Clone Information

BLAST Search Result

Clone Name	bags37k17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transpor...	205	1e-52
2	CHL1_ARATH (Q05085) Nitrate/chlorate transporter	169	7e-42
3	OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)	71	3e-12
4	S15A1_RABIT (P36836) Oligopeptide transporter, small intestine i...	69	1e-11
5	S15A2_RABIT (P46029) Oligopeptide transporter, kidney isoform (P...	67	5e-11
6	S15A1_CANFA (Q8WMX5) Oligopeptide transporter, small intestine i...	65	2e-10
7	S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Pep...	64	4e-10
8	S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (P...	64	4e-10
9	S15A2_MOUSE (Q9ES07) Oligopeptide transporter, kidney isoform (P...	64	5e-10
10	S15A1_RAT (P51574) Oligopeptide transporter, small intestine iso...	63	9e-10
11	S15A1_HUMAN (P46059) Oligopeptide transporter, small intestine i...	62	2e-09
12	S15A1_MOUSE (Q9JIP7) Oligopeptide transporter, small intestine i...	62	2e-09
13	OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide ...	60	6e-09
14	OPT2_CAEEL (Q21219) Oligopeptide transporter 2 (Di-/tri-peptide ...	57	6e-08
15	OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3	54	3e-07
16	PTR2_CANAL (P46030) Peptide transporter PTR2	46	1e-04
17	DTPT_LACLA (P36574) Di-/tripeptide transporter	46	1e-04
18	YBGH_ECOLI (P75742) Inner membrane transporter ybgH	44	3e-04
19	YCLF_BACSU (P94408) Hypothetical transporter yclF	44	4e-04
20	TPPB_ECOLI (P77304) Tripeptide permease tppB	40	0.008
21	TPPB_ECOL6 (Q8FH91) Tripeptide permease tppB	40	0.008
22	TPPB_ECO57 (Q8X651) Tripeptide permease tppB	40	0.008
23	TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB	39	0.011
24	TPPB_SALTI (Q8Z6Q5) Tripeptide permease tppB	39	0.011
25	DTPT_LACHE (O07380) Di-/tripeptide transporter	37	0.040
26	YJDL_ECOLI (P39276) Inner membrane transporter yjdL	35	0.20
27	EXUT_ECOLI (P0AA78) Hexuronate transporter	33	1.00
28	EXUT_ECO57 (P0AA79) Hexuronate transporter	33	1.00
29	ENB1_YEAST (Q08299) Siderophore iron transporter ENB1 (Sideropho...	32	1.7
30	ENK16_HUMAN (P61569) HERV-K_10p14 provirus ancestral Env polypro...	32	2.2
31	PCDB5_HUMAN (Q9Y5E4) Protocadherin beta 5 precursor (PCDH-beta5)	31	2.9
32	YHIP_ECOLI (P36837) Inner membrane transporter yhiP	31	3.8
33	TLC1_CHLMU (Q9PKX5) ADP,ATP carrier protein 1 (ADP/ATP transloca...	31	3.8
34	CAPS_DROME (Q9NHE5) Calcium-dependent secretion activator (dCAPS)	30	4.9
35	PCDB5_PANTR (Q5DRC9) Protocadherin beta 5 precursor (PCDH-beta5)	30	4.9
36	YCR3_ENTAG (Q01334) Hypothetical 29.9 kDa protein in crtE 3'regi...	30	4.9
37	PCDBG_HUMAN (Q9NRJ7) Protocadherin beta 16 precursor (PCDH-beta1...	30	4.9
38	MRAY_LACLA (Q9CH70) Phospho-N-acetylmuramoyl-pentapeptide-transf...	30	6.5
39	GLP2R_RAT (Q9Z0W0) Glucagon-like peptide 2 receptor precursor (G...	30	6.5
40	PRI2_DROME (Q9VPH2) DNA primase large subunit (EC 2.7.7.-)	30	6.5
41	CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel al...	30	6.5
42	TLC1_CHLTR (O84068) ADP,ATP carrier protein 1 (ADP/ATP transloca...	30	8.4
43	DPO3_STRP3 (Q8K5S8) DNA polymerase III polC-type (EC 2.7.7.7) (P...	30	8.4
44	PTR2_SCHPO (Q9P380) Probable peptide transporter ptr2 (Peptide p...	30	8.4
45	ASSY_RHILO (Q98E81) Argininosuccinate synthase (EC 6.3.4.5) (Cit...	30	8.4

>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)|
          Length = 585

 Score =  205 bits (521), Expect = 1e-52
 Identities = 95/218 (43%), Positives = 143/218 (65%)
 Frame = +2

Query: 8   PSCPGFQYFVLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAIN 187
           PS    QY + F  LYL+++GTGG+K  +   GADQ+DD++  +  +K +FF+WF+ +IN
Sbjct: 150 PSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSIN 209

Query: 188 LGVFISGTVVVWIQQNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAV 367
           +G  +S +++VWIQ+N  W LGFGI +V + +A  +F  GTP+YR Q P GSP+  +  V
Sbjct: 210 IGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQV 269

Query: 368 FVASFKKRKVEVPADSSILFDGNDADLTNEAPNKLAHTEGFRCLDKAAVVLGDQEIKESL 547
            VASF+K  V+VP D+++L++  D +       K+ HT+  + LDKAAV+  ++E K   
Sbjct: 270 VVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVI-SEEESKSGD 328

Query: 548 SGRPWMLCTVTQVEEVKILVRMLPIWFTSVFYAASMCQ 661
               W LCTVTQVEE+KIL+RM PIW + + ++A   Q
Sbjct: 329 YSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQ 366

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>CHL1_ARATH (Q05085) Nitrate/chlorate transporter|
          Length = 590

 Score =  169 bits (428), Expect = 7e-42
 Identities = 89/211 (42%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
 Frame = +2

Query: 20  GFQYFVLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVF 199
           G Q  VL+ +LYL ++GTGGVK+++   G+DQ+D++  ++  K   FF+ FF  IN+G  
Sbjct: 143 GIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSL 202

Query: 200 ISGTVVVWIQQNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFVAS 379
           ++ TV+V++Q +V    G+GI +  I++A   FLAGT  YR +   GSP+  + AV VA+
Sbjct: 203 LAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAA 262

Query: 380 FKKRKVEVPADSSILFDGND---ADLTNEAPNKLAHTEGFRCLDKAAVVLGDQEIKESLS 550
           ++ RK+E+PAD S L+D +D   A+ + +   KL HTE FR LDKAA+   +  +  ++ 
Sbjct: 263 WRNRKLELPADPSYLYDVDDIIAAEGSMKGKQKLPHTEQFRSLDKAAIRDQEAGVTSNVF 322

Query: 551 GRPWMLCTVTQVEEVKILVRMLPIWFTSVFY 643
            + W L T+T VEEVK +VRMLPIW T + +
Sbjct: 323 NK-WTLSTLTDVEEVKQIVRMLPIWATCILF 352

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>OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)|
          Length = 743

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTV 214
           V    L L++IGTGG+K  +   G DQ+  S   QS +   FFS F+ AIN G  IS T 
Sbjct: 133 VTVVGLLLIAIGTGGIKPCVSAFGGDQF--SLPAQSFQLAKFFSLFYFAINAGSLISTTF 190

Query: 215 VVWIQQNV-------AWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFV 373
              ++ +V        +SL FG+ ++ +I + + F+AG  +YR Q P G+ +  +     
Sbjct: 191 TPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIA 250

Query: 374 ASFK---KRKVEVPADS 415
            +FK   KR+   P +S
Sbjct: 251 DAFKGWQKRRHSEPMES 267

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>S15A1_RABIT (P36836) Oligopeptide transporter, small intestine isoform (Peptide|
           transporter 1) (Intestinal H(+)/peptide cotransporter)
           (Solute carrier family 15 member 1)
          Length = 707

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISG-- 208
           V    L L+++GTGG+K  +   G DQ+++    Q K++  FFS F++AIN G  +S   
Sbjct: 124 VCMIGLLLIALGTGGIKPCVSAFGGDQFEEG---QEKQRNRFFSIFYLAINAGSLLSTII 180

Query: 209 TVVVWIQQ------NVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVF 370
           T +V +QQ         + L FGI ++ + ++ + F+ G+ +Y+   P G+ L  +V   
Sbjct: 181 TPMVRVQQCGIHVKQACYPLAFGIPAILMAVSLIVFIIGSGMYKKFKPQGNILSKVVKCI 240

Query: 371 VASFKKR 391
             + K R
Sbjct: 241 CFAIKNR 247

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>S15A2_RABIT (P46029) Oligopeptide transporter, kidney isoform (Peptide|
           transporter 2) (Kidney H(+)/peptide cotransporter)
           (Solute carrier family 15 member 2)
          Length = 729

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQ 229
           L L+++GTGG+K  +   G DQ+++ + E+   +  +FS F++AIN G  IS  +   ++
Sbjct: 150 LCLIALGTGGIKPCVAAFGGDQFEEKHAEE---RTRYFSGFYLAINAGSLISTFITPMLR 206

Query: 230 QNV------AWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAV--FVAS-- 379
            +V       ++L FG+  + ++IA V F  G+ +Y+   P G+ +  +V    F  S  
Sbjct: 207 GDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKMYKKPPPEGNIVAQVVKCIWFAISNR 266

