ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37k06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N21, full insert sequence Length = 2398 Score = 392 bits (198), Expect = e-106 Identities = 486/582 (83%) Strand = Plus / Plus Query: 5 ccaagtatacgttggccgccgcatttcagctaaagctccaggcgcagttgaggtggcgtt 64 ||||||||| |||||||||||||| | |||||| | |||||| || |||||||||| | Sbjct: 429 ccaagtatatgttggccgccgcatgttagctaacggtccaggtgcttctgaggtggcgct 488 Query: 65 aaagtttgagcataaggacagcaaaggatgtagccatggccctccatatgagtggaaggt 124 ||||||||| |||| ||| |||||||| | |||||| ||||| || || ||| |||| Sbjct: 489 aaagtttgaacatagaaccagtaaaggatgcaaccatgggcctccttacgaatggcaggt 548 Query: 125 ttacgatatccttggtggcattcatggggttcctcgagtccactacaaagggcgccaagg 184 |||| | | | |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 549 ttacaacgccatcggtggcattcatggggttcctcgagtccactataaaggacgtcaagg 608 Query: 185 ggattacttcattatggttatggatatgctcggtttcagtctgtgggatgcatgttgtaa 244 || |||| |||| |||||||||||||| || |||||| ||||||| || ||| Sbjct: 609 cgaatactatgttatagttatggatatgctgggacccagtctttgggatgtttggaataa 668 Query: 245 taattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctccat 304 |||||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 669 taattctcacacaatgtctgttgagatggttgcgtgcatcgctattgaagctatctccat 728 Query: 305 acttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaatttctt 364 |||||||||| |||| |||||||||||||| || |||||||||||||| || |||||||| Sbjct: 729 acttgagaaaatgcattcaaaaggatatgttcatggggatgtgaaacctgaaaatttctt 788 Query: 365 gctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggcttagc 424 |||||| ||| |||||| |||||||| || | ||| || || ||||| ||||| ||||| Sbjct: 789 gctagggcctattggaactcctgaagaaaagagactcttccttgtcgatcttggtttagc 848 Query: 425 taccaagtggaaggaaagatcgacaggccatcatgttgagtatgaccagcgacctgatat 484 ||||||||||| || || || |||| || ||||| |||||||||||||||||| | Sbjct: 849 taccaagtggagagatgcttcaactggcctccacgttgactatgaccagcgacctgatgt 908 Query: 485 tttcaggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcag 544 ||||||||| |||||||| ||||||||||||||||||||||| ||||| || || ||| | Sbjct: 909 tttcagggggacagttcgctatgctagtgttcatgcacatctagggagaatcggtagccg 968 Query: 545 gagggatgacttagaatcactagcttatacactagtctttct 586 |||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 969 aagggatgatttagaatctctagcttacacactagtttttct 1010
>dbj|D29694.1|RICYK6 Oryza sativa mRNA, sequence homologous to casein kinase 1-gamma gene Length = 338 Score = 246 bits (124), Expect = 7e-62 Identities = 253/296 (85%) Strand = Plus / Plus Query: 291 gaagctatctccatacttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaa 350 |||||||||||||||||||||||| |||| |||||||||||||| || |||||||||||| Sbjct: 4 gaagctatctccatacttgagaaaatgcattcaaaaggatatgttcatggggatgtgaaa 63 Query: 351 cccgagaatttcttgctaggacctcctggaacccctgaagagaaaaaactgtttctcgtc 410 || || |||||||||||||| ||| |||||| |||||||| || | ||| || || ||| Sbjct: 64 cctgaaaatttcttgctagggcctattggaactcctgaagaaaagagactcttccttgtc 123 Query: 411 gaccttggcttagctaccaagtggaaggaaagatcgacaggccatcatgttgagtatgac 470 || ||||| |||||||||||||||| || || || |||| || ||||| |||||| Sbjct: 124 gatcttggtttagctaccaagtggagagatgcttcaactggcctccacgttgactatgac 183 Query: 471 cagcgacctgatattttcaggggaacagttcgttatgctagtgttcatgcacatcttggg 530 |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 184 cagcgacctgatgttttcagggggacagttcgctatgctagtgttcatgcacatctaggg 243 Query: 531 aggataggcagcaggagggatgacttagaatcactagcttatacactagtctttct 586 || || || ||| | |||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 244 agaatcggtagccgaagggatgatttagaatctctagcttacacactagtttttct 299
>ref|XM_476111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1827 Score = 133 bits (67), Expect = 7e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 242 taataattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctc 301 ||||||||||||| ||||||| ||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 414 taataattcccactcaatgtctgttgaaatggttgcttgtattgctatagaagcaatctc 473 Query: 302 catacttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaattt 361 |||| | ||||| |||| || ||||| ||||| || || ||||| ||||| |||||||| Sbjct: 474 catattggagaagatgcattcgaaagggtatgttcatggtgatgtaaaacctgagaattt 533 Query: 362 cttgctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggctt 421 ||||| ||| | || ||||||| |||||||||||||| ||||| || |||||||| || Sbjct: 534 tttgcttggaaccccaggaaccctggaagagaaaaaactttttcttgttgaccttggatt 593 Query: 422 agctaccaagtggaa 436 |||||| | |||||| Sbjct: 594 agctactaggtggaa 608 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagtgtt 515 |||||||||||||| ||| | |||||||| || |||||||| ||||| ||||||||||| Sbjct: 628 catgttgagtatgatcagaggcctgatatctttaggggaactgttcgctatgctagtgtg 687 Query: 516 catgc 520 ||||| Sbjct: 688 catgc 692
>dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K12, full insert sequence Length = 2696 Score = 133 bits (67), Expect = 7e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 242 taataattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctc 301 ||||||||||||| ||||||| ||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 679 taataattcccactcaatgtctgttgaaatggttgcttgtattgctatagaagcaatctc 738 Query: 302 catacttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaattt 361 |||| | ||||| |||| || ||||| ||||| || || ||||| ||||| |||||||| Sbjct: 739 catattggagaagatgcattcgaaagggtatgttcatggtgatgtaaaacctgagaattt 798 Query: 362 cttgctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggctt 421 ||||| ||| | || ||||||| |||||||||||||| ||||| || |||||||| || Sbjct: 799 tttgcttggaaccccaggaaccctggaagagaaaaaactttttcttgttgaccttggatt 858 Query: 422 agctaccaagtggaa 436 |||||| | |||||| Sbjct: 859 agctactaggtggaa 873 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagtgtt 515 |||||||||||||| ||| | |||||||| || |||||||| ||||| ||||||||||| Sbjct: 893 catgttgagtatgatcagaggcctgatatctttaggggaactgttcgctatgctagtgtg 952 Query: 516 catgc 520 ||||| Sbjct: 953 catgc 957
>dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126I12, full insert sequence Length = 2431 Score = 133 bits (67), Expect = 7e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 242 taataattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctc 301 ||||||||||||| ||||||| ||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 676 taataattcccactcaatgtctgttgaaatggttgcttgtattgctatagaagcaatctc 735 Query: 302 catacttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaattt 361 |||| | ||||| |||| || ||||| ||||| || || ||||| ||||| |||||||| Sbjct: 736 catattggagaagatgcattcgaaagggtatgttcatggtgatgtaaaacctgagaattt 795 Query: 362 cttgctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggctt 421 ||||| ||| | || ||||||| |||||||||||||| ||||| || |||||||| || Sbjct: 796 tttgcttggaaccccaggaaccctggaagagaaaaaactttttcttgttgaccttggatt 855 Query: 422 agctaccaagtggaa 436 |||||| | |||||| Sbjct: 856 agctactaggtggaa 870 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagtgtt 515 |||||||||||||| ||| | |||||||| || |||||||| ||||| ||||||||||| Sbjct: 890 catgttgagtatgatcagaggcctgatatctttaggggaactgttcgctatgctagtgtg 949 Query: 516 catgc 520 ||||| Sbjct: 950 catgc 954
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 123 bits (62), Expect = 7e-25 Identities = 92/102 (90%) Strand = Plus / Minus Query: 485 tttcaggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcag 544 |||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 102471 tttcaggggaacagttcgctatgctagtgttcatgcacatcttgggagaacaggtagcag 102412 Query: 545 gagggatgacttagaatcactagcttatacactagtctttct 586 ||||||||| |||||||| ||||| || || |||||||||| Sbjct: 102411 gagggatgatttagaatctctagcatacacgttagtctttct 102370 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 138 ggtggcattcatggggttcctcgagtccactacaaagggcgccaaggggattacttcatt 197 ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| || Sbjct: 103726 ggtggcattcatgggattccccgagtccactacaaaggacgccaaggggattactttgtt 103667 Query: 198 atggt 202 ||||| Sbjct: 103666 atggt 103662 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 266 tgagatggttgcttgcatagctatcgaagctatctccatacttgagaaagtgcactcaaa 325 ||||||||||||||| || ||||| ||| | |||||||||||||||||| |||| ||||| Sbjct: 103438 tgagatggttgcttgtattgctattgaatcaatctccatacttgagaaaatgcattcaaa 103379 Query: 326 agg 328 ||| Sbjct: 103378 agg 103376 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 5 ccaagtatacgttggccgccgcatttcagctaaagctccaggcgcagttgaggt 58 ||||||||| |||||||||||||| ||||||| | |||||| || |||||||| Sbjct: 104074 ccaagtatatgttggccgccgcatgtcagctactggtccaggtgctgttgaggt 104021 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 422 agctaccaagtggaaggaaagatcgacaggccatcatgttgagtatgaccagcgacctga 481 |||||| |||||||||||||| | ||||| || |||||| | ||||| |||||||| || Sbjct: 103048 agctacgaagtggaaggaaagtgcaacagggcaacatgttaaatatgatcagcgaccaga 102989 Query: 482 tattttcagg 491 | |||||||| Sbjct: 102988 tgttttcagg 102979 Score = 44.1 bits (22), Expect = 0.51 Identities = 67/82 (81%) Strand = Plus / Minus Query: 342 gatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagagaaaaaactg 401 ||||| ||||| || || ||||||||||| ||||||| || |||||||| || ||||| Sbjct: 103257 gatgtcaaaccagaaaacttcttgctagggactcctgggacacctgaagaaaagaaactc 103198 Query: 402 tttctcgtcgaccttggcttag 423 || || || || |||||||||| Sbjct: 103197 ttccttgttgatcttggcttag 103176
>ref|NM_188260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 119 bits (60), Expect = 1e-23 Identities = 224/276 (81%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 246 aattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctccata 305 ||||||||| | ||||| ||||||||||||||||| |||| ||| || || ||||||||| Sbjct: 505 aattcccactcgatgtctgttgagatggttgcttgtataggtatagaggccatctccata 564 Query: 306 cttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaatttcttg 365 || ||||| |||| | ||||| || ||||| || ||||||||||| ||||| || ||| Sbjct: 565 ctagagaagatgcatgctaaagggtacgtccatggtgatgtgaaacctgagaactttttg 624 Query: 366 ctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggcttagct 425 || || ||||| | |||||||||| ||| ||||| ||||| || || ||||| ||||| Sbjct: 625 cttggtcctccagatacccctgaagggaagaaactttttcttgttgatcttggactagct 684 Query: 426 accaagtggaaggaaagatcg-acaggccatcatgttgagtatgaccagcgacctgatat 484 || || ||||| | | | | | ||||| | |||||||| ||||||||| |||||||||| Sbjct: 685 actaaatggaaag-atgctggtacaggaaagcatgttgaatatgaccagagacctgatat 743 Query: 485 tttcaggggaacagttcgttatgctagtgttcatgc 520 || ||||| || ||||||||||||||||| ||||| Sbjct: 744 ctttaggggtactgttcgttatgctagtgtgcatgc 779
