| Clone Name | bags37k17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter (OSJNBa0056G17.8), mRNA Length = 1748 Score = 283 bits (143), Expect = 4e-73 Identities = 410/499 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 454 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 513 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 514 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 573 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 574 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 633 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 634 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 693 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 694 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 753 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 754 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 813 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 814 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 873 Query: 438 atgctgatttaaccaatgaagcaccaaacaaattggcacatactgaaggattcaggtgct 497 |||||||||||| ||||| | | || |||| | ||||||||||| || |||||||| | Sbjct: 874 atgctgatttaagcaatggacaatcagtcaaactagcacatactgatggtttcaggtggt 933 Query: 498 tagataaggctgctgtggt 516 |||||||||| || ||||| Sbjct: 934 tagataaggcggcagtggt 952 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 1017 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 1076 Query: 635 gtg 637 ||| Sbjct: 1077 gtg 1079
>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full insert sequence Length = 1942 Score = 283 bits (143), Expect = 4e-73 Identities = 410/499 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 511 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 570 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 571 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 630 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 631 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 690 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 691 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 750 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 751 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 810 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 811 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 870 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 871 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 930 Query: 438 atgctgatttaaccaatgaagcaccaaacaaattggcacatactgaaggattcaggtgct 497 |||||||||||| ||||| | | || |||| | ||||||||||| || |||||||| | Sbjct: 931 atgctgatttaagcaatggacaatcagtcaaactagcacatactgatggtttcaggtggt 990 Query: 498 tagataaggctgctgtggt 516 |||||||||| || ||||| Sbjct: 991 tagataaggcggcagtggt 1009 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | ||| |||| || |||||| | |||||| Sbjct: 1074 gtaacgcaggtggaggaagtgaagattctgctgcgggtgctgccgatatgggtgaccagc 1133 Query: 635 gtg 637 ||| Sbjct: 1134 gtg 1136
>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full insert sequence Length = 1938 Score = 283 bits (143), Expect = 4e-73 Identities = 410/499 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 501 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 560 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 561 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 620 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 621 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 680 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 681 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 740 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 741 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 800 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 801 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 860 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 861 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 920 Query: 438 atgctgatttaaccaatgaagcaccaaacaaattggcacatactgaaggattcaggtgct 497 |||||||||||| ||||| | | || |||| | ||||||||||| || |||||||| | Sbjct: 921 atgctgatttaagcaatggacaatcagtcaaactagcacatactgatggtttcaggtggt 980 Query: 498 tagataaggctgctgtggt 516 |||||||||| || ||||| Sbjct: 981 tagataaggcggcagtggt 999 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 1064 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 1123 Query: 635 gtg 637 ||| Sbjct: 1124 gtg 1126
