| Clone Name | bags37j15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124A01, full insert sequence Length = 3353 Score = 176 bits (89), Expect = 6e-41 Identities = 191/225 (84%) Strand = Plus / Plus Query: 283 cagaccgtatctttgcacaggatttgacatctaccttgtttgggaaccatgcacgatgtg 342 |||||| || ||||| |||||||||||||| ||||| || |||||||| ||| | ||||| Sbjct: 2981 cagaccatacctttgtacaggatttgacatttacctagtctgggaaccttgctcaatgtg 3040 Query: 343 tgctatggcgcttgtacatcaaaggttcaagcgcgtcttctatgctttccctaatcccgt 402 ||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||||| | Sbjct: 3041 tgcgatggcacttgtacatcaaagattcaaacgtatcttctatgctttcccaaatccaat 3100 Query: 403 aactggagcactaggtagtgtctacagattgcacgggaagaaaagcttgaatcaccatta 462 ||||||||||| || ||||||||||||||||||||| ||||||| || ||||| | ||| Sbjct: 3101 tactggagcactgggcagtgtctacagattgcacggggagaaaagtttaaatcatcgtta 3160 Query: 463 ctccgtgtttaggataaaagttcctgaggcatatttgaatggttc 507 ||| || |||||| ||||||| || ||| |||||| |||| |||| Sbjct: 3161 ctctgtatttagggtaaaagtgcccgagtcatattcgaatagttc 3205 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 27 agcagaagacactgccgtctgaaggtggttttctctggcatcctctgtggcatgctgcag 86 |||||||| || |||| | |||||||||||||| ||||| |||||| | |||||||| Sbjct: 2731 agcagaagtcattgccctgtgaaggtggttttccatggcaccctctgagacatgctgcca 2790 Query: 87 tagttgccattgaaaatgccgccgagagggatagaatgacgttccct 133 ||||||| ||||||||||| || |||||||||| | ||| ||||||| Sbjct: 2791 tagttgcgattgaaaatgctgcggagagggataaagtgatgttccct 2837
>dbj|AK066410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067M21, full insert sequence Length = 1582 Score = 176 bits (89), Expect = 6e-41 Identities = 191/225 (84%) Strand = Plus / Plus Query: 283 cagaccgtatctttgcacaggatttgacatctaccttgtttgggaaccatgcacgatgtg 342 |||||| || ||||| |||||||||||||| ||||| || |||||||| ||| | ||||| Sbjct: 1184 cagaccatacctttgtacaggatttgacatttacctagtctgggaaccttgctcaatgtg 1243 Query: 343 tgctatggcgcttgtacatcaaaggttcaagcgcgtcttctatgctttccctaatcccgt 402 ||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||||| | Sbjct: 1244 tgcgatggcacttgtacatcaaagattcaaacgtatcttctatgctttcccaaatccaat 1303 Query: 403 aactggagcactaggtagtgtctacagattgcacgggaagaaaagcttgaatcaccatta 462 ||||||||||| || ||||||||||||||||||||| ||||||| || ||||| | ||| Sbjct: 1304 tactggagcactgggcagtgtctacagattgcacggggagaaaagtttaaatcatcgtta 1363 Query: 463 ctccgtgtttaggataaaagttcctgaggcatatttgaatggttc 507 ||| || |||||| ||||||| || ||| |||||| |||| |||| Sbjct: 1364 ctctgtatttagggtaaaagtgcccgagtcatattcgaatagttc 1408 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 27 agcagaagacactgccgtctgaaggtggttttctctggcatcctctgtggcatgctgcag 86 |||||||| || |||| | |||||||||||||| ||||| |||||| | |||||||| Sbjct: 934 agcagaagtcattgccctgtgaaggtggttttccatggcaccctctgagacatgctgcca 993 Query: 87 tagttgccattgaaaatgccgccgagagggatagaatgacgttccct 133 ||||||| ||||||||||| || |||||||||| | ||| ||||||| Sbjct: 994 tagttgcgattgaaaatgctgcggagagggataaagtgatgttccct 1040
>dbj|AK061636.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A10, full insert sequence Length = 1222 Score = 161 bits (81), Expect = 4e-36 Identities = 190/225 (84%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 283 cagaccgtatctttgcacaggatttgacatctaccttgtttgggaaccatgcacgatgtg 342 |||||| || ||||| |||||||||||||| ||||| || |||||||| ||| | ||||| Sbjct: 728 cagaccatacctttgtacaggatttgacatttacctagtctgggaaccttgctcaatgtg 787 Query: 343 tgctatggcgcttgtacatcaaaggttcaagcgcgtcttctatgctttccctaatcccgt 402 ||| ||||| |||||||||||||| ||||| || ||||||||||||||| ||||| | Sbjct: 