Clone Information

BLAST Search Result

Clone Name	bags37k19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulator...	298	7e-81
2	PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit...	195	1e-49
3	PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit...	195	1e-49
4	RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8	192	9e-49
5	RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8	191	2e-48
6	PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit...	191	2e-48
7	RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8	163	3e-40
8	RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8	163	4e-40
9	RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8	162	1e-39
10	IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 s...	87	3e-17
11	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	86	9e-17
12	IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 s...	84	3e-16
13	CSN6_XENLA (Q6NUC2) COP9 signalosome complex subunit 6 (Signalos...	63	6e-10
14	CSN6B_ARATH (Q8W1P0) COP9 signalosome complex subunit 6b (Signal...	63	8e-10
15	CSN6A_ARATH (Q8W206) COP9 signalosome complex subunit 6a (Signal...	62	1e-09
16	CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalos...	61	3e-09
17	CSN6_HUMAN (Q7L5N1) COP9 signalosome complex subunit 6 (Signalos...	60	5e-09
18	IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 s...	50	5e-06
19	IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 s...	50	7e-06
20	IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 s...	50	7e-06
21	IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 s...	50	7e-06
22	CSN6_DROME (Q9VCY3) COP9 signalosome complex subunit 6 (Signalos...	45	2e-04
23	CSN6_CAEEL (Q95PZ0) COP9 signalosome complex subunit 6 (Signalos...	45	2e-04
24	RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Pr...	41	0.003
25	PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit...	40	0.007
26	RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11	39	0.016
27	YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III	39	0.016
28	CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-...	38	0.021
29	CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	38	0.028
30	PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit...	35	0.14
31	PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit...	35	0.18
32	PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit...	35	0.18
33	PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit...	35	0.18
34	RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MP...	35	0.24
35	RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11	35	0.24
36	CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-...	35	0.24
37	CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-...	35	0.24
38	CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.31
39	CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.31
40	CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.40
41	CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	34	0.40
42	CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	32	1.5
43	EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyr...	32	1.5
44	EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor t...	32	1.5
45	CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	31	2.6
46	CCA2_THEAC (Q9V302) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21...	31	2.6
47	CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	31	2.6
48	CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4...	31	2.6
49	HPAB2_PSESM (Q8RSY1) Effector protein hopAB2 (Avirulence protein...	31	3.4
50	MUTS1_HALMA (Q5UZG9) DNA mismatch repair protein mutS 1	31	3.4
51	HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote...	30	4.5
52	REXO4_MOUSE (Q6PAQ4) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease...	30	7.6
53	EFNA1_HUMAN (P20827) Ephrin-A1 precursor (EPH-related receptor t...	30	7.6
54	CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	30	7.6
55	CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-...	30	7.6
56	CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4...	30	7.6
57	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	29	10.0
58	G3P_PSEAE (P27726) Glyceraldehyde-3-phosphate dehydrogenase (EC ...	29	10.0
59	AAA_STAS1 (Q49UX4) N-acetylmuramoyl-L-alanine amidase aaa precur...	29	10.0

>PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulatory subunit 7|
           (26S proteasome regulatory subunit rpn8) (MOV34 protein)
          Length = 308

 Score =  298 bits (764), Expect = 7e-81
 Identities = 144/160 (90%), Positives = 151/160 (94%)
 Frame = +2

Query: 149 MDVVKAAQLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNS 328
           MDV+K  Q+S RT+EKVVVHPLVLLSIVDHYNRVA+D+ KRVVGVLLG+SSRGVVDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60

Query: 329 YAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFT 508
           YAVPFEEDDKDP IWFLDHNYHESMF MFKRINAKEHVVGWYSTGPKL+ENDLDVHALF 
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFN 120

Query: 509 NYVPNPVLVIIDVQPKELGIPTKAYYVVEEVKENATQKSQ 628
            YVPNPVLVIIDVQPKELGIPTKAYY VEEVKENATQKSQ
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQ 160

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>PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40) (Mov34
           protein)
          Length = 321

 Score =  195 bits (495), Expect = 1e-49
 Identities = 89/148 (60%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
 Frame = +2

Query: 188 LEKVVVHPLVLLSIVDHYNRVAR-DTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 364
           ++KVVVHPLVLLS+VDH+NR+ +   +KRVVGVLLG+  + V+DV+NS+AVPF+EDDKD 
Sbjct: 6   VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65