>dbj|AK103403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C13, full insert sequence Length = 2211 Score = 119 bits (60), Expect = 1e-23 Identities = 224/276 (81%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 246 aattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctccata 305 ||||||||| | ||||| ||||||||||||||||| |||| ||| || || ||||||||| Sbjct: 711 aattcccactcgatgtctgttgagatggttgcttgtataggtatagaggccatctccata 770 Query: 306 cttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaatttcttg 365 || ||||| |||| | ||||| || ||||| || ||||||||||| ||||| || ||| Sbjct: 771 ctagagaagatgcatgctaaagggtacgtccatggtgatgtgaaacctgagaactttttg 830 Query: 366 ctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggcttagct 425 || || ||||| | |||||||||| ||| ||||| ||||| || || ||||| ||||| Sbjct: 831 cttggtcctccagatacccctgaagggaagaaactttttcttgttgatcttggactagct 890 Query: 426 accaagtggaaggaaagatcg-acaggccatcatgttgagtatgaccagcgacctgatat 484 || || ||||| | | | | | ||||| | |||||||| ||||||||| |||||||||| Sbjct: 891 actaaatggaaag-atgctggtacaggaaagcatgttgaatatgaccagagacctgatat 949 Query: 485 tttcaggggaacagttcgttatgctagtgttcatgc 520 || ||||| || ||||||||||||||||| ||||| Sbjct: 950 ctttaggggtactgttcgttatgctagtgtgcatgc 985
>dbj|AK060271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E10, full insert sequence Length = 1581 Score = 119 bits (60), Expect = 1e-23 Identities = 224/276 (81%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 246 aattcccacacaatgtcagttgagatggttgcttgcatagctatcgaagctatctccata 305 ||||||||| | ||||| ||||||||||||||||| |||| ||| || || ||||||||| Sbjct: 102 aattcccactcgatgtctgttgagatggttgcttgtataggtatagaggccatctccata 161 Query: 306 cttgagaaagtgcactcaaaaggatatgtccacggggatgtgaaacccgagaatttcttg 365 || ||||| |||| | ||||| || ||||| || ||||||||||| ||||| || ||| Sbjct: 162 ctagagaagatgcatgctaaagggtacgtccatggtgatgtgaaacctgagaactttttg 221 Query: 366 ctaggacctcctggaacccctgaagagaaaaaactgtttctcgtcgaccttggcttagct 425 || || ||||| | |||||||||| ||| ||||| ||||| || || ||||| ||||| Sbjct: 222 cttggtcctccagatacccctgaagggaagaaactttttcttgttgatcttggactagct 281 Query: 426 accaagtggaaggaaagatcg-acaggccatcatgttgagtatgaccagcgacctgatat 484 || || ||||| | | | | | ||||| | |||||||| ||||||||| |||||||||| Sbjct: 282 actaaatggaaag-atgctggtacaggaaagcatgttgaatatgaccagagacctgatat 340 Query: 485 tttcaggggaacagttcgttatgctagtgttcatgc 520 || ||||| || ||||||||||||||||| ||||| Sbjct: 341 ctttaggggtactgttcgttatgctagtgtgcatgc 376
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 485 tttcaggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcag 544 ||||||||| |||||||| ||||||||||||||||||||||| ||||| || || ||| | Sbjct: 31106724 tttcagggggacagttcgctatgctagtgttcatgcacatctagggagaatcggtagccg 31106665 Query: 545 gagggatgacttagaatcactagcttatacactagtctttct 586 |||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 31106664 aagggatgatttagaatctctagcttacacactagtttttct 31106623 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 257 aatgtcagttgagatggttgcttgcatagctatcgaagctatctccatacttgagaaagt 316 |||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| | Sbjct: 31107606 aatgtctgttgagatggttgcgtgcatcgctattgaagctatctccatacttgagaaaat 31107547 Query: 317 gcactcaaaagg 328 ||| |||||||| Sbjct: 31107546 gcattcaaaagg 31107535 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 138 ggtggcattcatggggttcctcgagtccactacaaagggcgccaagg 184 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 31107891 ggtggcattcatggggttcctcgagtccactataaaggacgtcaagg 31107845 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 328 gatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctg 387 ||||||| || |||||||||||||| || |||||||||||||| ||| |||||| |||| Sbjct: 31107442 gatatgttcatggggatgtgaaacctgaaaatttcttgctagggcctattggaactcctg 31107383 Query: 388 aaga 391 |||| Sbjct: 31107382 aaga 31107379 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 258 atgtcagttgagatggttgcttgcatagctatcgaagctatctccatacttgagaa 313 ||||| ||||||||||||||||| |||| ||| || || ||||||||||| ||||| Sbjct: 5332220 atgtctgttgagatggttgcttgtataggtatagaggccatctccatactagagaa 5332165 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 459 gttgagtatgaccagcgacctgatattttcagg 491 ||||| |||||||||||||||||| |||||||| Sbjct: 31107194 gttgactatgaccagcgacctgatgttttcagg 31107162 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Minus Query: 5 ccaagtatacgttggccgccgcatttcagctaaagctccagg 46 ||||||||| |||||||||||||| | |||||| | |||||| Sbjct: 31108202 ccaagtatatgttggccgccgcatgttagctaacggtccagg 31108161 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Minus Query: 333 gtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagag 392 ||||| || ||||||||||| ||||| || ||||| || ||||| | |||||||||| | Sbjct: 5332058 gtccatggtgatgtgaaacctgagaactttttgcttggtcctccagatacccctgaaggg 5331999 Query: 393 aaaaaactgtttct 406 || ||||| ||||| Sbjct: 5331998 aagaaactttttct 5331985 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 488 caggggaacagttcgttatgctagtgttcatgc 520 |||||| || ||||||||||||||||| ||||| Sbjct: 5331718 caggggtactgttcgttatgctagtgtgcatgc 5331686 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atggccctccatatgagtgg 119 |||||||||||||||||||| Sbjct: 32611520 atggccctccatatgagtgg 32611539