788 tgcgatggcacttgtacatcaaagattcaaacgta-cttctatgctttcccaaatccaat 846 Query: 403 aactggagcactaggtagtgtctacagattgcacgggaagaaaagcttgaatcaccatta 462 ||||||||||| || ||||||||||||||||||||| ||||||| || ||||| | ||| Sbjct: 847 tactggagcactgggcagtgtctacagattgcacggggagaaaagtttaaatcatcgtta 906 Query: 463 ctccgtgtttaggataaaagttcctgaggcatatttgaatggttc 507 ||| || |||||| ||||||| || ||| |||||| |||| |||| Sbjct: 907 ctctgtatttagggtaaaagtgcccgagtcatattcgaatagttc 951 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 27 agcagaagacactgccgtctgaaggtggttttctctggcatcctctgtggcatgctgcag 86 |||||||| || |||| | |||||||||||||| ||||| |||||| | |||||||| Sbjct: 478 agcagaagtcattgccctgtgaaggtggttttccatggcaccctctgagacatgctgcca 537 Query: 87 tagttgccattgaaaatgccgccgagagggatagaatgacgttccct 133 ||||||| ||||||||||| || |||||||||| | ||| ||||||| Sbjct: 538 tagttgcgattgaaaatgctgcggagagggataaagtgatgttccct 584
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 135 bits (68), Expect = 2e-28 Identities = 143/168 (85%) Strand = Plus / Minus Query: 340 gtgtgctatggcgcttgtacatcaaaggttcaagcgcgtcttctatgctttccctaatcc 399 |||||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||||| Sbjct: 2159315 gtgtgcgatggcacttgtacatcaaagattcaaacgtatcttctatgctttcccaaatcc 2159256 Query: 400 cgtaactggagcactaggtagtgtctacagattgcacgggaagaaaagcttgaatcacca 459 | ||||||||||| || ||||||||||||||||||||| ||||||| || ||||| | Sbjct: 2159255 aattactggagcactgggcagtgtctacagattgcacggggagaaaagtttaaatcatcg 2159196 Query: 460 ttactccgtgtttaggataaaagttcctgaggcatatttgaatggttc 507 |||||| || |||||| ||||||| || ||| |||||| |||| |||| Sbjct: 2159195 ttactctgtatttagggtaaaagtgcccgagtcatattcgaatagttc 2159148 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 27 agcagaagacactgccgtctgaaggtggttttctctggcatcctctgtggcatgctgcag 86 |||||||| || |||| | |||||||||||||| ||||| |||||| | |||||||| Sbjct: 2159793 agcagaagtcattgccctgtgaaggtggttttccatggcaccctctgagacatgctgcca 2159734 Query: 87 tagttgccattgaaaatgccgccgagagggatagaatgacgttccct 133 ||||||| ||||||||||| || |||||||||| | ||| ||||||| Sbjct: 2159733 tagttgcgattgaaaatgctgcggagagggataaagtgatgttccct 2159687 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 283 cagaccgtatctttgcacaggatttgacatctaccttgtttgggaacc 330 |||||| || ||||| |||||||||||||| ||||| || |||||||| Sbjct: 2159449 cagaccatacctttgtacaggatttgacatttacctagtctgggaacc 2159402
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B11 Length = 179858 Score = 135 bits (68), Expect = 2e-28 Identities = 143/168 (85%) Strand = Plus / Minus Query: 340 gtgtgctatggcgcttgtacatcaaaggttcaagcgcgtcttctatgctttccctaatcc 399 |||||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||||| Sbjct: 21153 gtgtgcgatggcacttgtacatcaaagattcaaacgtatcttctatgctttcccaaatcc 21094 Query: 400 cgtaactggagcactaggtagtgtctacagattgcacgggaagaaaagcttgaatcacca 459 | ||||||||||| || ||||||||||||||||||||| ||||||| || ||||| | Sbjct: 21093 aattactggagcactgggcagtgtctacagattgcacggggagaaaagtttaaatcatcg 21034 Query: 460 ttactccgtgtttaggataaaagttcctgaggcatatttgaatggttc 507 |||||| || |||||| ||||||| || ||| |||||| |||| |||| Sbjct: 21033 ttactctgtatttagggtaaaagtgcccgagtcatattcgaatagttc 20986 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 27 agcagaagacactgccgtctgaaggtggttttctctggcatcctctgtggcatgctgcag 86 |||||||| || |||| | |||||||||||||| ||||| |||||| | |||||||| Sbjct: 21631 agcagaagtcattgccctgtgaaggtggttttccatggcaccctctgagacatgctgcca 21572 Query: 87 tagttgccattgaaaatgccgccgagagggatagaatgacgttccct 133 ||||||| ||||||||||| || |||||||||| | ||| ||||||| Sbjct: 21571 tagttgcgattgaaaatgctgcggagagggataaagtgatgttccct 21525 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 283 cagaccgtatctttgcacaggatttgacatctaccttgtttgggaacc 330 |||||| || ||||| |||||||||||||| ||||| || |||||||| Sbjct: 21287 cagaccatacctttgtacaggatttgacatttacctagtctgggaacc 21240