>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full insert sequence Length = 1880 Score = 283 bits (143), Expect = 4e-73 Identities = 410/499 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 519 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 578 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 579 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 638 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 639 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 698 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 699 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 758 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 759 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 818 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 819 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 878 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 879 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 938 Query: 438 atgctgatttaaccaatgaagcaccaaacaaattggcacatactgaaggattcaggtgct 497 |||||||||||| ||||| | | || |||| | ||||||||||| || |||||||| | Sbjct: 939 atgctgatttaagcaatggacaatcagtcaaactagcacatactgatggtttcaggtggt 998 Query: 498 tagataaggctgctgtggt 516 |||||||||| || ||||| Sbjct: 999 tagataaggcggcagtggt 1017 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 1082 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 1141 Query: 635 gtg 637 ||| Sbjct: 1142 gtg 1144
>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full insert sequence Length = 1950 Score = 283 bits (143), Expect = 4e-73 Identities = 410/499 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 519 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 578 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 579 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 638 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 639 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 698 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 699 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 758 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 759 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 818 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 819 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 878 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 879 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 938 Query: 438 atgctgatttaaccaatgaagcaccaaacaaattggcacatactgaaggattcaggtgct 497 |||||||||||| ||||| | | || |||| | ||||||||||| || |||||||| | Sbjct: 939 atgctgatttaagcaatggacaatcagtcaaactagcacatactgatggtttcaggtggt 998 Query: 498 tagataaggctgctgtggt 516 |||||||||| || ||||| Sbjct: 999 tagataaggcggcagtggt 1017 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 1082 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 1141 Query: 635 gtg 637 ||| Sbjct: 1142 gtg 1144
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 266 bits (134), Expect = 8e-68 Identities = 362/438 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 50176 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 50235 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 50236 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 50295 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 50296 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 50355 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 50356 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 50415 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 50416 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 50475 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 50476 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 50535 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 50536 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 50595 Query: 438 atgctgatttaaccaatg 455 |||||||||||| ||||| Sbjct: 50596 atgctgatttaagcaatg 50613 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 51155 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 51214 Query: 635 gtg 637 ||| Sbjct: 51215 gtg 51217
