ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37i04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82832.1|HVUDEC H.vulgare mRNA for uroporphyrinogen decarboxylase Length = 1208 Score = 844 bits (426), Expect = 0.0 Identities = 426/426 (100%) Strand = Plus / Plus Query: 163 gtggagaggccgcctgtctggctcatgaggcaggccgggaggtacatgaagagctaccaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gtggagaggccgcctgtctggctcatgaggcaggccgggaggtacatgaagagctaccaa 60 Query: 223 aatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgttgtt 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgttgtt 120 Query: 283 gagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcggat 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcggat 180 Query: 343 atccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggtcca 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggtcca 240 Query: 403 gtgatatatgatcccttaagaacagcagcggctgtgaacgaagtcagagaattcgttcca 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgatatatgatcccttaagaacagcagcggctgtgaacgaagtcagagaattcgttcca 300 Query: 463 gaggagtgggtcccttatgtaggacaggctttaaatttgctgcgaggagaggttaagaat 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaggagtgggtcccttatgtaggacaggctttaaatttgctgcgaggagaggttaagaat 360 Query: 523 gaagctgctgtgcttggttttgttggagctccctttaccttggcatcttattgcgtggag 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gaagctgctgtgcttggttttgttggagctccctttaccttggcatcttattgcgtggag 420 Query: 583 ggaggt 588 |||||| Sbjct: 421 ggaggt 426
>dbj|AK070859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065H03, full insert sequence Length = 1596 Score = 597 bits (301), Expect = e-167 Identities = 466/521 (89%) Strand = Plus / Plus Query: 68 tccgctgcagcgccgtcggagaggctgttgcggaggcggctgtggccgggacggcggagg 127 |||||||||||||||||||||||| | | |||||| |||| | || |||||||||||||| Sbjct: 166 tccgctgcagcgccgtcggagaggttatggcggagacggcggcggtcgggacggcggagg 225 Query: 128 agccgctgctagtgagcgcaatcaaggggaagaaggtggagaggccgcctgtctggctca 187 |||||||||| |||||||| |||||||||| |||||| ||||| ||||| |||||||||| Sbjct: 226 agccgctgctggtgagcgcgatcaaggggaggaaggtcgagagaccgccggtctggctca 285 Query: 188 tgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatatcctttgt 247 ||||||||||||||||||||||||||||||| ||| ||||| ||| | |||||| | Sbjct: 286 tgaggcaggccgggaggtacatgaagagctatcaattgctctgcgagcgacatccttcat 345 Query: 248 tccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaagg 307 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 346 tccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaagg 405 Query: 308 ttttcaagcctgatggagttatcttgttctcggatatccttactccacttcctgggatga 367 |||||||||| |||||||||||| ||||||| ||||||||||| || ||||||||||||| Sbjct: 406 ttttcaagcccgatggagttatcctgttctcagatatccttacaccgcttcctgggatga 465 Query: 368 acataccttttgacattgtgaaaggaaaaggtccagtgatatatgatcccttaagaacag 427 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 466 acataccttttgacattgtgaaaggaaaaggtccagtgatatttgatcccttgagaacag 525 Query: 428 cagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtcccttatgtaggac 487 |||| |||||||| || ||||||||||| |||||||||||||||||||| ||||| || | Sbjct: 526 cagctgctgtgaatgaggtcagagaatttgttccagaggagtgggtcccatatgttgggc 585 Query: 488 aggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgcttggttttgttg 547 |||||||||| | |||| | ||||||||| ||||||||||| ||| | || ||||||| Sbjct: 586 aggctttaaacattttgcgggaagaggttaacaatgaagctgccgtgttgggctttgttg 645 Query: 548 gagctccctttaccttggcatcttattgcgtggagggaggt 588 ||||||||||||| |||||||| ||||| || || |||||| Sbjct: 646 gagctccctttacattggcatcctattgtgttgaaggaggt 686
>gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (les22) mRNA, complete cds Length = 1663 Score = 565 bits (285), Expect = e-158 Identities = 464/521 (89%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 68 tccgctgcagcgccgtcggagaggctgttgcggaggcggctgtggccgggacggcggagg 127 ||||||||||||||||||||||||| || | ||||| ||| | ||| ||||||||| | Sbjct: 232 tccgctgcagcgccgtcggagaggcggtcgtggaggaggcc-tcgcccagacggcggaag 290 Query: 128 agccgctgctagtgagcgcaatcaaggggaagaaggtggagaggccgcctgtctggctca 187 |||||||||| ||||||||||||| |||| |||| | |||||||| || |||||||||| Sbjct: 291 agccgctgctggtgagcgcaatcagagggaggaag-tcgagaggccacccgtctggctca 349 Query: 188 tgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatatcctttgt 247 ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| || Sbjct: 350 tgaggcaggccgggaggtacatgaagagctaccaattgctctgcgagcggtatccttcgt 409 Query: 248 tccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaagg 307 |||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||| Sbjct: 410 tccgtgaaagatcagaaaatgtcgacctagttgttgagatctctttgcaaccatggaagg 469 Query: 308 ttttcaagcctgatggagttatcttgttctcggatatccttactccacttcctgggatga 367 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 470 ttttcaagcctgatggagtcatcttgttctcggacatccttactccacttcctgggatga 529 Query: 368 acataccttttgacattgtgaaaggaaaaggtccagtgatatatgatcccttaagaacag 427 |||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| | Sbjct: 530 acataccttttgacattgtgaagggaaaaggtccagtgatctatgatccattgagaacgg 589 Query: 428 cagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtcccttatgtaggac 487 |||| |||||||| |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 590 cagcagctgtgaatgaagtcagagaatttgttcctgaggagtgggtcccttatgtggggc 649 Query: 488 aggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgcttggttttgttg 547 ||||| | ||| | || || ||||||||| |||||||||||||| || |||||||||| Sbjct: 650 aggctctgaatattttgagacaagaggttaaaaatgaagctgctgtactaggttttgttg 709 Query: 548 gagctccctttaccttggcatcttattgcgtggagggaggt 588 ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 710 gagctccgtttaccttggcatcttattgtgtggaaggaggt 750
