJ313332.1|ECO313332 Escherichia coli plasmid pTOJO2 tetR ge... 42 1.7
80emb|AJ419171.1|ECO419171 Escherichia coli tetR gene, tet(A) gene... 42 1.7
81emb|AJ307714.1|ECO307714 Escherichia coli tetR gene for represso... 42 1.7
82gb|AF184978.1|AF184978 Binary vector pCLD04541, complete sequence 42 1.7
83gb|AY903253.1| Laribacter hongkongensis tetracycline resistance ... 42 1.7
84emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Mu... 42 1.7
85dbj|AB114188.1| Vibrio cholerae DNA, integrating antibiotic resi... 42 1.7
86dbj|AB043476.1| Shuttle vector pNIT6012 DNA, complete sequence 42 1.7
87dbj|AB043475.1| Shuttle vector pNIT6011 DNA, complete sequence 42 1.7
88dbj|AB043474.1| Shuttle vector pNIT6010 DNA, complete sequence 42 1.7
89gb|AY509004.1| Salmonella enterica subsp. enterica serovar Chole... 42 1.7
90emb|AL832625.2|HSM803935 Homo sapiens mRNA; cDNA DKFZp451C1618 (... 42 1.7
91emb|AJ877266.1| Bordetella bronchiseptica plasmid pKBB4037, tetr... 42 1.7
92emb|CR391931.7| Zebrafish DNA sequence from clone DKEY-267P8 in ... 42 1.7
93emb|AM183165.1| Bordetella bronchiseptica plasmid pKBB958, isola... 42 1.7
94gb|L29404.1|ECOMERTET E. coli mercuric reductase (merA) gene; me... 42 1.7
95gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, R... 42 1.7
96dbj|AB037749.2| Homo sapiens mRNA for KIAA1328 protein, partial cds 42 1.7
97gb|AC121299.16| Mus musculus chromosome 17, clone RP23-402P8, co... 40 6.6
98gb|AC162944.4| Mus musculus BAC clone RP23-76L8 from chromosome ... 40 6.6
99gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome... 40 6.6
100gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosom... 40 6.6
101emb|AL356860.17| Human DNA sequence from clone RP4-815A16 on chr... 40 6.6
102emb|BX927088.11| Zebrafish DNA sequence from clone CH211-212M21 ... 40 6.6
103gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome... 40 6.6
104gb|AC113410.2| Homo sapiens chromosome 5 clone RP11-485M7, compl... 40 6.6
105gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chrom... 40 6.6
106emb|BX323828.7| Zebrafish DNA sequence from clone DKEY-102M7 in ... 40 6.6
107gb|AC006345.4|AC006345 Homo sapiens PAC clone RP4-791N16 from 14... 40 6.6
108gb|AC004674.1| Homo sapiens X BAC GSHB-600G8 (Genome Systems Hum... 40 6.6
109emb|AL442663.3|CNS07ECV Human chromosome 14 DNA sequence BAC R-1... 40 6.6
110emb|CT030179.8| Mouse DNA sequence from clone RP24-466G2 on chro... 40 6.6
111emb|CT025659.7| Mouse DNA sequence from clone RP24-86F23 on chro... 40 6.6
112dbj|AP006115.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.6
113emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chr... 40 6.6
114gb|J03744.1|RABPLP2 Rabbit myelin P2 mRNA, complete cds 40 6.6 
>ref|XM_468240.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4110

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                        
Query: 381  ttccatctcgagggacttctccaagaaggcggnttgcatctgatggcattaatactatgc 440
            |||||||||||||  ||  ||||||||||||  |||||||||| ||| ||  ||||||  
Sbjct: 2825 ttccatctcgaggtgctagtccaagaaggcgacttgcatctgaaggctttggtactatat 2884

                                          
Query: 441  ttaaaagcatggattttgctgagaaagata 470
              ||||||||||||||| ||||||||||||
Sbjct: 2885 acaaaagcatggatttttctgagaaagata 2914