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 266 bits (134), Expect = 8e-68 Identities = 362/438 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 22595507 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 22595566 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 22595567 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 22595626 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 22595627 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 22595686 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 22595687 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 22595746 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 22595747 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 22595806 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 22595807 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 22595866 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 22595867 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 22595926 Query: 438 atgctgatttaaccaatg 455 |||||||||||| ||||| Sbjct: 22595927 atgctgatttaagcaatg 22595944 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 22596486 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 22596545 Query: 635 gtg 637 ||| Sbjct: 22596546 gtg 22596548
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 266 bits (134), Expect = 8e-68 Identities = 362/438 (82%) Strand = Plus / Plus Query: 18 cagggtttcagtattttgtcttgtttgcttcactataccttgtctcgattgggaccggag 77 |||||||||||||||||||||| || | | || |||||| | ||| |||| ||||| | Sbjct: 22607975 cagggtttcagtattttgtcttcttcaccgcgctctaccttatttcggttggcaccgggg 22608034 Query: 78 gggttaaatcagctttgctcccccttggggctgatcagtatgatgattcaaaccttgaac 137 | || |||||||| || |||||| |||| ||||| ||||| | ||||||||||| ||| Sbjct: 22608035 gtgtcaaatcagcattactcccctttggagctgaccagtacaacgattcaaacctcgaag 22608094 Query: 138 agagtaaaaagaagcaagcgttctttagctggttcttcattgccattaaccttggtgtct 197 ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| || | Sbjct: 22608095 agagtaaaaagaagcaatctttctttagcttgttcttcattgctatcaaccttggagtgt 22608154 Query: 198 tcatctcggggaccgttgttgtatggatacagcaaaatgttgcttggtctcttggattcg 257 |||| ||||| || || || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 22608155 tcatttcgggcactgtcgtcgtttggatacagcaaaatgttgcttggtctctcggattcg 22608214 Query: 258 gcatctcatcggtatgcatcattattgccacagttgccttcttggcaggaacaccaatct 317 ||||||| || ||||| | || |||||||||||||||| ||||||||||||||| | | Sbjct: 22608215 gcatctcctcaatatgccttgttgttgccacagttgcctttttggcaggaacaccagtgt 22608274 Query: 318 acagggttcaacttcctaccggaagcccactgaaaagtcttgtagcggtgtttgtcgcgt 377 ||| ||| || ||||| | ||||||||||| || ||| ||||| ||| ||||| || | Sbjct: 22608275 acaaggtccagcttcccagtggaagcccactcaagagtgttgtaatggtttttgttgcct 22608334 Query: 378 catttaaaaagagaaaagtagaggttcctgctgatagctcaatattgtttgatgggaatg 437 | ||||| ||||||||| | ||||||||||| |||| | || | ||| ||| ||| ||| Sbjct: 22608335 cttttaagaagagaaaactggaggttcctgccgataacgcactcctgtatgaaggggatg 22608394 Query: 438 atgctgatttaaccaatg 455 |||||||||||| ||||| Sbjct: 22608395 atgctgatttaagcaatg 22608412 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 575 gtaactcaggtggaggaagtgaagatccttgtccggatgcttccaatatggttcaccagc 634 ||||| |||||||||||||||||||| || | |||||||| || |||||| | |||||| Sbjct: 22608954 gtaacgcaggtggaggaagtgaagattctgctgcggatgctgccgatatgggtgaccagc 22609013 Query: 635 gtg 637 ||| Sbjct: 22609014 gtg 22609016
>ref|NM_121343.3| Arabidopsis thaliana transporter AT5G13400 mRNA, complete cds Length = 3001 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 556 tccatggatgctatgcactgtaactcaggtggaggaagtgaagat 600 |||||||| ||||||||| ||||| || || |||||||||||||| Sbjct: 1103 tccatggaagctatgcacagtaacacaagtagaggaagtgaagat 1147
>emb|AL163572.1|ATT22N19 Arabidopsis thaliana DNA chromosome 5, BAC clone T22N19 (ESSA project) Length = 68948 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 556 tccatggatgctatgcactgtaactcaggtggaggaagtgaagat 600 |||||||| ||||||||| ||||| || || |||||||||||||| Sbjct: 40816 tccatggaagctatgcacagtaacacaagtagaggaagtgaagat 40772
>gb|AY128754.1| Arabidopsis thaliana peptide transporter-like protein (At5g13400) mRNA, complete cds Length = 1993 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 556 tccatggatgctatgcactgtaactcaggtggaggaagtgaagat 600 |||||||| ||||||||| ||||| || || |||||||||||||| Sbjct: 1077 tccatggaagctatgcacagtaacacaagtagaggaagtgaagat 1121
>gb|AY072338.1| Arabidopsis thaliana peptide transporter-like protein (At5g13400; T22N19_50) mRNA, complete cds Length = 2051 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 556 tccatggatgctatgcactgtaactcaggtggaggaagtgaagat 600 |||||||| ||||||||| ||||| || || |||||||||||||| Sbjct: 1097 tccatggaagctatgcacagtaacacaagtagaggaagtgaagat 1141
>emb|BX831321.1|CNS0A1P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2133 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 556 tccatggatgctatgcactgtaactcaggtggaggaagtgaagat 600 |||||||| ||||||||| ||||| || || |||||||||||||| Sbjct: 1194 tccatggaagctatgcacagtaacacaagtagaggaagtgaagat 1238