Query: 365 RIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIID 544
            +WFLDH+Y E+M+ MFK++NA+E +VGWY TGPKL +ND+ ++ L   Y PN VLVIID
Sbjct: 66  SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIID 125

Query: 545 VQPKELGIPTKAYYVVEEVKENATQKSQ 628
           V+PK+LG+PT+AY  VEEV ++ T  S+
Sbjct: 126 VKPKDLGLPTEAYISVEEVHDDGTPTSK 153

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>PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40) (Mov34
           protein homolog)
          Length = 324

 Score =  195 bits (495), Expect = 1e-49
 Identities = 89/148 (60%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
 Frame = +2

Query: 188 LEKVVVHPLVLLSIVDHYNRVAR-DTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 364
           ++KVVVHPLVLLS+VDH+NR+ +   +KRVVGVLLG+  + V+DV+NS+AVPF+EDDKD 
Sbjct: 6   VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65

Query: 365 RIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIID 544
            +WFLDH+Y E+M+ MFK++NA+E +VGWY TGPKL +ND+ ++ L   Y PN VLVIID
Sbjct: 66  SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIID 125

Query: 545 VQPKELGIPTKAYYVVEEVKENATQKSQ 628
           V+PK+LG+PT+AY  VEEV ++ T  S+
Sbjct: 126 VKPKDLGLPTEAYISVEEVHDDGTPTSK 153

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>RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8|
          Length = 324

 Score =  192 bits (487), Expect = 9e-49
 Identities = 83/146 (56%), Positives = 120/146 (82%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 370
           ++V+VHPLVLLS VD YNR A+ T++RVVG+LLG ++  VV+V NSYA+PFEED+K+  +
Sbjct: 15  QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASV 74

Query: 371 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIIDVQ 550
           WFLDHN+ ESM  MFK+INA E +VGWY TGP+L+ +DL+++ L   Y+PNPVLVIIDV+
Sbjct: 75  WFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVK 134

Query: 551 PKELGIPTKAYYVVEEVKENATQKSQ 628
           PK +G+PT AY+ ++E++++ ++ S+
Sbjct: 135 PKSVGLPTNAYFAIDEIEDDGSKSSR 160

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>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8|
          Length = 352

 Score =  191 bits (485), Expect = 2e-48
 Identities = 89/146 (60%), Positives = 114/146 (78%), Gaps = 2/146 (1%)
 Frame = +2

Query: 197 VVVHPLVLLSIVDHYNRVA--RDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 370
           V V PLVLLS+VDHYNR    +   KRVVGVLLG +    V V+NS+AVPFEEDDKDP +
Sbjct: 16  VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSV 75

Query: 371 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIIDVQ 550
           WFLDHNY ESM  MFK++NA+E ++GWY +GPKL+ +DLD++ LF  Y PNP+LVI+DVQ
Sbjct: 76  WFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQ 135

Query: 551 PKELGIPTKAYYVVEEVKENATQKSQ 628
           PKE G+PT AY+ V+E+K++ T  S+
Sbjct: 136 PKETGVPTDAYFAVDEIKDDGTTTSK 161

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>PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40)
           (Proteasome subunit p39B) (Protein Mov34)
          Length = 337

 Score =  191 bits (484), Expect = 2e-48
 Identities = 89/150 (59%), Positives = 121/150 (80%), Gaps = 2/150 (1%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVAR-DTRKRVVGVLLGT-SSRGVVDVTNSYAVPFEEDDK 358
           ++ KV+VHPLVLLS+VDH+NR+ +   +KRVVGVLLG   S+GV+DV+NS+AVPF+EDDK
Sbjct: 6   SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDK 65

Query: 359 DPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVI 538
           D  +WFLDH+Y E+M+ MFK++NA+E VVGWY TGPKL +ND+ ++ L   Y PN VLVI
Sbjct: 66  DKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVI 125

Query: 539 IDVQPKELGIPTKAYYVVEEVKENATQKSQ 628
           ID +PK+LG+PT+AY  VEEV ++ +  S+
Sbjct: 126 IDAKPKDLGLPTEAYISVEEVHDDGSPTSK 155

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>RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8|
          Length = 326

 Score =  163 bits (413), Expect = 3e-40
 Identities = 76/143 (53%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 370
           E+V V PLVLLS++DHY R+     KR VGVLLG +S   + VTNS+A+PFEED+K+P +
Sbjct: 6   EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDV 65