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 485 tttcaggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcag 544 ||||||||| |||||||| ||||||||||||||||||||||| ||||| || || ||| | Sbjct: 163703 tttcagggggacagttcgctatgctagtgttcatgcacatctagggagaatcggtagccg 163644 Query: 545 gagggatgacttagaatcactagcttatacactagtctttct 586 |||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 163643 aagggatgatttagaatctctagcttacacactagtttttct 163602 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 257 aatgtcagttgagatggttgcttgcatagctatcgaagctatctccatacttgagaaagt 316 |||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| | Sbjct: 164585 aatgtctgttgagatggttgcgtgcatcgctattgaagctatctccatacttgagaaaat 164526 Query: 317 gcactcaaaagg 328 ||| |||||||| Sbjct: 164525 gcattcaaaagg 164514 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 138 ggtggcattcatggggttcctcgagtccactacaaagggcgccaagg 184 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 164870 ggtggcattcatggggttcctcgagtccactataaaggacgtcaagg 164824 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 328 gatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctg 387 ||||||| || |||||||||||||| || |||||||||||||| ||| |||||| |||| Sbjct: 164421 gatatgttcatggggatgtgaaacctgaaaatttcttgctagggcctattggaactcctg 164362 Query: 388 aaga 391 |||| Sbjct: 164361 aaga 164358 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 459 gttgagtatgaccagcgacctgatattttcagg 491 ||||| |||||||||||||||||| |||||||| Sbjct: 164173 gttgactatgaccagcgacctgatgttttcagg 164141 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Minus Query: 5 ccaagtatacgttggccgccgcatttcagctaaagctccagg 46 ||||||||| |||||||||||||| | |||||| | |||||| Sbjct: 165181 ccaagtatatgttggccgccgcatgttagctaacggtccagg 165140
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 485 tttcaggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcag 544 ||||||||| |||||||| ||||||||||||||||||||||| ||||| || || ||| | Sbjct: 33069 tttcagggggacagttcgctatgctagtgttcatgcacatctagggagaatcggtagccg 33010 Query: 545 gagggatgacttagaatcactagcttatacactagtctttct 586 |||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 33009 aagggatgatttagaatctctagcttacacactagtttttct 32968 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 257 aatgtcagttgagatggttgcttgcatagctatcgaagctatctccatacttgagaaagt 316 |||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| | Sbjct: 33951 aatgtctgttgagatggttgcgtgcatcgctattgaagctatctccatacttgagaaaat 33892 Query: 317 gcactcaaaagg 328 ||| |||||||| Sbjct: 33891 gcattcaaaagg 33880 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 138 ggtggcattcatggggttcctcgagtccactacaaagggcgccaagg 184 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 34236 ggtggcattcatggggttcctcgagtccactataaaggacgtcaagg 34190 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 328 gatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctg 387 ||||||| || |||||||||||||| || |||||||||||||| ||| |||||| |||| Sbjct: 33787 gatatgttcatggggatgtgaaacctgaaaatttcttgctagggcctattggaactcctg 33728 Query: 388 aaga 391 |||| Sbjct: 33727 aaga 33724 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 459 gttgagtatgaccagcgacctgatattttcagg 491 ||||| |||||||||||||||||| |||||||| Sbjct: 33539 gttgactatgaccagcgacctgatgttttcagg 33507 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Minus Query: 5 ccaagtatacgttggccgccgcatttcagctaaagctccagg 46 ||||||||| |||||||||||||| | |||||| | |||||| Sbjct: 34547 ccaagtatatgttggccgccgcatgttagctaacggtccagg 34506
>ref|NM_191171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 5 ccaagtatacgttggccgccgcatttcagctaaagctccaggcgcagttgaggtggcgtt 64 ||||||||| |||||||||||||| | |||||| | |||||| || |||||||||| | Sbjct: 369 ccaagtatatgttggccgccgcatgttagctaacggtccaggtgcttctgaggtggcgct 428 Query: 65 aaagtttgagcataaggacagcaaaggatgtagccatggccctccatatgagtggaaggt 124 ||||||||| |||| ||| |||||||| | |||||| ||||| || || ||| |||| Sbjct: 429 aaagtttgaacatagaaccagtaaaggatgcaaccatgggcctccttacgaatggcaggt 488 Query: 125 ttacgatatccttggtggcattcatggggttcctcgagtccactacaaagggcgccaagg 184 |||| | | | |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 489 ttacaacgccatcggtggcattcatggggttcctcgagtccactataaaggacgtcaagg 548 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 459 gttgagtatgaccagcgacctgatattttcaggg 492 ||||| |||||||||||||||||| ||||||||| Sbjct: 688 gttgactatgaccagcgacctgatgttttcaggg 721
>ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.1 mRNA, complete cds Length = 2604 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagtgtt 515 |||||||| ||||||||||| |||||| |||| || |||||||| |||||||||||||| Sbjct: 1098 catgttgaatatgaccagcgtcctgatgtttttagaggaacagtacgttatgctagtgta 1157 Query: 516 catgcacatcttgg 529 ||||| |||||||| Sbjct: 1158 catgctcatcttgg 1171 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 326 aggatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccc 385 ||||||||| || || ||||| ||||| |||||||| |||| || ||||||||||| || Sbjct: 968 aggatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcctcctggaactcc 1027 Query: 386 tgaagagaaaaaactgtttctcgtcgaccttggcttagc 424 ||||||||||||||| || || || ||||| |||||||| Sbjct: 1028 tgaagagaaaaaacttttccttgtagacctcggcttagc 1066 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 54 gaggtggcgttaaagtttgagcataaggacagcaaaggatgtagccatggccctccatat 113 |||||||| || ||||||||||||| |||||||||||||| | |||| || || ||| Sbjct: 696 gaggtggctttgaagtttgagcatagaaccagcaaaggatgtaactatgggccaccgtat 755 Query: 114 gagtggaaggtttacgatatccttggtggcattcatgg 151 |||||| | |||||| || |||||||||| |||||| Sbjct: 756 gagtggcaagtttacaatgcacttggtggcagtcatgg 793
>ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.2 mRNA, complete cds Length = 2613 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagtgtt 515 |||||||| ||||||||||| |||||| |||| || |||||||| |||||||||||||| Sbjct: 1098 catgttgaatatgaccagcgtcctgatgtttttagaggaacagtacgttatgctagtgta 1157 Query: 516 catgcacatcttgg 529 ||||| |||||||| Sbjct: 1158 catgctcatcttgg 1171 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 326 aggatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccc 385 ||||||||| || || ||||| ||||| |||||||| |||| || ||||||||||| || Sbjct: 968 aggatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcctcctggaactcc 1027 Query: 386 tgaagagaaaaaactgtttctcgtcgaccttggcttagc 424 ||||||||||||||| || || || ||||| |||||||| Sbjct: 1028 tgaagagaaaaaacttttccttgtagacctcggcttagc 1066 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 54 gaggtggcgttaaagtttgagcataaggacagcaaaggatgtagccatggccctccatat 113 |||||||| || ||||||||||||| |||||||||||||| | |||| || || ||| Sbjct: 696 gaggtggctttgaagtttgagcatagaaccagcaaaggatgtaactatgggccaccgtat 755 Query: 114 gagtggaaggtttacgatatccttggtggcattcatgg 151 |||||| | |||||| || |||||||||| |||||| Sbjct: 756 gagtggcaagtttacaatgcacttggtggcagtcatgg 793
>gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence Length = 2695 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagtgtt 515 |||||||| ||||||||||| |||||| |||| || |||||||| |||||||||||||| Sbjct: 1248 catgttgaatatgaccagcgtcctgatgtttttagaggaacagtacgttatgctagtgta 1307 Query: 516 catgcacatcttgg 529 ||||| |||||||| Sbjct: 1308 catgctcatcttgg 1321 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 326 aggatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccc 385 ||||||||| || || ||||| ||||| |||||||| |||| || ||||||||||| || Sbjct: 1118 aggatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcctcctggaactcc 1177 Query: 386 tgaagagaaaaaactgtttctcgtcgaccttggcttagc 424 ||||||||||||||| || || || ||||| |||||||| Sbjct: 1178 tgaagagaaaaaacttttccttgtagacctcggcttagc 1216 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 54 gaggtggcgttaaagtttgagcataaggacagcaaaggatgtagccatggccctccatat 113 |||||||| || ||||||||||||| |||||||||||||| | |||| || || ||| Sbjct: 696 gaggtggctttgaagtttgagcatagaaccagcaaaggatgtaactatgggccaccgtat 755 Query: 114 gagtggaaggtttacgatatccttggtggcattcatgg 151 |||||| | |||||| || |||||||||| |||||| Sbjct: 756 gagtggcaagtttacaatgcacttggtggcagtcatgg 793
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 488 caggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcaggag 547 |||||| |||||||| ||||||||||| ||||| |||||||| || | ||| |||||||| Sbjct: 35618 caggggcacagttcgatatgctagtgtgcatgctcatcttggtagaacaggtagcaggag 35677 Query: 548 ggatgacttagaatcactagcttatacactagtctt 583 |||||||||||||| || || || ||||| ||||| Sbjct: 35678 agatgacttagaatctcttgcatacacacttgtctt 35713
>gb|AC159534.11| Medicago truncatula clone mth2-81a23, complete sequence Length = 120504 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 488 caggggaacagttcgttatgctagtgttcatgcacatcttgggaggataggcagcaggag 547 ||||||||||||||||||||||||||| ||||| |||||||| |||| ||| ||||| || Sbjct: 68173 caggggaacagttcgttatgctagtgtacatgctcatcttggtaggacaggtagcagaag 68232 Query: 548 ggatgacttagaatc 562 ||||| || ||||| Sbjct: 68233 agatgatttggaatc 68247 Score = 44.1 bits (22), Expect = 0.51 Identities = 67/82 (81%) Strand = Plus / Plus Query: 342 gatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagagaaaaaactg 401 ||||| ||||| ||||| || ||||| || ||||| ||||| | |||||||||||| || Sbjct: 67826 gatgtaaaacctgagaactttttgctcggccctccgggaactcatgaagagaaaaagctt 67885 Query: 402 tttctcgtcgaccttggcttag 423 ||||| || || ||||| |||| Sbjct: 67886 tttctggttgatcttggtttag 67907
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 328 gatatgtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctg 387 ||||||| || || ||||| ||||| |||||||| |||| || ||||||||||| |||| Sbjct: 88704 gatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcctcctggaactcctg 88763 Query: 388 aagagaaaaaactgtttctcgtcgaccttggcttag 423 ||||||||||||| || || || ||||| ||||||| Sbjct: 88764 aagagaaaaaacttttccttgtagacctcggcttag 88799 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 483 attttcaggggaacagttcgttatgctagtgttcatgcacatcttgg 529 |||||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 89035 attttcagaggaacagtacgttatgctagtgtacatgctcatcttgg 89081 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 55 aggtggcgttaaagtttgagcataaggacagcaaaggatgtagccatggccctccatatg 114 ||||||| || ||||||||||||| |||||||||||||| | |||| || || |||| Sbjct: 88008 aggtggctttgaagtttgagcatagaaccagcaaaggatgtaactatgggccaccgtatg 88067 Query: 115 agtggaaggtttac 128 ||||| | |||||| Sbjct: 88068 agtggcaagtttac 88081 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatatttt 487 |||||||| ||||||||||| |||||| |||| Sbjct: 88909 catgttgaatatgaccagcgtcctgatgtttt 88940
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 342 gatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagagaaaaaactg 401 ||||| ||||| |||||||| ||||| ||| | || ||||||| |||||||||||||| Sbjct: 142913 gatgtaaaacctgagaattttttgcttggaaccccaggaaccctggaagagaaaaaactt 142854 Query: 402 tttctcgtcgaccttggcttag 423 ||||| || |||||||| |||| Sbjct: 142853 tttcttgttgaccttggattag 142832 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 257 aatgtcagttgagatggttgcttgcatagctatcgaagctatctccata 305 |||||| ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct: 143094 aatgtctgttgaaatggttgcttgtattgctatagaagcaatctccata 143046 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 489 aggggaacagttcgttatgctagtgttcatgc 520 |||||||| ||||| ||||||||||| ||||| Sbjct: 142599 aggggaactgttcgctatgctagtgtgcatgc 142568
