ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37i08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009069.1| Triticum aestivum clone wia1c.pk001.d20:fis, full insert mRNA sequence Length = 1535 Score = 1072 bits (541), Expect = 0.0 Identities = 571/581 (98%) Strand = Plus / Plus Query: 11 ccaccgttaccacagcgtccacctacctgtcctccgcctagagaagcgtcggcgaggcca 70 |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 13 ccaccggtaccacagcgtccacctacccgtcctccgcctcgagaagcgtcggcgaggcca 72 Query: 71 tggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaagc 130 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 73 tggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctgaagc 132 Query: 131 gcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttca 190 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 133 gcctcgcaggcatcgacctccagatcctctccgcgcaggtcacacaatcaacggatttca 192 Query: 191 cggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgaca 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 cggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgaca 252 Query: 251 tgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgctcaag 310 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 253 tgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcgtgctcaag 312 Query: 311 tccgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaaggctc 370 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 313 tccgccaatttgtcaaggagcgattaggagttgaggtcgagatgggtggatgtaaggctc 372 Query: 371 caattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctctcaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 caattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctctcaa 432 Query: 431 ttgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgagattg 490 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ttatgtcagacaggcttggttgcaccattagtttctcagagtgtggtggtattgagattg 492 Query: 491 aggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgacacttg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 aggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgacacttg 552 Query: 551 atgcatgtgctccattgattgccactcttcccttggaagtc 591 ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 553 atgcatgcgctccattgattgccactcttcccttggaagtc 593
>gb|AY108793.1| Zea mays PCO080711 mRNA sequence Length = 1790 Score = 638 bits (322), Expect = e-180 Identities = 460/506 (90%) Strand = Plus / Plus Query: 70 atggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaag 129 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 198 atggcgcggaagaagatccgggagtacgactccaagcgcctcctccgggagcacctcaag 257 Query: 130 cgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttc 189 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 258 cgcctcgccggcatcgacctccagatcctctccgcgcaggtcacacagtcaacggatttc 317 Query: 190 acggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgac 249 || |||||| ||||||||||||| |||||||| || |||||||||||||| ||||||||| Sbjct: 318 actgagcttgcaaaccaggagccgtggctctcatctatgaagttggttgtgaaacctgac 377 Query: 250 atgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgctcaa 309 ||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 378 atgctctttgggaaacgtgggaagagtgggcttgtggccctcaacctagatcttgcccaa 437 Query: 310 gtccgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaaggct 369 || ||||||||||||||||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 438 gttcgccaatttgtcaaggagcggttgggagttgaggtcgagatgggtggctgcaaagct 497 Query: 370 ccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctctca 429 ||||||||||| |||||||| || |||||||||||||| || |||||||| || || || Sbjct: 498 ccaattacaaccttcatagttgaaccatttgtgccacatgaccaagagtactacctttcg 557 Query: 430 attgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgagatt 489 ||||| || || |||||||| ||| |||||||||||||| ||||| ||||||||||| Sbjct: 558 attgtatctgaaaggcttggcaacaccattagtttctcagaatgtggaggtattgagatc 617 Query: 490 gaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgacactt 549 |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | Sbjct: 618 gaggagaactgggacaaggttaagactatctttcttcccacagagaagcaaatgacacct 677 Query: 550 gatgcatgtgctccattgattgccac 575 || ||||||||||||||||||||||| Sbjct: 678 gacgcatgtgctccattgattgccac 703
>gb|BT016561.1| Zea mays clone Contig394 mRNA sequence Length = 1630 Score = 624 bits (315), Expect = e-176 Identities = 456/503 (90%) Strand = Plus / Plus Query: 73 gcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaagcgc 132 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 85 gcgcggaagaagatccgggagtacgactccaagcgcctcctccgggagcacctcaagcgc 144 Query: 133 ctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttcacg 192 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 145 ctcgccggcatcgacctccagatcctctccgcgcaggtcacacagtcaacggatttcact 204 Query: 193 gagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgacatg 252 |||||| ||||||||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 205 gagcttgcaaaccaggagccgtggctctcatctatgaagttggttgtgaaacctgacatg 264 Query: 253 ctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgctcaagtc 312 || ||||| || |||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 265 ctctttgggaaacgtgggaagagtgggcttgtggccctcaacctagatcttgcccaagtt 324 Query: 313 cgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaaggctcca 372 ||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 325 cgccaatttgtcaaggagcggttgggagttgaggtcgagatgggtggctgcaaagctcca 384 Query: 373 attacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctctcaatt 432 |||||||| |||||||| || |||||||||||||| || |||||||| || || || ||| Sbjct: 385 attacaaccttcatagttgaaccatttgtgccacatgaccaagagtactacctttcgatt 444 Query: 433 gtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgagattgag 492 || || || |||||||| ||| |||||||||||||| ||||| |||||||||| ||| Sbjct: 445 gtatctgaaaggcttggcaacaccattagtttctcagaatgtggacgtattgagatcgag 504 Query: 493 gagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgacacttgat 552 ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||| Sbjct: 505 gagaactgggacaaggttaagactatctttcttcccacagagaagcaaatgacacctgac 564 Query: 553 gcatgtgctccattgattgccac 575 ||||||||||||||||||||||| Sbjct: 565 gcatgtgctccattgattgccac 587
