| Clone Name | bags37i20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110A21, full insert sequence Length = 1924 Score = 446 bits (225), Expect = e-122 Identities = 462/541 (85%) Strand = Plus / Plus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 ||||||||||||||||| || || ||||||||||| || |||||||||| |||||||| Sbjct: 986 ttgaaggaggagcataagttgttcctgtggaaggcgttagttcctcttcacaaaccgaaa 1045 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || |||||| ||||||| || || ||||| || || |||| ||| || || || |||||| Sbjct: 1046 acggtgggcgtgtatctcccgcaattgacgtattgtattatacaattcatcgagaaggaa 1105 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 ||||||||| | |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 1106 ccaaagctcgcggggactgtaatcagaggcctactgaagtactggccagtgacgaacagt 1165 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || Sbjct: 1166 cagaaggagatgatgttccttggggagttggaggaggtgctggaattgacagaaatggct 1225 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 |||||||||||||||||||| || ||||||| ||| |||||||||| | |||||||| Sbjct: 1226 gagttccagaagtgcatggttccgctgtttcgaaggattgcacactgtctaaatagctca 1285 Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttg 378 || |||||||||||||| || || |||||||||||||||| ||||||||||| | |||| Sbjct: 1286 cactttcaggttgctgagagggcactattcctgtggaacaatgagcacttgtttgatttg 1345 Query: 379 atctctcaaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgct 438 ||||| ||||| | |||| ||| |||| |||||||||||||| || |||||||| || Sbjct: 1346 atctcccaaaatcgccaaactattatgccgatcatatatccagcgctggaaaggaacact 1405 Query: 439 cgtttgcattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttcttt 498 |||| ||| ||||||||||| ||||| ||| | |||||||| ||| ||||||||||| || Sbjct: 1406 cgttggcactggaaccaatcagttctaaatgtaacaatgaacgtccggaaaatgttcctt 1465 Query: 499 gacatggatcagaagctgctgttggcttgtcagaaaaatttgcaagaggaggaagagaag 558 || |||||| || ||| |||| ||||||||| ||||| |||||||||||||| ||| Sbjct: 1466 gaaatggatgagggactgttgttaacttgtcagaggaatttccaagaggaggaagaaaag 1525 Query: 559 c 559 | Sbjct: 1526 c 1526
>ref|XM_550380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 333 bits (168), Expect = 4e-88 Identities = 408/488 (83%) Strand = Plus / Plus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 |||||||| ||||| || || || || ||||| || ||||| || ||||| || || ||| Sbjct: 817 ttgaaggaagagcacaagttgttcctatggaaagcgttgatcccgcttcacaagccaaag 876 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || ||||| ||||||| || ||| |||| |||||||| |||||||| || || |||||| Sbjct: 877 acggtgggtgtgtatcttccgcagctgacgtactgcatcacacagttcatcgagaaggaa 936 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 | ||||| |||||||||| |||||||||||| |||||||||||||||| || |||||| Sbjct: 937 accaagcttgcagggactgtaatcagaggcctgctgaagtactggccagttacaaacagt 996 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| || Sbjct: 997 cagaaggagatgatgttcttgggggagttggaggaggtgctcgagttgaccgacatggct 1056 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 ||||| ||||| |||||||| || |||| || ||| ||||| ||| ||||||||||| Sbjct: 1057 gagtttcagaaatgcatggtaccgctgttccgcaggattgcaagttgcctgaatagctct 1116 Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttg 378 || ||||| |||||||| |||||||||||| |||||||||||||||||||||||| | || Sbjct: 1117 cactttcaagttgctgagagagccttattcttgtggaacaacgagcacttgttcgatatg 1176 Query: 379 atctctcaaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgct 438 ||||| ||||| | || || ||| | || ||||||||||||||||| || ||||| | Sbjct: 1177 atctcccaaaatcgtcaggtgatcctaccgatcatatatccagctctggagaggaacacc 1236 Query: 439 cgtttgcattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttcttt 498 |||| ||| ||||| || ||||| || ||| |||| ||||||||| |||||||||||| Sbjct: 1237 cgttggcactggaatcagtcggtcctcaatgttaccctgaatgtcaagaaaatgttcttg 1296 Query: 499 gacatgga 506 |||||||| Sbjct: 1297 gacatgga 1304
