ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37l12 |
|---|---|
| Clone Library Name | barley_pub |
>SOT1_SPIOL (Q41364) 2-oxoglutarate/malate translocator, chloroplast precursor| Length = 569 Score = 192 bits (488), Expect = 2e-49 Identities = 95/115 (82%), Positives = 102/115 (88%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+AYQFV FG S+LGLGYSLVF+EA LAPAIPSVSARAGGIFLPLVKSLC ACGS D Sbjct: 203 RIAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCIACGSNVGD 262 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLWAKA 346 GTERKLGAWLMLTCFQTSVISS+MFLTAMAANPL+A LT +TIG+ IGW WAKA Sbjct: 263 GTERKLGAWLMLTCFQTSVISSSMFLTAMAANPLSATLTFNTIGKAIGWMDWAKA 317
>YFLS_BACSU (O34726) Putative malate transporter yflS| Length = 478 Score = 129 bits (324), Expect = 2e-30 Identities = 65/115 (56%), Positives = 83/115 (72%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R++Y FV FG TLGL YSL+F++ L+PAIPS +ARAGGI P+++SL E GS + Sbjct: 114 RISYVFVQKFGKKTLGLSYSLLFSDLILSPAIPSNTARAGGIIFPIIRSLSETFGSSPAN 173 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLWAKA 346 GTERK+GA+L+ T FQ ++I+SAMFLTAMAANPL A L G + WT WA A Sbjct: 174 GTERKIGAFLLKTGFQGNLITSAMFLTAMAANPLIAKLAHDVAGVDLTWTSWAIA 228
>YBHI_ECOLI (P75763) Inner membrane protein ybhI| Length = 477 Score = 91.7 bits (226), Expect = 4e-19 Identities = 49/115 (42%), Positives = 69/115 (60%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+AY + G +TLGLGY VF + LAPA PS +ARAGGI LP++ S+ A GS + Sbjct: 111 RIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEK 170 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLWAKA 346 + R++G +LM++ + + +S MF TAMA N LA + + I W WA A Sbjct: 171 -SPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALA 224
>Y020_HAEIN (Q57048) Hypothetical protein HI0020| Length = 479 Score = 84.7 bits (208), Expect = 5e-17 Identities = 44/112 (39%), Positives = 65/112 (58%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+AY + A G +TL LGY +F + L+PA PS +AR+GGI P++ S+ A GS + Sbjct: 113 RIAYHMIGAMGSTTLRLGYVTMFLDLLLSPATPSNTARSGGIIFPIINSVVVALGS-DPE 171 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLW 337 + +K G +LM+ + +S +FLTAMA N LA +L +G W W Sbjct: 172 KSPKKAGRYLMMNVYMVVKTTSYIFLTAMAPNALALSLMAPILGFETTWIKW 223
>TTDT_ECOLI (P39414) Putative tartrate carrier (Tartrate transporter)| (Tartrate/succinate antiporter) Length = 487 Score = 78.6 bits (192), Expect = 4e-15 Identities = 42/112 (37%), Positives = 62/112 (55%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+A V G TL LGY+++F+E LAP PS SAR GI P++++L S+ +D Sbjct: 124 RIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPND 183 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLW 337 + R +G+++M ++SA+FLTAMA N L L S + W W Sbjct: 184 SSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW 235
>CITT_ECOLI (P0AE74) Citrate carrier (Citrate transporter) (Citrate/succinate| antiporter) Length = 487 Score = 72.4 bits (176), Expect = 3e-13 Identities = 40/112 (35%), Positives = 58/112 (51%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+A V G TL LGY++V + LAP PS +AR GG P++K+L S +D Sbjct: 125 RIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSFPND 184 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLW 337 + R++G +LM ++ +SS+MF+T A N L G I W W Sbjct: 185 PSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQW 236