>dbj|AK062236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E02, full insert sequence Length = 1613 Score = 597 bits (301), Expect = e-167 Identities = 457/509 (89%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 134 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctc 193 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggat 186 ||||||||||| | |||||||||||| ||||||||||| ||||| || ||||||| ||| Sbjct: 194 aagcgcctcgccgccatcgacctccacatcctctccgcccaggtcacggaatcaactgat 253 Query: 187 ttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacct 246 ||||| ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 254 ttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttggttgtgaaaccc 313 Query: 247 gacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgct 306 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 314 gacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacctagatcttgct 373 Query: 307 caagtccgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaag 366 |||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 374 caagtccgccaattcgtcaaagagcggttgggagttgaggttgagatgggtggctgcaag 433 Query: 367 gctccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctc 426 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 434 gctcctattacaacattcatagttgagccatttgttccacatgatcaagagtactatctt 493 Query: 427 tcaattgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgag 486 || ||||| ||||| |||||||||| ||| ||||| ||||| |||||||| ||||||||| Sbjct: 494 tctattgtatcagagaggcttggttccaccattagcttctcggagtgtggaggtattgag 553 Query: 487 attgaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgaca 546 || |||||||||||||| ||||| |||||| | |||||||| || ||||| |||||||| Sbjct: 554 atcgaggagaactgggataaggtcaagacagtttttcttcccaccgagaaagcaatgaca 613 Query: 547 cttgatgcatgtgctccattgattgccac 575 | |||||| |||||||||||||||||||| Sbjct: 614 cctgatgcgtgtgctccattgattgccac 642
>dbj|AK071114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078F10, full insert sequence Length = 1739 Score = 589 bits (297), Expect = e-165 Identities = 456/509 (89%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 135 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctc 194 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggat 186 ||||||||||| | |||||||||||| ||||||||||| ||||| || ||||||| ||| Sbjct: 195 aagcgcctcgccgccatcgacctccacatcctctccgcccaggtcacggaatcaactgat 254 Query: 187 ttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacct 246 ||||| ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 255 ttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttggttgtgaaaccc 314 Query: 247 gacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgct 306 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 315 gacatgctatttggcaaacgtgggaagagtggccttgtggccctcaacctagatcttgct 374 Query: 307 caagtccgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaag 366 |||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 375 caagtccgccaattcgtcaaagagcggttgggagttgaggttgagatgggtggctgcaag 434 Query: 367 gctccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctc 426 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 435 gctcctattacaacattcatagttgagccatttgttccacatgatcaagagtactatctt 494 Query: 427 tcaattgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgag 486 || ||||| ||||| |||||||||| ||| ||||| ||||| |||||||| ||||||||| Sbjct: 495 tctattgtatcagagaggcttggttccaccattagcttctcggagtgtggaggtattgag 554 Query: 487 attgaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgaca 546 || |||||||||||||| ||||| |||||| | |||||||| || ||||| |||||||| Sbjct: 555 atcgaggagaactgggataaggtcaagacagtttttcttcccaccgagaaagcaatgaca 614 Query: 547 cttgatgcatgtgctccattgattgccac 575 | |||||| |||||||||||||||||||| Sbjct: 615 cctgatgcgtgtgctccattgattgccac 643
>dbj|AK069911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038A05, full insert sequence Length = 1616 Score = 454 bits (229), Expect = e-124 Identities = 448/521 (85%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 190 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggat 186 ||||||||||| || ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 191 aagcgcctcgccggtatcgacctccagatcctctccgcccaggttacacaatcgacggac 250 Query: 187 ttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacct 246 ||||| ||||| ||||||| |||||||||| || | ||||||||||| || || || Sbjct: 251 ttcacagagctggtaaaccagcagccatggctgtcaaccatgaagttggtcgtgaagccc 310 Query: 247 gacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgct 306 ||||||||||| || |||||||| ||||| || ||||| ||||||||||||||| ||||| Sbjct: 311 gacatgctgttcgggaagcgtggcaagagcggacttgtggccctcaacctagatattgct 370 Query: 307 caagtccgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaag 366 |||||| | ||||| |||||| || | ||||||||||||||||||||||| || ||| Sbjct: 371 caagtcaaggagtttgtgaaggagaggctgggagttgaggtcgagatgggtggctgcaag 430 Query: 367 gctccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctc 426 |||||||| || || ||||| || ||||||||||| || || |||||||| || || || Sbjct: 431 gctccaatcaccaccttcattgtggagccatttgtaccccatgatcaagaatactacctt 490 Query: 427 tcaattgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgag 486 || ||||| || || ||||| || |||| ||||| ||||| || ||||| || || || Sbjct: 491 tctattgtctcggagaggctgggcagcaccattagcttctcggaatgtggaggaatagaa 550 Query: 487 attgaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgaca 546 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 551 attgaggagaactgggacaaggttaagacaatttttcttcccactgagaagccaatgaca 610 Query: 547 cttgatgcatgtgctccattgattgccactcttcccttgga 587 | ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 611 cctgatgcatgtgctcccttgattgctacccttccattgga 651
>dbj|AK061978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A05, full insert sequence Length = 1611 Score = 454 bits (229), Expect = e-124 Identities = 448/521 (85%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 196 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggat 186 ||||||||||| || ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 197 aagcgcctcgccggtatcgacctccagatcctctccgcccaggttacacaatcgacggac 256 Query: 187 ttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacct 246 ||||| ||||| ||||||| |||||||||| || | ||||||||||| || || || Sbjct: 257 ttcacagagctggtaaaccagcagccatggctgtcaaccatgaagttggtcgtgaagccc 316 Query: 247 gacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgct 306 ||||||||||| || |||||||| ||||| || ||||| ||||||||||||||| ||||| Sbjct: 317 gacatgctgttcgggaagcgtggcaagagcggacttgtggccctcaacctagatattgct 376 Query: 307 caagtccgccaatttgtcaaggagcggttaggagttgaggtcgagatgggtggatgtaag 366 |||||| | ||||| |||||| || | ||||||||||||||||||||||| || || Sbjct: 377 caagtcaaggagtttgtgaaggagaggctgggagttgaggtcgagatgggtggctgcaaa 436 Query: 367 gctccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctc 426 |||||||| || || ||||| || ||||||||||| || || |||||||| || || || Sbjct: 437 gctccaatcaccaccttcattgtggagccatttgtaccccatgatcaagaatactacctt 496 Query: 427 tcaattgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgag 486 || ||||| || || ||||| || |||| ||||| |||||||||||||| || || || Sbjct: 497 tctattgtctcggagaggctgggcagcaccattagcttctcagagtgtggaggaatagaa 556 Query: 487 attgaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgaca 546 |||||||||||||||||||||||||||||||| |||||| | || ||||||||||||||| Sbjct: 557 attgaggagaactgggacaaggttaagacaatttttctttccactgagaagccaatgaca 616 Query: 547 cttgatgcatgtgctccattgattgccactcttcccttgga 587 | ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 617 cctgatgcatgtgctcccttgattgctacccttccattgga 657