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 401  ccaagaaggcggnttgcatctgatggcatt 430
            |||||||||||| |||||||||||||||||
Sbjct: 1687 ccaagaaggcggcttgcatctgatggcatt 1716



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                        
Query: 170  tttgctgaggaagttaattcagtaactccagatggctgtagtgatgatacttctgaaagc 229
            |||||| |||||||||||  || ||| |||||||| |||| || | ||| ||| ||||||
Sbjct: 2614 tttgctcaggaagttaatatagcaaccccagatggttgtaatggtcatatttcagaaagc 2673

                     
Query: 230  atgtattct 238
            ||| |||||
Sbjct: 2674 atggattct 2682
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                            
Query: 381      ttccatctcgagggacttctccaagaaggcggnttgcatctgatggcattaatactatgc 440
                |||||||||||||  ||  ||||||||||||  |||||||||| ||| ||  ||||||  
Sbjct: 33773179 ttccatctcgaggtgctagtccaagaaggcgacttgcatctgaaggctttggtactatat 33773238

                                              
Query: 441      ttaaaagcatggattttgctgagaaagata 470
                  ||||||||||||||| ||||||||||||
Sbjct: 33773239 acaaaagcatggatttttctgagaaagata 33773268



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 401      ccaagaaggcggnttgcatctgatggcatt 430
                |||||||||||| |||||||||||||||||
Sbjct: 33772041 ccaagaaggcggcttgcatctgatggcatt 33772070



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                            
Query: 170      tttgctgaggaagttaattcagtaactccagatggctgtagtgatgatacttctgaaagc 229
                |||||| |||||||||||  || ||| |||||||| |||| || | ||| ||| ||||||
Sbjct: 33772968 tttgctcaggaagttaatatagcaaccccagatggttgtaatggtcatatttcagaaagc 33773027

                         
Query: 230      atgtattct 238
                ||| |||||
Sbjct: 33773028 atggattct 33773036
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0700F06
          Length = 139277

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                          
Query: 381    ttccatctcgagggacttctccaagaaggcggnttgcatctgatggcattaatactatgc 440
              |||||||||||||  ||  ||||||||||||  |||||||||| ||| ||  ||||||  
Sbjct: 104046 ttccatctcgaggtgctagtccaagaaggcgacttgcatctgaaggctttggtactatat 104105

                                            
Query: 441    ttaaaagcatggattttgctgagaaagata 470
                ||||||||||||||| ||||||||||||
Sbjct: 104106 acaaaagcatggatttttctgagaaagata 104135



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 401    ccaagaaggcggnttgcatctgatggcatt 430
              |||||||||||| |||||||||||||||||
Sbjct: 102908 ccaagaaggcggcttgcatctgatggcatt 102937



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                          
Query: 170    tttgctgaggaagttaattcagtaactccagatggctgtagtgatgatacttctgaaagc 229
              |||||| |||||||||||  || ||| |||||||| |||| || | ||| ||| ||||||
Sbjct: 103835 tttgctcaggaagttaatatagcaaccccagatggttgtaatggtcatatttcagaaagc 103894

                       
Query: 230    atgtattct 238
              ||| |||||
Sbjct: 103895 atggattct 103903
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>gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, complete sequence
          Length = 191464

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 436    tatgcttaaaagcatggatttt 457
              ||||||||||||||||||||||
Sbjct: 166639 tatgcttaaaagcatggatttt 166618
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>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence
          Length = 173602

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 436   tatgcttaaaagcatggatttt 457
             ||||||||||||||||||||||
Sbjct: 47484 tatgcttaaaagcatggatttt 47463
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>gb|AY741093.1| Integration vector pJK202, complete sequence
          Length = 53204

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1984 tgcttgcttcgggtggcatcg 2004
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>gb|AY820185.1| Broad-host-range Red recombinase expression plasmid pRKcIRed,
            complete sequence
          Length = 10790

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7168 tgcttgcttcgggtggcatcg 7188
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>gb|AY804024.1| Binary vector pGA643, complete sequence
          Length = 11601

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7737 tgcttgcttcgggtggcatcg 7717
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>gb|AY214164.3| Escherichia coli plasmid pAPEC-O2-R, complete sequence
          Length = 101375