>dbj|AK108850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A06, full insert sequence Length = 845 Score = 315 bits (159), Expect = 9e-83 Identities = 342/403 (84%) Strand = Plus / Plus Query: 104 tgacatactgcattacacagtttattgacaaggaaccaaagctctcagggactgtgatca 163 |||| |||||||| |||||||| || || |||||| | ||||| |||||||||| |||| Sbjct: 8 tgacgtactgcatcacacagttcatcgagaaggaaaccaagcttgcagggactgtaatca 67 Query: 164 gaggcctgttgaagtactggccagtgacgaacagtcagaaggagatgatgttcttggggg 223 |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 68 gaggcctgctgaagtactggccagttacaaacagtcagaaggagatgatgttcttggggg 127 Query: 224 agttggaggaggtgctggaattgacagaaatgcctgagttccagaagtgcatggtcccat 283 |||||||||||||||| || ||||| || ||| ||||||| ||||| |||||||| || Sbjct: 128 agttggaggaggtgctcgagttgaccgacatggctgagtttcagaaatgcatggtaccgc 187 Query: 284 tgtttcggagggttgcacactgcttgaatagctctcattttcaggttgctgaaagagcct 343 |||| || ||| ||||| ||| ||||||||||||| ||||| |||||||| ||||||| Sbjct: 188 tgttccgcaggattgcaagttgcctgaatagctctcactttcaagttgctgagagagcct 247 Query: 344 tattcctgtggaacaacgagcacttgttcggtttgatctctcaaaaccaccaagttatct 403 ||||| |||||||||||||||||||||||| | ||||||| ||||| | || || ||| Sbjct: 248 tattcttgtggaacaacgagcacttgttcgatatgatctcccaaaatcgtcaggtgatcc 307 Query: 404 tgccaatcatatatccagctcttgaaaggaatgctcgtttgcattggaaccaatcggttc 463 | || ||||||||||||||||| || ||||| | |||| ||| ||||| || ||||| | Sbjct: 308 taccgatcatatatccagctctggagaggaacacccgttggcactggaatcagtcggtcc 367 Query: 464 ttaatattacaatgaatgtcaggaaaatgttctttgacatgga 506 | ||| |||| ||||||||| |||||||||||| |||||||| Sbjct: 368 tcaatgttaccctgaatgtcaagaaaatgttcttggacatgga 410
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Minus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 ||||||||||||||||| || || ||||||||||| || |||||||||| |||||||| Sbjct: 122685 ttgaaggaggagcataagttgttcctgtggaaggcgttagttcctcttcacaaaccgaaa 122626 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || |||||| ||||||| || || ||||| || || |||| ||| || || || |||||| Sbjct: 122625 acggtgggcgtgtatctcccgcaattgacgtattgtattatacaattcatcgagaaggaa 122566 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 ||||||||| | |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 122565 ccaaagctcgcggggactgtaatcagaggcctactgaagtactggccagtgacgaacagt 122506 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || Sbjct: 122505 cagaaggagatgatgttccttggggagttggaggaggtgctggaattgacagaaatggct 122446 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 |||||||||||||||||||| || ||||||| ||| |||||||||| | |||||||| Sbjct: 122445 gagttccagaagtgcatggttccgctgtttcgaaggattgcacactgtctaaatagctca 122386 Query: 319 cattttcaggt 329 || |||||||| Sbjct: 122385 cactttcaggt 122375 Score = 149 bits (75), Expect = 1e-32 Identities = 195/235 (82%) Strand = Plus / Minus Query: 325 caggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttgatctct 384 ||||||||||| || || |||||||||||||||| ||||||||||| | ||||||||| Sbjct: 121177 caggttgctgagagggcactattcctgtggaacaatgagcacttgtttgatttgatctcc 121118 Query: 385 caaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgctcgtttg 444 ||||| | |||| ||| |||| |||||||||||||| || |||||||| |||||| | Sbjct: 121117 caaaatcgccaaactattatgccgatcatatatccagcgctggaaaggaacactcgttgg 121058 Query: 445 cattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttctttgacatg 504 || ||||||||||| ||||| ||| | |||||||| ||| ||||||||||| |||| ||| Sbjct: 121057 cactggaaccaatcagttctaaatgtaacaatgaacgtccggaaaatgttccttgaaatg 120998 Query: 505 gatcagaagctgctgttggcttgtcagaaaaatttgcaagaggaggaagagaagc 559 ||| || ||| |||| ||||||||| ||||| |||||||||||||| |||| Sbjct: 120997 gatgagggactgttgttaacttgtcagaggaatttccaagaggaggaagaaaagc 120943
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Minus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 ||||||||||||||||| || || ||||||||||| || |||||||||| |||||||| Sbjct: 4612218 ttgaaggaggagcataagttgttcctgtggaaggcgttagttcctcttcacaaaccgaaa 4612159 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || |||||| ||||||| || || ||||| || || |||| ||| || || || |||||| Sbjct: 4612158 acggtgggcgtgtatctcccgcaattgacgtattgtattatacaattcatcgagaaggaa 4612099 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 ||||||||| | |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 4612098 ccaaagctcgcggggactgtaatcagaggcctactgaagtactggccagtgacgaacagt 4612039 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || Sbjct: 4612038 cagaaggagatgatgttccttggggagttggaggaggtgctggaattgacagaaatggct 4611979 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 |||||||||||||||||||| || ||||||| ||| |||||||||| | |||||||| Sbjct: 4611978 gagttccagaagtgcatggttccgctgtttcgaaggattgcacactgtctaaatagctca 4611919 Query: 319 cattttcaggt 329 || |||||||| Sbjct: 4611918 cactttcaggt 4611908 Score = 149 bits (75), Expect = 1e-32 Identities = 195/235 (82%) Strand = Plus / Minus Query: 325 caggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttgatctct 384 ||||||||||| || || |||||||||||||||| ||||||||||| | ||||||||| Sbjct: 