Query: 371 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVP-NPVLVIIDV 547
           WFLDHNY E+M  M K+INAKE ++GWY +GPKL+ +DL ++ LF  Y   N +L+I+DV
Sbjct: 66  WFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDV 125

Query: 548 QPKELGIPTKAYYVVEEVKENAT 616
           + + +G+PT AY  +EEVK++ +
Sbjct: 126 KQQGVGLPTDAYMAIEEVKDDGS 148

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>RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8|
          Length = 329

 Score =  163 bits (412), Expect = 4e-40
 Identities = 75/143 (52%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 370
           + V + PLVLLS++DHY R      KR VGV+LG S    + VTNS+A+PFEED+K+  +
Sbjct: 6   DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDV 65

Query: 371 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVP-NPVLVIIDV 547
           WFLDHNY ESM  M K+INAKE ++GWY +GPKL+ +DL ++ LF  Y   NP+L+I+DV
Sbjct: 66  WFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQGNPLLLIVDV 125

Query: 548 QPKELGIPTKAYYVVEEVKENAT 616
           + +++G+PT AY  VE+VK++ T
Sbjct: 126 KQQDVGLPTDAYMAVEQVKDDGT 148

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>RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8|
          Length = 337

 Score =  162 bits (409), Expect = 1e-39
 Identities = 74/143 (51%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 370
           EKV + PLVLLS +DHY R      KR VGV+LG ++   + VTNS+A+PFEED+K+  +
Sbjct: 5   EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDV 64

Query: 371 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVP-NPVLVIIDV 547
           WFLDHNY E+M  M K+INAKE ++GWY +GPKL+ +DL ++ LF  Y   NP+L+I+DV
Sbjct: 65  WFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDV 124

Query: 548 QPKELGIPTKAYYVVEEVKENAT 616
           + + +G+PT AY  +E+VK++ T
Sbjct: 125 KQQGVGLPTDAYVAIEQVKDDGT 147

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>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 357

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 42/129 (32%), Positives = 76/129 (58%)
 Frame = +2

Query: 197 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 376
           V +HP++L SIVD Y R   +   RV+G LLGT  +  V+VTN ++VP  E + +  +  
Sbjct: 92  VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV-- 148

Query: 377 LDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIIDVQPK 556
            D  + ++M+ + K+++  E ++GWY+TG  + E+ + +H  ++   PNP+ + +D   +
Sbjct: 149 -DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQ 207

Query: 557 ELGIPTKAY 583
              +  KAY
Sbjct: 208 NGRMSIKAY 216

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>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 85.9 bits (211), Expect = 9e-17
 Identities = 42/129 (32%), Positives = 76/129 (58%)
 Frame = +2

Query: 197 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 376
           V +HP++L SIVD Y R   +   RV+G LLGT  +  V+VTN ++VP  E + +  +  
Sbjct: 96  VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV-- 152

Query: 377 LDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIIDVQPK 556
            D  + ++M+ + K+++  E ++GWY+TG  + E+ + +H  ++   PNP+ + +D   +
Sbjct: 153 -DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQ 211

Query: 557 ELGIPTKAY 583
              +  KAY
Sbjct: 212 HGRMSIKAY 220

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>IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f)
          Length = 293

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKDPRIWFL 379
           +HPLV+ ++ D + R   D+ +RV+G LLG+    G VD+ NSYAVP  E      +   
Sbjct: 30  IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV--- 85

Query: 380 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVLVIID 544
           D +YH +M +   ++N+KE +VGWYSTG  +      +H  +   VPNP+ + +D
Sbjct: 86  DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVD 140

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>CSN6_XENLA (Q6NUC2) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
          Length = 318

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
 Frame = +2

Query: 140 GEEMDVVKAAQLSGRTLE---KVVVHPLVLLSIVDHYNRVARDTRK--RVVGVLLGTSSR 304
           G E+DV     +  + +     V +HPLV+L+I DH+ R+     +  +V+G L+G    
Sbjct: 10  GMEVDVAALPSVMAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 69

Query: 305 GVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKEND 484
             ++V NS+ +  + +D+   I   +  Y+ +    FK++      +GWY+TG     +D
Sbjct: 70  RNIEVMNSFELLSQINDEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSD 126