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 135 bits (68), Expect = 2e-28 Identities = 143/168 (85%) Strand = Plus / Minus Query: 340 gtgtgctatggcgcttgtacatcaaaggttcaagcgcgtcttctatgctttccctaatcc 399 |||||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||||| Sbjct: 84732 gtgtgcgatggcacttgtacatcaaagattcaaacgtatcttctatgctttcccaaatcc 84673 Query: 400 cgtaactggagcactaggtagtgtctacagattgcacgggaagaaaagcttgaatcacca 459 | ||||||||||| || ||||||||||||||||||||| ||||||| || ||||| | Sbjct: 84672 aattactggagcactgggcagtgtctacagattgcacggggagaaaagtttaaatcatcg 84613 Query: 460 ttactccgtgtttaggataaaagttcctgaggcatatttgaatggttc 507 |||||| || |||||| ||||||| || ||| |||||| |||| |||| Sbjct: 84612 ttactctgtatttagggtaaaagtgcccgagtcatattcgaatagttc 84565 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 27 agcagaagacactgccgtctgaaggtggttttctctggcatcctctgtggcatgctgcag 86 |||||||| || |||| | |||||||||||||| ||||| |||||| | |||||||| Sbjct: 85210 agcagaagtcattgccctgtgaaggtggttttccatggcaccctctgagacatgctgcca 85151 Query: 87 tagttgccattgaaaatgccgccgagagggatagaatgacgttccct 133 ||||||| ||||||||||| || |||||||||| | ||| ||||||| Sbjct: 85150 tagttgcgattgaaaatgctgcggagagggataaagtgatgttccct 85104 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 283 cagaccgtatctttgcacaggatttgacatctaccttgtttgggaacc 330 |||||| || ||||| |||||||||||||| ||||| || |||||||| Sbjct: 84866 cagaccatacctttgtacaggatttgacatttacctagtctgggaacc 84819
>ref|NM_122376.3| Arabidopsis thaliana hydrolase/ zinc ion binding AT5G24670 mRNA, complete cds Length = 1785 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 338 atgtgtgctatggcgcttgtacatcaaag 366 |||||||||||||||||||| |||||||| Sbjct: 1431 atgtgtgctatggcgcttgtgcatcaaag 1459
>gb|BT020197.1| Arabidopsis thaliana At5g24670 mRNA, complete cds Length = 1203 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 338 atgtgtgctatggcgcttgtacatcaaag 366 |||||||||||||||||||| |||||||| Sbjct: 1021 atgtgtgctatggcgcttgtgcatcaaag 1049
>gb|BT015762.1| Arabidopsis thaliana At5g24670 mRNA, complete cds Length = 1593 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 338 atgtgtgctatggcgcttgtacatcaaag 366 |||||||||||||||||||| |||||||| Sbjct: 1362 atgtgtgctatggcgcttgtgcatcaaag 1390
>emb|BX829682.1|CNS09YQM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 338 atgtgtgctatggcgcttgtacatcaaag 366 |||||||||||||||||||| |||||||| Sbjct: 1395 atgtgtgctatggcgcttgtgcatcaaag 1423
>dbj|AB016881.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC17 Length = 27263 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 340 gtgtgctatggcgcttgtacatcaaag 366 |||||||||||||||||| |||||||| Sbjct: 10642 gtgtgctatggcgcttgtgcatcaaag 10668
>gb|AC154652.2| Mus musculus BAC clone RP24-261L18 from chromosome 17, complete sequence Length = 166922 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 caggaactttgttctgcagtga 586 |||||||||||||||||||||| Sbjct: 4270 caggaactttgttctgcagtga 4249
>gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, complete sequence Length = 189055 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 ctgttctgaaaaagggtgctc 534 ||||||||||||||||||||| Sbjct: 97480 ctgttctgaaaaagggtgctc 97460