>ref|XM_462726.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1943 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 569 tgcactgtaactcaggtggaggaagtgaagatcct 603 |||||||| || ||||||||||| ||||||||||| Sbjct: 1090 tgcactgtgacccaggtggaggaggtgaagatcct 1124
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 569 tgcactgtaactcaggtggaggaagtgaagatcct 603 |||||||| || ||||||||||| ||||||||||| Sbjct: 178695 tgcactgtgacccaggtggaggaggtgaagatcct 178729
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 569 tgcactgtaactcaggtggaggaagtgaagatcct 603 |||||||| || ||||||||||| ||||||||||| Sbjct: 20365 tgcactgtgacccaggtggaggaggtgaagatcct 20399
>dbj|AK070557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L16, full insert sequence Length = 1943 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 569 tgcactgtaactcaggtggaggaagtgaagatcct 603 |||||||| || ||||||||||| ||||||||||| Sbjct: 1090 tgcactgtgacccaggtggaggaggtgaagatcct 1124
>dbj|AK058723.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E11, full insert sequence Length = 1924 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 569 tgcactgtaactcaggtggaggaagtgaagatcct 603 |||||||| || ||||||||||| ||||||||||| Sbjct: 1044 tgcactgtgacccaggtggaggaggtgaagatcct 1078
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 569 tgcactgtaactcaggtggaggaagtgaagatcct 603 |||||||| || ||||||||||| ||||||||||| Sbjct: 127241 tgcactgtgacccaggtggaggaggtgaagatcct 127275
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 157675 tatgcactgtgactcaggtggaagaactgaagat 157642
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 75715 tatgcactgtgactcaggtggaagaactgaagat 75682
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 28892420 tatgcactgtgactcaggtggaagaactgaagat 28892387
>emb|BX548035.8| Zebrafish DNA sequence from clone CH211-190F24 in linkage group 24, complete sequence Length = 156349 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 439 tgctgatttaaccaatgaagcaccaa 464 ||||||||||||||||||| |||||| Sbjct: 65487 tgctgatttaaccaatgaaccaccaa 65462
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 28983842 tatgcactgtgactcaggtggaagaactgaagat 28983809
>dbj|AK099012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116K11, full insert sequence Length = 2199 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 1209 tatgcactgtgactcaggtggaagaactgaagat 1242
>dbj|AK072691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139H09, full insert sequence Length = 2525 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 1566 tatgcactgtgactcaggtggaagaactgaagat 1599
>dbj|AK070804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069K06, full insert sequence Length = 2228 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 1234 tatgcactgtgactcaggtggaagaactgaagat 1267
>dbj|AB067653.1| Oryza sativa (japonica cultivar-group) OsPTR1 gene for peptide transporter, complete cds Length = 4011 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 3055 tatgcactgtgactcaggtggaagaactgaagat 3088
>dbj|AB067652.1| Oryza sativa (japonica cultivar-group) OsPTR1 mRNA for peptide transporter, complete cds Length = 2070 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 567 tatgcactgtaactcaggtggaggaagtgaagat 600 |||||||||| ||||||||||| ||| ||||||| Sbjct: 1088 tatgcactgtgactcaggtggaagaactgaagat 1121
>emb|CR388365.9| Zebrafish DNA sequence from clone DKEY-24I24 in linkage group 16, complete sequence Length = 150795 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 tttcagtattttgtcttgttt 43 ||||||||||||||||||||| Sbjct: 133891 tttcagtattttgtcttgttt 133911
>gb|AY098893.1| Citrus hybrid cultivar plastidic ATP/ADP transporter mRNA, partial cds; nuclear gene for plastid product Length = 2122 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ttaaccttggtgtcttcatct 203 ||||||||||||||||||||| Sbjct: 1456 ttaaccttggtgtcttcatct 1436
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 ggaatgatgctgatttaacca 452 ||||||||||||||||||||| Sbjct: 1672432 ggaatgatgctgatttaacca 1672412
>gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, complete sequence Length = 184243 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtattttgtcttgtttgctt 47 |||||||||||||||||||| Sbjct: 16709 gtattttgtcttgtttgctt 16728
>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence Length = 173589 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tttaaaaagagaaaagtaga 399 |||||||||||||||||||| Sbjct: 173350 tttaaaaagagaaaagtaga 173369
>ref|NM_175349.2| Mus musculus lactate dehydrogenase A-like 6B (Ldhal6b), mRNA Length = 1463 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 102 actcaggtggaggaagtgaa 83