Query: 485 LDVHALFTNYVPNPVLVIIDVQPKELGIPTKAY-YVVEEVKENAT 616
           + VH      + +P+ + ++   K   +P   Y  V++ V   AT
Sbjct: 127 IHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVYESVIDIVNGEAT 171

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>CSN6B_ARATH (Q8W1P0) COP9 signalosome complex subunit 6b (Signalosome subunit|
           6b) (AtCSN6b)
          Length = 317

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRK----------------------RVVGVLLGTSSRGVVD 316
           +HPLV+L+I DH+ RV                            RV G ++G      V+
Sbjct: 13  LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVE 72

Query: 317 VTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVH 496
           + NS+ + F     DP +  LD ++ E    ++K++    +V+GWYSTG    E+D+ +H
Sbjct: 73  IFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIH 127

Query: 497 ALFTNYVPNPVLVIID 544
               +   +PV V+++
Sbjct: 128 KALMDINESPVYVLLN 143

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>CSN6A_ARATH (Q8W206) COP9 signalosome complex subunit 6a (Signalosome subunit|
           6a) (AtCSN6a)
          Length = 317

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRK----------------------RVVGVLLGTSSRGVVD 316
           +HPLV+++I DHY RV                            RV G ++G      V+
Sbjct: 13  LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVE 72

Query: 317 VTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVH 496
           + NS+ + +     DP    LD ++ E    ++K++    +++GWYSTG   +E+D+ +H
Sbjct: 73  IFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIH 127

Query: 497 ALFTNYVPNPVLVIID 544
               +   +PV V+++
Sbjct: 128 KALMDINESPVYVLLN 143

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>CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
          Length = 324

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
 Frame = +2

Query: 140 GEEMDV-VKAAQLSGRTLE-KVVVHPLVLLSIVDHYNRVARDTRK--RVVGVLLGTSSRG 307
           G E+D  V +   SG T    V +HPLV+L+I DH+ R+     +  +V+G L+G     
Sbjct: 17  GMEVDAAVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGR 76

Query: 308 VVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDL 487
            ++V NS+ +     ++      +D  Y+ +    FK++  +   +GWY+TG     +D+
Sbjct: 77  NIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDI 133

Query: 488 DVHALFTNYVPNPVLVIIDVQPKELGIPTKAYYVVEEV 601
            VH      + +P+ + ++   K   +P   +  V ++
Sbjct: 134 HVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDI 171

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>CSN6_HUMAN (Q7L5N1) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
           (Vpr-interacting protein) (hVIP) (MOV34 homolog)
          Length = 327

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
 Frame = +2

Query: 140 GEEMD--VVKAAQLSGRTLE-KVVVHPLVLLSIVDHYNRVARDTRK--RVVGVLLGTSSR 304
           G E+D  VV +    G T    V +HPLV+L+I DH+ R+     +  +V+G L+G    
Sbjct: 19  GMEVDAAVVPSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEG 78

Query: 305 GVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKEND 484
             ++V NS+ +     ++      +D  Y+ +    FK++  +   +GWY+TG     +D
Sbjct: 79  RNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 135

Query: 485 LDVHALFTNYVPNPVLVIIDVQPKELGIPTKAYYVVEEV 601
           + VH      + +P+ + ++   K   +P   +  V ++
Sbjct: 136 IHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDI 174

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>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
          Length = 337

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
 Frame = +2

Query: 188 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 367
           L  V +  L +L I+ H    +      V G LLG     V++VTN +  P  +DD++  
Sbjct: 22  LRVVQIEGLAVLKIIKHCKEFSPTL---VTGQLLGLDVGSVLEVTNCFPFPVRDDDEE-- 76

Query: 368 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYVPN---PVLVI 538
           I     NY   M    + +N   + VGWY +        +++   F NY  N    V +I
Sbjct: 77  IEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCII 136

Query: 539 IDVQPKELGI 568
            D    +LG+
Sbjct: 137 YDPSKADLGV 146

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>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
 Frame = +2

Query: 188 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 364
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 365 RIWFLDHNYHESMFSMFKRINAKEHVVGWYST---GPKLKENDLDVHALFTNYVPNPVLV 535
              F +  Y   M    + +N     VGWY +   G  +    LD    + + +   V++
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVL 150