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 238 bits (120), Expect = 2e-59 Identities = 204/232 (87%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||| ||||||||||| || |||||||| ||||||||||||||||| ||||||||||| | Sbjct: 23310471 aggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttc 23310530 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 |||| ||||||||||| ||||| || ||||| ||||| |||||||||| ||| ||||| | Sbjct: 23310531 cacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagct 23310590 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 |||| |||||||| ||||||||||| |||||||||||||| ||||| |||||| | |||| Sbjct: 23310591 tctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttc 23310650 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccac 575 |||| || ||||| ||||||||| |||||| |||||||||||||||||||| Sbjct: 23310651 ttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgccac 23310702 Score = 222 bits (112), Expect = 1e-54 Identities = 157/172 (91%) Strand = Plus / Plus Query: 176 aatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttgg 235 ||||||| |||||||| ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 23310219 aatcaactgatttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttgg 23310278 Query: 236 ttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacc 295 |||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 23310279 ttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacc 23310338 Query: 296 tagatcttgctcaagtccgccaatttgtcaaggagcggttaggagttgaggt 347 ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 23310339 tagatcttgctcaagtccgccaattcgtcaaagagcggttgggagttgaggt 23310390 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23308990 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctc 23309049 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| | |||||||||||| ||||||||||| ||||| Sbjct: 23309050 aagcgcctcgccgccatcgacctccacatcctctccgcccaggt 23309093
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 238 bits (120), Expect = 2e-59 Identities = 204/232 (87%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||| ||||||||||| || |||||||| ||||||||||||||||| ||||||||||| | Sbjct: 23238662 aggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttc 23238721 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 |||| ||||||||||| ||||| || ||||| ||||| |||||||||| ||| ||||| | Sbjct: 23238722 cacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagct 23238781 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 |||| |||||||| ||||||||||| |||||||||||||| ||||| |||||| | |||| Sbjct: 23238782 tctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttc 23238841 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccac 575 |||| || ||||| ||||||||| |||||| |||||||||||||||||||| Sbjct: 23238842 ttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgccac 23238893 Score = 222 bits (112), Expect = 1e-54 Identities = 157/172 (91%) Strand = Plus / Plus Query: 176 aatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttgg 235 ||||||| |||||||| ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 23238410 aatcaactgatttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttgg 23238469 Query: 236 ttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacc 295 |||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 23238470 ttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacc 23238529 Query: 296 tagatcttgctcaagtccgccaatttgtcaaggagcggttaggagttgaggt 347 ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 23238530 tagatcttgctcaagtccgccaattcgtcaaagagcggttgggagttgaggt 23238581 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23237181 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctc 23237240 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| | |||||||||||| ||||||||||| ||||| Sbjct: 23237241 aagcgcctcgccgccatcgacctccacatcctctccgcccaggt 23237284
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 238 bits (120), Expect = 2e-59 Identities = 204/232 (87%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||| ||||||||||| || |||||||| ||||||||||||||||| ||||||||||| | Sbjct: 123589 aggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttc 123648 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 |||| ||||||||||| ||||| || ||||| ||||| |||||||||| ||| ||||| | Sbjct: 123649 cacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagct 123708 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 |||| |||||||| ||||||||||| |||||||||||||| ||||| |||||| | |||| Sbjct: 123709 tctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttc 123768 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccac 575 |||| || ||||| ||||||||| |||||| |||||||||||||||||||| Sbjct: 123769 ttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgccac 123820 Score = 222 bits (112), Expect = 1e-54 Identities = 157/172 (91%) Strand = Plus / Plus Query: 176 aatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttgg 235 ||||||| |||||||| ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 123337 aatcaactgatttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttgg 123396 Query: 236 ttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacc 295 |||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 123397 ttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacc 123456 Query: 296 tagatcttgctcaagtccgccaatttgtcaaggagcggttaggagttgaggt 347 ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 123457 tagatcttgctcaagtccgccaattcgtcaaagagcggttgggagttgaggt 123508 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 122108 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctc 122167 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| | |||||||||||| ||||||||||| ||||| Sbjct: 122168 aagcgcctcgccgccatcgacctccacatcctctccgcccaggt 122211
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 198 bits (100), Expect = 1e-47 Identities = 208/244 (85%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||||||| || ||||||||||| || || ||||| || ||||||||||| | Sbjct: 8408 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 8467 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || || || ||||| || || ||||| || |||| ||||| | Sbjct: 8468 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 8527 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 8528 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 8587 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccct 583 || | || |||||||||||||||| ||||||||||||||| |||||||| || ||||| | Sbjct: 8588 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgctacccttccat 8647 Query: 584 tgga 587 |||| Sbjct: 8648 tgga 8651 Score = 174 bits (88), Expect = 2e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7200 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 7259 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 7260 aagcgcctcgccggtatcgacctccagatcctctccgcccaggt 7303 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||| |||||||| ||||| ||||| ||||| ||||||| |||||||||| || | | Sbjct: 8141 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 8200 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 |||||||||| || || || ||||||||||| || |||||||| ||||| || ||||| | Sbjct: 8201 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 8260 Query: 287 ccctcaacctagatcttgctcaagtc 312 |||||||||||||| ||||||||||| Sbjct: 8261 ccctcaacctagatattgctcaagtc 8286
