ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37j11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107292.1| Zea mays PCO067487 mRNA sequence Length = 1391 Score = 482 bits (243), Expect = e-133 Identities = 480/559 (85%) Strand = Plus / Plus Query: 11 ttgatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaac 70 ||||||| ||||||||||| |||||||||||| | ||||||||||||||| ||||||||| Sbjct: 528 ttgatgttctcctgtacgtggatcgtttggatgcgtatagaatggatacactggatgaac 587 Query: 71 aagttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttg 130 | ||||||||||||||||| | |||| |||| || | |||||| ||||| | ||||||| Sbjct: 588 aggttataagagccatcaccaattcatttggaaaagatatttggcgaagatcattggttg 647 Query: 131 tattgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaa 190 | ||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||| Sbjct: 648 tgttgacccatgctcaactctcaccacctgatggaatcgactataatgatttctttacaa 707 Query: 191 gaagatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaat 250 ||||||||||| | ||| ||||||| |||| || || ||||||||| ||| |||||| Sbjct: 708 gaagatcagaggcacttttgcgatacatccactcgggagcaggaatcaagaaacgagaat 767 Query: 251 atgcggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatg 310 ||| |||||| || ||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 768 atggggatttccctttgccaatagcattggtagagaacagtggaaggtgcaagactaacg 827 Query: 311 agaatggggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaa 370 || |||||| |||||| ||||| ||||||||||| ||| ||||||| |||||||||||| Sbjct: 828 agcatggggagaagatacttccggatggaactccgtgggttccaaaactgatgaaagaaa 887 Query: 371 tcactatcgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacg 430 | ||| | ||| ||||||| || |||| | ||||||||||||||||||||||||| || | Sbjct: 888 ttactgttgttatctcaaacgggagcaagcccattcatgttgatcagaagttaattgatg 947 Query: 431 gtccaaatccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtact 490 ||||||| || |||||||||||||||| || |||||| | || ||||||||| |||||| Sbjct: 948 gtccaaaccctaacaatcgctggaagatgttcataccaattatacttgctgtggagtact 1007 Query: 491 tttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctgg 550 | || || |||||||||||| |||||||||| ||| | || || | || |||||| ||| Sbjct: 1008 tcttggtagtaaaaggaatccggagggcgatccatgcagatatcgcaaatgggaaggtgg 1067 Query: 551 atgactgggagcagcgtta 569 ||||||||||||||||||| Sbjct: 1068 atgactgggagcagcgtta 1086
>dbj|AK099032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128A13, full insert sequence Length = 1321 Score = 480 bits (242), Expect = e-132 Identities = 518/610 (84%) Strand = Plus / Plus Query: 11 ttgatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaac 70 ||||||||||||| || || ||||| |||||| |||| |||||||| || |||||||| | Sbjct: 485 ttgatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatc 544 Query: 71 aagttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttg 130 ||||||| ||||| |||| | |||| |||| |||||||||||| ||||||| ||||||| Sbjct: 545 aagttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttg 604 Query: 131 tattgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaa 190 |||| || ||||| || ||||| |||||||||||| | |||||||| |||||| || ||| Sbjct: 605 tattaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaa 664 Query: 191 gaagatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaat 250 |||||| ||||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| Sbjct: 665 aaagatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaac 724 Query: 251 atgcggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatg 310 || |||||||||||||||||| || |||| |||||||||||||||||||| ||||||| Sbjct: 725 ttggggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatg 784 Query: 311 agaatggggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaa 370 ||||||| | |||| |||| ||||||||||||||||||||||| |||||||||||||| | Sbjct: 785 agaatggagagaaggttctccctgatggaactccatggattccgaacttgatgaaagaga 844 Query: 371 tcactatcgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacg 430 | |||| ||||||||||| || |||| ||||||||||||||||| ||| |||| || | Sbjct: 845 ttactactgttgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatg 904 Query: 431 gtccaaatccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtact 490 |||||||||| |||||||||||||||| || |||||| ||||||||| ||| |||||| Sbjct: 905 gtccaaatcccaacaatcgctggaagatgttcataccgctcatccttatggtggagtact 964 Query: 491 tttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctgg 550 |||| || |||||||| ||| | ||||| |||||| ||||||| || ||||||||||| | Sbjct: 965 ttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctag 1024 Query: 551 atgactgggagcagcgttatagagatctggttggaagcggtaacccggtagaccaaaaag 610 |||||||||| |||||||| ||||| ||||||||||| ||||||||||||| |||| Sbjct: 1025 atgactgggaacagcgttacagagacttggttggaagcaaggacccggtagaccagaaag 1084 Query: 611 tttcgtcatc 620 ||| ||||| Sbjct: 1085 gttcatcatc 1094