Query: 536 IID-VQPKELGIPTKAYYVVEEVKENATQK 622
           I D ++  +  +  KAY +  ++ E   +K
Sbjct: 151 IYDPIKTAQGSLSLKAYRLTPKLMEVCKEK 180

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>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
 Frame = +2

Query: 188 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 364
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 365 RIWFLDHNYHESMFSMFKRINAKEHVVGWYST---GPKLKENDLDVHALFTNYVPNPVLV 535
              F +  Y   M    + +N     VGWY +   G  +    LD    + + +   V++
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVL 150

Query: 536 IID-VQPKELGIPTKAYYVVEEVKENATQK 622
           I D ++  +  +  KAY +  ++ E   +K
Sbjct: 151 IYDPIKTAQGSLSLKAYRLTPKLMEVCKEK 180

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>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma)
          Length = 352

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
 Frame = +2

Query: 188 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 364
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 365 RIWFLDHNYHESMFSMFKRINAKEHVVGWYST---GPKLKENDLDVHALFTNYVPNPVLV 535
              F +  Y   M    + +N     VGWY +   G  +    LD    + + +   V++
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVL 150

Query: 536 IID-VQPKELGIPTKAYYVVEEVKENATQK 622
           I D ++  +  +  KAY +  ++ E   +K
Sbjct: 151 IYDPIKTAQGSLSLKAYRLTPKLMEVCKEK 180

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>CSN6_DROME (Q9VCY3) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (Dch6)
          Length = 341

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = +2

Query: 152 DVVKAAQLSGRTLEKVVVHPLVLLSIVDHYNR--VARDTRKRVVGVLLGTSSRGVVDVTN 325
           +++ AA  SG     + +HPLV+++I +H+ R        ++V G L+G      +++ N
Sbjct: 41  NIMAAAGTSGSVT--ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMN 98

Query: 326 SYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDV 493
           S+ +  +    +  I   + +Y+      +K++ +    +GWY+TG     +D+ +
Sbjct: 99  SFELKTDVIGDETVI---NKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKI 151

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>CSN6_CAEEL (Q95PZ0) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
          Length = 426

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
 Frame = +2

Query: 176 SGRTLEKVVVHPLVLLSIVDHYNRV---ARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFE 346
           SG    KV++HPLV++ + +HY+R       T K+V G +LG  +   V+  NS+ +  E
Sbjct: 7   SGSCSSKVLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVLKME 66

Query: 347 -EDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTG--PKLKENDLDVHALFTNYV 517
            E+  +P  +  +H    +    +  +  +  V+G Y  G    L   +  + +  TN V
Sbjct: 67  TEEMAEPVTFSTEHLLQRA--DQYLEVFPELQVIGLYCAGEDDNLTPEEKPLLSKLTNAV 124

Query: 518 PN 523
            N
Sbjct: 125 RN 126

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>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)|
          Length = 308

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKDPR 367
           E V +  L LL ++ H       T   V+G++LG       V V + +A+P  +      
Sbjct: 28  ECVYISSLALLKMLRHGRH---GTPMEVMGLMLGEFVDDFTVRVVDVFAMP--QSGTGVS 82

Query: 368 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLV 535
           +  +D  + ++M  M K+    E VVGWY + P     L   D++    F    P  V V
Sbjct: 83  VEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAV 142

Query: 536 IID 544
           ++D
Sbjct: 143 VVD 145

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>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 308

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 361
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 26  TSEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDEYTVRVVDVFAMP--QSGTG 80

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +DH +  +M  M K+    E VVGWY + P     L   D++    F       V
Sbjct: 81  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAV 140

Query: 530 LVIID 544
            V++D
Sbjct: 141 AVVVD 145

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>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11|
          Length = 311

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 361
           T E V +  L LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 28  TKETVYISSLALLKMLKHSRA---GVPMEVMGLMLGDFVDEYTVNVVDVFAMP--QSGTG 82

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    + VVGWY + P     L   D+D    F       V
Sbjct: 83  VSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAV 142

Query: 530 LVIID 544
            V++D
Sbjct: 143 AVVVD 147

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>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III|
          Length = 319

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 361
           T E V +  L LL ++ H           V+G++LG       ++VT+ +A+P  +    
Sbjct: 25  TSETVNISSLALLKMLRH---ARSGIPLEVMGLMLGDFVDDYTINVTDVFAMP--QSGTS 79

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  Y      + K +   E+VVGWY + P     L   D++    F    P  V
Sbjct: 80  VTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAV 139