4610710 caggttgctgagagggcactattcctgtggaacaatgagcacttgtttgatttgatctcc 4610651 Query: 385 caaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgctcgtttg 444 ||||| | |||| ||| |||| |||||||||||||| || |||||||| |||||| | Sbjct: 4610650 caaaatcgccaaactattatgccgatcatatatccagcgctggaaaggaacactcgttgg 4610591 Query: 445 cattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttctttgacatg 504 || ||||||||||| ||||| ||| | |||||||| ||| ||||||||||| |||| ||| Sbjct: 4610590 cactggaaccaatcagttctaaatgtaacaatgaacgtccggaaaatgttccttgaaatg 4610531 Query: 505 gatcagaagctgctgttggcttgtcagaaaaatttgcaagaggaggaagagaagc 559 ||| || ||| |||| ||||||||| ||||| |||||||||||||| |||| Sbjct: 4610530 gatgagggactgttgttaacttgtcagaggaatttccaagaggaggaagaaaagc 4610476
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Minus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 |||||||| ||||| || || || || ||||| || ||||| || ||||| || || ||| Sbjct: 4069409 ttgaaggaagagcacaagttgttcctatggaaagcgttgatcccgcttcacaagccaaag 4069350 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || ||||| ||||||| || ||| |||| |||||||| |||||||| || || |||||| Sbjct: 4069349 acggtgggtgtgtatcttccgcagctgacgtactgcatcacacagttcatcgagaaggaa 4069290 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 | ||||| |||||||||| |||||||||||| |||||||||||||||| || |||||| Sbjct: 4069289 accaagcttgcagggactgtaatcagaggcctgctgaagtactggccagttacaaacagt 4069230 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| || Sbjct: 4069229 cagaaggagatgatgttcttgggggagttggaggaggtgctcgagttgaccgacatggct 4069170 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 ||||| ||||| |||||||| || |||| || ||| ||||| ||| ||||||||||| Sbjct: 4069169 gagtttcagaaatgcatggtaccgctgttccgcaggattgcaagttgcctgaatagctct 4069110 Query: 319 cattttca 326 || ||||| Sbjct: 4069109 cactttca 4069102 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Minus Query: 325 caggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttgatctct 384 ||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct: 4068252 caggttgctgagagagccttattcttgtggaacaacgagcacttgttcgatatgatctcc 4068193 Query: 385 caaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgctcgtttg 444 ||||| | || || ||| | || ||||||||||||||||| || ||||| | |||| | Sbjct: 4068192 caaaatcgtcaggtgatcctaccgatcatatatccagctctggagaggaacacccgttgg 4068133 Query: 445 cattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttctttgacatg 504 || ||||| || ||||| || ||| |||| ||||||||| |||||||||||| |||||| Sbjct: 4068132 cactggaatcagtcggtcctcaatgttaccctgaatgtcaagaaaatgttcttggacatg 4068073 Query: 505 ga 506 || Sbjct: 4068072 ga 4068071
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Minus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 |||||||| ||||| || || || || ||||| || ||||| || ||||| || || ||| Sbjct: 36152 ttgaaggaagagcacaagttgttcctatggaaagcgttgatcccgcttcacaagccaaag 36093 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || ||||| ||||||| || ||| |||| |||||||| |||||||| || || |||||| Sbjct: 36092 acggtgggtgtgtatcttccgcagctgacgtactgcatcacacagttcatcgagaaggaa 36033 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 | ||||| |||||||||| |||||||||||| |||||||||||||||| || |||||| Sbjct: 36032 accaagcttgcagggactgtaatcagaggcctgctgaagtactggccagttacaaacagt 35973 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| || Sbjct: 35972 cagaaggagatgatgttcttgggggagttggaggaggtgctcgagttgaccgacatggct 35913 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 ||||| ||||| |||||||| || |||| || ||| ||||| ||| ||||||||||| Sbjct: 35912 gagtttcagaaatgcatggtaccgctgttccgcaggattgcaagttgcctgaatagctct 35853 Query: 319 cattttca 326 || ||||| Sbjct: 35852 cactttca 35845 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Minus Query: 325 caggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttgatctct 384 ||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct: 34995 caggttgctgagagagccttattcttgtggaacaacgagcacttgttcgatatgatctcc 34936 Query: 385 caaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgctcgtttg 444 ||||| | || || ||| | || ||||||||||||||||| || ||||| | |||| | Sbjct: 34935 caaaatcgtcaggtgatcctaccgatcatatatccagctctggagaggaacacccgttgg 34876 Query: 445 cattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttctttgacatg 504 || ||||| || ||||| || ||| |||| ||||||||| |||||||||||| |||||| Sbjct: 34875 cactggaatcagtcggtcctcaatgttaccctgaatgtcaagaaaatgttcttggacatg 34816 Query: 505 ga 506 || Sbjct: 34815 ga 34814