Query: 380 FKKRKVEVP 406
           FK R  ++P
Sbjct: 267 FKNRSEDIP 275

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>S15A1_CANFA (Q8WMX5) Oligopeptide transporter, small intestine isoform (Peptide|
           transporter 1) (Intestinal H(+)/peptide cotransporter)
           (Solute carrier family 15 member 1)
          Length = 708

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQ 229
           L L+++GTGG+K  +   G DQ+++    Q K++  FFS F++AIN G  IS  V   ++
Sbjct: 129 LALIALGTGGIKPCVSAFGGDQFEEG---QEKQRNRFFSIFYLAINAGSLISTIVTPMLR 185

Query: 230 --------QNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFVASFK 385
                   Q   + L FG+ +  + ++ + F+ G+ +Y+   P G+ +  +V     + K
Sbjct: 186 VHECGIYSQKACYPLAFGVPAALMAVSLIVFVIGSGMYKKFQPQGNVMGKVVKCIGFALK 245

Query: 386 KR 391
            R
Sbjct: 246 NR 247

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>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide|
           transporter 2) (Kidney H(+)/peptide cotransporter)
           (Solute carrier family 15 member 2)
          Length = 729

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQ 229
           L L+++GTGG+K  +   G DQ+++   E ++ +  +FS F++AIN G  IS  +   ++
Sbjct: 150 LSLIALGTGGIKPCVAAFGGDQFEE---EHAEARTRYFSVFYLAINAGSLISTFITPMLR 206

Query: 230 QNV------AWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGS----PLKSLVAVFVAS 379
            +V       ++L FG+  + +++A V F  G+ +YR   P G+     +K +       
Sbjct: 207 GDVKCFGQDCYALAFGVPGLLMVLALVVFAMGSKMYRKPPPEGNIVAQVIKCIWFALCNR 266

Query: 380 FKKRKVEVP 406
           F+ R  ++P
Sbjct: 267 FRNRSGDLP 275

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>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide|
           transporter 2) (Kidney H(+)/peptide cotransporter)
           (Solute carrier family 15 member 2)
          Length = 729

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQ 229
           L L+++GTGG+K  +   G DQ+++ + E+   +  +FS F+++IN G  IS  +   ++
Sbjct: 150 LSLIALGTGGIKPCVAAFGGDQFEEKHAEE---RTRYFSVFYLSINAGSLISTFITPMLR 206

Query: 230 QNV------AWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGS----PLKSLVAVFVAS 379
            +V       ++L FG+  + ++IA V F  G+ IY    P G+      K +       
Sbjct: 207 GDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNR 266

Query: 380 FKKRKVEVP 406
           FK R  ++P
Sbjct: 267 FKNRSGDIP 275

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>S15A2_MOUSE (Q9ES07) Oligopeptide transporter, kidney isoform (Peptide|
           transporter 2) (Kidney H(+)/peptide cotransporter)
           (Solute carrier family 15 member 2)
          Length = 729

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQ 229
           L L+++GTGG+K  +   G DQ+++   E ++ +  +FS F+++IN G  IS  +   ++
Sbjct: 150 LSLIALGTGGIKPCVAAFGGDQFEE---EHAEARTRYFSVFYLSINAGSLISTFITPMLR 206

Query: 230 QNV------AWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPL----KSLVAVFVAS 379
            +V       ++L FGI  + +++A V F  G+ +YR   P G+ +    K +       
Sbjct: 207 GDVKCFGEDCYALAFGIPGLLMVLALVVFAMGSKMYRKPPPEGNIVAQVTKCIWFAICNR 266

Query: 380 FKKRKVEVP 406
           F+ R  ++P
Sbjct: 267 FRNRSEDIP 275

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>S15A1_RAT (P51574) Oligopeptide transporter, small intestine isoform (Peptide|
           transporter 1) (Intestinal H(+)/peptide cotransporter)
           (Solute carrier family 15 member 1) (Proton-coupled
           dipeptide cotransporter)
          Length = 710

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISG--TVVVW 223
           L L+++GTGG+K  +   G DQ+++    Q K++  FFS F++AIN G  +S   T ++ 
Sbjct: 129 LALIALGTGGIKPCVSAFGGDQFEEG---QEKQRNRFFSIFYLAINAGSLLSTIITPILR 185

Query: 224 IQ------QNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFVASFK 385
           +Q      Q   + L FG+ +  + +A + F+ G+ +Y+   P G+ +  +      + K
Sbjct: 186 VQQCGIHSQQACYPLAFGVPAALMAVALIVFVLGSGMYKKFQPQGNIMGKVAKCIRFAIK 245

Query: 386 KR 391
            R
Sbjct: 246 NR 247

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>S15A1_HUMAN (P46059) Oligopeptide transporter, small intestine isoform (Peptide|
           transporter 1) (Intestinal H(+)/peptide cotransporter)
           (Solute carrier family 15 member 1)
          Length = 708