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 82173 tgcttgcttcgggtggcatcg 82153
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>ref|XM_512099.1| PREDICTED: Pan troglodytes similar to KIAA1328 protein (LOC455381),
           mRNA
          Length = 1188

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 atgctcaagtagaaaccatccagtt 171
           |||||||||||| ||||||||||||
Sbjct: 290 atgctcaagtaggaaccatccagtt 266
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>gb|DQ205472.1| Salmonella typhimurium strain MSPS4 tetracycline resistance protein
           (tetA) gene, partial cds
          Length = 492

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  tgcttgcttcgggtggcatcg 62
           |||||||||||||||||||||
Sbjct: 163 tgcttgcttcgggtggcatcg 183
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>gb|AY333434.1| Salmonella typhimurium plasmid pU302L, complete sequence
          Length = 84514

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 72106 tgcttgcttcgggtggcatcg 72086
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>gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence
          Length = 92353

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 6128 tgcttgcttcgggtggcatcg 6108
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>gb|AY444815.1| Pseudomonas aeruginosa Sul1 (sul1) gene, partial cds; QacEdelta1
            (qacEdelta1) and VEB-1a (blaVEB-1) genes, complete cds;
            and Sul1 (sul1) gene, partial cds
          Length = 4487

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 3053 tgcttgcttcgggtggcatcg 3033
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>gb|AY608912.1| Escherichia coli plasmid pFL129, complete sequence
          Length = 6464

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4454 tgcttgcttcgggtggcatcg 4434
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>ref|NM_020776.1| Homo sapiens KIAA1328 (KIAA1328), mRNA
          Length = 4875

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 atgctcaagtagaaaccatccagtt 171
           |||||||||||| ||||||||||||
Sbjct: 663 atgctcaagtaggaaccatccagtt 639
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>gb|DQ151884.1| Activation tagging vector pGA2772, complete sequence
          Length = 18249

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 14385 tgcttgcttcgggtggcatcg 14365
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>gb|AY308000.1| Insertional expression vector pCM172, complete sequence
          Length = 8396

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7796 tgcttgcttcgggtggcatcg 7816
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>gb|AY307999.1| Insertional cloning vector pCM168, complete sequence
          Length = 8074

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7474 tgcttgcttcgggtggcatcg 7494
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>emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome
          Length = 68869

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 5507 tgcttgcttcgggtggcatcg 5527
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>emb|AJ517790.2|ASA517790 Aeromonas salmonicida partial drug resistance plasmid pRAS1
          Length = 11663

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 8155 tgcttgcttcgggtggcatcg 8175
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>gb|U75324.1|CVU75324 Cloning vector pJB3Tc20, complete sequence
          Length = 7069

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1535 tgcttgcttcgggtggcatcg 1555
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>gb|U82001.1|EVU82001 Expression vector pJB866, complete sequence
          Length = 8296

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4717 tgcttgcttcgggtggcatcg 4737
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>gb|AY204478.1| Cloning vector pRK442(H), complete sequence
          Length = 9820

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4663 tgcttgcttcgggtggcatcg 4683
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>gb|AY204477.1| Cloning vector pRK442, complete sequence
          Length = 9816

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4659 tgcttgcttcgggtggcatcg 4679
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>gb|AY204476.1| Cloning vector pRK437, complete sequence
          Length = 10041

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4783 tgcttgcttcgggtggcatcg 4803
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>gb|AY204475.1| Cloning vector pRK404, complete sequence
          Length = 11237

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4783 tgcttgcttcgggtggcatcg 4803
to top
>gb|AF327720.1| Cloning vector pCM132, complete sequence
          Length = 11299

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 8719 tgcttgcttcgggtggcatcg 8739
to top
>gb|AF327719.1| Cloning vector pCM130, complete sequence
          Length = 7965

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 5385 tgcttgcttcgggtggcatcg 5405
to top
>gb|AF327718.1| Cloning vector pCM110, complete sequence
          Length = 5834