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Minus Query: 19 ttgaaggaggagcataaattatttctgtggaaggcattgattcctcttcataaaccgaag 78 |||||||| ||||| || || || || ||||| || ||||| || ||||| || || ||| Sbjct: 16380 ttgaaggaagagcacaagttgttcctatggaaagcgttgatcccgcttcacaagccaaag 16321 Query: 79 acagtgggcatgtatctgccacagttgacatactgcattacacagtttattgacaaggaa 138 || ||||| ||||||| || ||| |||| |||||||| |||||||| || || |||||| Sbjct: 16320 acggtgggtgtgtatcttccgcagctgacgtactgcatcacacagttcatcgagaaggaa 16261 Query: 139 ccaaagctctcagggactgtgatcagaggcctgttgaagtactggccagtgacgaacagt 198 | ||||| |||||||||| |||||||||||| |||||||||||||||| || |||||| Sbjct: 16260 accaagcttgcagggactgtaatcagaggcctgctgaagtactggccagttacaaacagt 16201 Query: 199 cagaaggagatgatgttcttgggggagttggaggaggtgctggaattgacagaaatgcct 258 ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| || Sbjct: 16200 cagaaggagatgatgttcttgggggagttggaggaggtgctcgagttgaccgacatggct 16141 Query: 259 gagttccagaagtgcatggtcccattgtttcggagggttgcacactgcttgaatagctct 318 ||||| ||||| |||||||| || |||| || ||| ||||| ||| ||||||||||| Sbjct: 16140 gagtttcagaaatgcatggtaccgctgttccgcaggattgcaagttgcctgaatagctct 16081 Query: 319 cattttca 326 || ||||| Sbjct: 16080 cactttca 16073 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Minus Query: 325 caggttgctgaaagagccttattcctgtggaacaacgagcacttgttcggtttgatctct 384 ||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct: 15223 caggttgctgagagagccttattcttgtggaacaacgagcacttgttcgatatgatctcc 15164 Query: 385 caaaaccaccaagttatcttgccaatcatatatccagctcttgaaaggaatgctcgtttg 444 ||||| | || || ||| | || ||||||||||||||||| || ||||| | |||| | Sbjct: 15163 caaaatcgtcaggtgatcctaccgatcatatatccagctctggagaggaacacccgttgg 15104 Query: 445 cattggaaccaatcggttcttaatattacaatgaatgtcaggaaaatgttctttgacatg 504 || ||||| || ||||| || ||| |||| ||||||||| |||||||||||| |||||| Sbjct: 15103 cactggaatcagtcggtcctcaatgttaccctgaatgtcaagaaaatgttcttggacatg 15044 Query: 505 ga 506 || Sbjct: 15043 ga 15042
>ref|NM_122462.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT5G25510 mRNA, complete cds Length = 2153 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 322 tttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 1531 tttcaggtttctgaaagagctttattcttgtggaacaacga 1571
>gb|AY142557.1| Arabidopsis thaliana putative AtBgamma protein (At5g25510) mRNA, complete cds Length = 1534 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 322 tttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 1141 tttcaggtttctgaaagagctttattcttgtggaacaacga 1181
>gb|AY059748.1| Arabidopsis thaliana putative AtBgamma protein (At5g25510) mRNA, complete cds Length = 2170 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 322 tttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 1531 tttcaggtttctgaaagagctttattcttgtggaacaacga 1571
>emb|BX830397.1|CNS0A1AA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 322 tttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 1488 tttcaggtttctgaaagagctttattcttgtggaacaacga 1528
>emb|BX829438.1|CNS0A1IN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 322 tttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 169 tttcaggtttctgaaagagctttattcttgtggaacaacga 209
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence Length = 110684 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 322 tttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 40880 tttcaggtttctgaaagagctttattcttgtggaacaacga 40840
>gb|AY106503.1| Zea mays PCO078532 mRNA sequence Length = 836 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 181 tggccagtgacgaacagtcagaaggagatgatgttcttgggggagttggaggaggt 236 ||||| |||||||||||| |||||| ||||||||||||| ||||| |||||||| Sbjct: 221 tggcctgtgacgaacagttcaaaggaggtgatgttcttgggtgagttagaggaggt 276
>ref|NM_120427.2| Arabidopsis thaliana ATB' ALPHA; protein phosphatase type 2A regulator AT5G03470 (ATB' ALPHA) mRNA, complete cds Length = 1986 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagca 365 ||||||| ||||||||||||| ||| |||| | ||| |||||||||||||||| Sbjct: 1492 tagctctaattttcaggttgcagaacgagctctgttcttgtggaacaacgagca 1545
>ref|XM_623649.1| PREDICTED: Apis mellifera similar to ENSANGP00000020339 (LOC551258), mRNA Length = 1293 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattc 348 ||||||||||||||||||||||| |||||| Sbjct: 1051 cattttcaggttgctgaaagagcattattc 1080