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 342 gatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagagaaaaaactg 401 ||||| ||||| |||||||| ||||| ||| | || ||||||| |||||||||||||| Sbjct: 25699 gatgtaaaacctgagaattttttgcttggaaccccaggaaccctggaagagaaaaaactt 25640 Query: 402 tttctcgtcgaccttggcttag 423 ||||| || |||||||| |||| Sbjct: 25639 tttcttgttgaccttggattag 25618 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 257 aatgtcagttgagatggttgcttgcatagctatcgaagctatctccata 305 |||||| ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct: 25880 aatgtctgttgaaatggttgcttgtattgctatagaagcaatctccata 25832 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 489 aggggaacagttcgttatgctagtgttcatgc 520 |||||||| ||||| ||||||||||| ||||| Sbjct: 25385 aggggaactgttcgctatgctagtgtgcatgc 25354
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 342 gatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagagaaaaaactg 401 ||||| ||||| |||||||| ||||| ||| | || ||||||| |||||||||||||| Sbjct: 6195344 gatgtaaaacctgagaattttttgcttggaaccccaggaaccctggaagagaaaaaactt 6195285 Query: 402 tttctcgtcgaccttggcttag 423 ||||| || |||||||| |||| Sbjct: 6195284 tttcttgttgaccttggattag 6195263 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 257 aatgtcagttgagatggttgcttgcatagctatcgaagctatctccata 305 |||||| ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct: 6195525 aatgtctgttgaaatggttgcttgtattgctatagaagcaatctccata 6195477 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 489 aggggaacagttcgttatgctagtgttcatgc 520 |||||||| ||||| ||||||||||| ||||| Sbjct: 6195030 aggggaactgttcgctatgctagtgtgcatgc 6194999
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 258 atgtcagttgagatggttgcttgcatagctatcgaagctatctccatacttgagaa 313 ||||| ||||||||||||||||| |||| ||| || || ||||||||||| ||||| Sbjct: 83564 atgtctgttgagatggttgcttgtataggtatagaggccatctccatactagagaa 83509 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Minus Query: 333 gtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagag 392 ||||| || ||||||||||| ||||| || ||||| || ||||| | |||||||||| | Sbjct: 83402 gtccatggtgatgtgaaacctgagaactttttgcttggtcctccagatacccctgaaggg 83343 Query: 393 aaaaaactgtttct 406 || ||||| ||||| Sbjct: 83342 aagaaactttttct 83329 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 488 caggggaacagttcgttatgctagtgttcatgc 520 |||||| || ||||||||||||||||| ||||| Sbjct: 83062 caggggtactgttcgttatgctagtgtgcatgc 83030
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 258 atgtcagttgagatggttgcttgcatagctatcgaagctatctccatacttgagaa 313 ||||| ||||||||||||||||| |||| ||| || || ||||||||||| ||||| Sbjct: 127471 atgtctgttgagatggttgcttgtataggtatagaggccatctccatactagagaa 127416 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Minus Query: 333 gtccacggggatgtgaaacccgagaatttcttgctaggacctcctggaacccctgaagag 392 ||||| || ||||||||||| ||||| || ||||| || ||||| | |||||||||| | Sbjct: 127309 gtccatggtgatgtgaaacctgagaactttttgcttggtcctccagatacccctgaaggg 127250 Query: 393 aaaaaactgtttct 406 || ||||| ||||| Sbjct: 127249 aagaaactttttct 127236 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 488 caggggaacagttcgttatgctagtgttcatgc 520 |||||| || ||||||||||||||||| ||||| Sbjct: 126969 caggggtactgttcgttatgctagtgtgcatgc 126937
>ref|XM_469960.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2723 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 87 aaaggatgtagccatggccctccatatgagtggaaggtttac 128 |||||||||| | ||||||||||||| |||||| |||||||| Sbjct: 811 aaaggatgtaactatggccctccatacgagtggcaggtttac 852 Score = 44.1 bits (22), Expect = 0.51 Identities = 79/98 (80%) Strand = Plus / Plus Query: 270 atggttgcttgcatagctatcgaagctatctccatacttgagaaagtgcactcaaaagga 329 |||||||||||||| ||| | ||||| || || || |||||||| | ||||| ||||| Sbjct: 994 atggttgcttgcattgctgtggaagcgatatcaattcttgagaagcttcactctaaaggg 1053 Query: 330 tatgtccacggggatgtgaaacccgagaatttcttgct 367 | ||| || || ||||| ||||| |||||||| ||||| Sbjct: 1054 tttgtacatggtgatgtcaaaccagagaattttttgct 1091 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 540 agcaggagggatgacttagaatcactagcttatacactagtcttt 584 |||||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct: 1264 agcaggagggatgatttagagtcactggcttacaccctaatcttt 1308
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 87 aaaggatgtagccatggccctccatatgagtggaaggtttac 128 |||||||||| | ||||||||||||| |||||| |||||||| Sbjct: 46082 aaaggatgtaactatggccctccatacgagtggcaggtttac 46041 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 540 agcaggagggatgacttagaatcactagcttatacactagtcttt 584 |||||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct: 45009 agcaggagggatgatttagagtcactggcttacaccctaatcttt 44965
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 87 aaaggatgtagccatggccctccatatgagtggaaggtttac 128 |||||||||| | ||||||||||||| |||||| |||||||| Sbjct: 32697825 aaaggatgtaactatggccctccatacgagtggcaggtttac 32697866 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 540 agcaggagggatgacttagaatcactagcttatacactagtcttt 584 |||||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct: 32698898 agcaggagggatgatttagagtcactggcttacaccctaatcttt 32698942
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 87 aaaggatgtagccatggccctccatatgagtggaaggtttac 128 |||||||||| | ||||||||||||| |||||| |||||||| Sbjct: 32788335 aaaggatgtaactatggccctccatacgagtggcaggtttac 32788376 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 540 agcaggagggatgacttagaatcactagcttatacactagtcttt 584 |||||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct: 32789408 agcaggagggatgatttagagtcactggcttacaccctaatcttt 32789452
