>2A5D_RABIT (Q28653) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit delta isoform (PP2A, B subunit, B' delta
isoform) (PP2A, B subunit, B56 delta isoform) (PP2A, B
subunit, PR61 delta isoform) (PP2A, B subunit, R5 delta
isoform) (PP2A,
Length = 586
Score = 179 bits (455), Expect = 4e-45
Identities = 84/180 (46%), Positives = 119/180 (66%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LKEEHK+FL + L+PLHK K++ +Y PQL YC+ QF++KE L+ VI GLLK+WP T+S
Sbjct: 299 LKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHS 358
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
K F K M PLFR++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 359 PKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSL 418
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
IS N +LPI++PAL RN++ HWN+++ + N K+F +M+QKL C + + E++K
Sbjct: 419 ISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQK 478
>2A5D_HUMAN (Q14738) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit delta isoform (PP2A, B subunit, B' delta
isoform) (PP2A, B subunit, B56 delta isoform) (PP2A, B
subunit, PR61 delta isoform) (PP2A, B subunit, R5 delta
isoform)
Length = 602
Score = 179 bits (455), Expect = 4e-45
Identities = 84/180 (46%), Positives = 119/180 (66%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LKEEHK+FL + L+PLHK K++ +Y PQL YC+ QF++KE L+ VI GLLK+WP T+S
Sbjct: 315 LKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHS 374
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
K F K M PLFR++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 375 PKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSL 434
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
IS N +LPI++PAL RN++ HWN+++ + N K+F +M+QKL C + + E++K
Sbjct: 435 ISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQK 494
>2A5G_RABIT (Q28651) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit gamma isoform (PP2A, B subunit, B' gamma
isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B
subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma
isoform) (PP2A,
Length = 524
Score = 177 bits (450), Expect = 1e-44
Identities = 83/181 (45%), Positives = 118/181 (65%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LKEEHK+FL K L+PLHK K++ +Y PQL YC+ QF++K+ L+ V+ LLKYWP T+S
Sbjct: 239 LKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHS 298
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
K F K M PLFR++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 299 PKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSL 358
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
IS N ILPI++P+L RN++ HWN+++ + N K+F +M+QKL C + + E+ K
Sbjct: 359 ISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLK 418
Query: 559 Q 561
+
Sbjct: 419 E 419
>2A5G_MOUSE (Q60996) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit gamma isoform (PP2A, B subunit, B' gamma
isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B
subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma
isoform) (PP2A,
Length = 524
Score = 177 bits (450), Expect = 1e-44
Identities = 83/181 (45%), Positives = 118/181 (65%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LKEEHK+FL K L+PLHK K++ +Y PQL YC+ QF++K+ L+ V+ LLKYWP T+S
Sbjct: 239 LKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHS 298
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
K F K M PLFR++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 299 PKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSL 358
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
IS N ILPI++P+L RN++ HWN+++ + N K+F +M+QKL C + + E+ K
Sbjct: 359 ISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLK 418
Query: 559 Q 561
+
Sbjct: 419 E 419
>2A5G_HUMAN (Q13362) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit gamma isoform (PP2A, B subunit, B' gamma
isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B
subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma
isoform) (NY-REN
Length = 524
Score = 177 bits (450), Expect = 1e-44
Identities = 83/181 (45%), Positives = 118/181 (65%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LKEEHK+FL K L+PLHK K++ +Y PQL YC+ QF++K+ L+ V+ LLKYWP T+S
Sbjct: 239 LKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHS 298
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
K F K M PLFR++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 299 PKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSL 358
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
IS N ILPI++P+L RN++ HWN+++ + N K+F +M+QKL C + + E+ K
Sbjct: 359 ISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLK 418
Query: 559 Q 561
+
Sbjct: 419 E 419
>2A5E_MOUSE (Q61151) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit epsilon isoform (PP2A, B subunit, B' epsilon
isoform) (PP2A, B subunit, B56 epsilon isoform) (PP2A, B
subunit, PR61 epsilon isoform) (PP2A, B subunit, R5
epsilon isofor
Length = 467
Score = 160 bits (405), Expect = 2e-39
Identities = 79/184 (42%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LK EHK FL K LIPLH +++ ++ QL YCI QF++K+P L+ VIRGL+K+WP T S
Sbjct: 256 LKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCS 315
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
QK F K PLF+++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 316 QKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSL 375
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKL---LLACQKNLQEE 549
I +N VILPI++ +L R ++ HWN +++ + NV K F +M+ + L A K+ ++
Sbjct: 376 IEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQR 435