>gb|BT002933.1| Arabidopsis thaliana clone RAFL14-80-D07 (R20269) unknown protein (At5g03470) mRNA, complete cds Length = 2024 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagca 365 ||||||| ||||||||||||| ||| |||| | ||| |||||||||||||||| Sbjct: 1492 tagctctaattttcaggttgcagaacgagctctgttcttgtggaacaacgagca 1545
>gb|U73526.1|ATU73526 Arabidopsis thaliana B' regulatory subunit of PP2A (AtB'alpha) mRNA, complete cds Length = 1920 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagca 365 ||||||| ||||||||||||| ||| |||| | ||| |||||||||||||||| Sbjct: 1444 tagctctaattttcaggttgcagaacgagctctgttcttgtggaacaacgagca 1497
>ref|NM_113060.3| Arabidopsis thaliana protein phosphatase type 2A regulator AT3G21650 mRNA, complete cds Length = 2336 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 1832 catttccaggttgctgaaagagcattgtttctatggaacaacga 1875
>ref|NM_101216.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT1G13460 transcript variant AT1G13460.1 mRNA, complete cds Length = 1870 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 |||||||||||||| |||||||| || ||| | ||||||||||| Sbjct: 1398 cattttcaggttgcagaaagagctttgttcttatggaacaacga 1441
>ref|NM_202087.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT1G13460 transcript variant AT1G13460.2 mRNA, complete cds Length = 1951 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 |||||||||||||| |||||||| || ||| | ||||||||||| Sbjct: 1479 cattttcaggttgcagaaagagctttgttcttatggaacaacga 1522
>gb|AY085069.1| Arabidopsis thaliana clone 126195 mRNA, complete sequence Length = 1869 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 |||||||||||||| |||||||| || ||| | ||||||||||| Sbjct: 1397 cattttcaggttgcagaaagagctttgttcttatggaacaacga 1440
>ref|NM_111823.2| Arabidopsis thaliana ATB' BETA; protein phosphatase type 2A regulator AT3G09880 (ATB' BETA) mRNA, complete cds Length = 2216 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagcac 366 |||||| || ||||||||||| ||| |||| | ||| ||||||||||||||||| Sbjct: 1537 tagctcccactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac 1591
>gb|AY113852.1| Arabidopsis thaliana putative B' regulatory subunit of PP2A AtB'beta (At3g09880) mRNA, complete cds Length = 1531 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagcac 366 |||||| || ||||||||||| ||| |||| | ||| ||||||||||||||||| Sbjct: 1146 tagctcccactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac 1200
>gb|AY072226.1| Arabidopsis thaliana putative B' regulatory subunit of PP2A AtB'beta (At3g09880) mRNA, complete cds Length = 1994 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagcac 366 |||||| || ||||||||||| ||| |||| | ||| ||||||||||||||||| Sbjct: 1537 tagctcccactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac 1591
>emb|BX824074.1|CNS0A5MU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2112 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagcac 366 |||||| || ||||||||||| ||| |||| | ||| ||||||||||||||||| Sbjct: 1529 tagctcccactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac 1583
>dbj|AB019232.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIL23 Length = 80818 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 324 tcaggttgctgaaagagccttattcctgtggaacaacga 362 |||||||||||||||||| || || || ||||||||||| Sbjct: 59770 tcaggttgctgaaagagcattgtttctatggaacaacga 59732
>gb|U73527.1|ATU73527 Arabidopsis thaliana B' regulatory subunit of PP2A (AtB'beta) mRNA, complete cds Length = 2207 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagccttattcctgtggaacaacgagcac 366 |||||| || ||||||||||| ||| |||| | ||| ||||||||||||||||| Sbjct: 1514 tagctcccactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac 1568
>ref|NM_113506.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT3G26020 transcript variant AT3G26020.1 mRNA, complete cds Length = 2214 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaac 360 |||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 1616 cattttcaggttgcagagagagctttattcttatggaacaac 1657
>ref|NM_001035693.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT3G26020 transcript variant AT3G26020.2 mRNA, complete cds Length = 2491 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaac 360 |||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 1799 cattttcaggttgcagagagagctttattcttatggaacaac 1840