>gb|AY645843.1| Lactuca sp. Mavrodiev s.n. external transcribed spacer, partial sequence Length = 523 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgttgcttggtctcttggat 254 |||||||||||||||||||| Sbjct: 361 tgttgcttggtctcttggat 380
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ttagctggttcttcattgcc 181 |||||||||||||||||||| Sbjct: 1109403 ttagctggttcttcattgcc 1109422
>gb|AY587008.1| Helianthus tuberosus chloroplast ATP/ADP transporter protein (AAT) mRNA, complete cds; nuclear gene for chloroplast product Length = 1464 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttaaccttggtgtcttcatc 202 |||||||||||||||||||| Sbjct: 1139 ttaaccttggtgtcttcatc 1120
>gb|AC007598.7| Homo sapiens chromosome 16 clone RP11-165M1, complete sequence Length = 186120 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tgatgggaatgatgctgatt 446 |||||||||||||||||||| Sbjct: 143762 tgatgggaatgatgctgatt 143743
>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete sequence Length = 166272 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 tcaggtgcttagataaggctgctg 512 ||||||||||||| |||||||||| Sbjct: 130000 tcaggtgcttagagaaggctgctg 130023
>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtattttgtcttgtttgctt 47 |||||||||||||||||||| Sbjct: 116521 gtattttgtcttgtttgctt 116540
>gb|AC122894.2| Mus musculus BAC clone RP23-69F3 from 1, complete sequence Length = 205318 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tttaaaaagagaaaagtaga 399 |||||||||||||||||||| Sbjct: 120271 tttaaaaagagaaaagtaga 120252
>emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chromosome 9 Contains a CpG island, complete sequence Length = 154698 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tcatttaaaaagagaaaagt 396 |||||||||||||||||||| Sbjct: 133371 tcatttaaaaagagaaaagt 133352
>emb|AL590680.11| Human DNA sequence from clone RP11-246G15 on chromosome 6, complete sequence Length = 21388 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 agtaaaaagaagcaagcgttcttt 163 ||||||||||||||||| |||||| Sbjct: 8289 agtaaaaagaagcaagccttcttt 8312
>emb|AL513355.16| Human DNA sequence from clone RP11-248J23 on chromosome 10 Contains part of two novel genes (FLJ39150), two novel genes and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 113212 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aatgaagcaccaaacaaatt 471 |||||||||||||||||||| Sbjct: 2402 aatgaagcaccaaacaaatt 2383
>emb|AL121771.17|HSJ548G19 Human DNA sequence from clone RP4-548G19 on chromosome 20 Contains the 5' end of the ZFP64 gene for zinc finger protein 64 homolog (mouse) and a CpG island, complete sequence Length = 61579 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 gtcatttaaaaagagaaaag 395 |||||||||||||||||||| Sbjct: 32600 gtcatttaaaaagagaaaag 32581
>gb|AY280363.1| Mus musculus L-lactate dehydrogenase A-like protein mRNA, complete cds Length = 1463 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 102 actcaggtggaggaagtgaa 83
>gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosome 9, complete sequence Length = 196764 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 tcaggtgcttagataaggctgctg 512 ||||||||||||| |||||||||| Sbjct: 98765 tcaggtgcttagagaaggctgctg 98788
>gb|AC084826.4| Genomic sequence for Mus musculus, clone RP23-146L6, complete sequence Length = 196947 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 55333 actcaggtggaggaagtgaa 55314
>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence Length = 167417 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 gaccaagagataaaggagag 543 |||||||||||||||||||| Sbjct: 31021 gaccaagagataaaggagag 31002
>dbj|AK096469.1| Homo sapiens cDNA FLJ39150 fis, clone OCBBF2001473 Length = 2933 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 aatgaagcaccaaacaaatt 471 |||||||||||||||||||| Sbjct: 2029 aatgaagcaccaaacaaatt 2048
>dbj|AK023447.1| Homo sapiens cDNA FLJ13385 fis, clone PLACE1001088 Length = 1892 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tcatttaaaaagagaaaagt 396 |||||||||||||||||||| Sbjct: 1849 tcatttaaaaagagaaaagt 1868
>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 ttaggtgaccaagagataaa 537 |||||||||||||||||||| Sbjct: 81038 ttaggtgaccaagagataaa 81057
>ref|NM_058032.3| Drosophila melanogaster Farnesyl pyrophosphate synthase CG12389-RA (Fpps), mRNA Length = 1511 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ctttagctggttcttcattgccat 183 |||||||||||||||| ||||||| Sbjct: 1213 ctttagctggttcttctttgccat 1190