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 198 bits (100), Expect = 1e-47 Identities = 208/244 (85%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||||||| || ||||||||||| || || ||||| || ||||||||||| | Sbjct: 132106 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 132165 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || || || ||||| || || ||||| || |||| ||||| | Sbjct: 132166 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 132225 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 132226 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 132285 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccct 583 || | || |||||||||||||||| ||||||||||||||| |||||||| || ||||| | Sbjct: 132286 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgctacccttccat 132345 Query: 584 tgga 587 |||| Sbjct: 132346 tgga 132349 Score = 174 bits (88), Expect = 2e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130898 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 130957 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 130958 aagcgcctcgccggtatcgacctccagatcctctccgcccaggt 131001 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||| |||||||| ||||| ||||| ||||| ||||||| |||||||||| || | | Sbjct: 131839 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 131898 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 |||||||||| || || || ||||||||||| || |||||||| ||||| || ||||| | Sbjct: 131899 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 131958 Query: 287 ccctcaacctagatcttgctcaagtc 312 |||||||||||||| ||||||||||| Sbjct: 131959 ccctcaacctagatattgctcaagtc 131984
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 198 bits (100), Expect = 1e-47 Identities = 208/244 (85%) Strand = Plus / Minus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||||||| || ||||||||||| || || ||||| || ||||||||||| | Sbjct: 27713565 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27713506 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || || || ||||| || || ||||| || |||| ||||| | Sbjct: 27713505 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27713446 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 27713445 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27713386 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccct 583 || | || |||||||||||||||| ||||||||||||||| |||||||| || ||||| | Sbjct: 27713385 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgctacccttccat 27713326 Query: 584 tgga 587 |||| Sbjct: 27713325 tgga 27713322 Score = 190 bits (96), Expect = 4e-45 Identities = 207/244 (84%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||||||| || ||||||||||| || || ||||| || ||||||||||| | Sbjct: 27852038 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27852097 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || || || ||||| || || ||||| || |||| ||||| | Sbjct: 27852098 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27852157 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 |||| || ||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 27852158 tctcggaatgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27852217 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccct 583 |||| || |||||||||||||||| ||||||||||||||| |||||||| || ||||| | Sbjct: 27852218 ttcccactgagaagccaatgacacctgatgcatgtgctcccttgattgctacccttccat 27852277 Query: 584 tgga 587 |||| Sbjct: 27852278 tgga 27852281 Score = 174 bits (88), Expect = 2e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27850819 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 27850878 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 27850879 aagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27850922 Score = 174 bits (88), Expect = 2e-40 Identities = 100/104 (96%) Strand = Plus / Minus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27714773 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 27714714 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 27714713 aagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27714670 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||| |||||||| ||||| ||||| ||||| ||||||| |||||||||| || | | Sbjct: 27851771 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27851830 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 |||||||||| || || || ||||||||||| || |||||||| ||||| || ||||| | Sbjct: 27851831 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27851890 Query: 287 ccctcaacctagatcttgctcaagtc 312 |||||||||||||| ||||||||||| Sbjct: 27851891 ccctcaacctagatattgctcaagtc 27851916 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Minus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||| |||||||| ||||| ||||| ||||| ||||||| |||||||||| || | | Sbjct: 27713832 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27713773 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 |||||||||| || || || ||||||||||| || |||||||| ||||| || ||||| | Sbjct: 27713772 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27713713 Query: 287 ccctcaacctagatcttgctcaagtc 312 |||||||||||||| ||||||||||| Sbjct: 27713712 ccctcaacctagatattgctcaagtc 27713687
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 198 bits (100), Expect = 1e-47 Identities = 208/244 (85%) Strand = Plus / Minus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||||||| || ||||||||||| || || ||||| || ||||||||||| | Sbjct: 27737553 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27737494 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || || || ||||| || || ||||| || |||| ||||| | Sbjct: 27737493 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27737434 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 27737433 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27737374 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccct 583 || | || |||||||||||||||| ||||||||||||||| |||||||| || ||||| | Sbjct: 27737373 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgctacccttccat 27737314 Query: 584 tgga 587 |||| Sbjct: 27737313 tgga 27737310 Score = 190 bits (96), Expect = 4e-45 Identities = 207/244 (84%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||||||| || ||||||||||| || || ||||| || ||||||||||| | Sbjct: 27876026 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27876085 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || || || ||||| || || ||||| || |||| ||||| | Sbjct: 27876086 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27876145 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctttc 523 |||| || ||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 27876146 tctcggaatgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27876205 Query: 524 ttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccct 583 |||| || |||||||||||||||| ||||||||||||||| |||||||| || ||||| | Sbjct: 