>emb|AJ271049.1|ZMA271049 Zea mays mRNA for Toc34-2 protein (toc34B gene) Length = 1313 Score = 478 bits (241), Expect = e-131 Identities = 478/557 (85%) Strand = Plus / Plus Query: 13 gatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaa 72 ||||| ||||||||||| |||||||||||| | ||||||||||||||| |||||||||| Sbjct: 487 gatgttctcctgtacgtggatcgtttggatgcgtatagaatggatacactggatgaacag 546 Query: 73 gttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttgta 132 ||||||||||||||||| | |||| |||| || | |||||| ||||| | |||||||| Sbjct: 547 gttataagagccatcaccaattcatttggaaaagatatttggcgaagatcattggttgtg 606 Query: 133 ttgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaaga 192 ||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||||| Sbjct: 607 ttgacccatgctcaactctcaccacctgatggaatcgactataatgatttctttacaaga 666 Query: 193 agatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatat 252 ||||||||| | ||| ||||||| |||| || || ||||||||| |||| |||||||| Sbjct: 667 agatcagaggcacttttgcgatacatccactcaggagcaggaatcaacaaacgagaatat 726 Query: 253 gcggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgag 312 | |||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 727 ggggatttccccttgccaatagcattggtggagaacagtggaaggtgcaagactaatgag 786 Query: 313 aatggggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatc 372 |||||| |||||| ||||| || ||||||| ||| |||||||| ||||||||||||| Sbjct: 787 catggggagaagatacttccggacggaactctgtgggttccaaacctgatgaaagaaatt 846 Query: 373 actatcgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggt 432 ||| | || ||||||| || ||||| ||||||||||||||||||||||||| || ||| Sbjct: 847 actgttgtcatctcaaacgggagcagtcccattcatgttgatcagaagttaattgatggt 906 Query: 433 ccaaatccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttt 492 ||||| || ||||||||| | ||| || |||||| || |||||||||||| ||||||| Sbjct: 907 ccaaaccctaacaatcgccgaaagttgttcataccacttatccttgctgtggagtacttc 966 Query: 493 tttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggat 552 || ||||||||||||||| |||||||||| ||| | || || | ||||||||| | ||| Sbjct: 967 ttggtggtaaaaggaatccggagggcgatccatgcagatatcgcaaacgggaaggtagat 1026 Query: 553 gactgggagcagcgtta 569 ||||||||||||||||| Sbjct: 1027 gactgggagcagcgtta 1043
>dbj|AK058676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H08, full insert sequence Length = 1406 Score = 476 bits (240), Expect = e-131 Identities = 516/608 (84%) Strand = Plus / Plus Query: 13 gatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaa 72 ||||||||||| || || ||||| |||||| |||| |||||||| || |||||||| ||| Sbjct: 564 gatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatcaa 623 Query: 73 gttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttgta 132 ||||| ||||| |||| | |||| |||| |||||||||||| ||||||| ||||||||| Sbjct: 624 gttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttgta 683 Query: 133 ttgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaaga 192 || || ||||| || ||||| |||||||||||| | |||||||| |||||| || ||| | Sbjct: 684 ttaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaaaa 743 Query: 193 agatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatat 252 ||||| ||||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| | Sbjct: 744 agatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaactt 803 Query: 253 gcggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgag 312 | |||||||||||||||||| || |||| |||||||||||||||||||| ||||||||| Sbjct: 804 ggggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgag 863 Query: 313 aatggggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatc 372 ||||| | |||| |||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 864 aatggagagaaggttctccctgatggaactccatggattccgaacttgatgaaagagatt 923 Query: 373 actatcgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggt 432 |||| ||||||||||| || |||| ||||||||||||||||| ||| |||| || ||| Sbjct: 924 actactgttgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatggt 983 Query: 433 ccaaatccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttt 492 |||||||| |||||||||||||||| || |||||| ||||||||| ||| |||||||| Sbjct: 984 ccaaatcccaacaatcgctggaagatgttcataccgctcatccttatggtggagtacttt 1043 Query: 493 tttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggat 552 || || |||||||| ||| | ||||| |||||| ||||||| || ||||||||||| ||| Sbjct: 1044 ttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctagat 1103 Query: 553 gactgggagcagcgttatagagatctggttggaagcggtaacccggtagaccaaaaagtt 612 |||||||| |||||||| ||||| ||||||||||| ||||||||||||| |||| | Sbjct: 1104 gactgggaacagcgttacagagacttggttggaagcaaggacccggtagaccagaaaggt 1163 Query: 613 tcgtcatc 620 || ||||| Sbjct: 1164 tcatcatc 1171
>emb|AJ245968.2|ZMA245968 Zea mays mRNA for Toc34-1 protein (toc34A gene) Length = 1233 Score = 434 bits (219), Expect = e-118 Identities = 474/559 (84%) Strand = Plus / Plus Query: 11 ttgatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaac 70 ||||||| |||||||| || |||||||||||| | || |||||||||||| | |||| || Sbjct: 439 ttgatgttctcctgtatgtggatcgtttggatgcgtacagaatggatacacttgatggac 498 Query: 71 aagttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttg 130 | ||||||||||||||||| | |||| |||| || | |||||| ||||| | ||||||| Sbjct: 499 aggttataagagccatcaccaattcatttggaaaagatatttggcgaagatcattggttg 558 Query: 131 tattgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaa 190 | ||||||||||| |||||||| ||||||||||||||||| |||||||||||| || ||| Sbjct: 559 tgttgacccatgctcaactctcaccacctgatggaatcgagtataatgatttctttacaa 618 Query: 191 gaagatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaat 250 |||| |||||| | ||| ||||||| |||| || || ||||||||| ||| |||||| Sbjct: 619 gaaggtcagaggcacttttgcgatacatccactcgggagcaggaatcaagaaacgagaat 678 Query: 251 atgcggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatg 310 ||| |||||| || ||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 679 atggggatttccctttgccaatagcattggtagagaacagtggaaggtgcaagactaacg 738 Query: 311 agaatggggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaa 370 || |||||| |||||| ||||| ||||||||||| ||| ||||||| |||||||||||| Sbjct: 739 agcatggggagaagatacttccggatggaactccgtgggttccaaaactgatgaaagaaa 798 Query: 371 tcactatcgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacg 430 | ||| | ||| ||||||| || |||| | ||||||||||||||||||||||||| || | Sbjct: 799 ttactgttgttatctcaaacgggagcaagcccattcatgttgatcagaagttaattgatg 858 Query: 431 gtccaaatccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtact 490 ||||||| || |||||||||||||||| || |||||| | || ||||||||| |||||| Sbjct: 859 gtccaaaccctaacaatcgctggaagatgttcataccaattatacttgctgtggagtact 918 Query: 491 tttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctgg 550 | || || |||||||||||| |||||||||| ||| | || || | || |||||| ||| Sbjct: 919 tcttggtagtaaaaggaatccggagggcgatccatgcagatatcgcaaatgggaaggtgg 978 Query: 551 atgactgggagcagcgtta 569 ||||||||||||||||||| Sbjct: 979 atgactgggagcagcgtta 997
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 172 bits (87), Expect = 9e-40 Identities = 201/239 (84%) Strand = Plus / Minus Query: 11 ttgatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaac 70 ||||||||||||| || || ||||| |||||| |||| |||||||| || |||||||| | Sbjct: 7405741 ttgatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatc 7405682 Query: 71 aagttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttg 130 ||||||| ||||| |||| | |||| |||| |||||||||||| ||||||| ||||||| Sbjct: 7405681 aagttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttg 7405622 Query: 131 tattgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaa 190 |||| || ||||| || ||||| |||||||||||| | |||||||| |||||| || ||| Sbjct: 7405621 tattaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaa 7405562 Query: 191 gaagatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaa 249 |||||| ||||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| Sbjct: 7405561 aaagatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaa 7405503 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 326 ttcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgttgtct 385 |||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 7404287 ttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtct 7404228 Query: 386 caaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatccgaaca 445 |||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| |||| Sbjct: 7404227 caaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaaca 7404168 Query: 446 atcgctggaagaagtacatacctctcatcctt 477 |||||||||||| || |||||| ||||||||| Sbjct: 7404167 atcgctggaagatgttcataccgctcatcctt 7404136 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 484 cagtacttttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacggg 543 ||||||||||| || |||||||| ||| | ||||| |||||| ||||||| || |||||| Sbjct: 7404028 cagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacggg 7403969 Query: 544 aagctggatgactgggagcagcgttatagagatctggttggaagcggtaacccggtagac 603 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 7403968 aagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagac 7403909 Query: 604 caaaaagtttcgtcatc 620 || |||| ||| ||||| Sbjct: 7403908 cagaaaggttcatcatc 7403892 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 |||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| Sbjct: 7404445 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaa 7404386 Query: 315 tgg 317 ||| Sbjct: 7404385 tgg 7404383
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 172 bits (87), Expect = 9e-40 Identities = 201/239 (84%) Strand = Plus / Minus Query: 11 ttgatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaac 70 ||||||||||||| || || ||||| |||||| |||| |||||||| || |||||||| | Sbjct: 44296 ttgatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatc 44237 Query: 71 aagttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttg 130 ||||||| ||||| |||| | |||| |||| |||||||||||| ||||||| ||||||| Sbjct: 44236 aagttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttg 44177 Query: 131 tattgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaa 190 |||| || ||||| || ||||| |||||||||||| | |||||||| |||||| || ||| Sbjct: 44176 tattaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaa 44117 Query: 191 gaagatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaa 249 |||||| ||||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| Sbjct: 44116 aaagatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaa 44058 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 326 ttcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgttgtct 385 |||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 42842 ttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtct 42783 Query: 386 caaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatccgaaca 445 |||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| |||| Sbjct: 42782 caaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaaca 42723 Query: 446 atcgctggaagaagtacatacctctcatcctt 477 |||||||||||| || |||||| ||||||||| Sbjct: 42722 atcgctggaagatgttcataccgctcatcctt 42691 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 484 cagtacttttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacggg 543 ||||||||||| || |||||||| ||| | ||||| |||||| ||||||| || |||||| Sbjct: 42583 cagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacggg 42524 Query: 544 aagctggatgactgggagcagcgttatagagatctggttggaagcggtaacccggtagac 603 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 42523 aagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagac 42464 Query: 604 caaaaagtttcgtcatc 620 || |||| ||| ||||| Sbjct: 42463 cagaaaggttcatcatc 42447 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 |||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| Sbjct: 43000 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaa 42941 Query: 315 tgg 317 ||| Sbjct: 42940 tgg 42938
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 172 bits (87), Expect = 9e-40 Identities = 201/239 (84%) Strand = Plus / Minus Query: 11 ttgatgtcctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaac 70 ||||||||||||| || || ||||| |||||| |||| |||||||| || |||||||| | Sbjct: 7403576 ttgatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatc 7403517 Query: 71 aagttataagagccatcactagttcacttgggaaggccatttggagaagaaccttggttg 130 ||||||| ||||| |||| | |||| |||| |||||||||||| ||||||| ||||||| Sbjct: 7403516 aagttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttg 7403457 Query: 131 tattgacccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaa 190 |||| || ||||| || ||||| |||||||||||| | |||||||| |||||| || ||| Sbjct: 7403456 tattaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaa 7403397 Query: 191 gaagatcagagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaa 249 |||||| ||||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| Sbjct: 7403396 aaagatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaa 7403338 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 326 ttcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgttgtct 385 |||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 7402122 ttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtct 7402063 Query: 386 caaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatccgaaca 445 |||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| |||| Sbjct: 7402062 caaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaaca 7402003 Query: 446 atcgctggaagaagtacatacctctcatcctt 477 |||||||||||| || |||||| ||||||||| Sbjct: 7402002 atcgctggaagatgttcataccgctcatcctt 7401971 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 484 cagtacttttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacggg 543 ||||||||||| || |||||||| ||| | ||||| |||||| ||||||| || |||||| Sbjct: 7401863 cagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacggg 7401804 Query: 544 aagctggatgactgggagcagcgttatagagatctggttggaagcggtaacccggtagac 603 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 7401803 aagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagac 7401744 Query: 604 caaaaagtttcgtcatc 620 || |||| ||| ||||| Sbjct: 7401743 cagaaaggttcatcatc 7401727 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 |||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| Sbjct: 7402280 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaa 7402221 Query: 315 tgg 317 ||| Sbjct: 7402220 tgg 7402218
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 77365 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 77306 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 77305 tggggagaag 77296
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 97078 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 97137 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 97138 tggggagaag 97147
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 11269377 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 11269318 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 11269317 tggggagaag 11269308
>dbj|AK069144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005J09, full insert sequence Length = 3631 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 2839 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 2898 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 2899 tggggagaag 2908
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 11275817 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 11275758 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 11275757 tggggagaag 11275748
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| | Sbjct: 9723887 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatgacca 9723828 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 9723827 tggggagaag 9723818