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 3254 tgcttgcttcgggtggcatcg 3274
to top
>gb|AF327717.1| Cloning vector pCM160, complete sequence
          Length = 7974

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 5394 tgcttgcttcgggtggcatcg 5414
to top
>gb|AF327716.1| Cloning vector pCM80, complete sequence
          Length = 7245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4665 tgcttgcttcgggtggcatcg 4685
to top
>gb|AF327715.1| Cloning vector pCM66, complete sequence
          Length = 7607

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 5027 tgcttgcttcgggtggcatcg 5047
to top
>gb|AF327714.1| Cloning vector pCM62, complete sequence
          Length = 6878

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4298 tgcttgcttcgggtggcatcg 4318
to top
>gb|AF327713.1| Cloning vector pCM51, complete sequence
          Length = 5329

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 2749 tgcttgcttcgggtggcatcg 2769
to top
>gb|AF327712.1| Cloning vector pRK310, complete sequence
          Length = 19041

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 12559 tgcttgcttcgggtggcatcg 12579
to top
>gb|AF327711.1| Cloning vector pDN19, complete sequence
          Length = 7827

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 4205 tgcttgcttcgggtggcatcg 4225
to top
>gb|AY373338.1| Binary vector pGA1611, complete sequence
          Length = 13476

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 9612 tgcttgcttcgggtggcatcg 9592
to top
>gb|AF542061.1| Salmonella enteritidis expression vector pSY7K putative transposase,
            dihydropteroate synthase (sulII), streptomycin resistance
            protein A (strA), streptomycin resistance protein B
            (strB), truncated tetracycline resistance repressor
            protein (tetR), and tetracycline resistance protein A
            (tetA) genes, complete cds
          Length = 7719

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 6582 tgcttgcttcgggtggcatcg 6602
to top
>gb|AY196695.1| Acinetobacter baumannii Tn1721-like transposon transposase (tnpA)
            gene, partial cds; transposase (tnp), TetR (tetR), and
            TetA (tetA) genes, complete cds; and tnp (tnp) gene,
            partial cds
          Length = 7077

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 5348 tgcttgcttcgggtggcatcg 5368
to top
>emb|X75761.1|PATETA Pseudomonas aeruginosa plasmid RP4 tetA and tetR genes
          Length = 2446

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1984 tgcttgcttcgggtggcatcg 2004
to top
>emb|X61367.1|TN1721DNA Gram-negative bacteria Transposon Tn1721; tetA, tetR, tnpA, tnpR
            genes
          Length = 11139

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7619 tgcttgcttcgggtggcatcg 7639
to top
>emb|X00006.1|ECPRPT E.coli plasmid RP1 tetracycline resistance (tet) determinants:
            regulatory gene tetR and resistance gene tetA
          Length = 2709

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 2253 tgcttgcttcgggtggcatcg 2273
to top
>gb|AF534183.1| Shigella sonnei plasmid pSS4 antimicrobial resistance determining
            region, partial sequence
          Length = 8384

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 3971 tgcttgcttcgggtggcatcg 3991
to top
>emb|CR376602.1| plasmid pFBAOT6 from Aeromonas punctata (Aeromonas caviae) HGB5,
             complete sequence
          Length = 84749

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 80294 tgcttgcttcgggtggcatcg 80314
to top
>gb|BC037903.1| Homo sapiens KIAA1328, mRNA (cDNA clone IMAGE:5276411), complete
           cds
          Length = 1886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 atgctcaagtagaaaccatccagtt 171
           |||||||||||| ||||||||||||
Sbjct: 487 atgctcaagtaggaaccatccagtt 463
to top
>emb|AJ698325.1| Uncultured bacterium multiresistance plasmid pRSB101
          Length = 47829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 42  tgcttgcttcgggtggcatcg 62
           |||||||||||||||||||||
Sbjct: 277 tgcttgcttcgggtggcatcg 257
to top
>emb|AJ634602.1| Salmonella enterica subsp. enterica serovar Typhimurium plasmid
            pFPTB1 delta tnpA, ORF294, tetA, tetR, blaTEM, tnpR and
            tnp genes
          Length = 12656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 5986 tgcttgcttcgggtggcatcg 5966
to top
>emb|AJ628353.1| Salmonella enterica plasmid 6/9 multidrug resistance island
          Length = 13324