>CITT_ECO57 (P0AE75) Citrate carrier (Citrate transporter) (Citrate/succinate| antiporter) Length = 487 Score = 72.4 bits (176), Expect = 3e-13 Identities = 40/112 (35%), Positives = 58/112 (51%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+A V G TL LGY++V + LAP PS +AR GG P++K+L S +D Sbjct: 125 RIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSFPND 184 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLW 337 + R++G +LM ++ +SS+MF+T A N L G I W W Sbjct: 185 PSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQW 236
>MEMP_RALEU (Q07252) Membrane protein| Length = 513 Score = 38.5 bits (88), Expect = 0.004 Identities = 29/112 (25%), Positives = 50/112 (44%) Frame = +2 Query: 2 RVAYQFVSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCEACGSRTDD 181 R+A +SA G ST + + L+ +PS +AR+ + +P++ + A G Sbjct: 149 RIALVTLSAIGTSTRRILIGTIAVTIALSLVVPSATARSACV-VPIMMGVIAAFGV---- 203 Query: 182 GTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLW 337 + + A +M+T Q + I + TA A N L +G+ I W W Sbjct: 204 DKKSNIAAGIMITVAQATSIWNVGIQTAAAQNLLTVGFMDKLLGERITWLQW 255
>AAAT_HUMAN (Q15758) Neutral amino acid transporter B(0) (ATB(0))| (Sodium-dependent neutral amino acid transporter type 2) (RD114/simian type D retrovirus receptor) (Baboon M7 virus receptor) Length = 541 Score = 35.4 bits (80), Expect = 0.035 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 9/104 (8%) Frame = +2 Query: 20 VSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSL------CEACGSRT-- 175 V+ G LGLG S L P S G + L L++ + C G Sbjct: 60 VAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASL 119 Query: 176 DDGTERKLGAWLMLTCFQTSVISSAMFL-TAMAANPLAANLTLS 304 D G +LGAW +L T++++SA+ + A+A P AA+ ++ Sbjct: 120 DPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAIN 163
>AAAT_BOVIN (Q95JC7) Neutral amino acid transporter B(0) (ATB(0))| (Sodium-dependent neutral amino acid transporter type 2) Length = 539 Score = 35.0 bits (79), Expect = 0.046 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%) Frame = +2 Query: 20 VSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSL------CEACGSRT-- 175 V+ G LGLG S L PA + G + L L+K + C G Sbjct: 61 VAVVAGVALGLGVSGAGGAFALGPARLEAFSFPGELLLRLLKMIILPLVVCSLIGGAASL 120 Query: 176 DDGTERKLGAWLMLTCFQTSVISSAMFL-TAMAANPLAANLTLST 307 D +LGAW +L T++++SA+ + A+A P AA ++T Sbjct: 121 DPSALGRLGAWALLFFLVTTLLASALGVGLALALQPGAAFAAINT 165
>AAAT_MOUSE (P51912) Neutral amino acid transporter B (Insulin-activated amino| acid transporter) (ASC-like Na(+)-dependent neutral amino acid transporter ASCT2) Length = 553 Score = 34.3 bits (77), Expect = 0.078 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 9/105 (8%) Frame = +2 Query: 35 GSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSL------CEACGSRT--DDGTE 190 G LGLG S L PA + A G + L L+K + C G D Sbjct: 64 GVGLGLGVSAAGGADALGPARLTRFAFPGELLLRLLKMIILPLVVCSLIGGAASLDPSAL 123 Query: 191 RKLGAWLMLTCFQTSVISSAMFL-TAMAANPLAANLTLSTIGQGI 322 ++GAW +L T++++SA+ + A+A P AA +++I + Sbjct: 124 GRVGAWALLFFLVTTLLASALGVGLALALKPGAAVTAITSINDSV 168