>gb|AY111127.1| Zea mays CL1743_1 mRNA sequence Length = 1602 Score = 543 bits (274), Expect = e-151 Identities = 460/521 (88%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 68 tccgctgcagcgccgtcggagaggctgttgcggaggcggctgtggccgggacggcggagg 127 ||||||||||||||||||||||||| || | ||||| ||| | ||| ||||||||| | Sbjct: 232 tccgctgcagcgccgtcggagaggcggtcgtggaggaggcc-tcgcccagacggcggaag 290 Query: 128 agccgctgctagtgagcgcaatcaaggggaagaaggtggagaggccgcctgtctggctca 187 |||||||||| ||||||||||||| |||| |||| | |||||||| || |||||||||| Sbjct: 291 agccgctgctggtgagcgcaatcagagggaggaag-tcgagaggccacccgtctggctca 349 Query: 188 tgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatatcctttgt 247 ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| || Sbjct: 350 tgaggcaggccgggaggtacatgaagagctaccaattgctctgcgagcggtatccttcgt 409 Query: 248 tccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaagg 307 |||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||| Sbjct: 410 tccgtgaaagatcagaaaatgtcgacctagttgttgagatctctttgcaaccatggaagg 469 Query: 308 ttttcaagcctgatggagttatcttgttctcggatatccttactccacttcctgggatga 367 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 470 ttttcaagcctgatggagtcatcttgttctcggacatccttactccacttcctgggatga 529 Query: 368 acataccttttgacattgtgaaaggaaaaggtccagtgatatatgatcccttaagaacag 427 |||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| | Sbjct: 530 acataccttttgacattgtgaagggaaaaggtccagtgatctatgatccattgagaacgg 589 Query: 428 cagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtcccttatgtaggac 487 |||| |||||||| |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 590 cagcagctgtgaatgaagtcagagaatttgttcctgaggagtgggtcccttatgtggggc 649 Query: 488 aggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgcttggttttgttg 547 ||||| | ||| | || || ||||||| |||||||||||| || |||||||||| Sbjct: 650 aggctctgaatattttgagacaagaggttnnnnntgaagctgctgtactaggttttgttg 709 Query: 548 gagctccctttaccttggcatcttattgcgtggagggaggt 588 ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 710 gagctccgtttaccttggcatcttattgtgtggaaggaggt 750
>gb|AF119232.1|AF119232 Oryza sativa uroporphyrinogen decarboxylase UROD-like mRNA sequence Length = 970 Score = 509 bits (257), Expect = e-141 Identities = 421/473 (89%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 117 gacggcggaggagccgctgctagtgagcgcaatcaaggggaagaaggtggagaggccgcc 176 ||||||||||||||| ||||| |||||||| |||||||||| |||||| || ||| || Sbjct: 3 gacggcggaggagcc-ctgctggtgagcgcgatcaaggggaggaaggtcgatgagccacc 61 Query: 177 tgtct-ggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgaga 235 |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 62 ggtcttggctcatgaggcaggccgggaggtacatgaagagctaccaattgctctgcgagc 121 Query: 236 aatatcctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgc 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122 ggtatccttcgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctac 181 Query: 296 agccatggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccac 355 | |||||||||||||||||||| |||||||||||| ||||||| ||||||||||| || | Sbjct: 182 aaccatggaaggttttcaagcccgatggagttatcctgttctcagatatccttacaccgc 241 Query: 356 ttcctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatatgatc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 242 ttcctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatttgatc 301 Query: 416 ccttaagaacagcagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtcc 475 |||| ||||||||||| |||| ||| || ||||||||||| ||||||||||||||||||| Sbjct: 302 ccttgagaacagcagctgctgcgaatgaggtcagagaatttgttccagaggagtgggtcc 361 Query: 476 cttatgtaggacaggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgc 535 | ||||| || ||||||||||| | |||| | ||||||||| ||||||||||| ||| Sbjct: 362 catatgttgggcaggctttaaacattttgcgggaagaggttaacaatgaagctgccgtgt 421 Query: 536 ttggttttgttggagctccctttaccttggcatcttattgcgtggagggaggt 588 | || |||||||||||||| |||||||||||||| ||||| || || |||||| Sbjct: 422 tgggctttgttggagctccgtttaccttggcatcctattgtgttgaaggaggt 474
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 240 bits (121), Expect = 4e-60 Identities = 160/173 (92%) Strand = Plus / Plus Query: 325 gttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacatt 384 |||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 12504787 gttatcctgttctcagatatccttacaccgcttcctgggatgaacataccttttgacatt 12504846 Query: 385 gtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaa 444 ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || Sbjct: 12504847 gtgaaaggaaaaggtccagtgatatttgatcccttgagaacagcagctgctgtgaatgag 12504906 Query: 445 gtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 497 ||||||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 12504907 gtcagagaatttgttccagaggagtgggtcccatatgttgggcaggctttaaa 12504959 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 327 tatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacattgt 386 |||| ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||| Sbjct: 12620107 tatcctgttctcagatatccttacaccgcttcctcggatgaacataccttttgacattgt 12620048 Query: 387 gaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaagt 446 ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 12620047 gaaaggaaaaggttcagtgatatttgatcccttgagaacagcagctgctgtgaatgaggt 12619988 Query: 447 cagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 497 ||||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 12619987 cagagaatttgttccagaggagtgggtcccgtatgttgggcaggctttaaa 12619937 Score = 153 bits (77), Expect = 8e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 97 gcggaggcggctgtggccgggacggcggaggagccgctgctagtgagcgcaatcaagggg 156 |||||| |||| | || |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 