27876206 ttcccactgagaagccaatgacacctgatgcatgtgctcccttgattgctacccttccat 27876265 Query: 584 tgga 587 |||| Sbjct: 27876266 tgga 27876269 Score = 174 bits (88), Expect = 2e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27874807 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 27874866 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 27874867 aagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27874910 Score = 174 bits (88), Expect = 2e-40 Identities = 100/104 (96%) Strand = Plus / Minus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27738761 gccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 27738702 Query: 127 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggt 170 ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 27738701 aagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27738658 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||| |||||||| ||||| ||||| ||||| ||||||| |||||||||| || | | Sbjct: 27875759 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27875818 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 |||||||||| || || || ||||||||||| || |||||||| ||||| || ||||| | Sbjct: 27875819 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27875878 Query: 287 ccctcaacctagatcttgctcaagtc 312 |||||||||||||| ||||||||||| Sbjct: 27875879 ccctcaacctagatattgctcaagtc 27875904 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Minus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||| |||||||| ||||| ||||| ||||| ||||||| |||||||||| || | | Sbjct: 27737820 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27737761 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 |||||||||| || || || ||||||||||| || |||||||| ||||| || ||||| | Sbjct: 27737760 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27737701 Query: 287 ccctcaacctagatcttgctcaagtc 312 |||||||||||||| ||||||||||| Sbjct: 27737700 ccctcaacctagatattgctcaagtc 27737675
>gb|AY112471.1| Zea mays CL718_1 mRNA sequence Length = 1590 Score = 182 bits (92), Expect = 9e-43 Identities = 191/224 (85%) Strand = Plus / Plus Query: 364 aaggctccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattat 423 ||||||||||| || || ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 386 aaggctccaatcacgaccttcatcgtcgagccatttgtgccacatgatcaagagtactac 445 Query: 424 ctctcaattgtgtcagacaggcttggttgcacaattagtttctcagagtgtggtggtatt 483 || || ||||| ||||| ||| | || |||| || || |||||||||||||| || ||| Sbjct: 446 ctttcgattgtctcagagaggttgggcagcaccatcagcttctcagagtgtggagggatt 505 Query: 484 gagattgaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatg 543 |||||||||||||||||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 506 gagattgaggagaactgggacaaggttaagactattttccttcctactgagaagccaatg 565 Query: 544 acacttgatgcatgtgctccattgattgccactcttcccttgga 587 || |||| |||||||||| |||||||| || ||||| ||||| Sbjct: 566 acgtctgattcatgtgctcctttgattgcaacccttccattgga 609 Score = 182 bits (92), Expect = 9e-43 Identities = 191/224 (85%) Strand = Plus / Plus Query: 71 tggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaagc 130 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 93 tggcgcgcaagaagatccgggagtacgactccaagcgcctcctcagggagcacctcaagc 152 Query: 131 gcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttca 190 ||||||| |||||||||||| ||||||||||| ||| | || ||||||||||| ||| Sbjct: 153 gcctcgccggcatcgacctcaccatcctctccgcccagatcacgcaatcaacggacttcg 212 Query: 191 cggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgaca 250 |||||||| | |||| |||||||||| || | |||||| | || || || ||||| | Sbjct: 213 cggagcttgtgagccagcagccatggctgtcaaccatgaagctagtggtgaagcctgata 272 Query: 251 tgctgtttggcaagcgtgggaagagtggccttgtagccctcaac 294 ||||||| || |||||||||||||| ||||| || || |||||| Sbjct: 273 tgctgttcgggaagcgtgggaagagcggcctcgtggctctcaac 316
>gb|AY020401.1| Oryza sativa microsatellite MRG2726 containing (GA)X16, genomic sequence Length = 232 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 67 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctc 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 141 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctc 200 Query: 127 aagcgcctcgcaggcatcgacctccagatcct 158 ||||||||||| | |||||||||||| ||||| Sbjct: 201 aagcgcctcgccgccatcgacctccacatcct 232
>gb|BT014017.1| Lycopersicon esculentum clone 133079F, mRNA sequence Length = 1686 Score = 129 bits (65), Expect = 1e-26 Identities = 200/245 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| || |||||||| || ||||| || || |||||||| || || || |||||||| Sbjct: 532 gaggttgaaatgggtggctgcaaggcacctataacaacatttattgttgaaccatttgtt 591 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 || || || ||||| ||||| || || || || || || ||| | || ||||||||||| Sbjct: 592 ccccatgaccaagaatattacctttccatagtctctgaaaggttgggctgcacaattagc 651 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || ||||| ||||| || ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 652 ttttcagaatgtggaggcattgagattgaagagaactgggacaaggtcaagacaatattc 711 Query: 523 cttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttccc 582 |||||||| ||||| || ||||| || || || ||||||||| ||||||| ||||| ||| Sbjct: 712 cttccaacggagaaacctatgaccctagaggcgtgtgctccactgattgctactctgccc 771 Query: 583 ttgga 587 ||||| Sbjct: 772 ttgga 776 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 211 ccatggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtggg 270 |||||||| || |||| ||| ||||||| ||||| |||||||||||||| |||||||| Sbjct: 400 ccatggctttcatcgacaaagctggttgtaaaaccagacatgctgtttggaaagcgtgga 459 Query: 271 aagagtggc 279 ||||||||| Sbjct: 460 aagagtggc 468
>ref|NM_179303.1| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) transcript variant AT1G10670.2 mRNA, complete cds Length = 1528 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 348 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 407 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 408 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 467 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 468 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 527 Query: 523 cttccaacag 532 | ||||||| Sbjct: 528 ttaccaacag 537 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 219 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 278 Query: 274 agtgg 278 ||||| Sbjct: 279 agtgg 283
>ref|NM_100943.2| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) transcript variant AT1G10670.1 mRNA, complete cds Length = 1536 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 355 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 414 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 415 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 474 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 475 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 534 Query: 523 cttccaacag 532 | ||||||| Sbjct: 535 ttaccaacag 544 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 226 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 285 Query: 274 agtgg 278 ||||| Sbjct: 286 agtgg 290