>AAAT_RABIT (O19105) Neutral amino acid transporter B(0) (ATB(0))| (Sodium-dependent neutral amino acid transporter type 2) Length = 541 Score = 33.9 bits (76), Expect = 0.10 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 13/111 (11%) Frame = +2 Query: 20 VSAFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSL------CEACGSRT-- 175 V+ G LGL S L PA A G + L L+K + C G Sbjct: 61 VAVVAGVALGLAVSGAGGALALGPARLIAFAFPGELLLRLLKMIILPLVVCSLVGGAASL 120 Query: 176 DDGTERKLGAWLMLTCFQTSVISSAMFL-TAMAANPLAA----NLTLSTIG 313 D +LGAW +L T++++SA+ + A+A P AA N +LS+ G Sbjct: 121 DPSALGRLGAWALLFFLVTTLLASALGVGLALALQPGAAFAAMNASLSSTG 171
>RNC_RHOCA (Q52698) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 228 Score = 30.8 bits (68), Expect = 0.86 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -3 Query: 204 APSFRSVPSSVRDPHASQRDFTSGRKMPPARAETEGIAGARNA 76 A +SV + RDP + +++ R +PP R ET G G +A Sbjct: 145 AARIQSVDNDARDPKTALQEWAQARGLPPPRYETLGRDGPDHA 187
>ZYG1_CAEBR (Q621J7) Probable serine/threonine-protein kinase zyg-1 (EC| 2.7.11.1) (Zygote defective protein 1) Length = 709 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = -3 Query: 171 RDPHASQRDFTSGRKMPPARAETEGIAGARN-----ASAKTSE*PRPSVEPPKA 25 R+P S RD S + PPAR+ ++ + R+ A+ + R SVEP +A Sbjct: 275 REPFRSSRDGISLERRPPARSSSQPVNSRRDPDGYRAAHEMPTTSRTSVEPDRA 328
>SYE_HALSA (Q9HQI1) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 586 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 226 PDVRHFVSDVPHGDGGQPACCQPHAQHHRAGDRVDAVGK 342 P+ H +VP DG A Q H +H GDR VG+ Sbjct: 436 PEESHEAVEVPVDDGPDEATPQVHPEHPDRGDREIPVGE 474
>KUP3_GEOSL (Q747C1) Probable potassium transport system protein kup 3| Length = 610 Score = 29.3 bits (64), Expect = 2.5 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 19/105 (18%) Frame = +2 Query: 26 AFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCE----------ACG--S 169 AF G +G SL+ +A + PAI +SA G + +P ++ L A G S Sbjct: 103 AFAGFLSFVGVSLLLGDAVITPAISILSAVEGLLLIPGLEGLSTGALVAIAAAIAIGLFS 162 Query: 170 RTDDGTERKLGAW--LMLTCFQTSVISSAMFLTAM-----AANPL 283 GT+R A+ +M F T ++ A+ +M A NPL Sbjct: 163 VQHKGTDRVASAFGPIMALWFGTLAVTGAVSAFSMPQIVEAINPL 207
>RL12_METTH (P05394) 50S ribosomal protein L12P ('A' type)|
Length = 101
Score = 29.3 bits (64), Expect = 2.5
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 140 VKSLCEACGSRTDDGTERKLGAWLMLTCFQTSVISSAMFLTAMAANPLAA 289
VKS+ EA G+ DD + L + + I AM TA+AA P AA
Sbjct: 22 VKSVLEAAGAEVDDARVKAL-----IAALEDVDIEEAMETTAVAAAPAAA 66
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.9 bits (63), Expect = 3.3 Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 5/111 (4%) Frame = -3 Query: 336 HSVHPIPCPMVLSV-----RLAASGLAAIAVRNIADEMTDVWKHVSMSQAPSFRSVPSSV 172 H P+P P + V + A + +T++ + QAP R+ S Sbjct: 156 HKTTPLPPPRLADVAPTPPKTPARKRGEEGTERMVQALTELLRRAQAPQAPRSRACEPST 215 Query: 171 RDPHASQRDFTSGRKMPPARAETEGIAGARNASAKTSE*PRPSVEPPKAET 19 P S R GR P R + + + A A P P V P K +T Sbjct: 216 --PRRS-RGRPPGRPAGPCRRKQQAVVVAEAAVTIPKPEPPPPVVPVKHQT 263
>IWS1_RAT (Q3SWT4) IWS1-like protein| Length = 764 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = -3 Query: 162 HASQRDFTSGRKMPPARAETEGIAGARNASAKTSE*PRP------SVEPPK 28 HAS + GRK + +ETE + + + + + PRP S EPPK Sbjct: 129 HASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPK 179
>S3TC1_HUMAN (Q8TE82) SH3 domain and tetratricopeptide repeats-containing| protein 1 Length = 1336 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -3 Query: 336 HSVHPIPCPMVLSVRLAASGLAAIAVRNIADEMTDV-WKHVSMSQAPSFRSVPSSVRDPH 160 +S H P + + A A VR I D + + W HV Q+P + SVRD Sbjct: 796 YSHHGCHGPAITFMTQAVEASAIAGVRAIVDHLVALAWLHVLHGQSPVALDILQSVRDAV 855 Query: 159 ASQRD 145 + D Sbjct: 856 VASED 860