>dbj|AK139254.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730081C06 product:unclassifiable, full insert sequence Length = 2528 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 1542 actcaggtggaggaagtgaa 1561
>gb|U58760.2| Caenorhabditis elegans cosmid C27A2, complete sequence Length = 29370 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ttcaaaccttgaacagagta 143 |||||||||||||||||||| Sbjct: 18580 ttcaaaccttgaacagagta 18561
>gb|AY071445.1| Drosophila melanogaster RE52884 full length cDNA Length = 1477 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ctttagctggttcttcattgccat 183 |||||||||||||||| ||||||| Sbjct: 1171 ctttagctggttcttctttgccat 1148
>gb|AC093826.2| Homo sapiens chromosome 4 clone RP11-392L5, complete sequence Length = 174277 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tctttagctggttcttcatt 178 |||||||||||||||||||| Sbjct: 15275 tctttagctggttcttcatt 15294
>gb|AC134913.6| Mus musculus BAC clone RP23-195M6 from chromosome 13, complete sequence Length = 223130 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cagagtaaaaagaagcaagc 156 |||||||||||||||||||| Sbjct: 83924 cagagtaaaaagaagcaagc 83943
>dbj|AK077089.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933402O15 product:similar to L-LACTATE DEHYDROGENASE A-LIKE (EC 1.1.1.27) [Homo sapiens], full insert sequence Length = 1387 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 48 actcaggtggaggaagtgaa 29
>gb|AC016603.6| Homo sapiens chromosome 5 clone CTD-2132G23, complete sequence Length = 110879 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 tcaccagcgtgttctatgca 646 |||||||||||||||||||| Sbjct: 49272 tcaccagcgtgttctatgca 49253
>ref|NM_001026822.1| Caenorhabditis elegans C27A2.7 (C27A2.7) mRNA, complete cds Length = 579 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ttcaaaccttgaacagagta 143 |||||||||||||||||||| Sbjct: 54 ttcaaaccttgaacagagta 73
>gb|BC061193.1| Mus musculus lactate dehydrogenase A-like 6B, mRNA (cDNA clone MGC:74334 IMAGE:6704800), complete cds Length = 1418 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 47 actcaggtggaggaagtgaa 28
>gb|AC055764.23| Homo sapiens 3 BAC RP11-803P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 74486 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 610 gatgcttccaatatggttcaccag 633 |||||||||| ||||||||||||| Sbjct: 16376 gatgcttccactatggttcaccag 16399
>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7, complete sequence Length = 237129 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ttcagtattttgtcttgttt 43 |||||||||||||||||||| Sbjct: 147251 ttcagtattttgtcttgttt 147232 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ttcagtattttgtcttgttt 43 |||||||||||||||||||| Sbjct: 146758 ttcagtattttgtcttgttt 146739
>gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, complete sequence Length = 210320 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ttttgtcttgtttgcttcac 50 |||||||||||||||||||| Sbjct: 104531 ttttgtcttgtttgcttcac 104550
>gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C11, complete sequence Length = 204843 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 627 tcaccagcgtgttctatgca 646 |||||||||||||||||||| Sbjct: 46564 tcaccagcgtgttctatgca 46583
>gb|AF132554.1| Drosophila melanogaster GM06581 full insert cDNA Length = 1482 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ctttagctggttcttcattgccat 183 |||||||||||||||| ||||||| Sbjct: 1175 ctttagctggttcttctttgccat 1152
>emb|BX119961.9| Mouse DNA sequence from clone RP23-444M11 on chromosome X, complete sequence Length = 76072 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 ataaggctgctgtggtgtta 520 |||||||||||||||||||| Sbjct: 9181 ataaggctgctgtggtgtta 9162
>gb|AC166064.4| Mus musculus BAC clone RP23-52K8 from chromosome 17, complete sequence Length = 245671 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 actcaggtggaggaagtgaa 597 |||||||||||||||||||| Sbjct: 202214 actcaggtggaggaagtgaa 202233
>emb|AJ009963.1|DME9963 Drosophila melanogaster mRNA for farnesyl pyrophosphate synthase, partial Length = 1264 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ctttagctggttcttcattgccat 183 |||||||||||||||| ||||||| Sbjct: 977 ctttagctggttcttctttgccat 954 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,181,153 Number of Sequences: 3902068 Number of extensions: 6181153 Number of successful extensions: 125507 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125190 Number of HSP's gapped (non-prelim): 304 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)