| Clone Name | bags38a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 347 bits (175), Expect = 2e-92 Identities = 261/290 (90%) Strand = Plus / Minus Query: 136 cgacccaagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaacc 195 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 13030 cgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaacc 12971 Query: 196 atcaatgctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaag 255 ||||||||| | || || |||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 12970 atcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaag 12911 Query: 256 catttccagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtc 315 ||||| |||||| || ||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 12910 cattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtc 12851 Query: 316 ttcccttctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgat 375 |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 12850 ttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgat 12791 Query: 376 agaatgacaaancacagaggagcaattcaagtggtagcaaatcgtgtgcc 425 || |||||||| || || || || ||||||||||| |||||||||||||| Sbjct: 12790 aggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgcc 12741 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 16 atatatggccgggaagagctcctggtgaggttgcagggtgaagcggagtatattgtgagc 75 |||||||||||||| || ||| ||||||| |||||||||||||| ||||||||||||| | Sbjct: 13153 atatatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaac 13094 Query: 76 caaaaggg 83 |||||||| Sbjct: 13093 caaaaggg 13086
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 347 bits (175), Expect = 2e-92 Identities = 261/290 (90%) Strand = Plus / Minus Query: 136 cgacccaagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaacc 195 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 24779334 cgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaacc 24779275 Query: 196 atcaatgctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaag 255 ||||||||| | || || |||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 24779274 atcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaag 24779215 Query: 256 catttccagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtc 315 ||||| |||||| || ||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 24779214 cattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtc 24779155 Query: 316 ttcccttctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgat 375 |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 24779154 ttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgat 24779095 Query: 376 agaatgacaaancacagaggagcaattcaagtggtagcaaatcgtgtgcc 425 || |||||||| || || || || ||||||||||| |||||||||||||| Sbjct: 24779094 aggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgcc 24779045 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 16 atatatggccgggaagagctcctggtgaggttgcagggtgaagcggagtatattgtgagc 75 |||||||||||||| || ||| ||||||| |||||||||||||| ||||||||||||| | Sbjct: 24779457 atatatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaac 24779398 Query: 76 caaaaggg 83 |||||||| Sbjct: 24779397 caaaaggg 24779390
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 347 bits (175), Expect = 2e-92 Identities = 261/290 (90%) Strand = Plus / Minus Query: 136 cgacccaagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaacc 195 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 64746 cgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaacc 64687 Query: 196 atcaatgctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaag 255 ||||||||| | || || |||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 64686 atcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaag 64627 Query: 256 catttccagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtc 315 ||||| |||||| || ||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 64626 cattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtc 64567 Query: 316 ttcccttctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgat 375 |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 64566 ttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgat 64507 Query: 376 agaatgacaaancacagaggagcaattcaagtggtagcaaatcgtgtgcc 425 || |||||||| || || || || ||||||||||| |||||||||||||| Sbjct: 64506 aggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgcc 64457 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 16 atatatggccgggaagagctcctggtgaggttgcagggtgaagcggagtatattgtgagc 75 |||||||||||||| || ||| ||||||| |||||||||||||| ||||||||||||| | Sbjct: 64869 atatatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaac 64810 Query: 76 caaaaggg 83 |||||||| Sbjct: 64809 caaaaggg 64802