>HEX_ADE16 (P36854) Hexon protein (Late protein 2)| Length = 940 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -3 Query: 231 VWKHVSMSQAPSFRSVPSSVRDP-HASQRDFTSGRKMPPARAETEGIAGAR 82 ++ +V++ S++ PS+V P + + D+ +GR +PP+ +T GAR Sbjct: 461 LYSNVALYLPDSYKYTPSNVTLPENKNTYDYMNGRVVPPSLVDTYVNIGAR 511
>TMM24_MOUSE (Q80X80) Transmembrane protein 24| Length = 706 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 162 VDRALTTAQSESSAPGSCSHASRRPS 239 V +TT SESS P + SH+S R S Sbjct: 474 VTEKMTTVLSESSGPSNASHSSSRES 499
>TPIS_MAIZE (P12863) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 28.1 bits (61), Expect = 5.6 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Frame = -3 Query: 303 LSVRLAASGLAAIAVRN--IADEMTDVWKHVSMSQAPSFR------SVPSSVRDPHASQR 148 L R A S + +A + IA+++ D W +V ++ P + + P+ ++ HAS R Sbjct: 131 LEQREAGSTMDVVAAQTKAIAEKIKD-WSNVVVAYEPVWAIGTGKVATPAQAQEVHASLR 189 Query: 147 DFTSGRKMPPARAETEGIAGARNASAKTSE 58 D+ P T I G +A E Sbjct: 190 DWLKTNASPEVAESTRIIYGGSVTAANCKE 219
>SPAA_STRDO (P21979) Cell surface antigen I/II precursor| Length = 1528 Score = 28.1 bits (61), Expect = 5.6 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = -3 Query: 204 APSFRSVPSSVRDPHASQRDFTSGRKMPPARAETEGIAGARNASAKTSE*PRPSVEPPKA 25 A S +V S P +D T+G+K P G A N T E P P VEP K Sbjct: 799 ATSATNVLSLAEMPQVPGKDNTAGKK-PNIWYSLNGKIRAVNVPKVTKEKPTPPVEPTKP 857 Query: 24 E 22 + Sbjct: 858 D 858
>KUP2_GEOSL (Q74AA5) Probable potassium transport system protein kup 2| Length = 605 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +2 Query: 26 AFGGSTLGLGYSLVFAEAFLAPAIPSVSARAGGIFLPLVKSLCE 157 AF G LG SL+ + + PAI +SA G +P ++ L + Sbjct: 97 AFAGFLAFLGVSLLLGDGVITPAISILSAVEGMRLIPGLEDLAQ 140
>STE2_SACKL (P12384) Pheromone alpha factor receptor| Length = 426 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 209 LMLTCFQTSVISSAMFLTAMAANPLAANLTLSTI 310 L++ FQT + S +F+ A A NP TL++I Sbjct: 247 LLIMSFQTLIFPSILFILAYALNPNQGTDTLTSI 280
>PAWR_HUMAN (Q96IZ0) PRKC apoptosis WT1 regulator protein (Prostate apoptosis| response-4 protein) (Par-4) Length = 340 Score = 27.7 bits (60), Expect = 7.3 Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 8/78 (10%) Frame = -2 Query: 334 QRPPDPLPDG--AEREVGSKRVGXXXXXXXXXRND------GRLEACEHEPGAELSLCAV 179 Q PP P P G + G G N+ G A PG CAV Sbjct: 34 QNPPGPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAAPAVPGPGGVNCAV 93 Query: 178 VSARSTRLAEGFHEREED 125 SA TR A G E++ Sbjct: 94 GSAMLTRAAPGPRRSEDE 111
>HAIR_HUMAN (O43593) Protein hairless| Length = 1189 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 11/68 (16%) Frame = -2 Query: 337 PQRPPDPLPDGAER-----------EVGSKRVGXXXXXXXXXRNDGRLEACEHEPGAELS 191 P+RPPDP P AE+ +G+K V DG +A +PG + Sbjct: 428 PKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDG--QASLQDPGLQDI 485 Query: 190 LCAVVSAR 167 C + A+ Sbjct: 486 PCLALPAK 493
>CN092_RAT (Q99PM1) Epidermal Langerhans cell protein LCP1| Length = 619 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = -3 Query: 219 VSMSQAPSFRSVPSSVRDPHASQRDFTSGRKMPP---ARAETEGIAGARNASAKTSE*PR 49 ++MSQ +P++V Q TS + P A+ T + A A+A + + P Sbjct: 379 ITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIATRSVLQAAAAAAASMQLPP 438 Query: 48 PSVEPP 31 P ++PP Sbjct: 439 PRLQPP 444