Query: 530 LVIID 544
            V++D
Sbjct: 140 AVVVD 144

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>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (Dch5) (JAB1 homolog)
          Length = 327

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
 Frame = +2

Query: 197 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 376
           + +  L LL +V H           V+G++LG      + V +++A+P E  +       
Sbjct: 52  IKISALALLKMVMH---ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQA 108

Query: 377 LDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
             + Y  +     K +   EH VGWY + P     L   D+    L   Y    V +++D
Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVD 168

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>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 373

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = +2

Query: 272 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 451
           V+G+L+G +S  ++ V + Y++P +  +         + Y       F  +  ++ +VGW
Sbjct: 88  VMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESYEYMVQYLDAF--VTKEDKIVGW 145

Query: 452 YSTGPK----LKENDLDVHALFTNYVPNPVLVIIDVQPKE 559
           Y + P     L   D+   +L  NY  +P L I+ V PK+
Sbjct: 146 YHSHPGYGCWLSNIDIQTQSLNQNY-QDPYLAIV-VDPKK 183

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>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S proteasome
           regulatory complex subunit p37B) (Yippee-interacting
           protein 5)
          Length = 308

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 361
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 25  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVQVIDVFAMP--QTGTG 79

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    E VVGWY + P     L   D++    F       V
Sbjct: 80  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 139

Query: 530 LVIID 544
            V++D
Sbjct: 140 AVVVD 144

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>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 312

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 361
           T E V +  L LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 29  TSETVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVNVIDVFAMP--QSGTG 83

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    E VVGWY + P     L   D++    F       V
Sbjct: 84  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAV 143

Query: 530 LVIID 544
            V++D
Sbjct: 144 AVVVD 148

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>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (MAD1)
          Length = 310

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 361
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 27  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTG 81

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    E VVGWY + P     L   D++    F       V
Sbjct: 82  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 141

Query: 530 LVIID 544
            V++D
Sbjct: 142 AVVVD 146

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>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S
           proteasome-associated PAD1 homolog 1)
          Length = 310

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 361
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 27  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTG 81

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    E VVGWY + P     L   D++    F       V
Sbjct: 82  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 141

Query: 530 LVIID 544
            V++D
Sbjct: 142 AVVVD 146

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>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)|
          Length = 306

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 361
           T E V +  + LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 23  TKETVYISSIALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVNVVDVFAMP--QSGTG 77

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    + VVGWY + P     L   D++    F       V
Sbjct: 78  VSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAV 137

Query: 530 LVIID 544
            V++D
Sbjct: 138 AVVVD 142

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>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11|
          Length = 306

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
 Frame = +2

Query: 185 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 361
           T E V +  + LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 23  TKETVYISSIALLKMLKHGRA---GVPMEVMGLMLGEFVDEYTVNVVDVFAMP--QSGTG 77

Query: 362 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 529
             +  +D  +   M  M K+    + VVGWY + P     L   D++    F       V
Sbjct: 78  VSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAV 137

Query: 530 LVIID 544
            V++D
Sbjct: 138 AVVVD 142

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>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 332

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 382
           V  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 55  VSALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 111

Query: 383 HNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
           + Y  +     K++   E+ +GWY + P     L   D+    L   +    V V+ID
Sbjct: 112 YEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 169

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>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 382
           V  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 57  VSALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 113

Query: 383 HNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
           + Y  +     K++   E+ +GWY + P     L   D+    L   +    V V+ID
Sbjct: 114 YEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171

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>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1) (Kip1 C-terminus-interacting
           protein 2)
          Length = 333

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 382
           +  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 56  ISALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 112

Query: 383 HNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
           + Y  +     K++   E+ +GWY + P     L   D+    L   +    V V+ID
Sbjct: 113 YEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 170

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>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1)
          Length = 333

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +2

Query: 203 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 382
           +  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 56  ISALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 112

Query: 383 HNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
           + Y  +     K++   E+ +GWY + P     L   D+    L   +    V V+ID
Sbjct: 113 YEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 170

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>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
 Frame = +2

Query: 212 LVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNY 391
           L LL +V H           V+G++LG      + + +S+A+P E  +         + Y
Sbjct: 58  LALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEY 114

Query: 392 HESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
             +     K++   E+ +GWY + P     L   D+    L   +    V V+ID
Sbjct: 115 MAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 169