>ref|XM_421412.1| PREDICTED: Gallus gallus similar to epsilon isoform of regulatory subunit B56, protein phosphatase 2A; PP2A, B subunit, B epsilon isoform; PP2A, B subunit, B56 epsilon isoform; PP2A, B subunit, PR61 epsilon isoform; PP2A, B subunit, R5 epsilon isoform; Serine/threonine pro... (LOC423512), mRNA Length = 2545 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 312 tagctctcattttcaggttgctgaaagagc 341 |||| ||||||||||||| ||||||||||| Sbjct: 2079 tagccctcattttcaggtggctgaaagagc 2108
>gb|AY093761.1| Arabidopsis thaliana AT4g15410/dl3750w mRNA, complete cds Length = 2408 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||| ||||||||||| |||||||| || |||| || ||||||||||| Sbjct: 1720 agctcacattttcaggtggctgaaagggctctatttctatggaacaacga 1769
>gb|AY059158.1| Arabidopsis thaliana AT3g26020/MPE11_17 mRNA, complete cds Length = 1533 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaac 360 |||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 1219 cattttcaggttgcagagagagctttattcttatggaacaac 1260
>gb|AF367267.1|AF367267 Arabidopsis thaliana AT3g26020/MPE11_17 mRNA, complete cds Length = 2224 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaac 360 |||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 1616 cattttcaggttgcagagagagctttattcttatggaacaac 1657
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 224 agttggaggaggtgctggaattgacagaaa 253 ||||||||||||||||| ||||||||||| Sbjct: 11555394 agttggaggaggtgctgctattgacagaaa 11555423
>emb|BX825784.1|CNS0A56T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaac 360 |||||||||||||| |||||||| ||||| | ||||||||| Sbjct: 44 cattttcaggttgcagaaagagctttatttttatggaacaac 85
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 224 agttggaggaggtgctggaattgacagaaa 253 ||||||||||||||||| ||||||||||| Sbjct: 11555065 agttggaggaggtgctgctattgacagaaa 11555094
>emb|AL772424.5|CNS08CA2 Oryza sativa chromosome 12, . BAC OJ1118_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108927 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 224 agttggaggaggtgctggaattgacagaaa 253 ||||||||||||||||| ||||||||||| Sbjct: 105434 agttggaggaggtgctgctattgacagaaa 105405
>gb|BC075466.1| Xenopus tropicalis PPP2R5E protein, mRNA (cDNA clone IMAGE:6976866), partial cds Length = 1638 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 tctcattttcaggttgctgaaagagcctt 344 ||||||||||||||||| ||| ||||||| Sbjct: 1361 tctcattttcaggttgcagaacgagcctt 1389
>gb|BC059026.1| Mus musculus protein phosphatase 2, regulatory subunit B (B56), alpha isoform, mRNA (cDNA clone MGC:69757 IMAGE:6810754), complete cds Length = 3099 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 1709 agctctcatttccaggttgcagaaagagc 1737
>gb|AE013042.1| Thermoanaerobacter tengcongensis MB4, section 69 of 244 of the complete genome Length = 11341 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 actgcttgaatagctctcatt 322 ||||||||||||||||||||| Sbjct: 7732 actgcttgaatagctctcatt 7752
>gb|BC023062.1| Mus musculus protein phosphatase 2, regulatory subunit B (B56), alpha isoform, mRNA (cDNA clone IMAGE:5359803), complete cds Length = 1661 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 279 agctctcatttccaggttgcagaaagagc 307
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 cagaagctgctgttggcttgt 528 ||||||||||||||||||||| Sbjct: 848403 cagaagctgctgttggcttgt 848423
>ref|XM_001001460.1| PREDICTED: Mus musculus protein phosphatase 2, regulatory subunit B (B56), alpha isoform, transcript variant 2 (Ppp2r5a), mRNA Length = 2318 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 938 agctctcatttccaggttgcagaaagagc 966
>ref|XM_983388.1| PREDICTED: Mus musculus protein phosphatase 2, regulatory subunit B (B56), alpha isoform, transcript variant 7 (Ppp2r5a), mRNA Length = 2652 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 1269 agctctcatttccaggttgcagaaagagc 1297
>ref|XM_983427.1| PREDICTED: Mus musculus protein phosphatase 2, regulatory subunit B (B56), alpha isoform, transcript variant 2 (Ppp2r5a), mRNA Length = 3020 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 1637 agctctcatttccaggttgcagaaagagc 1665
>emb|CT030371.1| Xenopus tropicalis finished cDNA, clone TEgg085i15 Length = 1638 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 tctcattttcaggttgctgaaagagcctt 344 ||||||||||||||||| ||| ||||||| Sbjct: 1375 tctcattttcaggttgcagaacgagcctt 1403