>emb|BX649455.14| Zebrafish DNA sequence from clone CH211-151J12 in linkage group 4, complete sequence Length = 116689 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 tggttcaactgactgttctga 522 ||||||||||||||||||||| Sbjct: 19483 tggttcaactgactgttctga 19503
>ref|NM_101792.2| Arabidopsis thaliana BES1 (BRI1-EMS-SUPPRESSOR 1); transcription regulator AT1G19350 (BES1) transcript variant AT1G19350.1 mRNA, complete cds Length = 1391 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 381 cttcttcaacaacccaacca 362
>ref|NM_202136.1| Arabidopsis thaliana BES1 (BRI1-EMS-SUPPRESSOR 1) AT1G19350 (BES1) transcript variant AT1G19350.5 mRNA, complete cds Length = 1468 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 458 cttcttcaacaacccaacca 439
>ref|NM_202135.1| Arabidopsis thaliana BES1 (BRI1-EMS-SUPPRESSOR 1) AT1G19350 (BES1) transcript variant AT1G19350.4 mRNA, complete cds Length = 1430 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 420 cttcttcaacaacccaacca 401
>ref|NM_202134.1| Arabidopsis thaliana BES1 (BRI1-EMS-SUPPRESSOR 1) AT1G19350 (BES1) transcript variant AT1G19350.3 mRNA, complete cds Length = 1465 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 455 cttcttcaacaacccaacca 436
>ref|NM_106164.3| Arabidopsis thaliana BZR1 (BRASSINAZOLE-RESISTANT 1); transcription regulator AT1G75080 (BZR1) transcript variant AT1G75080.1 mRNA, complete cds Length = 1563 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 452 cttcttcaacaacccaacca 433
>ref|NM_202416.1| Arabidopsis thaliana BZR1 (BRASSINAZOLE-RESISTANT 1) AT1G75080 (BZR1) transcript variant AT1G75080.2 mRNA, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 452 cttcttcaacaacccaacca 433
>gb|BT015454.1| Arabidopsis thaliana At1g75080 mRNA sequence Length = 1008 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 244 cttcttcaacaacccaacca 225
>ref|NM_004999.3| Homo sapiens myosin VI (MYO6), mRNA Length = 8662 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2323 ggtgctcaaattctgtctca 2342
>gb|AC183321.1| Ornithorhynchus anatinus BAC clone OABb-153H21 from chromosome unknown, complete sequence Length = 161060 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 attctgtctcatcttagcac 556 |||||||||||||||||||| Sbjct: 34968 attctgtctcatcttagcac 34949
>gb|AY728266.1| Trypanosoma cruzi voucher Dm28c zinc finger protein 7 (zinc7) gene, partial cds; and zinc finger protein 8 (zinc8), heavy chain clathrin (claH), and alpha6 proteasome subunit (pr29A) genes, complete cds Length = 14737 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tgccattgaaaatgccgccgagag 114 ||||||||||| |||||||||||| Sbjct: 11520 tgccattgaaactgccgccgagag 11543
>ref|XM_390710.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10534.1) partial mRNA Length = 1368 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tcttcaacaacccaaccaaa 162 |||||||||||||||||||| Sbjct: 1330 tcttcaacaacccaaccaaa 1311
>ref|XM_862495.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 8 (LOC481884), mRNA Length = 3947 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2044 ggtgctcaaattctgtctca 2063
>ref|XM_862486.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 7 (LOC481884), mRNA Length = 3935 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2044 ggtgctcaaattctgtctca 2063
>ref|XM_862476.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 6 (LOC481884), mRNA Length = 3926 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2044 ggtgctcaaattctgtctca 2063