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 12487 tgcttgcttcgggtggcatcg 12507
to top
>emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multiresistance plasmid pB10
          Length = 64508

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 48945 tgcttgcttcgggtggcatcg 48965
to top
>emb|AJ851293.1| Cloning vector pRU1212 gusA gene, gfpmut3.1 gene and ccdB gene
          Length = 14829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 9163 tgcttgcttcgggtggcatcg 9183
to top
>emb|AJ851292.1| Cloning vector pRU1156 gusA gene for beta-glucuronidase and gfpmut3.1
            gene for green fluorescent protein mut3.1
          Length = 13116

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7475 tgcttgcttcgggtggcatcg 7495
to top
>emb|AJ851291.1| Cloning vector pRU1161 gusA gene for beta-glucuronidase and mRFP1
            gene for mono Red fluorescent protein
          Length = 13079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7438 tgcttgcttcgggtggcatcg 7458
to top
>emb|AJ851290.1| Cloning vector pRU1076 gusA gene for beta-glucuronidase and dsRedT4
            gene for Ds Red fluorescent protein T4
          Length = 13079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7438 tgcttgcttcgggtggcatcg 7458
to top
>emb|AJ851289.1| Cloning vector pRU1075 gusA gene for beta-glucuronidase and dsRedT3
            gene for Ds Red fluorescent protein T3
          Length = 13079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7438 tgcttgcttcgggtggcatcg 7458
to top
>emb|AJ851288.1| Cloning vector pRU1064 gfpUV gene for green fluorescent protein UV
            and gusA gene for beta-glucuronidase
          Length = 13103

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7462 tgcttgcttcgggtggcatcg 7482
to top
>gb|AF497970.1| Shigella sonnei plasmid pKKTET7, complete sequence
          Length = 8401

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 2155 tgcttgcttcgggtggcatcg 2175
to top
>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 147   atgctcaagtagaaaccatccagtt 171
             |||||||||||| ||||||||||||
Sbjct: 69467 atgctcaagtaggaaccatccagtt 69443
to top
>gb|AY218787.1| Cloning vector pAJ1, complete sequence
          Length = 28708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 25078 tgcttgcttcgggtggcatcg 25098
to top
>gb|BC008670.1|BC008670 Homo sapiens, clone IMAGE:3874150, mRNA
          Length = 1592

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 atgctcaagtagaaaccatccagtt 171
           |||||||||||| ||||||||||||
Sbjct: 89  atgctcaagtaggaaccatccagtt 65
to top
>gb|AC096589.1| Homo sapiens BAC clone RP11-744G10 from 2, complete sequence
          Length = 157143

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   cttctgaaagcatgtattctg 239
             |||||||||||||||||||||
Sbjct: 13741 cttctgaaagcatgtattctg 13721
to top
>gb|AY532632.1| Cloning vector pLAFR, complete sequence
          Length = 20352

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 15477 tgcttgcttcgggtggcatcg 15457
to top
>dbj|AB201314.1| Cloning vector pSB4U DNA, complete sequence
          Length = 41385

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 24489 tgcttgcttcgggtggcatcg 24509
to top
>dbj|AB027255.2| Cloning vector pSB1 tetR, tetA genes with Agrobacterium tumefaciens DNA
             insert
          Length = 36909

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 20013 tgcttgcttcgggtggcatcg 20033
to top
>gb|AF502943.1| Shigella sonnei plasmid pSSTAV TetR class A variant (tetR), TetA
            (tetA(Av)), hypothetical protein, hypothetical protein,
            hypothetical protein, hypothetical protein, and
            hypothetical protein genes, complete cds
          Length = 4674

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1985 tgcttgcttcgggtggcatcg 2005
to top
>gb|AC005146.1| Homo sapiens 12 PAC RP1-157K6 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 157653