>ref|XM_661235.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30039) partial mRNA Length = 3543 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 aatttgcaagaggaggaagag 555 ||||||||||||||||||||| Sbjct: 2818 aatttgcaagaggaggaagag 2798
>gb|BC034058.1| Mus musculus mRNA similar to hypothetical protein MGC38798 (cDNA clone IMAGE:4160733) Length = 1514 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 151 agctctcatttccaggttgcagaaagagc 123
>dbj|AK145397.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I0C0036K03 product:protein phosphatase 2, regulatory subunit B (B56), alpha isoform, full insert sequence Length = 2468 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 1095 agctctcatttccaggttgcagaaagagc 1123
>gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, complete sequence Length = 159838 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 caagaggaggaagagaagcaa 561 ||||||||||||||||||||| Sbjct: 127628 caagaggaggaagagaagcaa 127608
>tpg|BK000647.1| TPA: TPA_exp: Mus musculus protein phosphatase 2A regulatory subunit PR61alpha mRNA, complete cds Length = 2626 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 1248 agctctcatttccaggttgcagaaagagc 1276
>emb|BX813834.1|CNS0ACB0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1786 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaa 359 |||||||||||||| |||||||| || ||| | |||||||| Sbjct: 1379 cattttcaggttgcagaaagagctttgttcttatggaacaa 1419
>gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 11 through 24, and complete cds Length = 150000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 caagaggaggaagagaagcaa 561 ||||||||||||||||||||| Sbjct: 118161 caagaggaggaagagaagcaa 118141
>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence Length = 171834 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 caagaggaggaagagaagcaa 561 ||||||||||||||||||||| Sbjct: 101150 caagaggaggaagagaagcaa 101130
>ref|NM_144880.3| Mus musculus protein phosphatase 2, regulatory subunit B (B56), alpha isoform (Ppp2r5a), mRNA Length = 3099 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 agctctcattttcaggttgctgaaagagc 341 ||||||||||| |||||||| |||||||| Sbjct: 1709 agctctcatttccaggttgcagaaagagc 1737
>ref|NM_117630.2| Arabidopsis thaliana protein phosphatase type 2A regulator AT4G15415 transcript variant AT4G15415.1 mRNA, complete cds Length = 2433 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||||| |||||||| || |||| || ||||||||||| Sbjct: 1703 cattttcaggtggctgaaagggctctatttctatggaacaacga 1746
>ref|NM_179059.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT4G15415 transcript variant AT4G15415.2 mRNA, complete cds Length = 2456 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||||| |||||||| || |||| || ||||||||||| Sbjct: 1726 cattttcaggtggctgaaagggctctatttctatggaacaacga 1769
>gb|BC073627.1| Xenopus laevis hypothetical protein LOC443678, mRNA (cDNA clone IMAGE:5514810), partial cds Length = 3418 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 ttatcttgccaatcatatat 417 |||||||||||||||||||| Sbjct: 480 ttatcttgccaatcatatat 461
>gb|AC140786.3| Mus musculus BAC clone RP23-455E11 from chromosome 3, complete sequence Length = 174791 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tgttgaagtactggccagtg 189 |||||||||||||||||||| Sbjct: 165435 tgttgaagtactggccagtg 165454
>gb|AC112274.4| Mus musculus BAC clone RP24-125F23 from chromosome 10, complete sequence Length = 144435 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ccagaagtgcatggtcccattgtt 287 |||| ||||||||||||||||||| Sbjct: 130796 ccaggagtgcatggtcccattgtt 130773
>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence Length = 174491 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaattgacagaaatgcctg 259 |||||||||||||||||||| Sbjct: 65565 ggaattgacagaaatgcctg 65546
>gb|AC155929.6| Mus musculus BAC clone RP24-75H6 from chromosome 10, complete sequence Length = 191193 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ccagaagtgcatggtcccattgtt 287 |||| ||||||||||||||||||| Sbjct: 105781 ccaggagtgcatggtcccattgtt 105804
>emb|AL033378.12|HS323M4 Human DNA sequence from clone RP3-323M4 on chromosome 6q24.1-25.2 Contains part of the gene for KIAA0790 protein, a cytochrome p450 51 (lanosterol 14-alpha-demethylase) (CYP51) pseudogene, a small nuclear ribonucleoprotein polypeptide E (SNRPE) pseudogene and a CpG island, complete sequence Length = 151938 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tggatcagaagctgctgttg 522 |||||||||||||||||||| Sbjct: 109667 tggatcagaagctgctgttg 109686