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>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 469

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
 Frame = +2

Query: 272 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 451
           V+G++ G   +  + V + Y +P E  +         + Y        K++   E++VGW
Sbjct: 85  VMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENLKQVGRDENIVGW 144

Query: 452 YSTGPK----LKENDLDVHALFTNYVPNPVLVIIDVQPKE 559
           Y + P     L   D+   +L  N+    + ++ID    E
Sbjct: 145 YHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKTE 184

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>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 299

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
 Frame = +2

Query: 197 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 376
           V +  + LL ++ H   V++     V+G + G      + + +S+A+P E  +       
Sbjct: 35  VKISAVALLKMLRH---VSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHE 91

Query: 377 LDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
               Y     ++ K +   E+V+GWY + P     L   D++       Y    V V++D
Sbjct: 92  EAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLD 151

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>EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 428 AKEHVVGWYSTGPKLKENDLDVHALFTNYV 517
           A  H+V W S+ PK +E D  VH    +Y+
Sbjct: 18  ADRHIVFWNSSNPKFREEDYTVHVQLNDYL 47

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>EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 428 AKEHVVGWYSTGPKLKENDLDVHALFTNYV 517
           A  H+V W S+ PK +E D  VH    +Y+
Sbjct: 18  ADRHIVFWNSSNPKFREEDYTVHVQLNDYL 47

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>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 340

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
 Frame = +2

Query: 272 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 451
           V+G++ G +      VT+++ +P E  +         + Y      + +    +E+VVGW
Sbjct: 74  VMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVGW 133

Query: 452 YSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
           Y + P     L   D+D  A+   +    + V+ID
Sbjct: 134 YHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVID 168

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>CCA2_THEAC (Q9V302) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA|
           nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
           transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT)
           (Fragment)
          Length = 222

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +2

Query: 338 PFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFTNYV 517
           P +E++   RI   D     +     +R+ A+  +VG Y+ G  L++ DLD+   F    
Sbjct: 13  PTQEEENRLRIISDDIIRKINSICRSRRLRAEAVIVGSYAKGTNLRDGDLDIFIAFDRDY 72

Query: 518 PNPVL 532
           P  ++
Sbjct: 73  PEEII 77

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>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 336

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
 Frame = +2

Query: 272 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 451
           V+G++ G      + +T++Y +P E  +         + Y      + +  N  E+V+GW
Sbjct: 66  VMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGW 125

Query: 452 YSTGPK----LKENDLDVHALFTNYVPNPVLVIID 544
           Y + P     L   D+   +L   +    V V+ID
Sbjct: 126 YHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVID 160

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>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)|
           (Signalosome subunit 5b) (Jun activation domain-binding
           homolog 1)
          Length = 357

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRK-RVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 367
           ++V +  L LL +V H    AR      ++G++ G +    + V +++A+P E  +    
Sbjct: 57  KRVHISALALLKMVVH----ARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVN 112

Query: 368 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLV 535
                + Y        K     E+VVGWY + P     L   D+    L   Y    + V
Sbjct: 113 AQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAV 172

Query: 536 IID 544
           +ID
Sbjct: 173 VID 175

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>HPAB2_PSESM (Q8RSY1) Effector protein hopAB2 (Avirulence protein avrPtoB)|
           [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)]
          Length = 553

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 363 GSLSSSSNGTA*ELVTSTTPREEVPRSTPTTRFRVSRATRL 241
           GS +SSSN    +   S TP    P   PT R R+SR+T L
Sbjct: 31  GSGASSSNSPQVQPRPSNTPPSNAPAPPPTGRERLSRSTAL 71

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>MUTS1_HALMA (Q5UZG9) DNA mismatch repair protein mutS 1|
          Length = 921

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
 Frame = +2

Query: 329 YAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAK--EHVVGWYSTGPKLKEND----LD 490
           Y  P E D+K+  +  L+   H+  +  F+R+ A+  EH       G  L E D    L 
Sbjct: 508 YTTP-ELDEKERDVLRLEERRHDMEYEHFQRLRARVAEHATLLQDVGRTLAELDAFASLA 566

Query: 491 VHALFTNYVPNPVLVIIDVQPKELGIPTKAYYVVEEVKE 607
           VHA+  ++    V     V   EL I    + VVE+  E
Sbjct: 567 VHAVENDWARPAV-----VDGNELSIEAGRHPVVEQTTE 600