Query: 550 EEKQ 561
E+K+
Sbjct: 436 EKKK 439
>2A5E_HUMAN (Q16537) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit epsilon isoform (PP2A, B subunit, B' epsilon
isoform) (PP2A, B subunit, B56 epsilon isoform) (PP2A, B
subunit, PR61 epsilon isoform) (PP2A, B subunit, R5
epsilon isofor
Length = 467
Score = 160 bits (405), Expect = 2e-39
Identities = 79/184 (42%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LK EHK FL K LIPLH +++ ++ QL YCI QF++K+P L+ VIRGL+K+WP T S
Sbjct: 256 LKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCS 315
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
QK F K PLF+++A C++S HFQVAERAL+ WNNE++ L
Sbjct: 316 QKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSL 375
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKL---LLACQKNLQEE 549
I +N VILPI++ +L R ++ HWN +++ + NV K F +M+ + L A K+ ++
Sbjct: 376 IEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQR 435
Query: 550 EEKQ 561
E+K+
Sbjct: 436 EKKK 439
>2A5B_HUMAN (Q15173) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit beta isoform (PP2A, B subunit, B' beta isoform)
(PP2A, B subunit, B56 beta isoform) (PP2A, B subunit,
PR61 beta isoform) (PP2A, B subunit, R5 beta isoform)
Length = 497
Score = 158 bits (399), Expect = 1e-38
Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LK EHK FL + LIPLH K++ ++ QL YC+ QF++K+ L+ VIRGLLKYWP T +
Sbjct: 270 LKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCT 329
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
QK F K PLF++VA C++S HFQVAERAL+ WNNE++ L
Sbjct: 330 QKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNEYILSL 389
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLL--LACQKNLQEEE 552
I N +LP ++ L + ++ HWNQ+++++ NV K F +M+ KL L L++++
Sbjct: 390 IEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLEKQQ 449
Query: 553 EKQ 561
E+Q
Sbjct: 450 EQQ 452
>2A5B_RABIT (Q28647) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit beta isoform (PP2A, B subunit, B' beta isoform)
(PP2A, B subunit, B56 beta isoform) (PP2A, B subunit,
PR61 beta isoform) (PP2A, B subunit, R5 beta isoform)
(PP2A, B sub
Length = 500
Score = 158 bits (399), Expect = 1e-38
Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LK EHK FL + LIPLH K++ ++ QL YC+ QF++K+ L+ VIRGLLKYWP T +
Sbjct: 270 LKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCT 329
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
QK F K PLF++VA C++S HFQVAERAL+ WNNE++ L
Sbjct: 330 QKEVMFLGEVEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNEYILSL 389
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLL--LACQKNLQEEE 552
I N +LP ++ L + ++ HWNQ+++++ NV K F +M+ KL L L++++
Sbjct: 390 IEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLEKQQ 449
Query: 553 EKQ 561
E+Q
Sbjct: 450 EQQ 452
>2A5A_MOUSE (Q6PD03) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit alpha isoform (PP2A, B subunit, B' alpha
isoform) (PP2A, B subunit, B56 alpha isoform) (PP2A, B
subunit, PR61 alpha isoform) (PP2A, B subunit, R5 alpha
isoform) (PR61al
Length = 486
Score = 155 bits (392), Expect = 7e-38
Identities = 74/181 (40%), Positives = 112/181 (61%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LK EHK FL K LIP+H K + ++ QL YC+ QF++K+ L+ VIRGLLK+WP T S
Sbjct: 264 LKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCS 323
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
QK F+K PLF++++ C++SSHFQVAERAL+ WNNE++ L
Sbjct: 324 QKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSL 383
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
I +N ILPI++ +L + ++ HWNQ+++ + NV K +M+ KL + + E ++
Sbjct: 384 IEENIDKILPIMFASLYKISKEHWNQTIVALVYNVLKTLMEMNGKLFDDLTSSYKAERQR 443
Query: 559 Q 561
+
Sbjct: 444 E 444
>2A5A_HUMAN (Q15172) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
subunit alpha isoform (PP2A, B subunit, B' alpha
isoform) (PP2A, B subunit, B56 alpha isoform) (PP2A, B
subunit, PR61 alpha isoform) (PP2A, B subunit, R5 alpha
isoform)
Length = 486
Score = 153 bits (386), Expect = 4e-37
Identities = 73/181 (40%), Positives = 111/181 (61%)
Frame = +1
Query: 19 LKEEHKLFLWKALIPLHKPKTVGMYLPQLTYCITQFIDKEPKLSGTVIRGLLKYWPVTNS 198
LK EHK FL K LIP+H K + ++ QL YC+ QF++K+ L+ VIRGLLK+WP T S
Sbjct: 264 LKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCS 323
Query: 199 QKXXXXXXXXXXXXXXXXXXXFQKCMVPLFRRVAHCLNSSHFQVAERALFLWNNEHLFGL 378
QK F+K PLF++++ C++SSHFQVAERAL+ WNNE++ L
Sbjct: 324 QKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSL 383
Query: 379 ISQNHQVILPIIYPALERNARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEK 558
I +N ILPI++ +L + ++ HWN +++ + NV K +M+ KL + + E ++
Sbjct: 384 IEENIDKILPIMFASLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYKAERQR 443
Query: 559 Q 561
+
Sbjct: 444 E 444
>HXB6_MOUSE (P09023) Homeobox protein Hox-B6 (Hox-2.2) (MH-22A)|
Length = 224
Score = 30.0 bits (66), Expect = 4.7
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Frame = +1
Query: 265 QKCMVPLF---RRVAHCLNSSHFQVAERALFLWNNEHLFGLISQNHQVILPIIYPALERN 435
QKC P++ +R+ C +SS R + L + H +E
Sbjct: 121 QKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 180
Query: 436 ARLHWNQSVLNITMNVRKMFFDMDQKLLLACQKNLQEEEEKQA 564
L + + I R+M + + KLL A Q + +EEEEK A
Sbjct: 181 HALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPA 223
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,138,667
Number of Sequences: 219361
Number of extensions: 1368767
Number of successful extensions: 3534
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3510
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)