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISG--TVVVW 223
           L L+++GTGG+K  +   G DQ+++    Q K++  FFS F++AIN G  +S   T ++ 
Sbjct: 129 LALIALGTGGIKPCVSAFGGDQFEEG---QEKQRNRFFSIFYLAINAGSLLSTIITPMLR 185

Query: 224 IQQ------NVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFVASFK 385
           +QQ         + L FG+ +  + +A + F+ G+ +Y+   P G+ +  +      + K
Sbjct: 186 VQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCIGFAIK 245

Query: 386 KR 391
            R
Sbjct: 246 NR 247

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>S15A1_MOUSE (Q9JIP7) Oligopeptide transporter, small intestine isoform (Peptide|
           transporter 1) (Intestinal H(+)/peptide cotransporter)
           (Solute carrier family 15 member 1) (Proton-coupled
           dipeptide cotransporter)
          Length = 709

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
 Frame = +2

Query: 50  LYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISG--TVVVW 223
           L L+++GTGG+K  +   G DQ+++    Q K++  FFS F++AIN G  +S   T ++ 
Sbjct: 129 LALIALGTGGIKPCVSAFGGDQFEEG---QEKQRNRFFSIFYLAINGGSLLSTIITPILR 185

Query: 224 IQ------QNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFVASFK 385
           +Q      Q   + L FG+ +  + +A + F+ G+ +Y+   P G+ +  +      + K
Sbjct: 186 VQQCGIHSQQACYPLAFGVPAALMAVALIVFVLGSGMYKKFQPQGNIMGKVAKCIGFAIK 245

Query: 386 KR 391
            R
Sbjct: 246 NR 247

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>OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide transporter|
           CPTA)
          Length = 785

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   IXPSCPGFQYFVLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIA 181
           I PS       +    L +V +GTGG+K  +   G DQ+       ++    FFS F+ +
Sbjct: 121 IAPSGSSHHPLLDLLGLLIVGLGTGGIKPCVSAFGGDQFP---AHYTRMISLFFSMFYFS 177

Query: 182 INLGVFISGTVVVWIQQ------NVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGS 343
           IN G  IS  +  + +       +  + L FGI ++ +I+AT+ F+AG+  Y+   P  +
Sbjct: 178 INAGSLISMWLTPYFRSMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYKKVPPKEN 237

Query: 344 PLKSLVAVFVASFKKRKVEVPADS-----SILFDGNDADLTNEAPN 466
            +  ++     + +K+                 DG+D  L+ E  N
Sbjct: 238 IIFKVIGTITTALRKKASSSSTHQRSHWLEYSLDGHDCALSTECKN 283

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>OPT2_CAEEL (Q21219) Oligopeptide transporter 2 (Di-/tri-peptide transporter|
           CPTB)
          Length = 835

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +2

Query: 44  ASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVW 223
           + L +++ GTGG+K  +   G DQ++   L Q +    FFS F+ +IN G  IS  +   
Sbjct: 149 SGLLIIAFGTGGIKPCVSAFGGDQFE---LGQERMLSLFFSMFYFSINAGSMISTFISPI 205

Query: 224 IQ------QNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLP 334
            +      Q+  + + FGI ++ +I+AT+ F+ G+  Y+   P
Sbjct: 206 FRSQPCLGQDSCYPMAFGIPAILMIVATLVFMGGSFWYKKNPP 248

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>OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3|
          Length = 701

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
 Frame = +2

Query: 41  FASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVV 220
           F+ L++++  TG +K  +    ADQ+ +   +Q   +  FFS+F+ AIN G   +  +  
Sbjct: 117 FSGLFVIAFATGCIKPCVSAFAADQFTE---DQKDLRSQFFSFFYFAINGGSLFAIIITP 173

Query: 221 WIQQNV-------AWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKS-LVAVFVA 376
            ++  V        + L FG+  V +++A + FL G  +Y+   P+   + S +VAV   
Sbjct: 174 ILRGRVQCFGNAHCFPLAFGVPGVLMLLALILFLMGWSMYKKHPPSKENVGSKVVAVIYT 233

Query: 377 SFKK 388
           S +K
Sbjct: 234 SLRK 237

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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
 Frame = +2

Query: 47  SLYLVSIGTGGVKSALLPLGADQYDDSN-------------LEQSKKKQAFFSWFFIAIN 187
           ++  +S G+G +K  LLPL  DQY +               L++ K      + F++AIN
Sbjct: 200 AIITLSAGSGLMKPNLLPLVLDQYPEERDMVKVLPTGESIILDREKSLSRITNVFYLAIN 259

Query: 188 LGVFISGTVVVWIQQNVAWSLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAV 367
           +G F+      + ++ V + L F +  +  II  +      P  +++ P G  + ++V +
Sbjct: 260 IGAFLQ-IATSYCERRVGFWLAFFVPMILYIIVPIFLFIVKPKLKIKPPQGQVMTNVVKI 318