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 347 bits (175), Expect = 2e-92 Identities = 261/290 (90%) Strand = Plus / Minus Query: 136 cgacccaagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaacc 195 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 24869118 cgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaacc 24869059 Query: 196 atcaatgctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaag 255 ||||||||| | || || |||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 24869058 atcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaag 24868999 Query: 256 catttccagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtc 315 ||||| |||||| || ||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 24868998 cattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtc 24868939 Query: 316 ttcccttctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgat 375 |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 24868938 ttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgat 24868879 Query: 376 agaatgacaaancacagaggagcaattcaagtggtagcaaatcgtgtgcc 425 || |||||||| || || || || ||||||||||| |||||||||||||| Sbjct: 24868878 aggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgcc 24868829 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 16 atatatggccgggaagagctcctggtgaggttgcagggtgaagcggagtatattgtgagc 75 |||||||||||||| || ||| ||||||| |||||||||||||| ||||||||||||| | Sbjct: 24869241 atatatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaac 24869182 Query: 76 caaaaggg 83 |||||||| Sbjct: 24869181 caaaaggg 24869174
>dbj|AK103649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D01, full insert sequence Length = 1907 Score = 347 bits (175), Expect = 2e-92 Identities = 261/290 (90%) Strand = Plus / Plus Query: 136 cgacccaagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaacc 195 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 868 cgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaacc 927 Query: 196 atcaatgctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaag 255 ||||||||| | || || |||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 928 atcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaag 987 Query: 256 catttccagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtc 315 ||||| |||||| || ||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 988 cattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtc 1047 Query: 316 ttcccttctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgat 375 |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1048 ttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgat 1107 Query: 376 agaatgacaaancacagaggagcaattcaagtggtagcaaatcgtgtgcc 425 || |||||||| || || || || ||||||||||| |||||||||||||| Sbjct: 1108 aggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgcc 1157 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 16 atatatggccgggaagagctcctggtgaggttgcagggtgaagcggagtatattgtgagc 75 |||||||||||||| || ||| ||||||| |||||||||||||| ||||||||||||| | Sbjct: 745 atatatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaac 804 Query: 76 caaaaggg 83 |||||||| Sbjct: 805 caaaaggg 812
>gb|AF124737.1|AF124737 Zea mays clone CDAPG77 unknown mRNA Length = 1694 Score = 281 bits (142), Expect = 1e-72 Identities = 246/281 (87%) Strand = Plus / Plus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 473 aagcatgtagttgttggatttgttggctatccaaatgttgggaagagttcaactataaat 532 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || || ||||||| ||||||||| || || ||||||||||| || |||||| Sbjct: 533 gctttggttggcgagaagaggactggtgttactcacacacctggcaagacaaaacatttc 592 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||| Sbjct: 593 cagacactgataatctctgaagagctcactctttgtgattgccctggtctggtcttccct 652 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || ||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 653 tccttttcaagctcaaggcatgagatggtggcatgtggtgtgttgccgattgataggatg 712 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgt 422 ||||| ||| | | ||| ||||||||||| ||| ||||||| Sbjct: 713 acaaagcaccgggaagctattcaagtggtggcagatcgtgt 753
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 26369186 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 26369127 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 26369126 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 26369067 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 26369066 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 26369007 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 26369006 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 26368947 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 26368946 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 26368888 Query: 442 acag 445 |||| Sbjct: 26368887 acag 26368884
>dbj|AK103368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P14, full insert sequence Length = 1787 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 504 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 563 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 564 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 623 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 624 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 683 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 684 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 743 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 744 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 802 Query: 442 acag 445 |||| Sbjct: 803 acag 806