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 314 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| | Sbjct: 121367 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatgacca 121308 Query: 315 tggggcgaag 324 ||||| |||| Sbjct: 121307 tggggagaag 121298
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 311 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 14704812 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 14704868
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 311 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 14659096 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 14659152
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 311 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 39273 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 39217
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 311 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 113987 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 113931
>ref|NM_183567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 44.1 bits (22), Expect = 0.54 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 311 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 1273 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 1330
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.54 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 311 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 19679002 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 19678945
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.54 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 311 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 10338317 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 10338374
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 44.1 bits (22), Expect = 0.54 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 255 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 311 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 45037 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 45094
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 44.1 bits (22), Expect = 0.54 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 255 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 311 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 129728 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 129671
>emb|AL603908.3| Human DNA sequence from clone RP11-331O9 on chromosome 6 Contains a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 8 (MTATP8) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, an NADH dehydrogenase 3 (MTND3) pseudogene, an NADH dehydrogenase 4L (NADH dehydrogenase, subunit 4L (complex I)) (MTND4L) pseudogene and an NADH dehydrogenase 4 (NADH dehydrogenase, subunit 4 (complex I)) (MTND4) pseudogene, complete sequence Length = 92896 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ttccaaacttgatgaaagaaatcac 374 ||||||||||||||||||| ||||| Sbjct: 1117 ttccaaacttgatgaaagacatcac 1093
>emb|AL391426.9| Human DNA sequence from clone RP11-461F2 on chromosome 6, complete sequence Length = 27736 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ttccaaacttgatgaaagaaatcac 374 ||||||||||||||||||| ||||| Sbjct: 26853 ttccaaacttgatgaaagacatcac 26829
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ggttgtattgacccatgccca 146 ||||||||||||||||||||| Sbjct: 2113379 ggttgtattgacccatgccca 2113359
>emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 in linkage group 1, complete sequence Length = 160094 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tcaggagggcgattcattctgacat 533 |||||||||| |||||||||||||| Sbjct: 120782 tcaggagggctattcattctgacat 120806
>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 194439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 agaacagtggaaggtgcaaga 304 ||||||||||||||||||||| Sbjct: 92614 agaacagtggaaggtgcaaga 92634
>gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete sequence Length = 192157 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 158649 aatccgaacaatcgctggaa 158630
>ref|XM_512123.1| PREDICTED: Pan troglodytes KIAA0427 (LOC455409), mRNA Length = 5226 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 gacccatgcccaactctccccacc 158 ||||||| |||||||||||||||| Sbjct: 3013 gacccatccccaactctccccacc 3036
>gb|DQ233256.1| Homo sapiens complement factor H (CFH) gene, complete cds Length = 99185 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ttccaaacttgatgaaagaaatca 373 ||||||| |||||||||||||||| Sbjct: 20775 ttccaaaattgatgaaagaaatca 20752
>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence Length = 155300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 aaaggaatcaggagggcgat 521 |||||||||||||||||||| Sbjct: 47873 aaaggaatcaggagggcgat 47892
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence Length = 176607 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gccaatagctttggcagaga 286 |||||||||||||||||||| Sbjct: 108784 gccaatagctttggcagaga 108765
>gb|AC124751.4| Mus musculus BAC clone RP23-274P18 from chromosome 13, complete sequence Length = 160979 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gttgtctcaaatggaagcag 398 |||||||||||||||||||| Sbjct: 103533 gttgtctcaaatggaagcag 103552