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>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -2

Query: 360 SLSSSSNGTA*ELVTSTTPREEVPRSTPTT 271
           S SSSS+ T  +   STTP   VP +TP T
Sbjct: 213 SSSSSSSSTTPKTSASTTPESSVPATTPNT 242

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>REXO4_MOUSE (Q6PAQ4) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease XPMC2)|
           (Prevents mitotic catastrophe 2 protein homolog)
          Length = 432

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 140 GEEMDVVK---AAQLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRK 268
           GEE +VVK   A  L GR L    +H  + +  +DH  +  RDT+K
Sbjct: 314 GEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQK 359

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>EFNA1_HUMAN (P20827) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61) (Tumor necrosis factor, alpha-induced protein 4)
          Length = 205

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 428 AKEHVVGWYSTGPKLKENDLDVHALFTNYV 517
           A  H V W S+ PK +  D  +H    +YV
Sbjct: 18  ADRHTVFWNSSNPKFRNEDYTIHVQLNDYV 47

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>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 420

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
 Frame = +2

Query: 272 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 451
           V+G+LLG     ++ V +SY +P E    + R+     +Y  ++  +   +     +VGW
Sbjct: 95  VLGMLLGYVQDEMIVVVDSYRLPVE--GTETRVNAQMESYEYTVQYLETAVPEGLAIVGW 152

Query: 452 YSTGPK----LKENDLDVHALFTNYVPNPVLVIIDVQPK 556
           Y + P     L   D +   L  N+  +P L I+ V PK
Sbjct: 153 YHSHPGYGCWLSGIDAETQTLNQNF-QDPYLAIV-VDPK 189

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>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (JAB1 homolog)
          Length = 368

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 370
           +++ +  + LL +  H     R     ++G+L G        + + +A+P E  +     
Sbjct: 54  KQIKISAIALLKMTMH---AKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNA 110

Query: 371 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPVLVI 538
               + Y      M      KE VVGWY + P     L   D+    L   +    V ++
Sbjct: 111 QAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIV 170

Query: 539 ID 544
           ID
Sbjct: 171 ID 172

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>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)|
           (Signalosome subunit 5a) (Jun activation domain-binding
           homolog 2)
          Length = 358

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +2

Query: 191 EKVVVHPLVLLSIVDHYNRVARDTRK-RVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 367
           ++V +  L LL +V H    AR      ++G++ G +    + V +++A+P E  +    
Sbjct: 57  KRVKISALALLKMVVH----ARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVN 112

Query: 368 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 466
                + Y        K     E+VVGWY + P
Sbjct: 113 AQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHP 145

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +2

Query: 191 EKVVVHPLVL--LSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 364
           E +VV P V+  +  VDH      D  ++   V+ G +  G+     +Y V  E +D++ 
Sbjct: 522 EDLVVRPPVVTVMGHVDHGKTRLLDAIRKT-NVIAGEAG-GITQHIGAYQVATEVNDEER 579

Query: 365 RIWFLDHNYHESMFSMFKR 421
           +I F+D   HE+  +M  R
Sbjct: 580 KITFIDTPGHEAFTAMRAR 598

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>G3P_PSEAE (P27726) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH)
          Length = 334

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +2

Query: 170 QLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFE 346
           +L+G+     V  P++ +S+VD   +VARDT    V  LL  +S G  V   N+  +   
Sbjct: 224 ELAGKLTGLAVRVPVINVSLVDLTVQVARDTSVDEVNRLLREASEGSPVLGYNTQPLVSV 283

Query: 347 EDDKDPRIWFLDHNY 391
           + + DPR    D N+
Sbjct: 284 DFNHDPRSSIFDANH 298

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>AAA_STAS1 (Q49UX4) N-acetylmuramoyl-L-alanine amidase aaa precursor (EC|
           3.5.1.28)
          Length = 327

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +2

Query: 263 RKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHV 442
           RK+++  ++GTS+   V  TN+ A    +      +W + + Y+ S+  +    N   +V
Sbjct: 2   RKKIIATVIGTSALAAVTWTNADAATTYKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNV 61

Query: 443 V 445
           +
Sbjct: 62  I 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,138,125
Number of Sequences: 219361
Number of extensions: 1086044
Number of successful extensions: 3629
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 3529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3598
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result