>dbj|AK101466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I12, full insert sequence Length = 2243 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 1011 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 1070 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 1071 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 1130 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 1131 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 1190 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 1191 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 1250 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 1251 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 1309 Query: 442 acag 445 |||| Sbjct: 1310 acag 1313
>dbj|AK060811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-H01, full insert sequence Length = 1583 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 351 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 410 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 411 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 470 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 471 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 530 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 531 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 590 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 591 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 649 Query: 442 acag 445 |||| Sbjct: 650 acag 653
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 26297355 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 26297296 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 26297295 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 26297236 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 26297235 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 26297176 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 26297175 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 26297116 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 26297115 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 26297057 Query: 442 acag 445 |||| Sbjct: 26297056 acag 26297053
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 133170 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 133111 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 133110 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 133051 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 133050 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 132991 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 132990 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 132931 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 132930 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 132872 Query: 442 acag 445 |||| Sbjct: 132871 acag 132868
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 272 bits (137), Expect = 9e-70 Identities = 263/304 (86%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 83459 aagcatgttgttgttggatttgttggttatccaaatgttggaaagagttcaacaatcaat 83400 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || |||||||||||||||||||| || || |||||||| || ||||||||| Sbjct: 83399 gctttagttggtgagaagaagactggtgttactcacacacctggcaaaacaaagcatttc 83340 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct: 83339 cagacgctgataatctcagaggagctcactctatgtgattgtcctggtctggtcttccct 83280 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || || |||||||| ||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 83279 tccttctcaagctcaaggcatgagatggtgtcatgtggtgtcttgccaatcgataggatg 83220 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgtgcccaagaaatatcctgga 441 || || ||| | | ||| ||||| ||||| ||| ||||||| |||||||| | |||| || Sbjct: 83219 actaagcaccgggaagctattcaggtggtggcagatcgtgt-cccaagaagtgtccttga 83161 Query: 442 acag 445 |||| Sbjct: 83160 acag 83157
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 250 bits (126), Expect = 3e-63 Identities = 242/281 (86%) Strand = Plus / Plus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| |||||||||||||||||||||||||||||||| ||||||||| | || ||| Sbjct: 46827 aagcatgtagttgttggatttgttggctatccaaatgttggaaagagttcatcaataaat 46886 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || || ||||||| ||| ||||| || || ||||||||||| || |||||| Sbjct: 46887 gctttggttggggagaagaggacaggtgttactcacacacctggcaagacaaaacatttc 46946 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||||||||||||||| |||||||||| || |||||||| || |||||||||||||| Sbjct: 46947 cagacactgataatctccgaagagctcactctttgtgattgccccggtctggtcttccca 47006 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatg 381 || ||| ||||||| ||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 47007 tcctttccaagctcaaggcatgagatggtggcatgtggtgtgttgccgattgatagaatg 47066 Query: 382 acaaancacagaggagcaattcaagtggtagcaaatcgtgt 422 ||||| ||| ||| ||| ||||||||||| ||| ||||||| Sbjct: 47067 acaaagcaccgagaagctattcaagtggtcgcagatcgtgt 47107