12503862 gcggagacggcggcggtcgggacggcggaggagccgctgctggtgagcgcgatcaagggg 12503921 Query: 157 aagaaggtggagaggccgcctgtctggctcatgaggcaggccgggaggtacatgaag 213 | |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12503922 aggaaggtcgagagaccgccggtctggctcatgaggcaggccgggaggtacatgaag 12503978 Score = 135 bits (68), Expect = 2e-28 Identities = 77/80 (96%) Strand = Plus / Plus Query: 247 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 306 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 12504514 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 12504573 Query: 307 gttttcaagcctgatggagt 326 ||||||||||| |||||||| Sbjct: 12504574 gttttcaagcccgatggagt 12504593 Score = 121 bits (61), Expect = 3e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 114 cgggacggcggaggagccgctgctagtgagcgcaatc-aaggggaagaaggtggagaggc 172 |||||||| ||||||||||||||| |||||||| ||| ||||||| |||||| ||||| | Sbjct: 12620956 cgggacggtggaggagccgctgctggtgagcgcgatcgaaggggaggaaggtcgagagac 12620897 Query: 173 cgcctgtctggctcatgaggcaggccgggaggtacatgaag 213 |||| |||||||| ||||||||||||||||||||||||||| Sbjct: 12620896 cgccggtctggcttatgaggcaggccgggaggtacatgaag 12620856 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 251 gtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaaggttt 310 |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 12620369 gtgaaagatcagaacttgttgaccttgttgttgaaatctctctacaaccatggaaggttt 12620310 Query: 311 tcaagcctgatggagt 326 ||| ||| |||||||| Sbjct: 12620309 tcacgcccgatggagt 12620294 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 512 aggttaagaatgaagctgctgtgcttggttttgttggagctccctttaccttggcatctt 571 ||||||| ||||||||||| ||| | || |||||||||||||||||||| |||||||| | Sbjct: 12505754 aggttaacaatgaagctgccgtgttgggctttgttggagctccctttacattggcatcct 12505813 Query: 572 attgcgtggagggaggt 588 |||| || || |||||| Sbjct: 12505814 attgtgttgaaggaggt 12505830 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 539 gttttgttggagctccctttaccttggcatcttattgcgtggagggaggt 588 |||||||||||||||||||||| |||||||| ||||| || || |||||| Sbjct: 12618537 gttttgttggagctccctttacgttggcatcctattgtgttgaaggaggt 12618488 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 55 ccgctcccctccatccgctgcagcgccgtcggag 88 ||||| ||| || ||||||||||||||||||||| Sbjct: 12621131 ccgctgcccgccgtccgctgcagcgccgtcggag 12621098 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tccgctgcagcgccgtcggag 88 ||||||||||||||||||||| Sbjct: 12503715 tccgctgcagcgccgtcggag 12503735
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 240 bits (121), Expect = 4e-60 Identities = 160/173 (92%) Strand = Plus / Minus Query: 325 gttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacatt 384 |||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 83154 gttatcctgttctcagatatccttacaccgcttcctgggatgaacataccttttgacatt 83095 Query: 385 gtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaa 444 ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || Sbjct: 83094 gtgaaaggaaaaggtccagtgatatttgatcccttgagaacagcagctgctgtgaatgag 83035 Query: 445 gtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 497 ||||||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 83034 gtcagagaatttgttccagaggagtgggtcccatatgttgggcaggctttaaa 82982 Score = 153 bits (77), Expect = 8e-34 Identities = 107/117 (91%) Strand = Plus / Minus Query: 97 gcggaggcggctgtggccgggacggcggaggagccgctgctagtgagcgcaatcaagggg 156 |||||| |||| | || |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 84079 gcggagacggcggcggtcgggacggcggaggagccgctgctggtgagcgcgatcaagggg 84020 Query: 157 aagaaggtggagaggccgcctgtctggctcatgaggcaggccgggaggtacatgaag 213 | |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84019 aggaaggtcgagagaccgccggtctggctcatgaggcaggccgggaggtacatgaag 83963 Score = 135 bits (68), Expect = 2e-28 Identities = 77/80 (96%) Strand = Plus / Minus Query: 247 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 306 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 83427 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 83368 Query: 307 gttttcaagcctgatggagt 326 ||||||||||| |||||||| Sbjct: 83367 gttttcaagcccgatggagt 83348 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 512 aggttaagaatgaagctgctgtgcttggttttgttggagctccctttaccttggcatctt 571 ||||||| ||||||||||| ||| | || |||||||||||||||||||| |||||||| | Sbjct: 82187 aggttaacaatgaagctgccgtgttgggctttgttggagctccctttacattggcatcct 82128 Query: 572 attgcgtggagggaggt 588 |||| || || |||||| Sbjct: 82127 attgtgttgaaggaggt 82111 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 tccgctgcagcgccgtcggag 88 ||||||||||||||||||||| Sbjct: 84226 tccgctgcagcgccgtcggag 84206
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 240 bits (121), Expect = 4e-60 Identities = 160/173 (92%) Strand = Plus / Plus Query: 325 gttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacatt 384 |||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 12501550 gttatcctgttctcagatatccttacaccgcttcctgggatgaacataccttttgacatt 12501609 Query: 385 gtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaa 444 ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || Sbjct: 12501610 gtgaaaggaaaaggtccagtgatatttgatcccttgagaacagcagctgctgtgaatgag 12501669 Query: 445 gtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 497 ||||||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 12501670 gtcagagaatttgttccagaggagtgggtcccatatgttgggcaggctttaaa 12501722 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 327 tatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacattgt 386 |||| ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||| Sbjct: 12616870 tatcctgttctcagatatccttacaccgcttcctcggatgaacataccttttgacattgt 