Query: 368 FVASFKKRKVEVPADSSILFDGNDADLTNEAPNKLAHTEGFRCLDKAAVVLGDQEI 535
               F    ++       L++G   D    +  +   T  +    K+A+   DQ I
Sbjct: 319 LAVLFSGNFIK------RLWNGTFWDHARPSHMEARGTIYYNSKKKSAITWSDQWI 368

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>DTPT_LACLA (P36574) Di-/tripeptide transporter|
          Length = 497

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 48/90 (53%)
 Frame = +2

Query: 38  LFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVV 217
           LF +L+L+ +GTG +K  +  +    Y     +   ++   F+ F + IN+G  I+  +V
Sbjct: 116 LFVALFLIILGTGMLKPNISNMVGHLYS----KDDSRRDTGFNIFVVGINMGSLIAPLIV 171

Query: 218 VWIQQNVAWSLGFGISSVCIIIATVAFLAG 307
             + Q V + LGF ++++ +I A  A+  G
Sbjct: 172 GTVGQGVNYHLGFSLAAIGMIFALFAYWYG 201

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>YBGH_ECOLI (P75742) Inner membrane transporter ybgH|
          Length = 493

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 26/90 (28%), Positives = 48/90 (53%)
 Frame = +2

Query: 38  LFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVV 217
           L+ SL ++  G G  KS +  L  + Y+ ++     ++   FS  + A N+G  I+    
Sbjct: 103 LYLSLAIIVCGYGLFKSNVSCLLGELYEPTD----PRRDGGFSLMYAAGNVGSIIAPIAC 158

Query: 218 VWIQQNVAWSLGFGISSVCIIIATVAFLAG 307
            + Q+  +W++GFG+++V +I   V FL G
Sbjct: 159 GYAQEEYSWAMGFGLAAVGMIAGLVIFLCG 188

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>YCLF_BACSU (P94408) Hypothetical transporter yclF|
          Length = 492

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 23/86 (26%), Positives = 48/86 (55%)
 Frame = +2

Query: 41  FASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVV 220
           + S+ L+ +GTG +K  +  +  D Y     ++  ++ + FS F++ INLG  ++  +V 
Sbjct: 122 YISMVLIIVGTGLLKPNVSSVVGDLYT----KEDPRRDSGFSIFYMGINLGGLLAPLIVG 177

Query: 221 WIQQNVAWSLGFGISSVCIIIATVAF 298
            + Q   + LGFG ++V +++  + F
Sbjct: 178 TLGQKYNYHLGFGAAAVGMLLGLIVF 203

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>TPPB_ECOLI (P77304) Tripeptide permease tppB|
          Length = 500

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 19/88 (21%), Positives = 44/88 (50%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTV 214
           +++  +  +++G G  K+    L +  Y+ ++     +    F+ +++++N+G F S   
Sbjct: 114 IVYMGMAAIAVGNGLFKANPSSLLSTCYEKND----PRLDGAFTMYYMSVNIGSFFSMIA 169

Query: 215 VVWIQQNVAWSLGFGISSVCIIIATVAF 298
             W+     WS+ F +S V ++I  V F
Sbjct: 170 TPWLAAKYGWSVAFALSVVGLLITIVNF 197

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>TPPB_ECOL6 (Q8FH91) Tripeptide permease tppB|
          Length = 500

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 19/88 (21%), Positives = 44/88 (50%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTV 214
           +++  +  +++G G  K+    L +  Y+ ++     +    F+ +++++N+G F S   
Sbjct: 114 IVYMGMAAIAVGNGLFKANPSSLLSTCYEKND----PRLDGAFTMYYMSVNIGSFFSMIA 169

Query: 215 VVWIQQNVAWSLGFGISSVCIIIATVAF 298
             W+     WS+ F +S V ++I  V F
Sbjct: 170 TPWLAAKYGWSVAFALSVVGLLITIVNF 197

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>TPPB_ECO57 (Q8X651) Tripeptide permease tppB|
          Length = 500

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 19/88 (21%), Positives = 44/88 (50%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTV 214
           +++  +  +++G G  K+    L +  Y+ ++     +    F+ +++++N+G F S   
Sbjct: 114 IVYMGMAAIAVGNGLFKANPSSLLSTCYEKND----PRLDGAFTMYYMSVNIGSFFSMIA 169

Query: 215 VVWIQQNVAWSLGFGISSVCIIIATVAF 298
             W+     WS+ F +S V ++I  V F
Sbjct: 170 TPWLAAKYGWSVAFALSVVGLLITIVNF 197

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>TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB|
          Length = 501