>gb|AF124739.1|AF124739 Zea mays clone CRCAY56 unknown mRNA Length = 1044 Score = 248 bits (125), Expect = 1e-62 Identities = 206/233 (88%) Strand = Plus / Minus Query: 142 aagcgtgtggttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaat 201 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 258 aagcatgtagttgttggatttgttggctatccaaatgttgggaagagttcaactataaat 199 Query: 202 gctcttgtcggtgagaagaagactggtgtaacatctacgcctggcaagaccaagcatttc 261 ||| | || || ||||||| ||||||||| || || ||||||||||| || |||||| Sbjct: 198 gctttggttggcgagaagaggactggtgttactcacacacctggcaagacaaaacatttc 139 Query: 262 cagacactgataatctcagaagagctcatgctgtgtgattgtcctggtctggtcttccct 321 ||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||| Sbjct: 138 cagacactgataatctctgaagagctcactctttgtgattgccctggtctggtcttccct 79 Query: 322 tctttttcaagctcgaggcatgagatggtggcgtgtggtgtcttgccaattga 374 || ||||||||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 78 tccttttcaagctcaaggcatgagatggtggcatgtggtgtgttgccgattga 26
>gb|AY109495.1| Zea mays CL1497_1 mRNA sequence Length = 1712 Score = 117 bits (59), Expect = 3e-23 Identities = 116/135 (85%) Strand = Plus / Minus Query: 168 ctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggtgagaagaagactgg 227 ||||||||||||||||||||||||||| || |||||| | || || ||||||| |||||| Sbjct: 1214 ctatccaaatgttgggaagagttcaactataaatgctttggttggcgagaagaggactgg 1155 Query: 228 tgtaacatctacgcctggcaagaccaagcatttccagacactgataatctcagaagagct 287 ||| || || ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1154 tgttactcacacacctggcaagacaaaacatttccagacactgataatctctgaagagct 1095 Query: 288 catgctgtgtgattg 302 || || |||||||| Sbjct: 1094 cactctttgtgattg 1080 Score = 87.7 bits (44), Expect = 3e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 332 gctcgaggcatgagatggtggcgtgtggtgtcttgccaattgatagaatgacaaancaca 391 |||| ||||||||||||||||| |||||||| ||||| |||||||| |||||||| ||| Sbjct: 1050 gctcaaggcatgagatggtggcatgtggtgtgttgccgattgataggatgacaaagcacc 991 Query: 392 gaggagcaattcaagtggtagcaaatcgtgt 422 | | ||| ||||||||||| ||| ||||||| Sbjct: 990 gggaagctattcaagtggtggcagatcgtgt 960
>ref|NM_128278.1| Arabidopsis thaliana GTP binding AT2G27200 mRNA, complete cds Length = 1726 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 ||||| |||||||| || || ||||| ||||||||||| || ||||| || | || ||| Sbjct: 919 gttggctttgttgggtacccgaatgtggggaagagttcgacaatcaacgcattggtaggt 978 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| |||||||| |||||||| || || || || ||||||||||||||| ||||| Sbjct: 979 cagaagcgaactggtgtcacatctacccccgggaaaacaaagcatttccagacattgata 1038 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 ||||| || || || ||||| || ||||| |||||| | ||||||||||| || |||||| Sbjct: 1039 atctctgaggatctaatgctctgcgattgccctggtttagtcttcccttcattctcaagc 1098 Query: 334 tc 335 || Sbjct: 1099 tc 1100
>ref|NM_100714.2| Arabidopsis thaliana GTP binding AT1G08410 mRNA, complete cds Length = 2161 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 |||||||||||||| || ||||||||||| |||||||| || |||||||| | || ||| Sbjct: 1049 gttggatttgttgggtacccaaatgttggaaagagttctacaatcaatgcattggtgggt 1108 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| || ||||| || ||||| || || || || |||||||||||||| |||| Sbjct: 1109 cagaagcgaacaggtgtcacctctaccccaggaaaaacaaagcatttccagactttgatc 1168 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 ||||| || ||||| ||||| || ||||| |||||| | ||||||||||| || |||||| Sbjct: 1169 atctctgatgagcttatgctatgcgattgccctggtttagtcttcccttcgttctcaagc 1228 Query: 334 tc 335 || Sbjct: 1229 tc 1230
>gb|AC007290.6| Arabidopsis thaliana chromosome 2 clone T22O13 map B68, complete sequence Length = 30219 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 ||||| |||||||| || || ||||| ||||||||||| || ||||| || | || ||| Sbjct: 14001 gttggctttgttgggtacccgaatgtggggaagagttcgacaatcaacgcattggtaggt 13942 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| |||||||| |||||||| || || || || ||||||||||||||| ||||| Sbjct: 13941 cagaagcgaactggtgtcacatctacccccgggaaaacaaagcatttccagacattgata 13882 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 ||||| || || || ||||| || ||||| |||||| | ||||||||||| || |||||| Sbjct: 13881 atctctgaggatctaatgctctgcgattgccctggtttagtcttcccttcattctcaagc 13822 Query: 334 tc 335 || Sbjct: 13821 tc 13820
>gb|BT023444.1| Arabidopsis thaliana At1g08410 gene, complete cds Length = 1904 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 |||||||||||||| || ||||||||||| |||||||| || |||||||| | || ||| Sbjct: 946 gttggatttgttgggtacccaaatgttggaaagagttctacaatcaatgcattggtgggt 1005 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| || ||||| || ||||| || || || || |||||||||||||| |||| Sbjct: 1006 cagaagcgaacaggtgtcacctctaccccaggaaaaacaaagcatttccagactttgatc 1065 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 ||||| || ||||| ||||| || ||||| |||||| | ||||||||||| || |||||| Sbjct: 1066 atctctgatgagcttatgctatgcgattgccctggtttagtcttcccttcgttctcaagc 1125 Query: 334 tc 335 || Sbjct: 1126 tc 1127