>gb|AY113979.1| Arabidopsis thaliana putative ATP citrate-lyase (At1g10670) mRNA, complete cds Length = 1303 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 274 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 333 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 334 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 393 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 394 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 453 Query: 523 cttccaacag 532 | ||||||| Sbjct: 454 ttaccaacag 463 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 145 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 204 Query: 274 agtgg 278 ||||| Sbjct: 205 agtgg 209
>gb|AY056213.1| Arabidopsis thaliana putative ATP citrate-lyase (At1g10670) mRNA, complete cds Length = 1519 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 333 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 392 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 393 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 452 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 453 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 512 Query: 523 cttccaacag 532 | ||||||| Sbjct: 513 ttaccaacag 522 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 204 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 263 Query: 274 agtgg 278 ||||| Sbjct: 264 agtgg 268
>gb|AY094479.1| Arabidopsis thaliana At1g10670/F20B24_11 mRNA, complete cds Length = 1517 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 336 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 395 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 396 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 455 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 456 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 515 Query: 523 cttccaacag 532 | ||||||| Sbjct: 516 ttaccaacag 525 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 207 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 266 Query: 274 agtgg 278 ||||| Sbjct: 267 agtgg 271
>gb|AY056593.1| Arabidopsis thaliana ATP-citrate lyase subunit A mRNA, complete cds Length = 1517 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 324 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 383 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 384 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 443 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 444 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 503 Query: 523 cttccaacag 532 | ||||||| Sbjct: 504 ttaccaacag 513 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 195 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 254 Query: 274 agtgg 278 ||||| Sbjct: 255 agtgg 259
>gb|AY087536.1| Arabidopsis thaliana clone 36439 mRNA, complete sequence Length = 1532 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || |||||||||||||| || |||||||| Sbjct: 355 gaggtagagatgagtggatgcaaaggacccataacaacattcatagttgaaccatttgtt 414 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || | |||||||||||| |||| || || |||||||||||| || || Sbjct: 415 ccacacaatgaggagtattatctcaatgttgtctcggatcggcttggttgcagcataagc 474 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatcttt 522 || || |||||||| || |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 475 ttttctgagtgtggaggaattgagatcgaggagaactgggacaaggtcaagacaatattt 534 Query: 523 cttccaacag 532 | ||||||| Sbjct: 535 ttaccaacag 544 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 226 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 285 Query: 274 agtgg 278 ||||| Sbjct: 286 agtgg 290
>ref|NM_100814.2| Arabidopsis thaliana ACLA-3 AT1G09430 (ACLA-3) mRNA, complete cds Length = 1730 Score = 87.7 bits (44), Expect = 4e-14 Identities = 191/240 (79%) Strand = Plus / Plus Query: 342 tgaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgt 401 |||||||||||||| |||||||| || || || || |||||||| || ||||| ||||| Sbjct: 304 tgaggtcgagatggagggatgtaaagcacctatcactacattcattgtggagccttttgt 363 Query: 402 gccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattag 461 ||| || |||||||| || || ||||| || || || || || ||||| ||||| || || Sbjct: 364 gcctcatgatcaagaatactacctctctatagtatctgatagacttggatgcactataag 423 Query: 462 tttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctt 521 ||||| || |||||||| ||||| || || ||||| |||||||| || ||||| || || Sbjct: 424 cttctctgaatgtggtggcattgaaatagaagagaattgggacaaagtgaagactatatt 483 Query: 522 tcttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttcc 581 |||||| | || ||| | ||||| || || | |||||||||||| || || |||||||| Sbjct: 484 tcttcctgcggaaaagtcgatgacgctagaagtatgtgctccattaatagcaactcttcc 543 Score = 60.0 bits (30), Expect = 9e-06 Identities = 189/242 (78%) Strand = Plus / Plus Query: 70 atggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaag 129 |||||| ||||||||||| | || || ||||||||| | || ||||||||||| | ||| Sbjct: 32 atggcgaggaagaagatcagagaatatgactccaagagacttctcaaggagcatttgaag 91 Query: 130 cgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttc 189 || || || || ||||| ||||| | ||| || ||||||||| |||| ||||||||| Sbjct: 92 cgtcttgctaatattgacctgcagattcgctctgctcaggtgacagaatctacggatttc 151 Query: 190 acggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgac 249 || ||| | | ||||||||| ||||||| ||||| | ||| | ||||| ||||| || Sbjct: 152 actgagttaaccaaccaggagtcatggctatcgtccacaaagctagttgtgaaaccggat 211 Query: 250 atgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgctcaa 309 ||||| ||||| || || ||||| ||||| | ||||| || || || ||||||||| || Sbjct: 212 atgctatttgggaaacgcgggaaaagtggtttggtagctctaaagctggatcttgctgaa 271 Query: 310 gt 311 || Sbjct: 272 gt 273
>gb|AY127019.1| Arabidopsis thaliana At1g09430/F19J9_9 mRNA, complete cds Length = 1599 Score = 87.7 bits (44), Expect = 4e-14 Identities = 191/240 (79%) Strand = Plus / Plus Query: 342 tgaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgt 401 |||||||||||||| |||||||| || || || || |||||||| || ||||| ||||| Sbjct: 304 tgaggtcgagatggagggatgtaaagcacctatcactacattcattgtggagccttttgt 363 Query: 402 gccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattag 461 ||| || |||||||| || || ||||| || || || || || ||||| ||||| || || Sbjct: 364 gcctcatgatcaagaatactacctctctatagtatctgatagacttggatgcactataag 423 Query: 462 tttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctt 521 ||||| || |||||||| ||||| || || ||||| |||||||| || ||||| || || Sbjct: 424 cttctctgaatgtggtggcattgaaatagaagagaattgggacaaagtgaagactatatt 483 Query: 522 tcttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttcc 581 |||||| | || ||| | ||||| || || | |||||||||||| || || |||||||| Sbjct: 484 tcttcctgcggaaaagtcgatgacgctagaagtatgtgctccattaatagcaactcttcc 543 Score = 60.0 bits (30), Expect = 9e-06 Identities = 189/242 (78%) Strand = Plus / Plus Query: 70 atggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaag 129 |||||| ||||||||||| | || || ||||||||| | || ||||||||||| | ||| Sbjct: 32 atggcgaggaagaagatcagagaatatgactccaagagacttctcaaggagcatttgaag 91 Query: 130 cgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttc 189 || || || || ||||| ||||| | ||| || ||||||||| |||| ||||||||| Sbjct: 92 cgtcttgctaatattgacctgcagattcgctctgctcaggtgacagaatctacggatttc 151 Query: 190 acggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgac 249 || ||| | | ||||||||| ||||||| ||||| | ||| | ||||| ||||| || Sbjct: 152 actgagttaaccaaccaggagtcatggctatcgtccacaaagctagttgtgaaaccggat 211 Query: 250 atgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgctcaa 309 ||||| ||||| || || ||||| ||||| | ||||| || || || ||||||||| || Sbjct: 212 atgctatttgggaaacgcgggaaaagtggtttggtagctctaaagctggatcttgctgaa 271 Query: 310 gt 311 || Sbjct: 272 gt 273