>ref|XM_862465.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 5 (LOC481884), mRNA Length = 3983 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2047 ggtgctcaaattctgtctca 2066
>ref|XM_848452.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 2 (LOC481884), mRNA Length = 3971 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2044 ggtgctcaaattctgtctca 2063
>ref|XM_862445.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 4 (LOC481884), mRNA Length = 3890 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2053 ggtgctcaaattctgtctca 2072
>ref|XM_862436.1| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 3 (LOC481884), mRNA Length = 3923 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2053 ggtgctcaaattctgtctca 2072
>ref|XM_539005.2| PREDICTED: Canis familiaris similar to Myosin-6 (Myosin VI), transcript variant 1 (LOC481884), mRNA Length = 3881 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2044 ggtgctcaaattctgtctca 2063
>ref|XM_804685.1| Trypanosoma cruzi strain CL Brener clathrin heavy chain (Tc00.1047053506167.50) partial mRNA Length = 5115 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tgccattgaaaatgccgccgagag 114 ||||||||||| |||||||||||| Sbjct: 4656 tgccattgaaactgccgccgagag 4679
>ref|XM_797773.1| Trypanosoma cruzi strain CL Brener clathrin heavy chain (Tc00.1047053507785.10) partial mRNA Length = 1242 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tgccattgaaaatgccgccgagag 114 ||||||||||| |||||||||||| Sbjct: 783 tgccattgaaactgccgccgagag 806
>emb|AL590222.4| Human DNA sequence from clone RP11-159L8 on chromosome Xq13.2-21.2 Contains the gene for a putative purinergic receptor (FKSG79), complete sequence Length = 166810 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 aagttaaatggtgatgtagataat 184 ||||| |||||||||||||||||| Sbjct: 43724 aagttcaatggtgatgtagataat 43701
>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a novel gene and a novel pseudogene, complete sequence Length = 119343 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aaagttaaatggtgatgtag 179 |||||||||||||||||||| Sbjct: 80531 aaagttaaatggtgatgtag 80512
>emb|AL136093.8| Human DNA sequence from clone RP3-472A9 on chromosome 6q13-14.3 Contains the 3' end of the MYO6 gene for myosin VI (DFNA22 KIAA0389), complete sequence Length = 85195 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 39694 ggtgctcaaattctgtctca 39713
>emb|BX571862.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 4/17 Length = 349519 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 agttgccattgaaaatgccgccga 111 |||||||||||||||||| ||||| Sbjct: 132491 agttgccattgaaaatgcggccga 132468
>emb|AL732438.17| Mouse DNA sequence from clone RP23-317K5 on chromosome X, complete sequence Length = 157834 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 aaattctgtctcatcttagc 554 |||||||||||||||||||| Sbjct: 109203 aaattctgtctcatcttagc 109184
>emb|BX510352.17| Zebrafish DNA sequence from clone DKEY-96J11 in linkage group 18, complete sequence Length = 152387 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 gcatatttgaatggttcaac 510 |||||||||||||||||||| Sbjct: 134824 gcatatttgaatggttcaac 134805
>gb|AF494338.1| Arabidopsis thaliana BZR1 protein (BZR1) gene, complete cds Length = 2687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 1349 cttcttcaacaacccaacca 1330
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 481 agttcctgaggcatatttgaatggttca 508 |||| ||||||||||||| ||||||||| Sbjct: 1674544 agttactgaggcatattttaatggttca 1674517