>gb|AC098709.3| Mus musculus BAC clone RP23-1K14 from 1, complete sequence Length = 189774 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 gctggaagaagtacatacct 468 |||||||||||||||||||| Sbjct: 45342 gctggaagaagtacatacct 45323
>gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for chloroplast product Length = 1376 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 120 aaccttggttgtattgacccatgcccaactctccccacctgatg 163 ||||||| |||| ||||| ||||| || ||||||||||||||| Sbjct: 690 aaccttgcttgttttgactcatgctcagttctccccacctgatg 733
>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence Length = 207860 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gttgtctcaaatggaagcag 398 |||||||||||||||||||| Sbjct: 29311 gttgtctcaaatggaagcag 29330
>gb|AY369783.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for chloroplast product Length = 1370 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 120 aaccttggttgtattgacccatgcccaactctccccacctgatg 163 ||||||| |||| ||||| ||||| || ||||||||||||||| Sbjct: 688 aaccttgcttgttttgactcatgctcagttctccccacctgatg 731
>emb|AL589655.5| Human DNA sequence from clone RP11-420A21 on chromosome 6 Contains a pseudogene similar to an integrin Alpha-E precursor fragment and part of the TEX27 gene for testis expressed sequence 27 (FLJ13222), complete sequence Length = 160789 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 110 tttggagaag-aaccttggttgtattga 136 |||||||||| ||||||||||||||||| Sbjct: 130052 tttggagaagtaaccttggttgtattga 130079
>gb|AC093567.13| Homo sapiens chromosome 18, clone RP11-484L8, complete sequence Length = 174698 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 gacccatgcccaactctccccacc 158 ||||||| |||||||||||||||| Sbjct: 33697 gacccatccccaactctccccacc 33720
>emb|AL121955.20|HSDJ62D2 Human DNA sequence from clone RP1-62D2 on chromosome 6 Contains the 3' end of the gene for a novel protein similar to synaptonemal complex protein 2 (SYCP2), the ELOVL2 gene for elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (SSC2), a novel gene and a CpG island, complete sequence Length = 125585 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gctttggcagagaacagtgg 293 |||||||||||||||||||| Sbjct: 6022 gctttggcagagaacagtgg 6041
>emb|AL049744.8|HSJ177P10 Human DNA sequence from clone RP1-177P10 on chromosome 1q31.2-32.1 Contains the HF1 gene for H factor 1 (complement) protein, complete sequence Length = 150626 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 ttccaaacttgatgaaagaaatca 373 ||||||| |||||||||||||||| Sbjct: 101479 ttccaaaattgatgaaagaaatca 101502
>gb|AC068672.11| Homo sapiens chromosome 8, clone RP11-566H8, complete sequence Length = 199583 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccaaacttgatgaaagaaat 371 |||||||||||||||||||| Sbjct: 169094 ccaaacttgatgaaagaaat 169113
>ref|NM_166403.1| Drosophila melanogaster CG9945-RB, transcript variant B (CG9945), mRNA Length = 2075 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 435 aatccgaacaatcgctggaa 454
>ref|NM_137650.2| Drosophila melanogaster CG9945-RA, transcript variant A (CG9945), mRNA Length = 1996 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 435 aatccgaacaatcgctggaa 454
>gb|AY075228.1| Drosophila melanogaster AT18160 full length cDNA Length = 1949 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 435 aatccgaacaatcgctggaa 454
>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence Length = 180302 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gccaatagctttggcagaga 286 |||||||||||||||||||| Sbjct: 159511 gccaatagctttggcagaga 159530
>emb|AL111885.1|CNS019O5 Botrytis cinerea strain T4 cDNA library Length = 756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tgatttccttgcaagaagat 196 |||||||||||||||||||| Sbjct: 423 tgatttccttgcaagaagat 442
>gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone BACR33D17, complete sequence Length = 156753 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 62045 aatccgaacaatcgctggaa 62064
>gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, region 57B2-B3, BAC clone BACR04I07, complete sequence Length = 123647 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 28939 aatccgaacaatcgctggaa 28958
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tcacttgggaaggccatttg 113 |||||||||||||||||||| Sbjct: 61578 tcacttgggaaggccatttg 61597
>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete sequence Length = 263535 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aatccgaacaatcgctggaa 455 |||||||||||||||||||| Sbjct: 104887 aatccgaacaatcgctggaa 104906
>gb|AC099712.21| Mus musculus chromosome 1, clone RP23-400C10, complete sequence Length = 196059 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 gctggaagaagtacatacct 468 |||||||||||||||||||| Sbjct: 46643 gctggaagaagtacatacct 46662 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,046,703 Number of Sequences: 3902068 Number of extensions: 5046703 Number of successful extensions: 88957 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 88640 Number of HSP's gapped (non-prelim): 310 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