>dbj|AK121620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P16, full insert sequence Length = 2724 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 87 aaaggatgtagccatggccctccatatgagtggaaggtttac 128 |||||||||| | ||||||||||||| |||||| |||||||| Sbjct: 812 aaaggatgtaactatggccctccatacgagtggcaggtttac 853 Score = 44.1 bits (22), Expect = 0.51 Identities = 79/98 (80%) Strand = Plus / Plus Query: 270 atggttgcttgcatagctatcgaagctatctccatacttgagaaagtgcactcaaaagga 329 |||||||||||||| ||| | ||||| || || || |||||||| | ||||| ||||| Sbjct: 995 atggttgcttgcattgctgtggaagcgatatcaattcttgagaagcttcactctaaaggg 1054 Query: 330 tatgtccacggggatgtgaaacccgagaatttcttgct 367 | ||| || || ||||| ||||| |||||||| ||||| Sbjct: 1055 tttgtacatggtgatgtcaaaccagagaattttttgct 1092 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 540 agcaggagggatgacttagaatcactagcttatacactagtcttt 584 |||||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct: 1265 agcaggagggatgatttagagtcactggcttacaccctaatcttt 1309
>dbj|AK103407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D14, full insert sequence Length = 2424 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 87 aaaggatgtagccatggccctccatatgagtggaaggtttac 128 |||||||||| | ||||||||||||| |||||| |||||||| Sbjct: 759 aaaggatgtaactatggccctccatacgagtggcaggtttac 800 Score = 44.1 bits (22), Expect = 0.51 Identities = 79/98 (80%) Strand = Plus / Plus Query: 270 atggttgcttgcatagctatcgaagctatctccatacttgagaaagtgcactcaaaagga 329 |||||||||||||| ||| | ||||| || || || |||||||| | ||||| ||||| Sbjct: 942 atggttgcttgcattgctgtggaagcgatatcaattcttgagaagcttcactctaaaggg 1001 Query: 330 tatgtccacggggatgtgaaacccgagaatttcttgct 367 | ||| || || ||||| ||||| |||||||| ||||| Sbjct: 1002 tttgtacatggtgatgtcaaaccagagaattttttgct 1039 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 540 agcaggagggatgacttagaatcactagcttatacactagtcttt 584 |||||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct: 1212 agcaggagggatgatttagagtcactggcttacaccctaatcttt 1256
>gb|BT024085.1| Zea mays clone EL01N0553E07 mRNA sequence Length = 2607 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 453 catcatgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagt 512 ||||||||||| ||||| || || |||||||| || ||||||||| || | ||||| ||| Sbjct: 1141 catcatgttgattatgatcaacggcctgatatctttaggggaacaattagatatgcgagt 1200 Query: 513 gttcatgcacatcttgggaggataggcagcaggagggatgacttagaatcact 565 || ||||| ||| | ||| | | || || ||||||||||| ||||| ||||| Sbjct: 1201 gtccatgctcatttggggcgcactggtagtaggagggatgatttagagtcact 1253
>gb|AY105933.1| Zea mays PCO139662 mRNA sequence Length = 1157 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 453 catcatgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatgctagt 512 ||||||||||| ||||| || || |||||||| || ||||||||| || | ||||| ||| Sbjct: 490 catcatgttgattatgatcaacggcctgatatctttaggggaacaattagatatgcgagt 549 Query: 513 gttcatgcacatcttgggaggataggcagcaggagggatgacttagaatcact 565 || ||||| ||| | ||| | | || || ||||||||||| ||||| ||||| Sbjct: 550 gtccatgctcatttggggcgcactggtagtaggagggatgatttagagtcact 602 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 100 atggccctccatatgagtggaaggttta 127 |||||||||||||||||||| ||||||| Sbjct: 140 atggccctccatatgagtggcaggttta 167
>ref|NM_121824.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT5G18190 mRNA, complete cds Length = 2324 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Plus Query: 448 caggccatcatgttgagtatgaccagcgacctgatattttcaggggaacagttcgttatg 507 ||||||| |||||||| ||||| || |||||||| | ||||||||||| | | |||| Sbjct: 881 caggccagcatgttgaatatgatcaaagacctgatgtgttcaggggaacgataaggtatg 940 Query: 508 ctagtgttcatgcaca 523 | |||||||||||||| Sbjct: 941 caagtgttcatgcaca 956
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence Length = 105353 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 456 catgttgagtatgaccagcgacctgatattttcagg 491 |||||||| ||||||||||| |||||||| |||||| Sbjct: 11278 catgttgaatatgaccagcgccctgatatgttcagg 11243
>gb|AC146752.24| Medicago truncatula clone mth2-62d4, complete sequence Length = 130134 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 456 catgttgagtatgaccagcgacctgatattttcagg 491 |||||||| ||||||||||| |||||||| |||||| Sbjct: 1079 catgttgaatatgaccagcgccctgatatgttcagg 1114
>ref|NM_112214.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT3G13670 mRNA, complete cds Length = 2779 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 64 taaagtttgagcataaggacagcaaaggatgtagccatggccctccatatgagtggaagg 123 ||||||||||||||| | |||||| || || | | |||| |||||| |||||||| ||| Sbjct: 733 taaagtttgagcataggagcagcaagggttgcaactatggtcctccacatgagtggcagg 792 Query: 124 tttac 128 ||||| Sbjct: 793 tttac 797
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 agttgagatggttgcttgcat 283 ||||||||||||||||||||| Sbjct: 314 agttgagatggttgcttgcat 294
>gb|AC069286.7| Homo sapiens BAC clone RP11-261N10 from 7, complete sequence Length = 157118 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 agttgagatggttgcttgcat 283 ||||||||||||||||||||| Sbjct: 133592 agttgagatggttgcttgcat 133572
>gb|AY117204.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2143 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 64 taaagtttgagcataaggacagcaaaggatgtagccatggccctccatatgagtggaagg 123 ||||||||||||||| | |||||| || || | | |||| |||||| |||||||| ||| Sbjct: 521 taaagtttgagcataggagcagcaagggttgcaactatggtcctccacatgagtggcagg 580 Query: 124 tttac 128 ||||| Sbjct: 581 tttac 585