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQY--DDSNLEQSKKKQAFFSWFFIAINLGVFISG 208
           +++  +  +++G G  K+    L +  Y  DD  L+ +      F+ +++++N+G F S 
Sbjct: 114 IVYMGMAAIAVGNGLFKANPSSLLSTCYAKDDPRLDGA------FTMYYMSVNIGSFFSM 167

Query: 209 TVVVWIQQNVAWSLGFGISSVCIIIATVAF 298
               W+     WS  F +S V ++I  V F
Sbjct: 168 LATPWLAARYGWSTAFALSVVGMLITVVNF 197

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>TPPB_SALTI (Q8Z6Q5) Tripeptide permease tppB|
          Length = 501

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQY--DDSNLEQSKKKQAFFSWFFIAINLGVFISG 208
           +++  +  +++G G  K+    L +  Y  DD  L+ +      F+ +++++N+G F S 
Sbjct: 114 IVYMGMAAIAVGNGLFKANPSSLLSTCYAKDDPRLDGA------FTMYYMSVNIGSFFSM 167

Query: 209 TVVVWIQQNVAWSLGFGISSVCIIIATVAF 298
               W+     WS  F +S V ++I  V F
Sbjct: 168 LATPWLAARYGWSTAFALSVVGMLITVVNF 197

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>DTPT_LACHE (O07380) Di-/tripeptide transporter|
          Length = 497

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTV 214
           VL+ S+ L+ +GTG +K    P  +D        +  ++ A FS F   INLG  I+  +
Sbjct: 79  VLYRSIALIVVGTGLLK----PNVSDMVGGLYSVEDPRRDAGFSIFVFGINLGSIIAPWL 134

Query: 215 VVWIQQ---------NVAWSLGFGISSVCIIIATVAFLAGTPIY 319
           V W  Q          + +  GF +++V +    V ++ G   Y
Sbjct: 135 VPWAAQGFGVHIFGSQLNFHAGFSLAAVGMFFGLVQYVLGGKKY 178

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>YJDL_ECOLI (P39276) Inner membrane transporter yjdL|
          Length = 485

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 24/92 (26%), Positives = 41/92 (44%)
 Frame = +2

Query: 32  FVLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGT 211
           F L+ +L ++  G G  KS +  L  + YD    E   ++   FS  + A N+G   +  
Sbjct: 100 FSLYLALAIIICGYGLFKSNISCLLGELYD----ENDHRRDGGFSLLYAAGNIGSIAAPI 155

Query: 212 VVVWIQQNVAWSLGFGISSVCIIIATVAFLAG 307
                 Q   W +GF ++   + I  + FL+G
Sbjct: 156 ACGLAAQWYGWHVGFALAGGGMFIGLLIFLSG 187

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>EXUT_ECOLI (P0AA78) Hexuronate transporter|
          Length = 472

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +2

Query: 74  GGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQQNVAWSLG 253
           G  ++A++P G      S    +K++     +F +  ++G  I+  +VVW     +W + 
Sbjct: 149 GAAEAAMIPAGLKA--SSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMA 206

Query: 254 FGISSVCIIIATVAFL 301
           F IS     I  +A+L
Sbjct: 207 FIISGALSFIWAMAWL 222

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>EXUT_ECO57 (P0AA79) Hexuronate transporter|
          Length = 472

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +2

Query: 74  GGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVVWIQQNVAWSLG 253
           G  ++A++P G      S    +K++     +F +  ++G  I+  +VVW     +W + 
Sbjct: 149 GAAEAAMIPAGLKA--SSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMA 206

Query: 254 FGISSVCIIIATVAFL 301
           F IS     I  +A+L
Sbjct: 207 FIISGALSFIWAMAWL 222

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>ENB1_YEAST (Q08299) Siderophore iron transporter ENB1 (Siderophore iron|
           transporter ARN4) (Enterobactin permease)
          Length = 606

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = +2

Query: 38  LFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVV 217
           LFA + +   G  G +     L  D      L   + +    + F I + +  ++SG +V
Sbjct: 155 LFAGIVIQQFGYSGFRLLATALTGD------LSGLRDRTFAMNIFLIPVIINTWVSGNIV 208

Query: 218 VWIQQNVA---WSLGFGISSVCIIIATV 292
             +  NVA   W  G+GI  + + I+T+
Sbjct: 209 SSVAGNVAPYKWRWGYGIFCIIVPISTL 236

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>ENK16_HUMAN (P61569) HERV-K_10p14 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) [Includes: Truncated surface
           protein (SU)]
          Length = 286

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
 Frame = +2

Query: 245 SLGFGISSVCIIIATVAFLAGTPIYRVQLPTGSPLKSLVAVFVASFKKR-KVEVPAD--- 412
           S G+    +C+  A    +     + V+ PT SP+  +++  V+    R +V    D   
Sbjct: 155 STGYRYPPICLGRAPGCLMPAVQNWLVEGPTVSPISRIISYMVSGMSLRPRVNYLQDFSY 214