12616811 Query: 387 gaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaagt 446 ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 12616810 gaaaggaaaaggttcagtgatatttgatcccttgagaacagcagctgctgtgaatgaggt 12616751 Query: 447 cagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 497 ||||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 12616750 cagagaatttgttccagaggagtgggtcccgtatgttgggcaggctttaaa 12616700 Score = 153 bits (77), Expect = 8e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 97 gcggaggcggctgtggccgggacggcggaggagccgctgctagtgagcgcaatcaagggg 156 |||||| |||| | || |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 12500625 gcggagacggcggcggtcgggacggcggaggagccgctgctggtgagcgcgatcaagggg 12500684 Query: 157 aagaaggtggagaggccgcctgtctggctcatgaggcaggccgggaggtacatgaag 213 | |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12500685 aggaaggtcgagagaccgccggtctggctcatgaggcaggccgggaggtacatgaag 12500741 Score = 135 bits (68), Expect = 2e-28 Identities = 77/80 (96%) Strand = Plus / Plus Query: 247 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 306 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 12501277 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 12501336 Query: 307 gttttcaagcctgatggagt 326 ||||||||||| |||||||| Sbjct: 12501337 gttttcaagcccgatggagt 12501356 Score = 121 bits (61), Expect = 3e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 114 cgggacggcggaggagccgctgctagtgagcgcaatc-aaggggaagaaggtggagaggc 172 |||||||| ||||||||||||||| |||||||| ||| ||||||| |||||| ||||| | Sbjct: 12617719 cgggacggtggaggagccgctgctggtgagcgcgatcgaaggggaggaaggtcgagagac 12617660 Query: 173 cgcctgtctggctcatgaggcaggccgggaggtacatgaag 213 |||| |||||||| ||||||||||||||||||||||||||| Sbjct: 12617659 cgccggtctggcttatgaggcaggccgggaggtacatgaag 12617619 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 251 gtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaaggttt 310 |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 12617132 gtgaaagatcagaacttgttgaccttgttgttgaaatctctctacaaccatggaaggttt 12617073 Query: 311 tcaagcctgatggagt 326 ||| ||| |||||||| Sbjct: 12617072 tcacgcccgatggagt 12617057 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 512 aggttaagaatgaagctgctgtgcttggttttgttggagctccctttaccttggcatctt 571 ||||||| ||||||||||| ||| | || |||||||||||||||||||| |||||||| | Sbjct: 12502517 aggttaacaatgaagctgccgtgttgggctttgttggagctccctttacattggcatcct 12502576 Query: 572 attgcgtggagggaggt 588 |||| || || |||||| Sbjct: 12502577 attgtgttgaaggaggt 12502593 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 539 gttttgttggagctccctttaccttggcatcttattgcgtggagggaggt 588 |||||||||||||||||||||| |||||||| ||||| || || |||||| Sbjct: 12615300 gttttgttggagctccctttacgttggcatcctattgtgttgaaggaggt 12615251 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 55 ccgctcccctccatccgctgcagcgccgtcggag 88 ||||| ||| || ||||||||||||||||||||| Sbjct: 12617894 ccgctgcccgccgtccgctgcagcgccgtcggag 12617861 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tccgctgcagcgccgtcggag 88 ||||||||||||||||||||| Sbjct: 12500478 tccgctgcagcgccgtcggag 12500498
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 327 tatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacattgt 386 |||| ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||| Sbjct: 56882 tatcctgttctcagatatccttacaccgcttcctcggatgaacataccttttgacattgt 56941 Query: 387 gaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaagt 446 ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 56942 gaaaggaaaaggttcagtgatatttgatcccttgagaacagcagctgctgtgaatgaggt 57001 Query: 447 cagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 497 ||||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 57002 cagagaatttgttccagaggagtgggtcccgtatgttgggcaggctttaaa 57052 Score = 121 bits (61), Expect = 3e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 114 cgggacggcggaggagccgctgctagtgagcgcaatc-aaggggaagaaggtggagaggc 172 |||||||| ||||||||||||||| |||||||| ||| ||||||| |||||| ||||| | Sbjct: 56033 cgggacggtggaggagccgctgctggtgagcgcgatcgaaggggaggaaggtcgagagac 56092 Query: 173 cgcctgtctggctcatgaggcaggccgggaggtacatgaag 213 |||| |||||||| ||||||||||||||||||||||||||| Sbjct: 56093 cgccggtctggcttatgaggcaggccgggaggtacatgaag 56133 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 251 gtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaaggttt 310 |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 56620 gtgaaagatcagaacttgttgaccttgttgttgaaatctctctacaaccatggaaggttt 56679 Query: 311 tcaagcctgatggagt 326 ||| ||| |||||||| Sbjct: 56680 tcacgcccgatggagt 56695 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 539 gttttgttggagctccctttaccttggcatcttattgcgtggagggaggt 588 |||||||||||||||||||||| |||||||| ||||| || || |||||| Sbjct: 58452 gttttgttggagctccctttacgttggcatcctattgtgttgaaggaggt 58501 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 55 ccgctcccctccatccgctgcagcgccgtcggag 88 ||||| ||| || ||||||||||||||||||||| Sbjct: 55858 ccgctgcccgccgtccgctgcagcgccgtcggag 55891
>ref|NM_129611.3| Arabidopsis thaliana uroporphyrinogen decarboxylase AT2G40490 mRNA, complete cds Length = 1473 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 310 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 369 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 370 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 429 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 430 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 489 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 490 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 530 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 640 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 689