>gb|BT003017.1| Arabidopsis thaliana At1g09430/F19J9_9 gene, complete cds Length = 1275 Score = 87.7 bits (44), Expect = 4e-14 Identities = 191/240 (79%) Strand = Plus / Plus Query: 342 tgaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgt 401 |||||||||||||| |||||||| || || || || |||||||| || ||||| ||||| Sbjct: 273 tgaggtcgagatggagggatgtaaagcacctatcactacattcattgtggagccttttgt 332 Query: 402 gccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattag 461 ||| || |||||||| || || ||||| || || || || || ||||| ||||| || || Sbjct: 333 gcctcatgatcaagaatactacctctctatagtatctgatagacttggatgcactataag 392 Query: 462 tttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatctt 521 ||||| || |||||||| ||||| || || ||||| |||||||| || ||||| || || Sbjct: 393 cttctctgaatgtggtggcattgaaatagaagagaattgggacaaagtgaagactatatt 452 Query: 522 tcttccaacagagaagccaatgacacttgatgcatgtgctccattgattgccactcttcc 581 |||||| | || ||| | ||||| || || | |||||||||||| || || |||||||| Sbjct: 453 tcttcctgcggaaaagtcgatgacgctagaagtatgtgctccattaatagcaactcttcc 512 Score = 60.0 bits (30), Expect = 9e-06 Identities = 189/242 (78%) Strand = Plus / Plus Query: 70 atggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctcaag 129 |||||| ||||||||||| | || || ||||||||| | || ||||||||||| | ||| Sbjct: 1 atggcgaggaagaagatcagagaatatgactccaagagacttctcaaggagcatttgaag 60 Query: 130 cgcctcgcaggcatcgacctccagatcctctccgcgcaggtgacacaatcaacggatttc 189 || || || || ||||| ||||| | ||| || ||||||||| |||| ||||||||| Sbjct: 61 cgtcttgctaatattgacctgcagattcgctctgctcaggtgacagaatctacggatttc 120 Query: 190 acggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacctgac 249 || ||| | | ||||||||| ||||||| ||||| | ||| | ||||| ||||| || Sbjct: 121 actgagttaaccaaccaggagtcatggctatcgtccacaaagctagttgtgaaaccggat 180 Query: 250 atgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcttgctcaa 309 ||||| ||||| || || ||||| ||||| | ||||| || || || ||||||||| || Sbjct: 181 atgctatttgggaaacgcgggaaaagtggtttggtagctctaaagctggatcttgctgaa 240 Query: 310 gt 311 || Sbjct: 241 gt 242
>gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana BAC F20B24 from chromosome I, complete sequence Length = 99416 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 376 acaacattcatagtcgagccatttgtgccacacgatcaagagtattatctctcaattgtg 435 |||||||||||||| || |||||||| |||||| || | |||||||||||| |||| Sbjct: 36621 acaacattcatagttgaaccatttgttccacacaatgaggagtattatctcaatgttgtc 36680 Query: 436 tcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgagattgaggag 495 || || |||||||||||| || || || || |||||||| || |||||||| |||||| Sbjct: 36681 tcggatcggcttggttgcagcataagcttttctgagtgtggaggaattgagatcgaggag 36740 Query: 496 aactgggacaaggt 509 |||||||||||||| Sbjct: 36741 aactgggacaaggt 36754 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 214 tggctctcgtcgatgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaag 273 ||||||||||| |||| |||| || |||||||||||| ||||||| |||||||| ||| Sbjct: 36380 tggctctcgtctgagaagctggtggtgaaacctgacatgttgtttggaaagcgtggcaag 36439 Query: 274 agtgg 278 ||||| Sbjct: 36440 agtgg 36444
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 344 aggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtgc 403 |||||||||||| |||||||| || || || || |||||||| || ||||| ||||||| Sbjct: 24344 aggtcgagatggagggatgtaaagcacctatcactacattcattgtggagccttttgtgc 24403 Query: 404 cacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagtt 463 | || |||||||| || || ||||| || || || || || ||||| ||||| || || | Sbjct: 24404 ctcatgatcaagaatactacctctctatagtatctgatagacttggatgcactataagct 24463 Query: 464 tctcagagtgtggtggtattgagattgaggagaactgggacaa 506 |||| || |||||||| ||||| || || ||||| |||||||| Sbjct: 24464 tctctgaatgtggtggcattgaaatagaagagaattgggacaa 24506 Score = 50.1 bits (25), Expect = 0.008 Identities = 115/145 (79%) Strand = Plus / Plus Query: 167 aggtgacacaatcaacggatttcacggagctttcaaaccaggagccatggctctcgtcga 226 |||||||| |||| ||||||||||| ||| | | ||||||||| ||||||| ||||| | Sbjct: 24091 aggtgacagaatctacggatttcactgagttaaccaaccaggagtcatggctatcgtcca 24150 Query: 227 tgaagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtggccttgtag 286 ||| | ||||| ||||| || ||||| ||||| || || ||||| ||||| | |||| Sbjct: 24151 caaagctagttgtgaaaccggatatgctatttgggaaacgcgggaaaagtggtttggtag 24210 Query: 287 ccctcaacctagatcttgctcaagt 311 | || || || ||||||||| |||| Sbjct: 24211 ctctaaagctggatcttgctgaagt 24235 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 70 atggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagca 122 |||||| ||||||||||| | || || ||||||||| | || ||||||||||| Sbjct: 23738 atggcgaggaagaagatcagagaatatgactccaagagacttctcaaggagca 23790
>ref|NM_104764.2| Arabidopsis thaliana ACLA-2 AT1G60810 (ACLA-2) mRNA, complete cds Length = 1457 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || ||||||||||| || || |||||||| Sbjct: 326 gaggtagagatgagtggatgcaaaggacccataacaacattcattgttgaaccatttgtc 385 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || |||||| ||||| ||||| || || || ||||| |||| ||||| Sbjct: 386 ccacacaatgaagagttctatcttaatattgtctctgatagacttggctgcagcattagc 445 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagac 515 || || |||||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 446 ttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 498
>gb|AY128741.1| Arabidopsis thaliana similar to ATP-citrate-lyase (At1g60810) mRNA, complete cds Length = 1339 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || ||||||||||| || || |||||||| Sbjct: 274 gaggtagagatgagtggatgcaaaggacccataacaacattcattgttgaaccatttgtc 333 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || |||||| ||||| ||||| || || || ||||| |||| ||||| Sbjct: 334 ccacacaatgaagagttctatcttaatattgtctctgatagacttggctgcagcattagc 393 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagac 515 || || |||||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 394 ttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 446
>gb|AY081273.1| Arabidopsis thaliana similar to ATP-citrate-lyase (At1g60810) mRNA, complete cds Length = 1457 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || ||||||||||| || || |||||||| Sbjct: 326 gaggtagagatgagtggatgcaaaggacccataacaacattcattgttgaaccatttgtc 385 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || |||||| ||||| ||||| || || || ||||| |||| ||||| Sbjct: 386 ccacacaatgaagagttctatcttaatattgtctctgatagacttggctgcagcattagc 445 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagac 515 || || |||||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 446 ttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 498