Query: 413 -SSILFDGNDADLTNEAPNKLAHTEGF---RCLDKAAVVLGDQEIKESLSGRPWMLCTV 577
             S+ F         E P    +TE      C+  +AV+L + E    +   PW+  T+
Sbjct: 215 QRSLKFRPKGKPCPKEIPKGSKNTEVLVWEECVANSAVILQNNEFGTIIDWAPWVNSTM 273

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>PCDB5_HUMAN (Q9Y5E4) Protocadherin beta 5 precursor (PCDH-beta5)|
          Length = 795

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
 Frame = +2

Query: 317 YRVQLPTGSPLKSLVAVFVASFKKRKVEVPADSSI---LFDGNDADLTNEAPNKLAHTEG 487
           Y VQ+P  SPL SLV V  A    R ++  A  S+   LF G++         K A    
Sbjct: 247 YEVQVPENSPLNSLVVVVSA----RDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEIRL 302

Query: 488 FRCLDKAAVVLGDQEIKESLSGRPWMLCTV 577
            R LD  A    + EI  +  G     CTV
Sbjct: 303 KRALDFEATPYYNVEIVATDGGGLSGKCTV 332

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>YHIP_ECOLI (P36837) Inner membrane transporter yhiP|
          Length = 489

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/90 (21%), Positives = 45/90 (50%)
 Frame = +2

Query: 35  VLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTV 214
           ++F +L  +++G G  K+    L +  Y   +     +    F+ F+++IN+G  I+ ++
Sbjct: 107 LIFIALGTIAVGNGLFKANPASLLSKCYPPKD----PRLDGAFTLFYMSINIGSLIALSL 162

Query: 215 VVWIQQNVAWSLGFGISSVCIIIATVAFLA 304
              I     +S+ + +    +IIA + ++A
Sbjct: 163 APVIADRFGYSVTYNLCGAGLIIALLVYIA 192

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>TLC1_CHLMU (Q9PKX5) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)|
          Length = 529

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 21/74 (28%), Positives = 40/74 (54%)
 Frame = +2

Query: 41  FASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFFSWFFIAINLGVFISGTVVV 220
           FA+ Y++S   G V  +L+  G    + + + ++K+   F++ F +  N+ + ISG  +V
Sbjct: 149 FAAFYVLSELWGSVMLSLMFWGFAN-EITKISEAKR---FYALFGVGANVALLISGPAIV 204

Query: 221 WIQQNVAWSLGFGI 262
           W    +  SLG G+
Sbjct: 205 W-SSKLRASLGEGV 217

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>CAPS_DROME (Q9NHE5) Calcium-dependent secretion activator (dCAPS)|
          Length = 1436

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = +3

Query: 108  LISMMIQTLNRVKR-SKRSLAGSSLPLTLVSSSRGPLLYGYSKMLLGLLDSASHRYASLL 284
            L+S++  TL+++ R  + SL GS L  T VSSS   L  GY       +D    + A  L
Sbjct: 1233 LMSVLESTLSKLARYDEGSLIGSILSFTNVSSSGKDLGQGYVNFFRNNMDQVRGKIADDL 1292

Query: 285  PQLPSWQEHQSTGFNFL 335
              L  +++  S   N L
Sbjct: 1293 WTLHFFEQWYSQQINML 1309

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>PCDB5_PANTR (Q5DRC9) Protocadherin beta 5 precursor (PCDH-beta5)|
          Length = 795

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
 Frame = +2

Query: 314 IYRVQLPTGSPLKSLVAVFVASFKKRKVEVPADSSI---LFDGNDADLTNEAPNKLAHTE 484
           +Y VQ+P  SPL SLV V  A    R ++  A  S+   LF G++         K     
Sbjct: 246 LYEVQVPENSPLNSLVVVVSA----RDLDAGAYGSVAYALFQGDEVTQPFVIDEKTGEIR 301

Query: 485 GFRCLDKAAVVLGDQEIKESLSGRPWMLCTV 577
             R LD  A    + EI  +  G     CTV
Sbjct: 302 LKRALDFEATPYYNVEIVATDGGGLSGKCTV 332

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>YCR3_ENTAG (Q01334) Hypothetical 29.9 kDa protein in crtE 3'region (ORF3)|
          Length = 272

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 32  FVLFASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAF-FSWFFIAINLGVFISG 208
           FVL    +++S       + +  + AD  D     Q K+     FS F   + LG+ +SG
Sbjct: 143 FVLVPLTFIISTLYQATTTLMWVMMADVADYGEWSQGKRMDGIIFSTFLAVLKLGMALSG 202

Query: 209 TVVVWIQQNVAWSLGF 256
            +       V W+LGF
Sbjct: 203 AI-------VGWTLGF 211

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>PCDBG_HUMAN (Q9NRJ7) Protocadherin beta 16 precursor (PCDH-beta16)|
           (Protocadherin 3X)
          Length = 776