>gb|AY093747.1| Arabidopsis thaliana At1g75080/F9E10_7 mRNA, complete cds Length = 1011 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 247 cttcttcaacaacccaacca 228
>gb|AY065049.1| Arabidopsis thaliana At1g75080/F9E10_7 mRNA, complete cds Length = 1476 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 452 cttcttcaacaacccaacca 433
>gb|AY065041.1| Arabidopsis thaliana At1g19350/F18O14_4 mRNA, complete cds Length = 1340 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 381 cttcttcaacaacccaacca 362
>gb|AF036694.1| Caenorhabditis elegans cosmid CD4, complete sequence Length = 29500 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 aatggttcaactgactgttc 519 |||||||||||||||||||| Sbjct: 8312 aatggttcaactgactgttc 8293
>ref|NM_072072.3| Caenorhabditis elegans CD4.5 (CD4.5) mRNA, complete cds Length = 1035 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 aatggttcaactgactgttc 519 |||||||||||||||||||| Sbjct: 308 aatggttcaactgactgttc 289
>tpg|BK000396.1| TPA: TPA_exp: Arabidopsis thaliana BZR2 (BZR2) gene, complete cds Length = 3000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 1580 cttcttcaacaacccaacca 1561
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ggctaaagatagttgcaaat 229 |||||||||||||||||||| Sbjct: 10572 ggctaaagatagttgcaaat 10591
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ggctaaagatagttgcaaat 229 |||||||||||||||||||| Sbjct: 154719 ggctaaagatagttgcaaat 154738
>emb|BX816485.1|CNS0ABNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1453 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 343 cttcttcaacaacccaacca 324
>emb|BX816428.1|CNS0ABOO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1595 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 387 cttcttcaacaacccaacca 368
>emb|BX816262.1|CNS0ABSD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZA10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 392 cttcttcaacaacccaacca 373
>emb|BX815375.1|CNS0ACDG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1381 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 455 cttcttcaacaacccaacca 436
>emb|BX813837.1|CNS0ACC1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 441 cttcttcaacaacccaacca 422
>emb|BX816369.1|CNS0ABVF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 364 cttcttcaacaacccaacca 345
>emb|BX814738.1|CNS0ABZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1289 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 339 cttcttcaacaacccaacca 320
>emb|BX813472.1|CNS0ABY7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 317 cttcttcaacaacccaacca 298
>emb|BX817116.1|CNS0ABL5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1505 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 408 cttcttcaacaacccaacca 389
>emb|BX817031.1|CNS0ABQV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1413 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 362 cttcttcaacaacccaacca 343
>emb|BX815184.1|CNS0ABJ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1447 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 415 cttcttcaacaacccaacca 396
>emb|BX817328.1|CNS0AB9X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 385 cttcttcaacaacccaacca 366
>emb|BX815111.1|CNS0ABEI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 392 cttcttcaacaacccaacca 373
>emb|BX814280.1|CNS0AAK1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1384 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 371 cttcttcaacaacccaacca 352