>gb|AY142634.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase (At2g40490) mRNA, complete cds Length = 1216 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 211 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 270 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 271 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 330 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 331 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 390 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 391 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 431 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 541 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 590
>gb|AY035057.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase (At2g40490) mRNA, complete cds Length = 1470 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 297 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 356 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 357 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 416 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 417 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 476 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 477 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 517 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 627 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 676
>emb|BX820790.1|CNS0AA7W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH69ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1369 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 296 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 355 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 356 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 415 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 416 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 475 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 476 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 516 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 626 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 675
>emb|BX820062.1|CNS0AA6S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1433 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 310 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 369 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 370 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 429 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 430 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 489 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 490 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 530 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 640 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 689
>emb|BX819829.1|CNS0AA6W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZA06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1397 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 280 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 339 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 340 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 399 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 400 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 459 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 460 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 500 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 610 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 659
>emb|BX819769.1|CNS0AA6J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1428 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| |||||||| || ||||||||||||||||| || |||| |||||||||||| ||| Sbjct: 297 tggcttatgaggcaagctgggaggtacatgaagagttatcaaactctctgtgagaagtat 356 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 |||| ||| | || |||||||| |||| || ||||| || || || ||| |||||||| Sbjct: 357 ccttctttcagagatagatcagagaatgcagatcttgtggtggaaatttctttgcagcca 416 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 |||||||| || ||||| ||||| || || ||||||| || || || |||||| | || Sbjct: 417 tggaaggtgtttaagccagatggggtgattctgttctcagacattctcactccattgtct 476 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 477 ggaatgaacatacctttcgacattgttaaaggaaaaggtcc 517 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 511 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 560 ||||| || |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 627 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 676
>emb|X82833.1|NTUDEC N.tabacum mRNA for uroporphyrinogen decarboxylase Length = 1477 Score = 87.7 bits (44), Expect = 4e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 181 tggctcatgaggcaggccgggaggtacatgaagagctaccaaaatctctgtgagaaatat 240 ||||| ||||| || || |||||||| ||||||||||| ||| ||||| ||||| || Sbjct: 225 tggcttatgagacaagcagggaggtatatgaagagctatcaactcctctgcgagaagtac 284 Query: 241 cctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagcca 300 || ||||||||||| |||||||| || ||||| ||||| || || || ||||| || || Sbjct: 285 ccattgttccgtgatagatcagagaacgttgatcttgtggtagaaatttctctacaaccc 344 Query: 301 tggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccacttcct 360 ||||| || |||| ||||||||| || || || || || || || |||||||| ||| | Sbjct: 345 tggaaagtattcaggcctgatggggtcattttattttcagacattcttactcctctttca 404 Query: 361 gggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatatgatccctta 420 |||||||| || ||||| |||||| | || || || ||||| || |||| ||||||| | Sbjct: 405 gggatgaatatccctttcgacattataaaggggaagggtcctgtcatatttgatcccctg 464 Query: 421 agaacagc 428 |||||||| Sbjct: 465 agaacagc 472