>gb|AC138664.17| Mus musculus chromosome 3, clone RP24-289J19, complete sequence Length = 151691 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaggagcataaattatttct 44 |||||||||||||||||||| Sbjct: 83317 gaggagcataaattatttct 83298
>gb|AC084052.9| Mus Musculus Strain C57BL6/J chromosome 3 RP23-43D3, complete sequence Length = 134464 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tgttgaagtactggccagtg 189 |||||||||||||||||||| Sbjct: 103499 tgttgaagtactggccagtg 103518
>ref|NM_168832.1| Drosophila melanogaster CG32224-RA (CG32224), mRNA Length = 999 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cagaaatgcctgagttccag 267 |||||||||||||||||||| Sbjct: 867 cagaaatgcctgagttccag 848
>ref|NM_140932.1| Drosophila melanogaster CG6996-RA (CG6996), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cagaaatgcctgagttccag 267 |||||||||||||||||||| Sbjct: 175 cagaaatgcctgagttccag 194
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179283 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cagaaatgcctgagttccag 267 |||||||||||||||||||| Sbjct: 137182 cagaaatgcctgagttccag 137201
>gb|AC006448.14|AC006448 Homo sapiens chromosome 17, clone RP11-423M11, complete sequence Length = 127587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcattttcaggttgctgaaa 337 |||||||||||||||||||| Sbjct: 72606 tcattttcaggttgctgaaa 72587
>gb|BC094151.1| Xenopus laevis hypothetical protein LOC443678, mRNA (cDNA clone MGC:115090 IMAGE:6639985), complete cds Length = 2928 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 ttatcttgccaatcatatat 417 |||||||||||||||||||| Sbjct: 526 ttatcttgccaatcatatat 507
>gb|AC007432.9|AC007432 Homo sapiens chromosome 17, clone RP11-166M16, complete sequence Length = 158045 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tcattttcaggttgctgaaa 337 |||||||||||||||||||| Sbjct: 11405 tcattttcaggttgctgaaa 11424
>gb|AF137231.1|AF137231 Lampris sp. mixed lineage leukemia-like protein (Mll) gene, partial cds Length = 954 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tgttcttgggggagttggaggagg 235 |||||||| ||||||||||||||| Sbjct: 688 tgttcttgtgggagttggaggagg 665
>emb|CR931761.6| Zebrafish DNA sequence from clone DKEY-27P1 in linkage group 10, complete sequence Length = 151872 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cataaattatttctgtggaa 50 |||||||||||||||||||| Sbjct: 135230 cataaattatttctgtggaa 135249
>gb|AC006599.2|AC006599 Homo sapiens PAC clone pDJ593b2, complete sequence Length = 83871 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tggatcagaagctgctgttg 522 |||||||||||||||||||| Sbjct: 50719 tggatcagaagctgctgttg 50700
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete sequence Length = 299903 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cagaaatgcctgagttccag 267 |||||||||||||||||||| Sbjct: 180199 cagaaatgcctgagttccag 180218
>gb|BT020581.1| Arabidopsis thaliana At4g15415 gene, complete cds Length = 1694 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||||| |||||||| || |||| || ||||||||||| Sbjct: 1221 cattttcaggtggctgaaagggctctatttctatggaacaacga 1264
>gb|AC110171.29| Mus musculus chromosome 12, clone RP23-400A5, complete sequence Length = 188590 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gtgatcagaggcctgttgaa 176 |||||||||||||||||||| Sbjct: 83636 gtgatcagaggcctgttgaa 83617
>gb|U73528.1|ATU73528 Arabidopsis thaliana B' regulatory subunit of PP2A (AtB'gamma) mRNA, complete cds Length = 2207 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 cattttcaggttgctgaaagagccttattcctgtggaacaacga 362 ||||||||||| |||||||| || |||| || ||||||||||| Sbjct: 1598 cattttcaggtggctgaaagggctctatttctatggaacaacga 1641
>gb|AY940683.1| Zea mays protein phosphatase 2A regulatory subunit B' mRNA, complete cds Length = 1944 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 tgaatagctctcattttcaggttgctga 335 |||||||||| || |||||||||||||| Sbjct: 1316 tgaatagctcacactttcaggttgctga 1343 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,314,877 Number of Sequences: 3902068 Number of extensions: 6314877 Number of successful extensions: 140553 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140219 Number of HSP's gapped (non-prelim): 326 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)