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 149    gctcaagtagaaaccatccag 169
              |||||||||||||||||||||
Sbjct: 155244 gctcaagtagaaaccatccag 155264
to top
>gb|AY186543.1| Vibrio cholerae tetracycline resistance protein A (tetA) gene,
           partial cds
          Length = 700

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  tgcttgcttcgggtggcatcg 62
           |||||||||||||||||||||
Sbjct: 562 tgcttgcttcgggtggcatcg 582
to top
>gb|DQ314493.1| Haloquadratum walsbyi clone 2B08 sequence
          Length = 38670

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    tcctgtggacaatggtagtga 87
             |||||||||||||||||||||
Sbjct: 15002 tcctgtggacaatggtagtga 15022
to top
>gb|U73849.1|XXU73849 Synthetic transposon Tn5-OT182 carrier plasmid pOT182, complete
             sequence
          Length = 18658

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 11347 tgcttgcttcgggtggcatcg 11367
to top
>gb|AY947640.1| Escherichia coli strain WYPE531 tetracycline resistance protein
           (tetA) gene, partial cds
          Length = 393

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  tgcttgcttcgggtggcatcg 62
           |||||||||||||||||||||
Sbjct: 119 tgcttgcttcgggtggcatcg 139
to top
>gb|AF133830.1|AF133830 Shuttle vector pME6030, complete sequence
          Length = 8021

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7717 tgcttgcttcgggtggcatcg 7737
to top
>gb|AF133829.1|AF133829 Shuttle vector pME6012, complete sequence
          Length = 8270

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7970 tgcttgcttcgggtggcatcg 7990
to top
>gb|AF133828.1|AF133828 Shuttle vector pME6011, complete sequence
          Length = 8270

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7970 tgcttgcttcgggtggcatcg 7990
to top
>gb|AF118811.1|AF118811 Shuttle vector pME6031, complete sequence
          Length = 8310

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7996 tgcttgcttcgggtggcatcg 8016
to top
>gb|AF118810.1|AF118810 Shuttle vector pME6010, complete sequence
          Length = 8270

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7970 tgcttgcttcgggtggcatcg 7990
to top
>emb|BX648875.1|HSM809026 Homo sapiens mRNA; cDNA DKFZp686O09238 (from clone DKFZp686O09238)
          Length = 1866

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 atgctcaagtagaaaccatccagtt 171
           |||||||||||| ||||||||||||
Sbjct: 555 atgctcaagtaggaaccatccagtt 531
to top
>dbj|AB027254.1| Cloning vector pSB4 tetR, tetA, hygromycin resistance genes with
             Agrobacterium tumefaciens DNA insert
          Length = 39902

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 23006 tgcttgcttcgggtggcatcg 23026
to top
>emb|Y19119.1|SEN19119 Salmonella enterica serovar Dublin partial tetA gene for
           tetracycline resistance protein
          Length = 954

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  tgcttgcttcgggtggcatcg 62
           |||||||||||||||||||||
Sbjct: 902 tgcttgcttcgggtggcatcg 922
to top
>emb|AJ313332.1|ECO313332 Escherichia coli plasmid pTOJO2 tetR gene for repressor protein and
            tet(A) gene for tetracycline resistance protein class A
          Length = 2883

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1915 tgcttgcttcgggtggcatcg 1935
to top
>emb|AJ419171.1|ECO419171 Escherichia coli tetR gene, tet(A) gene and delta tnpA gene (partial)
          Length = 7755

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 3757 tgcttgcttcgggtggcatcg 3777
to top
>emb|AJ307714.1|ECO307714 Escherichia coli tetR gene for repressor protein and tet(A) gene for
            tetracycline resistance protein of class A
          Length = 2655

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1852 tgcttgcttcgggtggcatcg 1872
to top
>gb|AF184978.1|AF184978 Binary vector pCLD04541, complete sequence
          Length = 27608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 22247 tgcttgcttcgggtggcatcg 22227
to top
>gb|AY903253.1| Laribacter hongkongensis tetracycline resistance protein A (tetA)
            gene, complete cds
          Length = 1266