>gb|BT022030.1| Arabidopsis thaliana At2g27200 gene, complete cds Length = 1878 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 ||||| |||||||| || || ||||| ||||||||||| || ||||| || | || ||| Sbjct: 953 gttggctttgttgggtacccgaatgtggggaagagttcgacaatcaacgcattggtaggt 1012 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| |||||||| |||||||| || || || || ||||||||||||||| ||||| Sbjct: 1013 cagaagcgaactggtgtcacatctacccccgggaaaacaaagcatttccagacattgata 1072 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 ||||| || || || ||||| || ||||| |||||| | ||||||||||| || |||||| Sbjct: 1073 atctctgaggatctaatgctctgcgattgccctggtttagtcttcccttcattctcaagc 1132 Query: 334 tc 335 || Sbjct: 1133 tc 1134
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 |||||||||||||| || ||||||||||| |||||||| || |||||||| | || ||| Sbjct: 29101 gttggatttgttgggtacccaaatgttggaaagagttctacaatcaatgcattggtgggt 29160 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| || ||||| || ||||| || || || || |||||||||||||| |||| Sbjct: 29161 cagaagcgaacaggtgtcacctctaccccaggaaaaacaaagcatttccagactttgatc 29220 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 ||||| || ||||| ||||| || ||||| |||||| | ||||||||||| || |||||| Sbjct: 29221 atctctgatgagcttatgctatgcgattgccctggtttagtcttcccttcgttctcaagc 29280 Query: 334 tc 335 || Sbjct: 29281 tc 29282
>ref|XM_949009.1| Theileria annulata strain Ankara GTPase (TA02800) partial mRNA Length = 2730 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttca 192 |||||||||||||| |||||||||||||| || |||||| Sbjct: 1720 gttggatttgttggatatccaaatgttggtaaaagttca 1758
>gb|AC140030.6| Medicago truncatula clone mth2-7g24, complete sequence Length = 122057 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 153 tgttggatttgttggctatccaaatgttgggaag 186 |||||| |||||||| |||||||||||||||||| Sbjct: 118097 tgttggttttgttggatatccaaatgttgggaag 118130
>emb|BX821027.1|CNS0A8N7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH92ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1850 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgctcttgtcggt 213 ||||| |||||||| || || ||||| ||||||||||| || ||||| || | || ||| Sbjct: 1046 gttggctttgttgggtacccgaatgtggggaagagttcgacaatcaacgcattggtaggt 1105 Query: 214 gagaagaagactggtgtaacatctacgcctggcaagaccaagcatttccagacactgata 273 ||||| |||| ||| |||||||| || || || | ||||||||||||||| | ||| Sbjct: 1106 cagaagcgaactgttgtcacatctacccccgggaaaaaaaagcatttccagacattcata 1165 Query: 274 atctcagaagagctcatgctgtgtgattgtcctggtctggtcttcccttctttttcaagc 333 |||| || || || ||| | || ||||| |||||| | ||||||||||| || |||||| Sbjct: 1166 atctttgaggatctaatgttctgcgattgccctggtttagtcttcccttcattctcaagc 1225 Query: 334 tc 335 || Sbjct: 1226 tc 1227
>dbj|AP004498.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT06A20, TM0030, complete sequence Length = 82599 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 153 tgttggatttgttggctatccaaatgttgggaag 186 |||||||||| |||| |||||||||||||||||| Sbjct: 66510 tgttggatttattggatatccaaatgttgggaag 66477
>ref|XM_751623.1| Ustilago maydis 521 hypothetical protein (UM00569.1) partial mRNA Length = 2457 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 238 acgcctggcaagaccaagcatttccagac 266 ||||| ||||||||||||||||||||||| Sbjct: 1597 acgccaggcaagaccaagcatttccagac 1625
>gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete sequence Length = 115804 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 151 gttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgc 203 ||||| ||||||||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 32465 gttgtgggatttgttggatatcctaatgtaggaaaaagttcaactatcaatgc 32413
>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence Length = 147062 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 151 gttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgc 203 ||||| ||||||||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 114598 gttgtgggatttgttggatatcctaatgtaggaaaaagttcaactatcaatgc 114650
>gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete sequence Length = 117901 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 151 gttgttggatttgttggctatccaaatgttgggaagagttcaaccatcaatgc 203 ||||| ||||||||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 40204 gttgtgggatttgttggatatcctaatgtaggaaaaagttcaactatcaatgc 40256
>ref|NM_186171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2031 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 tggctatccaaatgttgggaagag 188 |||||||||||||||||||||||| Sbjct: 522 tggctatccaaatgttgggaagag 545
>ref|XM_581313.2| PREDICTED: Bos taurus similar to CG14788-PA (LOC505082), mRNA Length = 2664 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 153 tgttggatttgttggctatccaaatgttgggaagagttcaaccatcaa 200 ||||||| | || ||||||||||| ||||| ||||||||||| ||||| Sbjct: 1572 tgttggactggtgggctatccaaacgttggtaagagttcaacaatcaa 1619
>ref|XM_502114.1| Yarrowia lipolytica CLIB122, YALI0C21956g predicted mRNA Length = 2127 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 289 atgctgtgtgattgtcctggtctggtcttccc 320 ||||||||||||||||| |||||||| ||||| Sbjct: 1357 atgctgtgtgattgtcccggtctggtgttccc 1388