>dbj|AB050117.1| Amaranthus tricolor UROD mRNA for uroporphyrinogen decarboxylase, partial cds Length = 573 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 364 atgaacataccttttgacattgtgaaaggaaaaggtcc 401 |||||||||||||||||||||||||||||||| ||||| Sbjct: 4 atgaacataccttttgacattgtgaaaggaaagggtcc 41 Score = 40.1 bits (20), Expect = 8.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 510 agaggttaagaatgaagctgctgtgcttggttttgttggagctccctttacc 561 ||||||| | ||| ||||||| || || ||||||||||| ||||| |||||| Sbjct: 150 agaggttgacaataaagctgcagttctcggttttgttggggctccttttacc 201
>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete sequence Length = 84675 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 359 ctgggatgaacataccttttgacattgtgaaaggaaaaggtcc 401 |||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 49261 ctggaatgaacatacctttcgacattgttaaaggaaaaggtcc 49219 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 220 caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 279 |||| |||||||||||| ||||||| ||| | || |||||||| |||| || ||||| Sbjct: 49495 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 49436 Query: 280 gttgagatctctctgcagccatggaaggttttcaagcctgatgg 323 || || || ||| |||||||||||||||| || ||||| ||||| Sbjct: 49435 gtggaaatttctttgcagccatggaaggtgtttaagccagatgg 49392 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 181 tggctcatgaggcaggccgggaggtacatgaag 213 ||||| |||||||| || ||||||||||||||| Sbjct: 49635 tggcttatgaggcaagctgggaggtacatgaag 49603 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 520 aatgaagctgctgtgcttggttttgttggagctccctttac 560 |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 48993 aatgaagccgctgttctgggatttgttggagctccatttac 48953
>gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete sequence Length = 120151 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 247 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 306 ||||| |||||||| ||||||||||| || || ||||| || || |||| || |||||| Sbjct: 29999 ttccgggaaagatctgaaaatgttgatctcgtggttgaaatttcattgcaaccgtggaag 29940 Query: 307 gttttcaagcctgatgg 323 |||||| |||||||||| Sbjct: 29939 gttttccagcctgatgg 29923 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 175 cctgtctggctcatgaggcaggccgggaggtacatgaag 213 ||||| ||||| |||||||| || ||||||||||||||| Sbjct: 30719 cctgtttggcttatgaggcaagctgggaggtacatgaag 30681
>gb|AC129507.9| Homo sapiens chromosome 17, clone RP11-1260E13, complete sequence Length = 199102 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 47 cccgccagccgctcccctccatccgctgcagc 78 |||||||||||| ||||||||||| ||||||| Sbjct: 55161 cccgccagccgcccccctccatcctctgcagc 55192
>gb|AC141424.3| Homo sapiens chromosome 17, clone RP13-803G22, complete sequence Length = 140126 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 47 cccgccagccgctcccctccatccgctgcagc 78 |||||||||||| ||||||||||| ||||||| Sbjct: 78234 cccgccagccgcccccctccatcctctgcagc 78203
>ref|NM_197415.1| Oryza sativa (japonica cultivar-group) putative arm repeat containing protein (OSJNBb0028C01.32), mRNA Length = 2156 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 ggccgggacggcggaggagccgctg 135 |||||||||||||||||||| |||| Sbjct: 322 ggccgggacggcggaggagctgctg 346
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 ggccgggacggcggaggagccgctg 135 |||||||||||||||||||| |||| Sbjct: 7588 ggccgggacggcggaggagctgctg 7612
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 ggccgggacggcggaggagccgctg 135 |||||||||||||||||||| |||| Sbjct: 30962 ggccgggacggcggaggagctgctg 30938
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 ggccgggacggcggaggagccgctg 135 |||||||||||||||||||| |||| Sbjct: 19746550 ggccgggacggcggaggagctgctg 19746574
>dbj|BS000079.1| Pan troglodytes chromosome 22 clone:RP43-047O12, map 22, complete sequences Length = 158933 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 ttttgacattgtgaaaggaaa 395 ||||||||||||||||||||| Sbjct: 24492 ttttgacattgtgaaaggaaa 24472
>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 ttttgacattgtgaaaggaaa 395 ||||||||||||||||||||| Sbjct: 205257 ttttgacattgtgaaaggaaa 205237
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 ggccgggacggcggaggagccgctg 135 |||||||||||||||||||| |||| Sbjct: 19757826 ggccgggacggcggaggagctgctg 19757850
>dbj|AP000953.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B697O17, LL56-APP region, complete sequence Length = 96067 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 ttttgacattgtgaaaggaaa 395 ||||||||||||||||||||| Sbjct: 27122 ttttgacattgtgaaaggaaa 27102
>emb|AL646048.22| Mouse DNA sequence from clone RP23-289C5 on chromosome X, complete sequence Length = 114787 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 ccacttcctgggatgaacata 372 ||||||||||||||||||||| Sbjct: 78387 ccacttcctgggatgaacata 78407
>gb|AF386526.1| Shigella flexneri 2a str. 301 virulence plasmid pCP301, complete sequence Length = 221618 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttggcatcttattgcgtgga 581 |||||||||||||||||||| Sbjct: 121569 ttggcatcttattgcgtgga 121588
>gb|AC150408.2| Branchiostoma floridae clone CH302-56A5, complete sequence Length = 180427 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 227 tctgtgagaaatatcctttgttccgtgaaaga 258 ||||||||||||||||| |||| |||||||| Sbjct: 3577 tctgtgagaaatatcctatgttttgtgaaaga 3546
>gb|DQ214977.1| Taeniopygia guttata clone 0064P0022F12 mRNA sequence Length = 891 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gaggctgttgcggaggcggc 107 |||||||||||||||||||| Sbjct: 679 gaggctgttgcggaggcggc 660
>gb|BC107462.1| Rattus norvegicus cDNA clone IMAGE:7454573 Length = 1390 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 ccgcgccggcgcaggcctcgcccg 50 |||||||||| ||||||||||||| Sbjct: 153 ccgcgccggcccaggcctcgcccg 130