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 1001 tgcttgcttcgggtggcatcg 1021
to top
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in
             Acinetobacter baumannii
          Length = 100001

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 60638 tgcttgcttcgggtggcatcg 60658
to top
>dbj|AB114188.1| Vibrio cholerae DNA, integrating antibiotic resistance gene element
          Length = 23402

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 16802 tgcttgcttcgggtggcatcg 16822
to top
>dbj|AB043476.1| Shuttle vector pNIT6012 DNA, complete sequence
          Length = 8620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7970 tgcttgcttcgggtggcatcg 7990
to top
>dbj|AB043475.1| Shuttle vector pNIT6011 DNA, complete sequence
          Length = 8620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7970 tgcttgcttcgggtggcatcg 7990
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>dbj|AB043474.1| Shuttle vector pNIT6010 DNA, complete sequence
          Length = 8620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 7970 tgcttgcttcgggtggcatcg 7990
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>gb|AY509004.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
            plasmid pSC138, complete sequence
          Length = 138742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 2788 tgcttgcttcgggtggcatcg 2768
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>emb|AL832625.2|HSM803935 Homo sapiens mRNA; cDNA DKFZp451C1618 (from clone DKFZp451C1618);
           complete cds
          Length = 4873

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 atgctcaagtagaaaccatccagtt 171
           |||||||||||| ||||||||||||
Sbjct: 664 atgctcaagtaggaaccatccagtt 640
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>emb|AJ877266.1| Bordetella bronchiseptica plasmid pKBB4037, tetracycline resistance
            gene region, isolate V4037/8
          Length = 11165

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 6918 tgcttgcttcgggtggcatcg 6938
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>emb|CR391931.7| Zebrafish DNA sequence from clone DKEY-267P8 in linkage group 23,
             complete sequence
          Length = 136484

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   ggatgcaactcaaaaacataa 360
             |||||||||||||||||||||
Sbjct: 44534 ggatgcaactcaaaaacataa 44514
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>emb|AM183165.1| Bordetella bronchiseptica plasmid pKBB958, isolate 958
          Length = 4336

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 2733 tgcttgcttcgggtggcatcg 2753
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>gb|L29404.1|ECOMERTET E. coli mercuric reductase (merA) gene; merD gene; URF1; URF2;
            invasin (ORFA) gene; ORFB; and tetracycline resistance
            protein (tetA) gene
          Length = 4585

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   tgcttgcttcgggtggcatcg 62
            |||||||||||||||||||||
Sbjct: 3912 tgcttgcttcgggtggcatcg 3892
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>gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, RK2, RP1, RP4) complete genome
          Length = 60099

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tgcttgcttcgggtggcatcg 62
             |||||||||||||||||||||
Sbjct: 14975 tgcttgcttcgggtggcatcg 14995
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>dbj|AB037749.2| Homo sapiens mRNA for KIAA1328 protein, partial cds
          Length = 5520

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 147  atgctcaagtagaaaccatccagtt 171
            |||||||||||| ||||||||||||
Sbjct: 1055 atgctcaagtaggaaccatccagtt 1031
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>gb|AC121299.16| Mus musculus chromosome 17, clone RP23-402P8, complete sequence
          Length = 217287

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   tggatgcaactcaaaaacataaca 362
             ||||| ||||||||||||||||||
Sbjct: 63390 tggattcaactcaaaaacataaca 63413
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>gb|AC162944.4| Mus musculus BAC clone RP23-76L8 from chromosome 13, complete sequence
          Length = 155927

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ggcacaggtgcagcatcctt 267
             ||||||||||||||||||||
Sbjct: 37371 ggcacaggtgcagcatcctt 37352
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>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence
          Length = 241514

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ggcacaggtgcagcatcctt 267
             ||||||||||||||||||||
Sbjct: 27642 ggcacaggtgcagcatcctt 27661
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>gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosome 1, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    caggtgcagcatccttgtcc 271
              ||||||||||||||||||||
Sbjct: 121432 caggtgcagcatccttgtcc 121451
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>emb|AL356860.17| Human DNA sequence from clone RP4-815A16 on chromosome 11, complete
             sequence
          Length = 62871