>emb|BX816254.1|CNS0AD98 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1390 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatgtaaggctccaattacaacattcatagtcgagccatttgtg 402 ||||| |||||| ||||||| || | || || ||||||||||| || || |||||||| Sbjct: 304 gaggtagagatgagtggatgcaaaggacccataacaacattcattgttgaaccatttgtc 363 Query: 403 ccacacgatcaagagtattatctctcaattgtgtcagacaggcttggttgcacaattagt 462 |||||| || |||||| ||||| ||||| || || || ||||| |||| ||||| Sbjct: 364 ccacacaatgaagagtcctatcttaatattgtctctgatagacttggctgcagcattagc 423 Query: 463 ttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagac 515 || || |||||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 424 ttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 476
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 60.0 bits (30), Expect = 9e-06 Identities = 108/134 (80%) Strand = Plus / Minus Query: 376 acaacattcatagtcgagccatttgtgccacacgatcaagagtattatctctcaattgtg 435 ||||||||||| || || |||||||| |||||| || |||||| ||||| ||||| Sbjct: 114459 acaacattcattgttgaaccatttgtcccacacaatgaagagttctatcttaatattgtc 114400 Query: 436 tcagacaggcttggttgcacaattagtttctcagagtgtggtggtattgagattgaggag 495 || || || ||||| |||| ||||| || || |||||||| || ||||| || |||||| Sbjct: 114399 tctgatagacttggctgcagcattagcttttcggagtgtggaggaattgacatcgaggag 114340 Query: 496 aactgggacaaggt 509 |||||||||||||| Sbjct: 114339 aactgggacaaggt 114326
>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008, complete sequence Length = 116223 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 232 ttggttgttaaacctgacatgctgtttggcaagcgtgggaagag 275 |||||||| |||||||||||| ||||||| |||||||| ||||| Sbjct: 100865 ttggttgtgaaacctgacatgttgtttgggaagcgtggcaagag 100908
>emb|AJ344108.1|LAL344108 Lupinus albus mRNA for ATP citrate lyase b-subunit (aclb gene) Length = 1617 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 460 agtttctcagagtgtggtggtattgagattgaggagaactgggacaaggttaagacaatc 519 ||||| ||||| ||||| || || || ||||| ||||||||||| ||||||||||| | Sbjct: 463 agtttttcagaatgtggaggaatcgaaattgaagagaactgggataaggttaagactgta 522 Query: 520 tttcttccaacag 532 ||| ||||||||| Sbjct: 523 tttgttccaacag 535 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 229 aagttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtgg 278 ||||||||||| |||||||| ||| | ||||| |||||||| || ||||| Sbjct: 232 aagttggttgtgaaacctgatatgttatttggaaagcgtggcaaaagtgg 281
>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE Length = 122251 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 232 ttggttgttaaacctgacatgctgtttggcaagcgtgggaagagtgg 278 |||||||| |||||||||||| | ||||| |||||||| || ||||| Sbjct: 79973 ttggttgtgaaacctgacatgttatttgggaagcgtggtaaaagtgg 79927
>gb|AC140340.3| Mus musculus BAC clone RP24-260O19 from chromosome 14, complete sequence Length = 168454 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 ctgggacaaggttaagacaat 518 ||||||||||||||||||||| Sbjct: 90594 ctgggacaaggttaagacaat 90614
>gb|AC112142.4| Mus musculus BAC clone RP23-4P23 from chromosome 14, complete sequence Length = 230847 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 ctgggacaaggttaagacaat 518 ||||||||||||||||||||| Sbjct: 200452 ctgggacaaggttaagacaat 200472
>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 ctgggacaaggttaagacaat 518 ||||||||||||||||||||| Sbjct: 298749 ctgggacaaggttaagacaat 298769
>ref|NM_111720.3| Arabidopsis thaliana alanine-glyoxylate transaminase/ pyridoxal phosphate binding / transaminase AT3G08860 mRNA, complete cds Length = 1712 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gccatggcgcggaagaagat 86 |||||||||||||||||||| Sbjct: 137 gccatggcgcggaagaagat 118
>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15, complete sequence Length = 197506 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 ttggttgcacaattagtttctcag 469 ||||||||||||||||||| |||| Sbjct: 63437 ttggttgcacaattagtttttcag 63460
>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence, complete sequence Length = 80381 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gccatggcgcggaagaagat 86 |||||||||||||||||||| Sbjct: 57522 gccatggcgcggaagaagat 57503
>emb|AL050335.32|HSJ190J20 Human DNA sequence from clone RP1-190J20 on chromosome 6p22.3-24.1 Contains the 5' end of a novel gene and a ribosomal protein L6 (RPL6) (TAXREB107) pseudogene, complete sequence Length = 189317 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gaggtcgagatgggtggatg 362 |||||||||||||||||||| Sbjct: 165556 gaggtcgagatgggtggatg 165575
>gb|AY099816.1| Arabidopsis thaliana putative aminotransferase (At3g08860) mRNA, complete cds Length = 1703 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gccatggcgcggaagaagat 86 |||||||||||||||||||| Sbjct: 136 gccatggcgcggaagaagat 117
>gb|AC093835.3| Homo sapiens BAC clone RP11-425A23 from 4, complete sequence Length = 197225 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctccaattacaacattcata 387 |||||||||||||||||||| Sbjct: 156128 ctccaattacaacattcata 156109
>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence Length = 202286 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ctcagagtgtggtggtattg 484 |||||||||||||||||||| Sbjct: 87965 ctcagagtgtggtggtattg 87984
>emb|BX957315.10| Zebrafish DNA sequence from clone CH211-254E15 in linkage group 19, complete sequence Length = 139744 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 ttgatgcatgtgctccattgattg 571 |||||||||||| ||||||||||| Sbjct: 129498 ttgatgcatgtggtccattgattg 129475
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete sequence Length = 194283 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ctcagagtgtggtggtattg 484 |||||||||||||||||||| Sbjct: 110417 ctcagagtgtggtggtattg 110436
>gb|AC163271.4| Mus musculus chromosome 7, clone RP24-353E13, complete sequence Length = 131940 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tttctcagagtgtggtggta 481 |||||||||||||||||||| Sbjct: 104752 tttctcagagtgtggtggta 104771
>gb|AC134330.3| Mus musculus BAC clone RP24-311K19 from 7, complete sequence Length = 142053 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tttctcagagtgtggtggta 481 |||||||||||||||||||| Sbjct: 120040 tttctcagagtgtggtggta 120059
>dbj|AP006713.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44N05, TM0544, complete sequence Length = 94570 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 gtggtggtattgagattgaggaga 496 |||||||| ||||||||||||||| Sbjct: 67240 gtggtggtgttgagattgaggaga 67263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,032,821 Number of Sequences: 3902068 Number of extensions: 4032821 Number of successful extensions: 77594 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77312 Number of HSP's gapped (non-prelim): 270 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