>gb|AY692752.1| Saccharomyces cerevisiae clone FLH111189.01X YGL222C gene, complete cds Length = 528 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaggggaagaaggtggagag 170 |||||||||||||||||||| Sbjct: 262 aaggggaagaaggtggagag 243
>gb|AY563922.1| Brachystigma wrightii isolate brwr1 maturase K (matK) gene, complete cds; chloroplast Length = 2730 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cttgttgttgagatctctct 293 |||||||||||||||||||| Sbjct: 781 cttgttgttgagatctctct 762
>gb|AF531781.1| Pedicularis sylvatica trnK gene, intron; and maturase (matK) gene, complete cds; chloroplast genes for chloroplast products Length = 2450 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cttgttgttgagatctctct 293 |||||||||||||||||||| Sbjct: 761 cttgttgttgagatctctct 742
>gb|AY657796.1| Synthetic construct Peudomonas aeruginosa clone FLH045482.01F PA1956 gene, partial cds Length = 489 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 gcgccggcgcaggcctcgcc 48 |||||||||||||||||||| Sbjct: 404 gcgccggcgcaggcctcgcc 423
>ref|XM_710711.1| Candida albicans SC5314 regulator of filamentous growth and virulence Rfg1p (CaO19_10341), mRNA Length = 1809 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aatgttgaccttgttgttga 284 |||||||||||||||||||| Sbjct: 1732 aatgttgaccttgttgttga 1713
>ref|XM_710662.1| Candida albicans SC5314 regulator of filamentous growth and virulence Rfg1p (CaO19_2824), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aatgttgaccttgttgttga 284 |||||||||||||||||||| Sbjct: 1033 aatgttgaccttgttgttga 1014
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cggcgcaggcctcgcccgcc 52 |||||||||||||||||||| Sbjct: 358473 cggcgcaggcctcgcccgcc 358492
>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence Length = 165330 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 accttttgacattgtgaaaggaaa 395 ||||||||||||||||||| |||| Sbjct: 102488 accttttgacattgtgaaatgaaa 102465
>ref|XM_806416.1| Trypanosoma cruzi strain CL Brener peroxin 14 (Tc00.1047053504069.50) partial mRNA Length = 1110 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gaattcgttccagaggagtg 470 |||||||||||||||||||| Sbjct: 1090 gaattcgttccagaggagtg 1109
>gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosome 18, complete sequence Length = 184463 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 gctgcgaggagaggttaaga 520 |||||||||||||||||||| Sbjct: 134857 gctgcgaggagaggttaaga 134838
>gb|AC124567.4| Mus musculus BAC clone RP23-145E22 from 6, complete sequence Length = 218924 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ctctgtgagaaatatccttt 245 |||||||||||||||||||| Sbjct: 73586 ctctgtgagaaatatccttt 73567
>ref|XM_883627.1| Candida albicans SC5314 hypothetical protein (CaJ7.0107) partial mRNA Length = 789 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 atgttgaccttgttgttgag 285 |||||||||||||||||||| Sbjct: 690 atgttgaccttgttgttgag 671
>ref|XM_715226.1| Candida albicans SC5314 hypothetical protein (CaO19.7025) partial mRNA Length = 789 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 atgttgaccttgttgttgag 285 |||||||||||||||||||| Sbjct: 690 atgttgaccttgttgttgag 671
>ref|XM_715227.1| Candida albicans SC5314 hypothetical protein (CaO19.7026) partial mRNA Length = 417 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 atgttgaccttgttgttgag 285 |||||||||||||||||||| Sbjct: 281 atgttgaccttgttgttgag 262
>emb|AL591398.2| Human DNA sequence from clone RP11-81C12 on chromosome X Contains a pseudogene similar to part of mothers against decapentaplegic (MAD) homolog (Drosophila) interacting protein receptor activation anchor (MADHIP), complete sequence Length = 89973 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 aaaatctctgtgagaaatat 240 |||||||||||||||||||| Sbjct: 76717 aaaatctctgtgagaaatat 76698
>emb|AL590628.6| Human DNA sequence from clone RP11-252O7 on chromosome 10 Contains the 3' end of the ADD3 gene for adducin 3 (gamma) and a small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene, complete sequence Length = 113797 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gtgaaaggaaaaggtccagt 404 |||||||||||||||||||| Sbjct: 22999 gtgaaaggaaaaggtccagt 22980
>emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chromosome 13 Contains part of the gene for zizimin1 (KIAA1085) and a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 80803 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 tctgcagccatggaaggttt 310 |||||||||||||||||||| Sbjct: 45021 tctgcagccatggaaggttt 45040
>gb|AC145291.2| Homo sapiens chromosome 8, clone XXfos-82799H6, complete sequence Length = 41721 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cgcaggcctcgcccgccagc 55 |||||||||||||||||||| Sbjct: 2381 cgcaggcctcgcccgccagc 2400
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence Length = 203953 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 aaaatctctgtgagaaatat 240 |||||||||||||||||||| Sbjct: 131605 aaaatctctgtgagaaatat 131586
>emb|AL391753.1|SFPWR100 Shigella flexneri virulence plasmid pWR100: from 1 to 213494 Length = 213494 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttggcatcttattgcgtgga 581 |||||||||||||||||||| Sbjct: 116905 ttggcatcttattgcgtgga 116924
>gb|AC110280.8| Homo sapiens chromosome 8, clone CTD-3232M19, complete sequence Length = 91099 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgcaggcctcgcccgccagc 55 |||||||||||||||||||| Sbjct: 58426 cgcaggcctcgcccgccagc 58407
>ref|XM_927478.1| PREDICTED: Homo sapiens similar to Basic helix-loop-helix transcription factor scleraxis (LOC642876), mRNA Length = 999 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgcaggcctcgcccgccagc 55 |||||||||||||||||||| Sbjct: 470 cgcaggcctcgcccgccagc 451