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   aactcaaaaacataacagat 365
             ||||||||||||||||||||
Sbjct: 33277 aactcaaaaacataacagat 33296
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>emb|BX927088.11| Zebrafish DNA sequence from clone CH211-212M21 in linkage group 2,
             complete sequence
          Length = 201361

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   aactccagatggctgtagtg 212
             ||||||||||||||||||||
Sbjct: 30021 aactccagatggctgtagtg 30002
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>gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome 12, complete sequence
          Length = 201217

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   tgcttaaaagcatggatttt 457
             ||||||||||||||||||||
Sbjct: 81384 tgcttaaaagcatggatttt 81365
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>gb|AC113410.2| Homo sapiens chromosome 5 clone RP11-485M7, complete sequence
          Length = 123851

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 331   acagaatgtggatgcaactcaaaaacat 358
             |||||||||||||| | |||||||||||
Sbjct: 35846 acagaatgtggatgaacctcaaaaacat 35873
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>gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chromosome unknown,
             complete sequence
          Length = 180977

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 331   acagaatgtggatgcaactcaaaaacat 358
             |||||||||||||| | |||||||||||
Sbjct: 16052 acagaatgtggatgaacctcaaaaacat 16079
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>emb|BX323828.7| Zebrafish DNA sequence from clone DKEY-102M7 in linkage group 14,
             complete sequence
          Length = 206011

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   gcatggattttgctgagaaa 466
             ||||||||||||||||||||
Sbjct: 29320 gcatggattttgctgagaaa 29301
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>gb|AC006345.4|AC006345 Homo sapiens PAC clone RP4-791N16 from 14q24.3, complete sequence
          Length = 125508

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 296   agcagatctgtttctgatgtcagt 319
             ||||||||||||||| ||||||||
Sbjct: 35019 agcagatctgtttctcatgtcagt 34996
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>gb|AC004674.1| Homo sapiens X BAC GSHB-600G8 (Genome Systems Human BAC library)
             complete sequence
          Length = 158886

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   aatgtggatgcaactcaaaaacat 358
             |||||||||| |||||||||||||
Sbjct: 23850 aatgtggatgaaactcaaaaacat 23827
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>emb|AL442663.3|CNS07ECV Human chromosome 14 DNA sequence BAC R-109N23 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165423

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 296   agcagatctgtttctgatgtcagt 319
             ||||||||||||||| ||||||||
Sbjct: 72433 agcagatctgtttctcatgtcagt 72410
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>emb|CT030179.8| Mouse DNA sequence from clone RP24-466G2 on chromosome 12, complete
            sequence
          Length = 44649

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  tgcttaaaagcatggatttt 457
            ||||||||||||||||||||
Sbjct: 4182 tgcttaaaagcatggatttt 4163
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>emb|CT025659.7| Mouse DNA sequence from clone RP24-86F23 on chromosome 17, complete
              sequence
          Length = 183855

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 339    tggatgcaactcaaaaacataaca 362
              ||||| ||||||||||||||||||
Sbjct: 119500 tggattcaactcaaaaacataaca 119523
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>dbj|AP006115.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT43M15, TM0198b,
             complete sequence
          Length = 65307

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   aaaacataacagatccatct 371
             ||||||||||||||||||||
Sbjct: 44159 aaaacataacagatccatct 44178
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>emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chromosome X, complete
             sequence
          Length = 196655

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aaagcatgtattctgctaat 244
             ||||||||||||||||||||
Sbjct: 88745 aaagcatgtattctgctaat 88726
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>gb|J03744.1|RABPLP2 Rabbit myelin P2 mRNA, complete cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 335  aatgtggatgcaactcaaaaacat 358
            |||||||||| |||||||||||||
Sbjct: 1692 aatgtggatgaaactcaaaaacat 1669


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,044,992
Number of Sequences: 3902068
Number of extensions: 4044992
Number of successful extensions: 69549
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69368
Number of HSP's gapped (non-prelim): 178
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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