>gb|BC110150.1| Bos taurus cDNA clone MGC:133940 IMAGE:8055846, complete cds Length = 2348 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 153 tgttggatttgttggctatccaaatgttgggaagagttcaaccatcaa 200 ||||||| | || ||||||||||| ||||| ||||||||||| ||||| Sbjct: 1199 tgttggactggtgggctatccaaacgttggtaagagttcaacaatcaa 1246
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 tggctatccaaatgttgggaagag 188 |||||||||||||||||||||||| Sbjct: 560338 tggctatccaaatgttgggaagag 560315
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 tggctatccaaatgttgggaagag 188 |||||||||||||||||||||||| Sbjct: 4883683 tggctatccaaatgttgggaagag 4883660
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 tggctatccaaatgttgggaagag 188 |||||||||||||||||||||||| Sbjct: 71166 tggctatccaaatgttgggaagag 71143
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 tggctatccaaatgttgggaagag 188 |||||||||||||||||||||||| Sbjct: 114250 tggctatccaaatgttgggaagag 114227
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 289 atgctgtgtgattgtcctggtctggtcttccc 320 ||||||||||||||||| |||||||| ||||| Sbjct: 2936468 atgctgtgtgattgtcccggtctggtgttccc 2936437
>ref|XM_323505.1| Neurospora crassa OR74A hypothetical protein ( (AL513445) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU04166.1) partial mRNA Length = 1962 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 244 ggcaagaccaagcatttccagac 266 ||||||||||||||||||||||| Sbjct: 1108 ggcaagaccaagcatttccagac 1130
>ref|XM_955631.1| Neurospora crassa OR74A hypothetical protein ( (AL513445) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU04166.1) partial mRNA Length = 1962 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 244 ggcaagaccaagcatttccagac 266 ||||||||||||||||||||||| Sbjct: 1108 ggcaagaccaagcatttccagac 1130
>ref|XM_815830.1| Trypanosoma cruzi strain CL Brener GTPase protein (Tc00.1047053504153.300) partial mRNA Length = 1524 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagagttcaaccatcaatgctct 206 ||||||| |||||||| ||||||||||| | ||||||||||| Sbjct: 791 ttggctacccaaatgtggggaagagttccattatcaatgctct 833
>emb|AL513445.1|NCB7A16 Neurospora crassa DNA linkage group V BAC clone B7A16 Length = 74014 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 244 ggcaagaccaagcatttccagac 266 ||||||||||||||||||||||| Sbjct: 47200 ggcaagaccaagcatttccagac 47178
>gb|BC066695.1| Danio rerio zgc:76988, mRNA (cDNA clone MGC:76988 IMAGE:6525951), complete cds Length = 2420 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaa 200 |||||| | ||||| ||||||||||||||||| || || |||||||| Sbjct: 1195 gttggactggttggttatccaaatgttgggaaaagctctaccatcaa 1241 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtc 315 ||||||||||||||||| |||||| Sbjct: 1333 ctgtgtgattgtcctggactggtc 1356
>ref|NM_212642.1| Danio rerio zgc:76988 (zgc:76988), mRNA Length = 2420 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 154 gttggatttgttggctatccaaatgttgggaagagttcaaccatcaa 200 |||||| | ||||| ||||||||||||||||| || || |||||||| Sbjct: 1195 gttggactggttggttatccaaatgttgggaaaagctctaccatcaa 1241 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtc 315 ||||||||||||||||| |||||| Sbjct: 1333 ctgtgtgattgtcctggactggtc 1356
>emb|AJ719566.1| Gallus gallus mRNA for hypothetical protein, clone 3g12 Length = 1983 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 tggctatccaaatgttgggaag 186 |||||||||||||||||||||| Sbjct: 556 tggctatccaaatgttgggaag 577
>ref|NM_001006354.1| Gallus gallus GTP binding protein 4 (GTPBP4), mRNA Length = 1983 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 tggctatccaaatgttgggaag 186 |||||||||||||||||||||| Sbjct: 556 tggctatccaaatgttgggaag 577
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 287 tcatgctgtgtgattgtcctggtctggtcttccc 320 ||||||| ||||||||||| |||||||| ||||| Sbjct: 1584221 tcatgctctgtgattgtcccggtctggtgttccc 1584254
>emb|BX934062.2| Gallus gallus finished cDNA, clone ChEST58n24 Length = 1948 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 tggctatccaaatgttgggaag 186 |||||||||||||||||||||| Sbjct: 537 tggctatccaaatgttgggaag 558
>emb|BX933999.1| Gallus gallus finished cDNA, clone ChEST57c17 Length = 1948 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 tggctatccaaatgttgggaag 186 |||||||||||||||||||||| Sbjct: 537 tggctatccaaatgttgggaag 558
>emb|BX929452.1| Gallus gallus finished cDNA, clone ChEST985g10 Length = 1947 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 tggctatccaaatgttgggaag 186 |||||||||||||||||||||| Sbjct: 542 tggctatccaaatgttgggaag 563
>ref|NM_104176.2| Arabidopsis thaliana GTP binding AT1G52980 mRNA, complete cds Length = 1878 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggatttgttggctatccaaatgttgggaa 185 ||||||||||| ||||| ||||||||||| Sbjct: 937 ggatttgttgggtatccgaatgttgggaa 965
>ref|XM_524667.1| PREDICTED: Pan troglodytes guanine nucleotide binding protein-like 2 (nucleolar) (LOC469282), mRNA Length = 2385 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 1136 ttggctatccaaatgttggcaagag 1160