>emb|BX813954.1|CNS0AAJT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1477 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 409 cttcttcaacaacccaacca 390
>gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosome 13, complete sequence Length = 216294 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tgacttacctgaaagaaaca 284 |||||||||||||||||||| Sbjct: 190861 tgacttacctgaaagaaaca 190842
>gb|AF229098.1|F229081S18 Homo sapiens myosin VI (MYO6) gene, exon 20 Length = 1032 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 523 ggtgctcaaattctgtctca 542
>gb|AC013258.5|AC013258 Arabidopsis thaliana chromosome 1 BAC F9E10 genomic sequence, complete sequence Length = 97263 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 17412 cttcttcaacaacccaacca 17431
>dbj|AB051122.1| Macaca fascicularis brain cDNA, clone:QccE-19736, similar to human F-box protein 15 (FBXO15), mRNA, NM_152676 Length = 1964 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 acacatccagcacacagcag 264 |||||||||||||||||||| Sbjct: 619 acacatccagcacacagcag 600
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 22280 cttcttcaacaacccaacca 22261
>gb|AY087257.1| Arabidopsis thaliana clone 33367 mRNA, complete sequence Length = 1501 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 433 cttcttcaacaacccaacca 414
>gb|AY086340.1| Arabidopsis thaliana clone 24157 mRNA, complete sequence Length = 1359 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 355 cttcttcaacaacccaacca 336
>gb|U90236.2|HSU90236 Homo sapiens myosin VI (MYO6) mRNA, complete cds Length = 4117 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2164 ggtgctcaaattctgtctca 2183
>emb|BX647397.1|HSM807542 Homo sapiens mRNA; cDNA DKFZp686L10144 (from clone DKFZp686L10144) Length = 3435 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2314 ggtgctcaaattctgtctca 2333
>dbj|AB002387.1| Homo sapiens mRNA for KIAA0389 gene, partial cds Length = 5212 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ggtgctcaaattctgtctca 547 |||||||||||||||||||| Sbjct: 2183 ggtgctcaaattctgtctca 2202
>gb|AF134217.1|AF134217 Arabidopsis thaliana 107 protein (107) mRNA, complete cds Length = 1257 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcttcaacaacccaacca 160 |||||||||||||||||||| Sbjct: 298 cttcttcaacaacccaacca 279
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ggctaaagatagttgcaaat 229 |||||||||||||||||||| Sbjct: 260485 ggctaaagatagttgcaaat 260504
>gb|AF089862.1|AF089862 Staphylococcus carnosus type-I signal peptidase SipA (sipA) and type-I signal peptidase SipB (sipB) genes, complete cds; and unknown gene Length = 2403 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 aagaaaagcttgaatcaccattac 463 ||||||||||||||||| |||||| Sbjct: 1035 aagaaaagcttgaatcaacattac 1012
>gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complete sequence Length = 197951 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cccaaccaaagttaaatggt 172 |||||||||||||||||||| Sbjct: 87551 cccaaccaaagttaaatggt 87570 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,687,346 Number of Sequences: 3902068 Number of extensions: 5687346 Number of successful extensions: 97965 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97815 Number of HSP's gapped (non-prelim): 149 length of query: 664 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 641 effective length of database: 17,143,297,704 effective search space: 10988853828264 effective search space used: 10988853828264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)