>RLUD_HAEIN (P44445) Ribosomal large subunit pseudouridine synthase D (EC| 5.4.99.-) (rRNA-uridine isomerase D) (rRNA pseudouridylate synthase D) Length = 324 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = +1 Query: 82 PRAGNPLG--LRAGWWHLPPAREIPLRGV 162 P AGNP G L A +H PP E+P G+ Sbjct: 105 PGAGNPNGTVLNALLYHYPPIVEVPRAGI 133
>PROS_DROVI (Q9U6A1) Protein prospero| Length = 1556 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%) Frame = +1 Query: 256 PHGD--GGQPACCQPHAQHH 309 PHG GGQP Q H QHH Sbjct: 1227 PHGPPHGGQPTAAQLHHQHH 1246
>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1579 Score = 27.7 bits (60), Expect = 7.3 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = -3 Query: 318 PCP-MVLSVRLAASGLAAIAVRNIADEMTDVWKHVSMSQAPSFRSVPSSVRDPHASQ--- 151 PCP +VLS +A S A V+ +ADE + +S A + S D A + Sbjct: 423 PCPPVVLSAAIARSPAVATEVQRVADEGESLRTCLS-KDAKEMQDKAESESDGQAEETAD 481 Query: 150 -RDFTSGRKMPPARAETEGIAGARNASAKTSE*PRPSVEPPKAE 22 + SGR P + T A + KT E R E +AE Sbjct: 482 PQSLHSGRSPAPVQTATT----APKSWKKTKEQTRTPDEVLEAE 521
>TUSC3_HUMAN (Q13454) Tumor suppressor candidate 3 (N33 protein)| Length = 348 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 246 DEMTDVWKHVSMSQAPSFRSVPSSVRDPHASQRD 145 DE TDV++ ++M+ AP+F P R A D Sbjct: 134 DEGTDVFQQLNMNSAPTFMHFPPKGRPKRADTFD 167
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/59 (28%), Positives = 22/59 (37%) Frame = -3 Query: 204 APSFRSVPSSVRDPHASQRDFTSGRKMPPARAETEGIAGARNASAKTSE*PRPSVEPPK 28 AP R SS H + PAR TE +A + + P P+ PPK Sbjct: 88 APPIRKATSSSEISHVKPSAPANPIPTSPARPSTESVAHPAPPTRPANPTPTPTSSPPK 146
>TPIS_SECCE (P46226) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 27.3 bits (59), Expect = 9.5 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Frame = -3 Query: 345 AFAHSVHPIPCP-MVLSVRLAASGLAAIA--VRNIADEMTDVWKHVSMSQAPSFR----- 190 A A + I C L R A S + +A + IAD++ D W +V ++ P + Sbjct: 116 ALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKD-WTNVVVAYEPVWAIGTGK 174 Query: 189 -SVPSSVRDPHASQRDFTSGRKMPPARAETEGIAGARNASAKTSE 58 + P+ ++ HA+ RD+ P T I G A E Sbjct: 175 VASPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKE 219
>MLP1_DROME (P53777) Muscle LIM protein 1| Length = 92 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 128 FLPLVKSLCEACGSRTDDGTERKLGAW-LMLTCFQTSVISSAM 253 F+P+ C ACG ER G + TCF+ S+ + A+ Sbjct: 3 FVPVETPKCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKAL 45
>ALG8_CAEEL (P52887) Probable dolichyl pyrophosphate Glc1Man9GlcNAc2| alpha-1,3-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase) Length = 758 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +2 Query: 206 WLMLTCFQTSVISSAMFLTAMAANPLAANLTLSTIGQGIGWTLWAKA 346 WL + + + + LTA+ L L ST G GI WAKA Sbjct: 463 WLWTSRLPFAPLMAISILTAIELTGLIGALIWSTFGDGIFEIWWAKA 509
>NCKX_DROME (Q9U6A0) Sodium/potassium/calcium exchanger| (Na(+)/K(+)/Ca(2+)-exchange protein) Length = 856 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 177 TTAQSESSAPGSCSHASRRPSFRQRCSSRR 266 T+A S +S+ G+ + PS R RC SRR Sbjct: 162 TSAASATSSRGASAEQLLHPSSRSRCRSRR 191 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,149,289 Number of Sequences: 219361 Number of extensions: 874502 Number of successful extensions: 3435 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3432 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)