>gb|AY080703.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2653 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 64 taaagtttgagcataaggacagcaaaggatgtagccatggccctccatatgagtggaagg 123 ||||||||||||||| | |||||| || || | | |||| |||||| |||||||| ||| Sbjct: 733 taaagtttgagcataggagcagcaagggttgcaactatggtcctccacatgagtggcagg 792 Query: 124 tttac 128 ||||| Sbjct: 793 tttac 797
>gb|AC093240.2| Homo sapiens chromosome 5 clone RP11-103P4, complete sequence Length = 163673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ggaacccctgaagagaaaaaa 398 ||||||||||||||||||||| Sbjct: 158941 ggaacccctgaagagaaaaaa 158921
>gb|AC010389.8| Homo sapiens chromosome 5 clone CTD-2077I5, complete sequence Length = 134060 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ggaacccctgaagagaaaaaa 398 ||||||||||||||||||||| Sbjct: 73788 ggaacccctgaagagaaaaaa 73768
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 64 taaagtttgagcataaggacagcaaaggatgtagccatggccctccatatgagtggaagg 123 ||||||||||||||| | |||||| || || | | |||| |||||| |||||||| ||| Sbjct: 15021 taaagtttgagcataggagcagcaagggttgcaactatggtcctccacatgagtggcagg 15080 Query: 124 tttac 128 ||||| Sbjct: 15081 tttac 15085
>emb|AL807401.11| Mouse DNA sequence from clone RP23-133C12 on chromosome X, complete sequence Length = 110261 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 ttcgttatgctagtgttcatg 519 ||||||||||||||||||||| Sbjct: 38506 ttcgttatgctagtgttcatg 38486
>ref|NM_191434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2097 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atggccctccatatgagtgg 119 |||||||||||||||||||| Sbjct: 557 atggccctccatatgagtgg 576
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccctgaagagaaaaaactgt 402 |||||||||||||||||||| Sbjct: 170270 ccctgaagagaaaaaactgt 170251
>gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete sequence Length = 115210 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggatgcatgttgtaataatt 249 |||||||||||||||||||| Sbjct: 37813 ggatgcatgttgtaataatt 37832
>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence Length = 121952 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ggatgcatgttgtaataatt 249 |||||||||||||||||||| Sbjct: 45349 ggatgcatgttgtaataatt 45330
>emb|Z73560.1|SCYPL204W S.cerevisiae chromosome XVI reading frame ORF YPL204w Length = 1989 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 gatgacttagaatcactagcttat 572 ||||||||||||||||||| |||| Sbjct: 589 gatgacttagaatcactaggttat 612
>gb|AC109635.6| Homo sapiens chromosome 11, clone RP11-347H15, complete sequence Length = 167920 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 atttcagctaaagctccagg 46 |||||||||||||||||||| Sbjct: 107152 atttcagctaaagctccagg 107171
>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete sequence Length = 158069 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 aggacctcctggaacccctg 387 |||||||||||||||||||| Sbjct: 117782 aggacctcctggaacccctg 117763
>gb|AC080079.5| Homo sapiens BAC clone RP11-511B7 from 4, complete sequence Length = 112516 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctcaaaaggatatgtccacg 339 |||||||||||||||||||| Sbjct: 38615 ctcaaaaggatatgtccacg 38634
>ref|XM_685764.1| PREDICTED: Danio rerio similar to CG32045-PC, isoform C (LOC562380), mRNA Length = 4344 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 aagctccaggcgcagttgaggtgg 60 ||||||||||||||| |||||||| Sbjct: 1525 aagctccaggcgcagctgaggtgg 1548
>emb|BX548044.10| Zebrafish DNA sequence from clone DKEY-10B15 in linkage group 10, complete sequence Length = 250011 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 aagctccaggcgcagttgaggtgg 60 ||||||||||||||| |||||||| Sbjct: 244760 aagctccaggcgcagctgaggtgg 244737
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atggccctccatatgagtgg 119 |||||||||||||||||||| Sbjct: 74315 atggccctccatatgagtgg 74334
>gb|AC148028.2| Homo sapiens chromosome UNKNOWN clone RP11-238G20, complete sequence Length = 172857 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 aggacctcctggaacccctg 387 |||||||||||||||||||| Sbjct: 6151 aggacctcctggaacccctg 6170
>dbj|AK120893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029O03, full insert sequence Length = 2788 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atggccctccatatgagtgg 119 |||||||||||||||||||| Sbjct: 726 atggccctccatatgagtgg 745
>dbj|AK069612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A22, full insert sequence Length = 2851 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atggccctccatatgagtgg 119 |||||||||||||||||||| Sbjct: 800 atggccctccatatgagtgg 819
>gb|DQ333095.1| Synthetic construct Saccharomyces cerevisiae clone FLH114041.01X HRR25 gene, complete sequence Length = 1485 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 gatgacttagaatcactagcttat 572 ||||||||||||||||||| |||| Sbjct: 580 gatgacttagaatcactaggttat 603
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ccctgaagagaaaaaactgt 402 |||||||||||||||||||| Sbjct: 139954 ccctgaagagaaaaaactgt 139973
>gb|M68605.1|YSCHRR25A Saccharomyces cerevisiae protein kinase (HRR25) gene, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 gatgacttagaatcactagcttat 572 ||||||||||||||||||| |||| Sbjct: 580 gatgacttagaatcactaggttat 603 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,470,924 Number of Sequences: 3902068 Number of extensions: 4470924 Number of successful extensions: 74821 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74530 Number of HSP's gapped (non-prelim): 281 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