>ref|XM_926116.1| PREDICTED: Homo sapiens similar to Basic helix-loop-helix transcription factor scleraxis (LOC642658), mRNA Length = 999 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgcaggcctcgcccgccagc 55 |||||||||||||||||||| Sbjct: 470 cgcaggcctcgcccgccagc 451
>tpg|BK000280.1| TPA: TPA_exp: Homo sapiens class II bHLH protein scleraxis (SCX) gene, complete cds Length = 2590 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgcaggcctcgcccgccagc 55 |||||||||||||||||||| Sbjct: 957 cgcaggcctcgcccgccagc 938
>gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid pWR501, complete plasmid sequence Length = 221851 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttggcatcttattgcgtgga 581 |||||||||||||||||||| Sbjct: 114594 ttggcatcttattgcgtgga 114613
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cgcatgacaacccgcgccggcgca 39 |||||||| ||||||||||||||| Sbjct: 16477499 cgcatgaccacccgcgccggcgca 16477522
>gb|AF330198.1|AF330198 Candida albicans regulator of filamentous growth and virulence Rfg1 (rfg1) gene, complete cds Length = 3387 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aatgttgaccttgttgttga 284 |||||||||||||||||||| Sbjct: 1866 aatgttgaccttgttgttga 1847
>gb|AC022415.5|AC022415 Homo sapiens chromosome 19 clone CTC-359D24, complete sequence Length = 180510 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ctcgcccgccagccgctcccctcc 66 |||||||||||||||||| ||||| Sbjct: 28933 ctcgcccgccagccgctcacctcc 28956
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aggcctcgcccgccagccgc 58 |||||||||||||||||||| Sbjct: 6352725 aggcctcgcccgccagccgc 6352744
>gb|AE004622.1| Pseudomonas aeruginosa PAO1, section 183 of 529 of the complete genome Length = 10163 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gcgccggcgcaggcctcgcc 48 |||||||||||||||||||| Sbjct: 4662 gcgccggcgcaggcctcgcc 4643
>dbj|AP004613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1123_G09 Length = 107491 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cgcatgacaacccgcgccggcgca 39 |||||||| ||||||||||||||| Sbjct: 85096 cgcatgaccacccgcgccggcgca 85119
>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete sequence Length = 144566 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 atcagaaaatgttgaccttg 277 |||||||||||||||||||| Sbjct: 29462 atcagaaaatgttgaccttg 29481
>gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ctctgtgagaaatatccttt 245 |||||||||||||||||||| Sbjct: 4678 ctctgtgagaaatatccttt 4659
>dbj|AK119355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-F11, full insert sequence Length = 2752 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cgcatgacaacccgcgccggcgca 39 |||||||| ||||||||||||||| Sbjct: 169 cgcatgaccacccgcgccggcgca 192
>emb|Z72744.1|SCYGL222C S.cerevisiae chromosome VII reading frame ORF YGL222c Length = 1060 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaggggaagaaggtggagag 170 |||||||||||||||||||| Sbjct: 560 aaggggaagaaggtggagag 579
>dbj|AP003721.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-881M11, complete sequence Length = 201460 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccagccgctcccctccatcc 70 |||||||||||||||||||| Sbjct: 107228 ccagccgctcccctccatcc 107247
>emb|AL163612.5|CNS01RII Human chromosome 14 DNA sequence BAC R-346L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgttgaccttgttgttgaga 286 |||||||||||||||||||| Sbjct: 62360 tgttgaccttgttgttgaga 62379
>gb|AC003689.1|AC003689 Homo sapiens Chromosome 11q12.2 PAC clone pDJ1081b4 containing human mRNA for T-cell glycoprotein CD6, complete sequence Length = 137693 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccagccgctcccctccatcc 70 |||||||||||||||||||| Sbjct: 39321 ccagccgctcccctccatcc 39340
>dbj|D50601.1|SHFORF Shigella sonnei genes for 26 ORFs, complete cds Length = 20323 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttggcatcttattgcgtgga 581 |||||||||||||||||||| Sbjct: 5808 ttggcatcttattgcgtgga 5827
>gb|U94325.1|FRU94325 Fugu rubripes Tuple1/HirA gene, complete cds Length = 9861 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 ggttaagaatgaagctgctg 532 |||||||||||||||||||| Sbjct: 549 ggttaagaatgaagctgctg 568
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 atgttgaccttgttgttgag 285 |||||||||||||||||||| Sbjct: 188123 atgttgaccttgttgttgag 188142
>emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chromosome X, complete sequence Length = 166399 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 aaaatctctgtgagaaatat 240 |||||||||||||||||||| Sbjct: 82768 aaaatctctgtgagaaatat 82749
>gb|CP000035.1| Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence Length = 182726 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttggcatcttattgcgtgga 581 |||||||||||||||||||| Sbjct: 143662 ttggcatcttattgcgtgga 143681
>gb|CP000039.1| Shigella sonnei Ss046 plasmid pSS_046, complete sequence Length = 214396 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttggcatcttattgcgtgga 581 |||||||||||||||||||| Sbjct: 94790 ttggcatcttattgcgtgga 94809
>dbj|D89801.1| Mus musculus Ring3 gene, complete cds Length = 10222 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcctcgcccgccagccgctcccc 63 ||||||||||||| |||||||||| Sbjct: 3479 ggcctcgcccgcccgccgctcccc 3456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,310,889 Number of Sequences: 3902068 Number of extensions: 5310889 Number of successful extensions: 113530 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112995 Number of HSP's gapped (non-prelim): 522 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
