ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1... 32 1.8
2S230_PLAFO (P68875) Transmission-blocking target antigen S230 pr... 30 4.0
3S230_PLAF7 (P68874) Transmission-blocking target antigen S230 pr... 30 4.0
4REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein) 30 5.2
5Y1265_HAEIN (P44144) Hypothetical UPF0142 protein HI1265 30 6.8

>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1424

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/84 (27%), Positives = 37/84 (44%)
 Frame = +2

Query: 20  TEGIAGDVWQHLKTGPSITDAAMGRIAQISKVKAEGGYDKIFQQTFECLPDEKLKKAYAC 199
           TE +  D  +HL +   IT++                 ++ FQ+ F    +E+L  +Y C
Sbjct: 773 TERLGDDDDKHLASAEEITES-----------------NERFQKRFALGTEERLIASYHC 815

Query: 200 YLSTSHGPIMGVLYVSTAKLAFCS 271
           +L     P  G +YVST  + F S
Sbjct: 816 HLHRGGIPTYGKMYVSTNYVTFRS 839



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>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +2

Query: 107 SKVKAEGGYDKIFQQTFECLPDEKLKKAYACYLSTSHGPIMGVLYVSTAKLAFCSDSPVA 286
           ++++ +   +KI  +TF      K    Y CY+    G I G+L+    K   C +  + 
Sbjct: 751 NQIEEDEHNEKIKMKTFFTQNIYKKNNIYPCYMKLYSGDIGGILFPKNIKSTTCFEEMIP 810

Query: 287 YVTE 298
           Y  E
Sbjct: 811 YNKE 814



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>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +2

Query: 107 SKVKAEGGYDKIFQQTFECLPDEKLKKAYACYLSTSHGPIMGVLYVSTAKLAFCSDSPVA 286
           ++++ +   +KI  +TF      K    Y CY+    G I G+L+    K   C +  + 
Sbjct: 751 NQIEEDEHNEKIKMKTFFTQNIYKKNNIYPCYMKLYSGDIGGILFPKNIKSTTCFEEMIP 810

Query: 287 YVTE 298
           Y  E
Sbjct: 811 YNKE 814



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>REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein)|
          Length = 619

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
 Frame = -3

Query: 256 LGGRDVQDAHYRAMRGREVACVGLLELLVRQALKRLLKYLVVSTFRFDLG-------YLS 98
           L G+D +D +Y A  G+E   +    L +R   K+ +K  +++  +  +         L+
Sbjct: 79  LVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLN 138

Query: 97  DPPHCSIRNARPGFQV-LPDVAGDALGXCP 11
           D   C +   R  FQV LPD  G+     P
Sbjct: 139 DIEDCDLNVVRLCFQVFLPDEHGNLTTALP 168



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>Y1265_HAEIN (P44144) Hypothetical UPF0142 protein HI1265|
          Length = 587

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
 Frame = -3

Query: 478 ETLHSAVVVDEAHEPEVMVINRNYLDVPLCRILLTSGRGD*SQMRYRYNYLV--NGGLG- 308
           E  ++ + +  A E EV V++ N+LDV  CRI++  G  D     Y  + L+  N  +G 
Sbjct: 355 EEYNNLMAIFRADEKEVYVMDYNHLDVYACRIIV-PGMSD----IYPADDLIYANNNMGM 409

Query: 307 -----LIILSDICHGAVTTK---SKLGGRDVQDA 230
                L+ L +  H A T +    +L G+D+ DA
Sbjct: 410 DWREILLDLPNWHHDAETYQELLEELDGQDIDDA 443


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,228,665
Number of Sequences: 219361
Number of extensions: 1787889
Number of successful extensions: 4699
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4698
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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