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttccc 320 |||||||||||||| ||||| |||||||| Sbjct: 405110 ctgtgtgattgtcccggtcttgtcttccc 405138
>gb|BT012928.1| Lycopersicon esculentum clone 114091F, mRNA sequence Length = 2544 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 169 tatccaaatgttgggaagagttcaaccatcaat 201 |||||||||||||| ||||||||| ||||||| Sbjct: 615 tatccaaatgttggcaagagttcattcatcaat 647
>ref|NM_013285.1| Homo sapiens guanine nucleotide binding protein-like 2 (nucleolar) (GNL2), mRNA Length = 2331 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 1026 ttggctatccaaatgttggcaagag 1050
>ref|XM_387370.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07194.1) partial mRNA Length = 2001 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttccc 320 |||||||||||||| ||||| |||||||| Sbjct: 1171 ctgtgtgattgtcccggtctcgtcttccc 1199
>ref|XM_569478.1| Cryptococcus neoformans var. neoformans JEC21 GTP-binding protein (CNC01470) partial mRNA Length = 2259 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttccc 320 |||||||||||||| ||||| |||||||| Sbjct: 1372 ctgtgtgattgtcccggtcttgtcttccc 1400
>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence Length = 207817 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 tgcccaagaaatatcctggaa 442 ||||||||||||||||||||| Sbjct: 127689 tgcccaagaaatatcctggaa 127669
>emb|AL034379.8|HS423B22 Human DNA sequence from clone RP3-423B22 on chromosome 1p33-35.3 Contains the 3' end of the gene for a novel protein (FLJ23231), the gene for a novel protein (FLJ11730), the gene for Smad nuclear interacting protein (SNIP1) (FLJ14716, FLJ12553), a ferritin heavy polypeptide 1 (FTH1) pseudogene, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene, the DNALI1 gene for dynein axonemal light intermediate polypeptide 1 and the 3' end of the 3' end of the gene for nucleolar GTPase (HUMAUANTIG), complete sequence Length = 112224 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 99963 ttggctatccaaatgttggcaagag 99939
>emb|AL929108.5| Zebrafish DNA sequence from clone CH211-239J9 in linkage group 6 Contains the 3' part of a novel gene similar to human and mouse SPAG1 (sperm associated antigen 1), a novel gene similar to human and mouse COX6C (cytochrome c oxidase, subunit VIc), a novel gene, a novel gene similar to mouse and human MBC2 (membrane bound C2 domain containing protein), a novel gene similar to vertebrate ITGB4BP (integrin beta 4 binding protein), the 3' part of novel gene similar to vertebrate MMP24 (membrane-inserted matrix metalloproteinase 24) and two predicted CpG islands, complete sequence Length = 161277 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 agctcatgctgtgtgattgtc 304 ||||||||||||||||||||| Sbjct: 109267 agctcatgctgtgtgattgtc 109287
>gb|BC000107.2| Homo sapiens guanine nucleotide binding protein-like 2 (nucleolar), mRNA (cDNA clone MGC:1085 IMAGE:3506131), complete cds Length = 2352 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 1046 ttggctatccaaatgttggcaagag 1070
>emb|CR857435.1| Pongo pygmaeus mRNA; cDNA DKFZp469D2124 (from clone DKFZp469D2124) Length = 2350 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 1061 ttggctatccaaatgttggcaagag 1085
>gb|AC019018.9|AC019018 Arabidopsis thaliana chromosome 1 BAC F14G24 genomic sequence, complete sequence Length = 126253 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggatttgttggctatccaaatgttgggaa 185 ||||||||||| ||||| ||||||||||| Sbjct: 108053 ggatttgttgggtatccgaatgttgggaa 108081
>gb|AC022520.2|AC022520 Arabidopsis thaliana chromosome I BAC F8L10 genomic sequence, complete sequence Length = 110611 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 157 ggatttgttggctatccaaatgttgggaa 185 ||||||||||| ||||| ||||||||||| Sbjct: 86951 ggatttgttgggtatccgaatgttgggaa 86923
>gb|L05425.1|HUMAUANTIG Homo sapiens nucleolar GTPase mRNA, complete cds Length = 2331 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 1026 ttggctatccaaatgttggcaagag 1050
>gb|BC009250.2| Homo sapiens guanine nucleotide binding protein-like 2 (nucleolar), mRNA (cDNA clone MGC:4453 IMAGE:2960125), complete cds Length = 2347 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagag 188 ||||||||||||||||||| ||||| Sbjct: 1046 ttggctatccaaatgttggcaagag 1070
>ref|XM_641557.1| Dictyostelium discoideum bromodomain-containing protein (DDB0220695), partial mRNA Length = 9744 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tgtggttgttggatttgttg 166 |||||||||||||||||||| Sbjct: 3014 tgtggttgttggatttgttg 2995
>ref|XM_641540.1| Dictyostelium discoideum putative GATA-binding transcription factor (DDB0220467), partial mRNA Length = 3021 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tgtggttgttggatttgttg 166 |||||||||||||||||||| Sbjct: 962 tgtggttgttggatttgttg 943
>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome Length = 1545895 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 161 ttgttggctatccaaatgttgggaagag 188 |||||||||||||||| ||||| ||||| Sbjct: 266061 ttgttggctatccaaacgttggaaagag 266088