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 311 PIYRVQLPTGSPLKSLVAVFVA 376
           PIY+VQ+P  SPL SLVA   A
Sbjct: 245 PIYKVQIPENSPLGSLVATVSA 266

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>MRAY_LACLA (Q9CH70) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 329

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
 Frame = +2

Query: 164 SWFFIAINLGVFISGTVVVWIQQNVAWSLGF-------GISSVCIIIATVAF---LAGTP 313
           SW F   N+G+F S  +++W+   V WS          G++S+ + I+  A+        
Sbjct: 143 SWEF---NIGIFFSIFIIIWL---VGWSNAVNLTDGIDGLASITVAISLTAYAVIAVAHQ 196

Query: 314 IYRVQLPTGSPLKSLVAVFVASFKKRKVEVPADSSILFDG 433
            Y V L   S +  L+  FV + K  K+ +    S+   G
Sbjct: 197 QYDVLLIILSVIGGLLGFFVFNHKPAKIFMGDVGSLALGG 236

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>GLP2R_RAT (Q9Z0W0) Glucagon-like peptide 2 receptor precursor (GLP-2|
           receptor) (GLP-2-R) (GLP-2R)
          Length = 550

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 247 SWIRHLIGMHHYCHSCLLGRNTNLQGSTS 333
           SW R L+  H  C +C+LG+N    G  S
Sbjct: 450 SWGRFLLARHWGCRTCVLGKNFRFLGKCS 478

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>PRI2_DROME (Q9VPH2) DNA primase large subunit (EC 2.7.7.-)|
          Length = 533

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = -3

Query: 256 ESKRPSNILLYPYNNGPRDEDTKVNGNEEPAKERLLL 146
           E+K P N++LY Y   P  ED  ++  EE A ERL L
Sbjct: 21  ETKYPHNVMLYHY---PPTEDVHIDEFEELALERLRL 54

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>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.2)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 1,
            cardiac muscle) (Smooth muscle calcium channel blocker
            receptor)
          Length = 2171

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 532  DKGEPFRASMDAMHCNSGGGSEDPCPDASNMVHQRVLCSIDVPN 663
            D  E   +S  ++HC S  G   PC   S+   +    S+ VP+
Sbjct: 2008 DSSEKLNSSFPSIHCGSWSGENSPCRGDSSAARRARPVSLTVPS 2051

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>TLC1_CHLTR (O84068) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)|
          Length = 528

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
 Frame = +2

Query: 2   IXPSCPGFQYFVL------FASLYLVSIGTGGVKSALLPLGADQYDDSNLEQSKKKQAFF 163
           I PS  GF  F+       FA  Y++S   G V  +L+  G    + + + ++K+   F+
Sbjct: 132 ILPS--GFMGFIAMLRNWTFAVFYVLSELWGSVMLSLMFWGFAN-EITKISEAKR---FY 185

Query: 164 SWFFIAINLGVFISGTVVVWIQQNVAWSLGFGI 262
           + F +  N+ + ISG  ++W    +  SLG G+
Sbjct: 186 ALFGVGANVALLISGPAIIW-SSKLRASLGEGV 217

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>DPO3_STRP3 (Q8K5S8) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1465

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = +2

Query: 362 AVFVASFKKRKVEVPADSSIL----FDGNDADLTNEAPNKLAHTEGFRCLDKAAVVLGDQ 529
           A F +SF K KV    D  I+    F  ND    N  PN +   E F        ++ DQ
Sbjct: 106 ASFKSSFSKLKVTYEDDKLIIAAPGFVNNDHFRNNHLPNLVKQLEAFGFGTLTIDMVSDQ 165

Query: 530 EIKESLS 550
           E+ E L+
Sbjct: 166 EMTEHLT 172

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>PTR2_SCHPO (Q9P380) Probable peptide transporter ptr2 (Peptide permease ptr2)|
          Length = 618

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +2

Query: 47  SLYLVSIGTGGVKSALLPLGADQ 115
           SL ++ +GTGG+KS + PL A+Q
Sbjct: 196 SLIIIGLGTGGIKSNVSPLMAEQ 218

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>ASSY_RHILO (Q98E81) Argininosuccinate synthase (EC 6.3.4.5)|
           (Citrulline--aspartate ligase)
          Length = 407

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 535 KGE-PFRASMDAMHCNSGGGS-EDPCPDASNMVHQRVLCSIDVPN 663
           +GE PF    + +H +S G   EDP  +    VHQR +  +D P+
Sbjct: 176 RGEAPFSVDANLLHSSSEGKVLEDPWSEPPEFVHQRTVSPMDAPD 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,262,121
Number of Sequences: 219361
Number of extensions: 2360417
Number of successful extensions: 6742
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 6450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6711
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result