ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11... 46 2e-05
2APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.1... 39 0.003
3APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11... 39 0.003
4APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1... 39 0.004
5APX3_ORYSA (Q6TY83) Putative L-ascorbate peroxidase 3 (EC 1.11.1... 32 0.31
6APX8_ORYSA (Q69SV0) Probable L-ascorbate peroxidase 8, chloropla... 32 0.53
7APX6_ORYSA (P0C0L1) Probable L-ascorbate peroxidase 6, chloropla... 32 0.53
8APX5_ORYSA (P0C0L0) Probable L-ascorbate peroxidase 5, chloropla... 32 0.53
9APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1... 31 0.70
10RNS10_SHEEP (Q70IB1) Ribonuclease-like protein 10 precursor (Pro... 28 5.9
11APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloropla... 28 5.9
12CHL12_EMENI (P0C1D3) Protein CHL12 28 7.7

>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)|
          Length = 249

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELGYAEA 70
           EKAFFEDYKEAHL+LSELG+A+A
Sbjct: 227 EKAFFEDYKEAHLKLSELGFADA 249



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>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)|
          Length = 249

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELGYAEA 70
           E  FF DY EAHL+LSELG+AEA
Sbjct: 227 EDVFFADYAEAHLKLSELGFAEA 249



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>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)|
          Length = 251

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELGYAE 67
           E AFF DY EAHL+LSELG+AE
Sbjct: 229 EDAFFADYAEAHLKLSELGFAE 250



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>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)|
          Length = 249

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELGYAEA 70
           E AFF DY EAH++LSELG+A+A
Sbjct: 227 EDAFFADYAEAHMKLSELGFADA 249



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>APX3_ORYSA (Q6TY83) Putative L-ascorbate peroxidase 3 (EC 1.11.1.11)|
          Length = 291

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELGY 61
           E AFF DY E+H +LSELG+
Sbjct: 226 EDAFFRDYAESHKKLSELGF 245



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>APX8_ORYSA (Q69SV0) Probable L-ascorbate peroxidase 8, chloroplast precursor|
           (EC 1.11.1.11)
          Length = 478

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELG 58
           ++AFF+DY EAH +LS+LG
Sbjct: 327 QEAFFKDYAEAHAKLSDLG 345



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>APX6_ORYSA (P0C0L1) Probable L-ascorbate peroxidase 6, chloroplast precursor|
           (EC 1.11.1.11)
          Length = 309

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELG 58
           + AFFEDY EAH +LS LG
Sbjct: 279 QDAFFEDYAEAHAKLSNLG 297



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>APX5_ORYSA (P0C0L0) Probable L-ascorbate peroxidase 5, chloroplast precursor|
           (EC 1.11.1.11)
          Length = 320

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELG 58
           + AFFEDY EAH +LS LG
Sbjct: 290 QDAFFEDYAEAHAKLSNLG 308



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>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)|
          Length = 291

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELGY 61
           E  FF+DY E+H +LSELG+
Sbjct: 225 EDTFFKDYAESHKKLSELGF 244



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>RNS10_SHEEP (Q70IB1) Ribonuclease-like protein 10 precursor (Protein Train A)|
           (Fragment)
          Length = 161

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 210 KVWPQANKHYYRDDYL-AVCGLTLTPSLDAEQDHP 109
           +V  Q+NKHY R D +   C   + P+L + +DHP
Sbjct: 96  EVLSQSNKHYLRSDVMDRECNALMAPNLKS-KDHP 129



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>APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloroplast precursor|
           (EC 1.11.1.11)
          Length = 359

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 2   EKAFFEDYKEAHLRLSELG 58
           ++AFF+DY  AH +LS LG
Sbjct: 328 QEAFFKDYAGAHAKLSNLG 346



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>CHL12_EMENI (P0C1D3) Protein CHL12|
          Length = 993

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 281 ISYDRFMASRQTEYNGTPNHXQRSRYGLKPTNIITE 174
           +SY+R +ASR T     P   Q+S YG+   +++ E
Sbjct: 186 VSYERLIASRSTT---APGRAQKSYYGIDIHSLLNE 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,087,836
Number of Sequences: 219361
Number of extensions: 530424
Number of successful extensions: 1136
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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