>gb|AC132236.3| Mus musculus BAC clone RP24-500O16 from chromosome 5, complete sequence Length = 157311 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 aagaaatatcctggaacagg 446 |||||||||||||||||||| Sbjct: 26986 aagaaatatcctggaacagg 27005
>ref|XM_809479.1| Trypanosoma cruzi strain CL Brener GTPase (Tc00.1047053510609.30) partial mRNA Length = 1809 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 164 ttggctatccaaatgttgggaagagttc 191 ||||||||||||| ||||| |||||||| Sbjct: 971 ttggctatccaaacgttggtaagagttc 998
>ref|XM_789562.1| PREDICTED: Strongylocentrotus purpuratus similar to CG14788-PA (LOC589934), mRNA Length = 2091 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 175 aatgttgggaagagttcaaccatcaatgctct 206 ||||| || |||||||| |||||||||||||| Sbjct: 1288 aatgtaggtaagagttctaccatcaatgctct 1319
>ref|XM_782619.1| PREDICTED: Strongylocentrotus purpuratus similar to mucin 17 (LOC582675), mRNA Length = 15780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggtgtaacatctacgcct 243 |||||||||||||||||||| Sbjct: 5705 ctggtgtaacatctacgcct 5724
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gtcttcccttctttttcaag 332 |||||||||||||||||||| Sbjct: 56928 gtcttcccttctttttcaag 56947
>ref|XM_691838.1| PREDICTED: Danio rerio similar to guanine nucleotide binding protein-like 1 (LOC568505), mRNA Length = 2034 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttcccttc 323 |||||||||||||| || || ||||||||||| Sbjct: 1243 ctgtgtgattgtcccgggcttgtcttcccttc 1274
>ref|XM_691633.1| PREDICTED: Danio rerio similar to guanine nucleotide binding protein-like 1 (LOC568311), mRNA Length = 1620 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttcccttc 323 |||||||||||||| || || ||||||||||| Sbjct: 1261 ctgtgtgattgtcccgggcttgtcttcccttc 1292
>dbj|AB168440.1| Macaca fascicularis testis cDNA clone: QtsA-12215, similar to human hypothetical protein FLJ11301 (FLJ11301), mRNA, RefSeq: NM_018385.1 Length = 1990 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 166 ggctatccaaatgttgggaagagttcaaccatcaat 201 ||||| || |||||||| ||||||||||| |||||| Sbjct: 1195 ggctaccctaatgttggtaagagttcaacaatcaat 1230
>gb|AC012169.8|AC012169 Homo sapiens chromosome 15 clone RP11-522G20 map 15q21.2, complete sequence Length = 180722 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cctggtctggtcttcccttc 323 |||||||||||||||||||| Sbjct: 170763 cctggtctggtcttcccttc 170782
>emb|BX323547.4| Zebrafish DNA sequence from clone CH211-266N13 in linkage group 16, complete sequence Length = 96492 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttcccttc 323 |||||||||||||| || || ||||||||||| Sbjct: 209 ctgtgtgattgtcccgggcttgtcttcccttc 240
>gb|AY957953.1| Homo sapiens cytochrome P450, family 19, subfamily A, polypeptide 1 (CYP19A1) gene, complete cds Length = 133132 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cctggtctggtcttcccttc 323 |||||||||||||||||||| Sbjct: 73793 cctggtctggtcttcccttc 73774
>dbj|AK064308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B10, full insert sequence Length = 1485 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 16 atatatggccgggaagagctcctggtga 43 |||||||||||||| || |||||||||| Sbjct: 866 atatatggccgggatgaactcctggtga 893
>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16, complete sequence Length = 199070 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 292 ctgtgtgattgtcctggtctggtcttcccttc 323 |||||||||||||| || || ||||||||||| Sbjct: 197279 ctgtgtgattgtcccgggcttgtcttcccttc 197310
>emb|AL732420.13| Mouse DNA sequence from clone RP23-84O5 on chromosome X, complete sequence Length = 191312 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ttccagacactgataatctc 278 |||||||||||||||||||| Sbjct: 129396 ttccagacactgataatctc 129415
>dbj|AP006737.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20F11, TM1687, complete sequence Length = 91649 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cagaggagcaattcaagtgg 409 |||||||||||||||||||| Sbjct: 3171 cagaggagcaattcaagtgg 3190
>dbj|AP006736.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45I15, TM1494, complete sequence Length = 114162 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cagaggagcaattcaagtgg 409 |||||||||||||||||||| Sbjct: 68173 cagaggagcaattcaagtgg 68192
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cttcccttctttttcaagct 334 |||||||||||||||||||| Sbjct: 4643 cttcccttctttttcaagct 4662
>emb|AL806535.7| Mouse DNA sequence from clone RP23-456J6 on chromosome 4, complete sequence Length = 181854 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cagaagagctcatgctgtgt 297 |||||||||||||||||||| Sbjct: 10344 cagaagagctcatgctgtgt 10363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,799,321 Number of Sequences: 3902068 Number of extensions: 3799321 Number of successful extensions: 65839 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 65550 Number of HSP's gapped (non-prelim): 273 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)